ID:

dan-mir-311a

 Coordinate:

scaffold_13266:4132931-4133008 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.4 -36.0 -35.9

Flybase annnotation

utr3 [utr3_minus_3275]; utr3 [utr3_minus_3795]; pre_miRNA [Dana\mir-311a-RM]; miRNA [Dana\miR-311a-RA]; pre_miRNA [Dana\mir-310-RM]; utr3 [utr3_minus_3794]

No Repeatable elements found

Sense Strand Reads

TAGATATTATACGAACAGCAGCGATCGCTATCTGAGAGAAATATTTGTTGCCAGATTATCTTCAGGACGGTATTTGTGTCAATATGGATATTTCAAACATATTGCACTTATACCGGCCTGATGATCTCCGGCGCTCGTCATCTGTGACTAAAAGTGCGAAAATAGCAAAACATAAACA

************************************************.(((.((..(((.(((((.((((((..(((.(((((((...........))))))))))..)))))).))))).))).)).)))....****************************************** 		Read size # Mismatch Hit Count Total Norm Total M058

embryo

 M044

female body

 V039

embryo

 V105

male body		 V055

head

 V106

head
...................................................................................................TATTGCACTTATACCGGCCTGA......................................................... 22 0 1 104879.00 104879 89224 12507 3069 31 29 19
...................................................................................................TATTGCACTTATACCGGCCTGAA........................................................ 23 1 1 13773.00 13773 12489 1049 232 0 1 2
...................................................................................................TATTGCACTTATACCGGCCTGAAA....................................................... 24 2 1 8865.00 8865 7771 1007 87 0 0 0
...................................................................................................TATTGCACTTATACCGGCC............................................................ 19 0 1 8002.00 8002 7984 9 9 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTG.......................................................... 21 0 1 6004.00 6004 4440 1265 280 8 5 6
...................................................................................................TGTTGCACTTATACCGGCCTGA......................................................... 22 1 1 4893.00 4893 4887 5 0 0 1 0
...................................................................................................TACTGCACTTATACCGGCCTGA......................................................... 22 1 1 2894.00 2894 2880 9 5 0 0 0
....................................................................................................ATTGCACTTATACCGGCCTGA......................................................... 21 0 1 1128.00 1128 338 785 5 0 0 0
...................................................................................................TATGGCACTTATACCGGCCTGA......................................................... 22 1 1 1082.00 1082 1075 0 6 0 0 1
...................................................................................................TATCGCACTTATACCGGCCTGA......................................................... 22 1 1 960.00 960 950 5 5 0 0 0
...................................................................................................TTTTGCACTTATACCGGCCTGA......................................................... 22 1 1 810.00 810 808 1 1 0 0 0
...................................................................................................TATTGCACTTATACCGGCCT........................................................... 20 0 1 775.00 775 585 152 37 0 0 1
...................................................................................................TGTTGCACTTATACCGGCCTGAA........................................................ 23 2 1 705.00 705 705 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGAAAA...................................................... 25 2 1 695.00 695 473 208 13 0 1 0
...................................................................................................TATTGCACTTATACCGGCCTGAT........................................................ 23 0 1 560.00 560 493 54 7 5 0 1
...................................................................................................TATTGCACTTCTACCGGCCTGA......................................................... 22 1 1 548.00 548 543 0 5 0 0 0
...............................................................AGGACGGTATTTGTGTCAATATG............................................................................................ 23 0 1 527.00 527 260 176 52 31 2 6
...................................................................................................TATAGCACTTATACCGGCCTGA......................................................... 22 1 1 514.00 514 511 0 2 0 1 0
...................................................................................................TATTGCACGTATACCGGCCTGA......................................................... 22 1 1 479.00 479 5 472 2 0 0 0
...................................................................................................TATTGCACTTATACAGGCCTGA......................................................... 22 1 1 466.00 466 464 0 2 0 0 0
...................................................................................................TGTTGCACTTATACCGGCCTGAAA....................................................... 24 3 1 417.00 417 417 0 0 0 0 0
...................................................................................................TACTGCACTTATACCGGCCTGAA........................................................ 23 2 1 375.00 375 375 0 0 0 0 0
...................................................................................................TGTTGCACTTATACCGGCC............................................................ 19 1 1 365.00 365 365 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGC......................................................... 22 1 1 365.00 365 312 14 39 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGT......................................................... 22 1 1 355.00 355 270 51 30 2 2 0
...................................................................................................TATTGCACTTATACCGGCCTGAC........................................................ 23 1 1 312.00 312 302 9 1 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTTA......................................................... 22 1 1 298.00 298 139 1 157 0 1 0
...................................................................................................GATTGCACTTATACCGGCCTGA......................................................... 22 1 1 287.00 287 247 35 5 0 0 0
...................................................................................................TATTGCACATTCACCGGCCTGA......................................................... 22 3 2 283.50 567 37 522 7 0 0 1
...................................................................................................TACTGCACTTATACCGGCCTGAAA....................................................... 24 3 1 270.00 270 270 0 0 0 0 0
..................................................................................................CTATTGCACTTATACCGGCCTGA......................................................... 23 1 1 257.00 257 214 40 3 0 0 0
...................................................................................................TATTGCACTTATCCCGGCCTGA......................................................... 22 1 1 238.00 238 236 0 2 0 0 0
...................................................................................................TATTGCAATTATACCGGCCTGA......................................................... 22 1 1 229.00 229 224 2 3 0 0 0
...................................................................................................CATTGCACTTATACCGGCCTGA......................................................... 22 1 1 223.00 223 207 10 6 0 0 0
...................................................................................................TATTGCACTTATACCTGCCTGA......................................................... 22 1 1 221.00 221 150 5 64 2 0 0
...............................................................AGGACGGTATTTGTGTCAATAT............................................................................................. 22 0 1 205.00 205 172 18 12 3 0 0
...................................................................................................TGTTGCACTTATACCGGCCTG.......................................................... 21 1 1 199.00 199 198 1 0 0 0 0
...................................................................................................TATTGCACATATACCGGCCTGA......................................................... 22 1 1 193.00 193 5 188 0 0 0 0
...................................................................................................TATTTCACTTATACCGGCCTGA......................................................... 22 1 1 189.00 189 173 4 12 0 0 0
...................................................................................................AATTGCACTTATACCGGCCTGA......................................................... 22 1 1 186.00 186 170 13 3 0 0 0
...................................................................................................TACTGCACTTATACCGGCCTG.......................................................... 21 1 1 174.00 174 173 0 1 0 0 0
...................................................................................................TATTGCACCTATACCGGCCTGA......................................................... 22 1 1 167.00 167 69 94 4 0 0 0
...................................................................................................TATTGCACTTATACCGGAC............................................................ 19 1 1 159.00 159 159 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCC........................................................... 20 1 1 159.00 159 157 1 1 0 0 0
....................................................................................................ATTGCACTTATACCGGCCTGAA........................................................ 22 1 1 147.00 147 81 64 2 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGAG........................................................ 23 1 1 146.00 146 121 20 3 1 0 1
...................................................................................................TATGGCACTTATACCGGCCTGAA........................................................ 23 2 1 143.00 143 143 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGTCCTGA......................................................... 22 1 1 125.00 125 59 6 57 0 2 1
...................................................................................................TATTGGACTTATACCGGCCTGA......................................................... 22 1 1 123.00 123 123 0 0 0 0 0
....................................................................................................ATTGCACTTATACCGGCCTGAAA....................................................... 23 2 1 122.00 122 57 65 0 0 0 0
...................................................................................................TTTTGCACTTATACCGGCCTGAA........................................................ 23 2 1 119.00 119 119 0 0 0 0 0
.....................................................................................................TTGCACTTATACCGGCCTGA......................................................... 20 0 1 117.00 117 81 36 0 0 0 0
...................................................................................................TATCGCACTTATACCGGCCTGAA........................................................ 23 2 1 116.00 116 116 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGAAT....................................................... 24 2 1 114.00 114 108 6 0 0 0 0
...................................................................................................TATTGCGCTTATACCGGCCTGA......................................................... 22 1 1 105.00 105 92 5 8 0 0 0
...................................................................................................TATGGCACTTATACCGGCCTGAAA....................................................... 24 3 1 99.00 99 99 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGG......................................................... 22 1 1 98.00 98 59 32 7 0 0 0
...................................................................................................TATTGCACTTATACCGGCCCGA......................................................... 22 1 1 97.00 97 80 8 9 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGAAAAA..................................................... 26 3 1 95.00 95 36 58 1 0 0 0
...................................................................................................TACTGCACTTATACCGGCC............................................................ 19 1 1 92.00 92 92 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTAA......................................................... 22 1 1 92.00 92 87 1 4 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGAAC....................................................... 24 2 1 92.00 92 79 8 5 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGAAG....................................................... 24 1 1 88.00 88 72 13 2 0 0 1
....................................................................................................ATTGCACTTATACCGGCCTG.......................................................... 20 0 1 83.00 83 13 69 1 0 0 0
...................................................................................................TATTGCACTTATCCAGGCCTGA......................................................... 22 2 1 81.00 81 81 0 0 0 0 0
...................................................................................................TTTTGCACTTATACCGGCC............................................................ 19 1 1 81.00 81 81 0 0 0 0 0
...................................................................................................TATTGCACTTCTACCGGCCTGAA........................................................ 23 2 1 80.00 80 80 0 0 0 0 0
...................................................................................................TATTGCACTTACACCGGCCTGA......................................................... 22 1 1 80.00 80 73 3 4 0 0 0
...................................................................................................TATCGCACTTATACCGGCCTGAAA....................................................... 24 3 1 79.00 79 79 0 0 0 0 0
...................................................................................................TATAGCACTTATACCGGCCTGAA........................................................ 23 2 1 78.00 78 78 0 0 0 0 0
...................................................................................................TATTGCACTTATACCAGCCTGA......................................................... 22 1 1 72.00 72 48 8 15 1 0 0
...................................................................................................TATTGCACTTCTACCGGCC............................................................ 19 1 1 72.00 72 72 0 0 0 0 0
...............................................................ATGACGGTATTTGTGTCAATATG............................................................................................ 23 1 1 71.00 71 71 0 0 0 0 0
...................................................................................................TATTGCACTTATACTGGCCTGA......................................................... 22 1 1 69.00 69 61 5 3 0 0 0
...................................................................................................TATTGCACTTATACAGGCCTGAA........................................................ 23 2 1 66.00 66 66 0 0 0 0 0
...................................................................................................TGCTGCACTTATACCGGCCTGA......................................................... 22 2 1 66.00 66 66 0 0 0 0 0
...................................................................................................TATGGCACTTATACCGGCCTG.......................................................... 21 1 1 66.00 66 66 0 0 0 0 0
...................................................................................................TATTGCACTTATATCGGCCTGA......................................................... 22 1 1 64.00 64 56 3 5 0 0 0
...................................................................................................TATTGTACTTATACCGGCCTGA......................................................... 22 1 1 60.00 60 52 4 4 0 0 0
...................................................................................................TATTGCACTTATACCGACCTGA......................................................... 22 1 1 60.00 60 49 3 8 0 0 0
...................................................................................................TATTGCACGTATACCGGCCTG.......................................................... 21 1 1 59.00 59 0 58 1 0 0 0
...................................................................................................TATTGCACTTATACCGGCTTGA......................................................... 22 1 1 59.00 59 58 0 1 0 0 0
...................................................................................................TATTGCACTTCTACCGGCCTGAAA....................................................... 24 3 1 58.00 58 58 0 0 0 0 0
...................................................................................................TATCGCACTTATACCGGCC............................................................ 19 1 1 56.00 56 56 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGCCCTGA......................................................... 22 1 1 54.00 54 35 3 16 0 0 0
...................................................................................................TATTGCACGTATACCGGCCTGAAA....................................................... 24 3 1 51.00 51 0 51 0 0 0 0
...................................................................................................TATAGCACTTATACCGGCCTGAAA....................................................... 24 3 1 51.00 51 51 0 0 0 0 0
...................................................................................................TATCGCACTTATACCGGCCTG.......................................................... 21 1 1 50.00 50 49 0 1 0 0 0
...................................................................................................TATTGCACTTATACAGGCCTGAAA....................................................... 24 3 1 50.00 50 50 0 0 0 0 0
..................................................................................................CTATTGCACTTATACCGGCCTGAAA....................................................... 25 3 1 49.00 49 42 7 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGCA........................................................ 23 2 1 47.00 47 34 1 12 0 0 0
..................................................................................................CTATTGCACTTATACCGGCCTGAA........................................................ 24 2 1 44.00 44 43 1 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCA........................................................... 20 1 1 44.00 44 35 3 6 0 0 0
...................................................................................................TATTGCACTTATACCGGCCGGA......................................................... 22 1 1 43.00 43 38 3 2 0 0 0
...................................................................................................TATTGCACTTATACCGGTCTGA......................................................... 22 1 1 43.00 43 35 2 5 0 1 0
...................................................................................................TATTGCACTTATACCGGCCTGATA....................................................... 24 1 1 43.00 43 37 3 1 0 2 0
...................................................................................................TATTGCACTCATACCGGCCTGA......................................................... 22 1 1 42.00 42 39 2 1 0 0 0
...............................................................ATGACGGTATTTGTGTCAATAT............................................................................................. 22 1 1 42.00 42 42 0 0 0 0 0
...................................................................................................TATGGCACTTATACCGGCC............................................................ 19 1 1 41.00 41 41 0 0 0 0 0
...................................................................................................TATTGCACGTATACCGGCCTGAA........................................................ 23 2 1 40.00 40 0 39 1 0 0 0
...................................................................................................TATTGCAATTATACCGGCCTGAA........................................................ 23 2 1 39.00 39 38 0 1 0 0 0
....................................................................................................ATTGCACTGATACCGGCCTGA......................................................... 21 1 1 39.00 39 0 39 0 0 0 0
...................................................................................................TTTTGCACTTATACCGGCCTGAAA....................................................... 24 3 2 38.00 76 76 0 0 0 0 0
...................................................................................................TATTACACTTATACCGGCCTGA......................................................... 22 1 1 38.00 38 32 2 4 0 0 0
...................................................................................................TTTTGCACTTATACCGGCCTG.......................................................... 21 1 1 37.00 37 37 0 0 0 0 0
...................................................................................................TATTGCACTTATACCCGCCTGA......................................................... 22 1 1 37.00 37 5 3 28 0 1 0
...................................................................................................TATTGCACTTATACCGGCCTA.......................................................... 21 1 1 37.00 37 29 8 0 0 0 0
....................................................................................................ATTGCACTTATACCGGCC............................................................ 18 0 1 37.00 37 37 0 0 0 0 0
...............................................................AGGACGGTATTTGTGTCAATATA............................................................................................ 23 1 1 36.00 36 25 6 5 0 0 0
...................................................................................................GATTGCACTTATACCGGCCTGAA........................................................ 23 2 1 36.00 36 33 2 1 0 0 0
...................................................................................................TATTGCACTTATACCGGC............................................................. 18 0 1 35.00 35 26 2 4 1 2 0
...............................................................AGGACGGTATTTGTGTCAATA.............................................................................................. 21 0 1 35.00 35 23 4 5 1 0 2
..................................................................................................CGATTGCACTTATACCGGCCTGA......................................................... 23 2 1 35.00 35 35 0 0 0 0 0
...................................................................................................TATTGCACTTATCCCGGCCTGAA........................................................ 23 2 1 35.00 35 35 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGACA....................................................... 24 2 1 35.00 35 30 2 3 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTT.......................................................... 21 1 1 34.00 34 25 4 5 0 0 0
.....................................................................................................TTGCACTTATACCGGCCTGAAA....................................................... 22 2 1 32.00 32 27 4 1 0 0 0
...................................................................................................TATTGCACTTCTACCGGCCTG.......................................................... 21 1 1 32.00 32 32 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTCA......................................................... 22 1 1 31.00 31 14 3 14 0 0 0
...................................................................................................TATTGCACTTATGCCGGCCTGA......................................................... 22 1 1 31.00 31 24 7 0 0 0 0
...................................................................................................TACTGCACTTATCCCGGCCTGA......................................................... 22 2 1 31.00 31 30 0 1 0 0 0
...................................................................................................TATTGCACTTACACAGGCCTGA......................................................... 22 2 1 31.00 31 31 0 0 0 0 0
....................................................................................................AGTGCACTTATACCGGCCTGA......................................................... 21 1 1 30.00 30 30 0 0 0 0 0
...................................................................................................CATTGCACTTATACCGGCCTGAA........................................................ 23 2 1 30.00 30 30 0 0 0 0 0
...................................................................................................TGTTGCACTTATACCGGCCT........................................................... 20 1 1 29.00 29 28 0 1 0 0 0
...................................................................................................TGTTGCACTTATACAGGCCTGA......................................................... 22 2 1 29.00 29 29 0 0 0 0 0
...................................................................................................TATAGCACTTATACCGGCC............................................................ 19 1 1 29.00 29 29 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTTAA........................................................ 23 2 1 29.00 29 17 0 12 0 0 0
...................................................................................................TAGTGCACTTATACCGGCCTGA......................................................... 22 1 1 28.00 28 21 2 5 0 0 0
...................................................................................................TACTGCACTTATACAGGCCTGA......................................................... 22 2 1 28.00 28 28 0 0 0 0 0
................................................................GGACGGTATTTGTGTCAATATG............................................................................................ 22 0 1 28.00 28 1 27 0 0 0 0
...................................................................................................TGTTGCACTTCTACCGGCCTGA......................................................... 22 2 1 28.00 28 28 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTAAA........................................................ 23 2 1 27.00 27 24 2 1 0 0 0
...................................................................................................TATAGCACTTATACCGGCCTG.......................................................... 21 1 1 26.00 26 26 0 0 0 0 0
...................................................................................................TATTGCACTTATACAGGCCTG.......................................................... 21 1 1 26.00 26 26 0 0 0 0 0
...................................................................................................TGTTGCAATTATACCGGCCTGA......................................................... 22 2 1 26.00 26 26 0 0 0 0 0
.....................................................................................................TTGCACTTATACCGGCCTGAA........................................................ 21 1 1 26.00 26 20 5 1 0 0 0
...................................................................................................TACTGCACTTATACCGGCCTGC......................................................... 22 2 1 25.00 25 25 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGTA........................................................ 23 2 1 25.00 25 10 4 11 0 0 0
...................................................................................................TATTGCACTTATACCGGCCAGA......................................................... 22 1 1 25.00 25 24 0 1 0 0 0
...................................................................................................TATTTCACTTATACCGGCCTGAA........................................................ 23 2 1 25.00 25 25 0 0 0 0 0
...................................................................................................TATTGCACATATACCGGCCTGAAA....................................................... 24 3 1 24.00 24 0 23 1 0 0 0
...................................................................................................AATTGCACTTATACCGGCCTGAA........................................................ 23 2 1 24.00 24 24 0 0 0 0 0
...................................................................................................TATTGCACTTGTACCGGCCTGA......................................................... 22 1 1 23.00 23 18 3 2 0 0 0
...................................................................................................GATTGCACTTATACCGGCCTG.......................................................... 21 1 1 23.00 23 19 4 0 0 0 0
......................................................................................................TGCACTTATACCGGCCTGA......................................................... 19 0 1 22.00 22 14 8 0 0 0 0
...................................................................................................CATTGCACTTATACCGGCCTGAAA....................................................... 24 3 1 22.00 22 20 2 0 0 0 0
...................................................................................................TATTGCACGTTCACCGGCCTGA......................................................... 22 3 1 22.00 22 0 22 0 0 0 0
...................................................................................................TACTGCACTTATACCGGCCTGAT........................................................ 23 1 1 22.00 22 22 0 0 0 0 0
...............................................................AGGTCGGTATTTGTGTCAATATG............................................................................................ 23 1 1 22.00 22 22 0 0 0 0 0
..................................................................................................CTATTGCACTTATACCGGCC............................................................ 20 1 1 22.00 22 22 0 0 0 0 0
...................................................................................................TACTGCACTTATACCGGCCT........................................................... 20 1 1 22.00 22 22 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGTCCTGC......................................................... 22 2 1 22.00 22 19 0 3 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGATT....................................................... 24 1 1 21.00 21 12 9 0 0 0 0
...................................................................................................TGTTGCACTTATACCGGCCTGAAAA...................................................... 25 3 1 21.00 21 21 0 0 0 0 0
...................................................................................................TACTGCACTTCTACCGGCCTGA......................................................... 22 2 1 21.00 21 21 0 0 0 0 0
...................................................................................................TAATGCACTTATACCGGCCTGA......................................................... 22 1 1 21.00 21 18 1 2 0 0 0
...................................................................................................TATTGCACTTATACCTGCCTGAA........................................................ 23 2 1 21.00 21 17 1 3 0 0 0
...................................................................................................TATTGCACTTATCCCGGCC............................................................ 19 1 1 20.00 20 20 0 0 0 0 0
....................................................................................................ATTGCACTTATACCGGCCTGAAAA...................................................... 24 2 1 20.00 20 8 12 0 0 0 0
...................................................................................................TGTTGCACTTATACCGGCCTGAC........................................................ 23 2 1 20.00 20 20 0 0 0 0 0
...................................................................................................TATTCCACTTATACCGGCCTGA......................................................... 22 1 1 19.00 19 7 5 7 0 0 0
...................................................................................................TATTTCACTTATACCGGCCTGAAA....................................................... 24 3 1 19.00 19 18 1 0 0 0 0
...................................................................................................TATTGCACTTATCCCGGCCTGAAA....................................................... 24 3 1 19.00 19 19 0 0 0 0 0
...................................................................................................TATTGCACTTCTACCGGCCTGC......................................................... 22 2 1 19.00 19 17 0 2 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTTAAA....................................................... 24 3 1 18.00 18 12 0 6 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGAAAC...................................................... 25 3 1 18.00 18 15 3 0 0 0 0
...................................................................................................TATTGCAGTTATACCGGCCTGA......................................................... 22 1 1 18.00 18 17 1 0 0 0 0
...................................................................................................TGTTGCACTTATACCGGCCTGAT........................................................ 23 1 1 18.00 18 18 0 0 0 0 0
.....................................................................................................TGGCACTTATACCGGCCTGA......................................................... 20 1 1 18.00 18 18 0 0 0 0 0
...................................................................................................TATTGCACCTATACCGGCCTGAAA....................................................... 24 3 1 18.00 18 8 10 0 0 0 0
...................................................................................................TATTGCGCTTATACCGGCCTGAA........................................................ 23 2 1 18.00 18 17 1 0 0 0 0
.................................................................................................TCTATTGCACTTATACCGGCCTGA......................................................... 24 2 1 17.00 17 16 1 0 0 0 0
...................................................................................................TATTGCACCTATACCGGCCTGAA........................................................ 23 2 1 17.00 17 7 10 0 0 0 0
...................................................................................................TATTGCACTTACACCGGCCTGAA........................................................ 23 2 1 17.00 17 17 0 0 0 0 0
...............................................................................................GATCTATTGCACTTATACCGGCCTGA......................................................... 26 3 1 17.00 17 17 0 0 0 0 0
...................................................................................................TATTGCATTTATACCGGCCTGA......................................................... 22 1 1 17.00 17 17 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGCAA....................................................... 24 3 1 17.00 17 17 0 0 0 0 0
...................................................................................................TATTGCACTTATACCTGCCTG.......................................................... 21 1 1 17.00 17 8 4 5 0 0 0
...................................................................................................GATTGCACTTATACCGGCCTGAAA....................................................... 24 3 1 17.00 17 16 1 0 0 0 0
...................................................................................................TATTGCACTTATAACGGCCTGA......................................................... 22 1 1 17.00 17 10 2 5 0 0 0
...................................................................................................AATTGCACTTATACCGGCCTGAAA....................................................... 24 3 1 16.00 16 15 1 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTAT......................................................... 22 2 1 16.00 16 16 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGGA........................................................ 23 2 1 16.00 16 9 5 2 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTAAAA....................................................... 24 3 1 16.00 16 14 2 0 0 0 0
....................................................................................................AGTGCACTTATACCGGCCTGAAA....................................................... 23 3 1 16.00 16 16 0 0 0 0 0
...................................................................................................TACTGCAATTATACCGGCCTGA......................................................... 22 2 1 16.00 16 16 0 0 0 0 0
...................................................................................................TATTGCACTTATACCTGCC............................................................ 19 1 1 16.00 16 16 0 0 0 0 0
.......................................................................................................GCACTTATACCGGCCTGA......................................................... 18 0 1 15.00 15 12 1 2 0 0 0
...................................................................................................TATTGGACTTATACCGGCCTGAA........................................................ 23 2 1 15.00 15 15 0 0 0 0 0
...............................................................AGGTCGGTATTTGTGTCAATAT............................................................................................. 22 1 1 15.00 15 15 0 0 0 0 0
...................................................................................................TATTGCACTGATACCGGCCTGA......................................................... 22 1 1 15.00 15 13 1 1 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGAAAT...................................................... 25 3 1 15.00 15 14 1 0 0 0 0
...............................................................AGGACGGTATTTGTGTCAATATGA........................................................................................... 24 1 1 15.00 15 12 1 1 0 0 1
...................................................................................................TATTGCACTTATACCGGCCTC.......................................................... 21 1 1 15.00 15 13 0 1 0 1 0
....................................................................................................ATTTCACTTATACCGGCCTGA......................................................... 21 1 1 14.00 14 14 0 0 0 0 0
...................................................................................................TATTGCACTTATACCAGCCTGAA........................................................ 23 2 1 14.00 14 11 1 2 0 0 0
...............................................................AGGACGGTATTTGTGTCAATATT............................................................................................ 23 1 1 14.00 14 2 0 12 0 0 0
...................................................................................................TATTGCACTTATACCGTCCTTA......................................................... 22 2 1 14.00 14 3 0 11 0 0 0
...................................................................................................TATTGCACTTATACAGGCC............................................................ 19 1 1 14.00 14 14 0 0 0 0 0
...................................................................................................TATTGGACTTATACCGGCCTGAAA....................................................... 24 3 1 14.00 14 14 0 0 0 0 0
...................................................................................................TATTGCACTTATACTGGCCTGAA........................................................ 23 2 1 14.00 14 14 0 0 0 0 0
...................................................................................................TATTGCACTTATACCTGCCTGAAA....................................................... 24 3 1 14.00 14 13 0 1 0 0 0
...................................................................................................TATTGCACTAATACCGGCCTGA......................................................... 22 1 1 14.00 14 14 0 0 0 0 0
....................................................................................................ATTGCACTCATACCGGCCTGA......................................................... 21 1 1 13.00 13 0 13 0 0 0 0
...................................................................................................TATTGCACATATACCGGCCTG.......................................................... 21 1 1 13.00 13 0 13 0 0 0 0
...................................................................................................TATTGCACATATACCGGCCTGAA........................................................ 23 2 1 13.00 13 1 12 0 0 0 0
...................................................................................................TGTTGCACTTATACCGGCCTGC......................................................... 22 2 1 13.00 13 13 0 0 0 0 0
...................................................................................................TATTTCACTTATACCGGCC............................................................ 19 1 1 13.00 13 13 0 0 0 0 0
....................................................................................................ATTGCACTAATACCGGCCTGA......................................................... 21 1 1 12.00 12 0 12 0 0 0 0
...................................................................................................TGTTGCACTTATACCGGCCTGT......................................................... 22 2 1 12.00 12 12 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCCG.......................................................... 21 1 1 12.00 12 8 0 4 0 0 0
...................................................................................................TATTGCACTTATACCGTCCTGAA........................................................ 23 2 1 12.00 12 7 0 5 0 0 0
...................................................................................................TATTGCACCTATACCGGCCTG.......................................................... 21 1 1 12.00 12 2 10 0 0 0 0
...................................................................................................AATTGCACTTATACCGGCCTG.......................................................... 21 1 1 12.00 12 12 0 0 0 0 0
...........................................TTTGTTGCCAGATTATCTTC................................................................................................................... 20 0 1 12.00 12 9 0 3 0 0 0
...................................................................................................TATTGCAATTATACCGGCCTG.......................................................... 21 1 1 12.00 12 12 0 0 0 0 0
...................................................................................................TTTTGCACTTATACAGGCCTGA......................................................... 22 2 1 12.00 12 12 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGGCTGA......................................................... 22 1 1 12.00 12 11 0 1 0 0 0
...............................................................AGCACGGTATTTGTGTCAATATG............................................................................................ 23 1 1 12.00 12 12 0 0 0 0 0
..................................................................................................CTATTGCACTTATACCGGCCTG.......................................................... 22 1 1 11.00 11 8 3 0 0 0 0
...................................................................................................TATTGCACTTATACCGTCCTGAAA....................................................... 24 3 1 11.00 11 8 1 2 0 0 0
...................................................................................................TATTGCAATTATACCGGCCTGC......................................................... 22 2 1 11.00 11 11 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGATAA...................................................... 25 1 1 11.00 11 9 1 0 1 0 0
...................................................................................................TATTGCTCTTATACCGGCCTGA......................................................... 22 1 1 11.00 11 7 2 2 0 0 0
..................................................................................................CGATTGCACTTATACCGGCCTGAA........................................................ 24 3 1 11.00 11 11 0 0 0 0 0
....................................................................................................ATCGCACTTATACCGGCCTGA......................................................... 21 1 1 11.00 11 11 0 0 0 0 0
...................................................................................................TGTTTCACTTATACCGGCCTGA......................................................... 22 2 1 11.00 11 11 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCCGAA........................................................ 23 2 1 11.00 11 9 1 1 0 0 0
...................................................................................................TATTGCACTTATACCGTCCTG.......................................................... 21 1 1 11.00 11 4 0 7 0 0 0
...............................................................ATGACGGTATTTGTGTCAATATA............................................................................................ 23 2 1 11.00 11 11 0 0 0 0 0
...................................................................................................TATTGCAATTATACCGGCCTGAAA....................................................... 24 3 2 11.00 22 22 0 0 0 0 0
...................................................................................................TATTGTACTTATACCGGCCTGAAA....................................................... 24 3 1 11.00 11 10 1 0 0 0 0
...................................................................................................TATTGCACATTCACCGGCCTGAT........................................................ 23 3 1 10.00 10 1 9 0 0 0 0
...................................................................................................TATTGCGCTTATACCGGCCTGAAA....................................................... 24 3 1 10.00 10 10 0 0 0 0 0
...................................................................................................TATTGCACGTATACCGGCCTGT......................................................... 22 2 1 10.00 10 0 10 0 0 0 0
...................................................................................................TACTGCACTTATACCGGCCTGAAAA...................................................... 25 3 1 10.00 10 10 0 0 0 0 0
..................................................................................................GTATTGCACTTATACCGGCCTGA......................................................... 23 1 1 10.00 10 0 10 0 0 0 0
...................................................................................................TATTGCACTTATACCGGTCTGAA........................................................ 23 2 1 10.00 10 10 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCTTGAA........................................................ 23 2 1 10.00 10 10 0 0 0 0 0
....................................................................................................ATTGCACTTATACCGGCCT........................................................... 19 0 1 10.00 10 1 8 1 0 0 0
...................................................................................................TATTGCACTTATACCGACCTGAA........................................................ 23 2 1 10.00 10 9 1 0 0 0 0
...................................................................................................TATTGCACTTATCCCGGCCTGC......................................................... 22 2 1 10.00 10 9 0 0 0 1 0
...................................................................................................TATTGCAACTATACCGGCCTGA......................................................... 22 2 1 10.00 10 10 0 0 0 0 0
...................................................................................................TGTTGCACTTATACCGGCCC........................................................... 20 2 1 10.00 10 10 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCATGA......................................................... 22 1 1 10.00 10 7 0 3 0 0 0
...................................................................................................TGTTGCACTTATACCTGCCTGA......................................................... 22 2 1 10.00 10 10 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGAGA....................................................... 24 2 1 10.00 10 9 0 1 0 0 0
...............................................................AGGACGGTATTTGTGTCAAT............................................................................................... 20 0 1 10.00 10 6 3 1 0 0 0
...................................................................................................TATTGCACTTATCCCGGCCTG.......................................................... 21 1 1 10.00 10 10 0 0 0 0 0
...............................................................AGGACGGTATTTGTGTCAATAC............................................................................................. 22 1 1 10.00 10 10 0 0 0 0 0
...................................................................................................TATAGCACTTATACCGGCCT........................................................... 20 1 1 10.00 10 10 0 0 0 0 0
..................................................................................................TTATTGCACTTATACCGGCCTGA......................................................... 23 1 1 9.00 9 1 8 0 0 0 0
....................................................................................................ATTGCACATTCACCGGCCTGA......................................................... 21 3 2 9.00 18 1 17 0 0 0 0
...................................................................................................TATTGCGCTTATACCGGCCTG.......................................................... 21 1 1 9.00 9 8 0 1 0 0 0
................................................................................................ATCTATTGCACTTATACCGGCCTGA......................................................... 25 2 1 9.00 9 9 0 0 0 0 0
...................................................................................................TGTTGCGCTTATACCGGCCTGA......................................................... 22 2 1 9.00 9 9 0 0 0 0 0
...................................................................................................TATTGCACTCATACCGGCC............................................................ 19 1 1 9.00 9 9 0 0 0 0 0
...................................................................................................TCTTGCACTTATACCGGCCTGA......................................................... 22 1 1 9.00 9 5 2 2 0 0 0
...................................................................................................TATTGCACTTATACCGGACTGA......................................................... 22 1 1 9.00 9 3 2 4 0 0 0
...................................................................................................TACTGCACTTATCCCGGCCTGAA........................................................ 23 3 1 9.00 9 9 0 0 0 0 0
...................................................................................................AATTGCACTTATACCGGCC............................................................ 19 1 1 9.00 9 9 0 0 0 0 0
...................................................................................................TATTGCACTTATACCTGCCTTA......................................................... 22 2 2 9.00 18 0 0 18 0 0 0
...................................................................................................TATTGCACTTATACGGGCCTGA......................................................... 22 1 1 9.00 9 7 1 1 0 0 0
...................................................................................................TATTGCACTTACACCGGCCTGAAA....................................................... 24 3 1 9.00 9 8 1 0 0 0 0
...................................................................................................TATCGCACTTATACCGGCCT........................................................... 20 1 1 9.00 9 9 0 0 0 0 0
..................................................................................................ATATTGCACTTATACCGGCCTGA......................................................... 23 0 1 9.00 9 4 5 0 0 0 0
...................................................................................................TACTGCACCTATACCGGCCTGA......................................................... 22 2 1 9.00 9 9 0 0 0 0 0
.....................................................................................................TTCCACTTATACCGGCCTGA......................................................... 20 1 1 9.00 9 9 0 0 0 0 0
...................................................................................................TATTGCACTTATACCCGCCTCA......................................................... 22 2 1 9.00 9 0 0 9 0 0 0
...................................................................................................TATGGCACTTATACCGGCCTGT......................................................... 22 2 1 8.00 8 7 0 1 0 0 0
...................................................................................................TATTGCACTTAAACCGGCCTGA......................................................... 22 1 1 8.00 8 7 1 0 0 0 0
...................................................................................................TATTGCAATTATACCGTCCTGA......................................................... 22 2 1 8.00 8 8 0 0 0 0 0
....................................................................................................TTTGCACTTATACCGGCCTGA......................................................... 21 1 1 8.00 8 8 0 0 0 0 0
...................................................................................................CATTGCACTTATACCGGCCTG.......................................................... 21 1 1 8.00 8 7 0 1 0 0 0
...................................................................................................TATTGCACGTATACCGGCCTGAAAA...................................................... 25 3 1 8.00 8 0 8 0 0 0 0
...................................................................................................TGTCGCACTTATACCGGCCTGA......................................................... 22 2 1 8.00 8 8 0 0 0 0 0
...................................................................................................TATTGCAATTCTCCCGGCCTGA......................................................... 22 3 1 8.00 8 8 0 0 0 0 0
...................................................................................................TATGGCACTTATACCGGCCTGAAAA...................................................... 25 3 1 8.00 8 8 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCT............................................................ 19 1 1 8.00 8 8 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCGGAA........................................................ 23 2 1 8.00 8 7 1 0 0 0 0
...............................................................AGGACGGTATTTGTGTCAATATGT........................................................................................... 24 1 1 8.00 8 4 2 1 1 0 0
...................................................................................................TATTGGACTTATACCGGCCTG.......................................................... 21 1 1 8.00 8 8 0 0 0 0 0
...................................................................................................TATTTCACTTATACCGGCCTG.......................................................... 21 1 1 8.00 8 7 0 1 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGTAA....................................................... 24 3 1 8.00 8 4 4 0 0 0 0
...................................................................................................TATTGCACTTATCCAGGCCTGAA........................................................ 23 3 1 8.00 8 8 0 0 0 0 0
...................................................................................................TATTGCACTTGTACCGGCCTGAAA....................................................... 24 3 1 8.00 8 8 0 0 0 0 0
...................................................................................................TATTGCCCTTATACCGGCCTGA......................................................... 22 1 1 8.00 8 3 1 4 0 0 0
...................................................................................................TATTGCACTTATAGCGGCCTGA......................................................... 22 1 1 8.00 8 8 0 0 0 0 0
...................................................................................................TGCTGCACTTATACCGGCCTGAA........................................................ 23 3 1 8.00 8 8 0 0 0 0 0
...............................................................ATGACGGTATTTGTGTCAATA.............................................................................................. 21 1 1 8.00 8 8 0 0 0 0 0
...................................................................................................TATTGAACTTATACCGGCCTGA......................................................... 22 1 1 7.00 7 4 1 2 0 0 0
...................................................................................................TGTTGCACTTATACCGGCCTGAG........................................................ 23 2 1 7.00 7 7 0 0 0 0 0
...................................................................................................TATTGCACTTATCCAGGCCTG.......................................................... 21 2 1 7.00 7 7 0 0 0 0 0
...................................................................................................TATTGCACTTATACTGGCC............................................................ 19 1 1 7.00 7 7 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGACCTGAAA....................................................... 24 3 1 7.00 7 7 0 0 0 0 0
....................................................................................................TATGCACTTATACCGGCCTGA......................................................... 21 2 1 7.00 7 6 1 0 0 0 0
...................................................................................................TATTGCACTTATACCGGTC............................................................ 19 1 1 7.00 7 7 0 0 0 0 0
...................................................................................................TACTGCACTTATACCGGCCTGAC........................................................ 23 2 1 7.00 7 7 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGGCCTGAAAG...................................................... 25 3 1 7.00 7 7 0 0 0 0 0
...................................................................................................TATTGCACTTATACCGCCC............................................................ 19 1 1 7.00 7 7 0 0 0 0 0

Anti-sense strand reads

ATCTATAATATGCTTGTCGTCGCTAGCGATAGACTCTCTTTATAAACAACGGTCTAATAGAAGTCCTGCCATAAACACAGTTATACCTATAAAGTTTGTATAACGTGAATATGGCCGGACTACTAGAGGCCGCGAGCAGTAGACACTGATTTTCACGCTTTTATCGTTTTGTATTTGT

******************************************.(((.((..(((.(((((.((((((..(((.(((((((...........))))))))))..)))))).))))).))).)).)))....************************************************ 		Read size # Mismatch Hit Count Total Norm Total V055

head

 V039

embryo
......................................................................................................ACGCGAGTATTGCCGGACT......................................................... 19 3 13 0.08 1 1 0
.........................................ATATACAACGATCTAATACA..................................................................................................................... 20 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_13266:4132881-4133058 + dan-mir-311a Known_mirbase TAGATA-TTAT-A-CGAACAGCAGCG----------A-----------T---------------------------------------------CGCTATCTGAGAGAAATATTTGTTGCCAGATTATCTTCAGGACGGTATTTGTGTCAATATGGATAT---------------TTCAAACATATTGCACTTATACCGGCCTGATGATCTCCGGCG--CTCGTCATCTG--------------------TGACT---------------------------------AAAA---------------GT-----------G-CGA-AAATA-----------GC-A----AAA--CATAAACA
droBip1 scf7180000396427:2575598-2575780 + TAGATATT-AT-G-CGAATAGCAGCG----------T-----------C---------------------------------------------CGGTATGTGAGTGAAATATTTGTGGCCAGATACCCTTTAGGTCGGTATTTGTGACAATATGATAT----------------TTCAATCATATTGCACTTGTACCGGCCTGATAATATCTGGCA--TTCGTCATCTG--------------------TGAGTCTGTG----------------------------AAAA---------------GT-----------G-CGCGAAAT------------ATCA----AAA--CATAAACA
droKik1 scf7180000302471:941377-941580 - ATAATATT-C-AGAC--TGATCAACA----------GAAT--------TT-----GCGTTTTTGTTTTGGG---------TAAA----ATATT-------------------------ACCAGACACTGGTCAGGACGGGATCTGTGTCAATACGTGATT---------------TTGATTCATATTGCACACATACCGGCCTGATAATGTCTGGGCTATTCGTCAGATAGTGTACGCTTTAGTTTTCAGTGAA--AGTA----------------------------AAAG---------------GT-----------G-TCG----G------------ACGA----ATG--CACGAACA
droFic1 scf7180000454039:1776012-1776185 - TAAAAT-T-G--G-CGTAGAACGACG----------AAAA--------GA-GT--GTTTTTTTATTTTTTT---------TTAT----TTGTT-------------------------TCCGGACAGTTGTTTGGACGGAAGATGCGCCAGTATGCGGAT--------------TTTTAAGCATATTGCACATTTACCGGCCTAGTAATGCACTGGCTATTCATCAATTA------------------------------------------------------------------------------T-----------T-TAT-----------------GCAA----ATGCACAAAAACA
droEle1 scf7180000491201:735951-736128 - TAGAAT-T-CTGC-CAGAAAACGACA----------AAAAAAAAAGAAGG-G-TT-------------------------TGAT--C-TAAGA-------------------------CCTAGATTCTTTTTCGGACGGTATCTGCGACAATATGCGAAC---------------TTTTAACATATTGCACATTTACCGGCCTGAAATTATCATGGATATTCATCAAGAT--------------------AT-T----TT----------------------------AAAA---------------GC-----------T-TTT-----------------GCAA---TGTA--CACAAACA
droRho1 scf7180000780104:82046-82215 - TAAAAT-C-CTGG-CATTAAACGGCG----------AAAA--------GT-G-TT-------------------------CAAA--C-TAAGT-------------------------CCTAGGTTGTTTTTCGGACGGTATTTGTGACAATATGCTTAA--------------TTTTAGACATATTGCACATTTACCGGCCTGAAATTAACATGGATATTCTTCGATAT-----------------------TTGT--------------------------------AAA---------------GT-----------TCCTG-----------------GCAG---TACA--CACAAACA
droBia1 scf7180000302291:2816418-2816575 + TAAACT-C-G-AG-CAAGAAGC-GTA----------AAAA--------TCGG-TT-------------------------TAAA----TGGTT-------------------------CCGAGATAGTTTTTCGGACGGTGTTTGTGACAATATTTTAGG---------------TTTAAAAATATTGCACATTCACCGGCCTCTAAACATCAAGGGCATTCCTCAAAAA-----------------------------------------------------------------------------GC-----------G-CCT-----------------GCAA----ATA--CACAAGCA
droTak1 scf7180000415401:99708-99872 - TAAACT-T-C-GG-CTATAAACAGCA----------AAAA--------ATAA-TT-------------------------CAAA--T-TAATT-------------------------CCAAGATAGTTTTTCGGACGGTGTCTGCGTCAATATTTCAGT--------------TTTAAAACATATTGCACATTCACCGGCCTGAAAATATCAAGGGTGTTCCTCAAAAA-----------------------------------------------------------------------------GT-----------T-CCT-----------------GCAAATACACA--CACACACA
droEug1 scf7180000409474:1490194-1490361 + TAAAGT-T-CCAG-CAG-AATAAATA----------A-AT----AGTTGG-G----------------------AGAGAACAGAGTTGAAATT-------------------------CCTAAAT-ATTTTTAGGCCTGTGTCTGT-TCAATATAATTAT--------------TTAAAAATATATTGCACACTCACCGGCCTGAAAAGATTAGGGATATTCTTTAAAAA-----------------------------------------------------------------------------GT-----------G-AGT-----------------GCAC----GTA--CACAAACA
dm3 chr2R:16471336-16471495 - dme-mir-311 Known_mirbase TAGGCG------G-CA--AGACGGTG----------AAAA--------------------------------------------ATCGAAATT-------------------------TCTAGATCATTTTTCGGACGGTATATGGGTTAATATTTCATT--------------TGTCGAATATATTGCACATTCACCGGCCTGAAAATATCAAGAATTAACATCGAAAA-----------------------GTGAAAA----------------------------AAAA---------------GT-----------G-TTT-----------------GCGA----AAA--CATAAACA
droSim2 2r:17040814-17040965 - dsi-mir-311 Known_mirbase GACAGT-------------------G----------AAA--------------------------------------------AATCGAAATT-------------------------TCTAGATCATTTTTCGGACGGTATATGAGTCAATATTTTTTT----------TT--TTTCGAATATATTGCACATTCACCGGCCTGAAAATATCAAGAATTAGCATCGAAAA-----------------------AGAAAAA----------------------------AAAA---------------GT-----------G-CTT-----------------GCAA----AAA--CATAAACA
droSec2 scaffold_1:14025559-14025765 - dse-mir-311 Known_mirbase ATTACT-TTA-AA-A-AGAATCATCATTGAGCAAAGTAAT--------TA-----GTTTTTTTTCCTTGCAATAGGCGGCAAGACTGGAAATT-------------------------TCTAGATAATTTTTCGGACGGTATATGAGTCAATGTTTTCTT--------------TTTCGAATATATTGCACATTCACCGGCCTGAAAATATCAAGAATTAGCATCGAAAA-----------------------AGAAAAA---------------------------TAAAA---------------GT-----------G-CTT-----------------GCAA----AAA--CATAAACA
droYak3 2R:12724810-12724943 + dya-mir-311a Known_mirbase AAAAAT------------------------------------------------------------------------------ATCTCACTT-------------------------TCTAGATAGTTTTGCGGACGGTATCTGCGTCAATATTTCCTT--------------GTTAGAATATATTGCACATTCACCGGCCTGAAAATATCAAGGACTTGCATCGAAAA-----------------------------------------------------------------------------GT-----------G-CTT-----------------GCAA----ATA--CACAAACA
droEre2 scaffold_4845:10616513-10616653 - der-mir-311a Known_mirbase TAAAAA-C------------------------------------------AG-TT-------------------------GAAACCC-CTAAC-------------------------CCTAGATAGTTTTTCGGACGGTATCTGCGTCAATATTTCCTT--------------GTTAGAATATATTGCACATTCACCGGCCTGAAAATATCAAGGACTTACATCAAAAA-----------------------------------------------------------------------------GT-------------CTT-----------------GCAA----ATA--CACAAATA
droPer2 scaffold_4:2566684-2566816 + AAAAAC-A-ATAG-CAA-CGCCGGCA----------A-----------C---------------------------------------------AGCAAAGTAT--------------GT---ACAATTAT---------------------------------------------TCAAAGAATCTTCACATTT------------------------TTCATGAATTA------------------------TAAA---------------------------CACAAAAATACAT----CCATAGTGTGCGGAGTATG-CGCTGTGC------------ATTT----GTA--CACCAACA
droVir3 scaffold_12875:13668819-13669018 - dvi-mir-311 Known_mirbase TGAAAAGTTA--A-----AGCT-GGA----------AAAA--------------------------------------------CTAGTGCGTCC-----------------------GCATGACCATTTTAAGGACGGTATTTGTGACAATATGTGCAGTT-AAATCAATT--TGTTTAGCATATTGCACATCTCCCGGCCTAAAAATGAACCGTGCTCTCTTCGATAT-----------------------ATGGAAC------A-T------------------TAAAA-CAATTTGGTAAATACTGCGCATAG---C-CTT-----------------GCGC---CTTA--TGTAATCA
droMoj3 scaffold_6496:9090382-9090586 - dmo_21 confident AGTAAGTTTC-AA-A-AGAAAAAACG----------AAAA--------AT----------------------------------GTCAAATTT-------------------------TCAGCTGCGTTTGCAGGACGGTATTTGTGACAATATGAATTATTGAAATCAATT--TATTCAGCATATTGCACATCTCCCGGCCTATAAAACAGTTGTGAGCCCGTCGATTT-----------------------AAATGATTTGTGTATTTAAAATAAATTTTCACCATAA-----------------AT-----------A--TC-----------------GTTT----AAA--TGTATCCA
droGri2 scaffold_15245:17564448-17564621 + dgr_43 confident CAGTTA-T-C-TG-CATT--------------------------------------------------------------------------------------------------------AACCATTTTCAGGATGGAAGCTGTGACAATATGTAGGTTT-TAATTAATTTATATTTCATATATTGCACACCTCCCGGCCTATAAATGATTCTTGAGCTCCTCGATTT--------------------TGTT-------TATATATC-------------------TAAA---------------GTGT-----------TGA-AAATTGGAAAGCGTCAACT-----AAT--TGTGGACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TAGATA-TTAT-A-CGAACAGCAGCG----------A-----------T---------------------------------------------CGCTATCTGAGAGAAATATTTGTTGCCAGATTATCTTCAGGACGGTATTTGTGTCAATATGGATAT---------------TTCAAACATATTGCACTTATACCGGCCTGATGATCTCCGGCG--CTCGTCATCTG--------------------TGACT---------------------------------AAAA---------------GT-----------G-CGA-AAATA-----------GC-A----AAA--CATAAACASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGA..............................................................................................................................................................221104879.0010487912507892243069293119
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGAA.............................................................................................................................................................23113773.0013773104912489232102
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGAAA............................................................................................................................................................2418865.0088651007777187000
.......................................................................................................................................................................................TATTGCACTTATACCGGCC.................................................................................................................................................................1918002.008002979849000
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTG...............................................................................................................................................................2116004.00600412654440280586
........................................................................................................................................................................................ATTGCACTTATACCGGCCTGA..............................................................................................................................................................2111128.0011287853385000
.......................................................................................................................................................................................TATTGCACTTATACCGGCCT................................................................................................................................................................201775.0077515258537001
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGAT.............................................................................................................................................................231560.00560544937051
....................................................................................................................................AGGACGGTATTTGTGTCAATATG................................................................................................................................................................................................................231527.00527176260522316
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGC..............................................................................................................................................................221365.003651431239000
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGT..............................................................................................................................................................221355.003555127030220
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGAC.............................................................................................................................................................231312.0031293021000
....................................................................................................................................AGGACGGTATTTGTGTCAATAT.................................................................................................................................................................................................................221205.002051817212030
.......................................................................................................................................................................................TATTGCACTTATACCGGCCC................................................................................................................................................................201159.0015911571000
........................................................................................................................................................................................ATTGCACTTATACCGGCCTGAA.............................................................................................................................................................221147.0014764812000
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGAG.............................................................................................................................................................231146.00146201213011
........................................................................................................................................................................................ATTGCACTTATACCGGCCTGAAA............................................................................................................................................................231122.0012265570000
.........................................................................................................................................................................................TTGCACTTATACCGGCCTGA..............................................................................................................................................................201117.0011736810000
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGAAT............................................................................................................................................................241114.0011461080000
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGG..............................................................................................................................................................22198.009832597000
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGAAC............................................................................................................................................................24192.00928795000
........................................................................................................................................................................................ATTGCACTTATACCGGCCTG...............................................................................................................................................................20183.008369131000
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGCA.............................................................................................................................................................23147.004713412000
.......................................................................................................................................................................................TATTGCACTTATACCGGCCA................................................................................................................................................................20144.00443356000
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGATA............................................................................................................................................................24143.00433371200
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTA...............................................................................................................................................................21137.00378290000
........................................................................................................................................................................................ATTGCACTTATACCGGCC.................................................................................................................................................................18137.00370370000
....................................................................................................................................AGGACGGTATTTGTGTCAATATA................................................................................................................................................................................................................23136.00366255000
.......................................................................................................................................................................................TATTGCACTTATACCGGC..................................................................................................................................................................18135.00352264210
....................................................................................................................................AGGACGGTATTTGTGTCAATA..................................................................................................................................................................................................................21135.00354235012
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGACA............................................................................................................................................................24135.00352303000
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTT...............................................................................................................................................................21134.00344255000
.........................................................................................................................................................................................TTGCACTTATACCGGCCTGAAA............................................................................................................................................................22132.00324271000
.....................................................................................................................................GGACGGTATTTGTGTCAATATG................................................................................................................................................................................................................22128.00282710000
.........................................................................................................................................................................................TTGCACTTATACCGGCCTGAA.............................................................................................................................................................21126.00265201000
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGTA.............................................................................................................................................................23125.002541011000
..........................................................................................................................................................................................TGCACTTATACCGGCCTGA..............................................................................................................................................................19122.00228140000
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGATT............................................................................................................................................................24121.00219120000
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGAAAC...........................................................................................................................................................25118.00183150000
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGCAA............................................................................................................................................................24117.00170170000
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTAT..............................................................................................................................................................22116.00160160000
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGGA.............................................................................................................................................................23116.0016592000
...........................................................................................................................................................................................GCACTTATACCGGCCTGA..............................................................................................................................................................18115.00151122000
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGAAAT...........................................................................................................................................................25115.00151140000
....................................................................................................................................AGGACGGTATTTGTGTCAATATGA...............................................................................................................................................................................................................24115.00151121001
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTC...............................................................................................................................................................21115.00150131100
....................................................................................................................................AGGACGGTATTTGTGTCAATATT................................................................................................................................................................................................................23114.00140212000
................................................................................................................TTTGTTGCCAGATTATCTTC.......................................................................................................................................................................................................................................20112.0012093000
........................................................................................................................................................................................ATTGCACTTATACCGGCCT................................................................................................................................................................19110.0010811000
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGAGA............................................................................................................................................................24110.0010091000
....................................................................................................................................AGGACGGTATTTGTGTCAAT...................................................................................................................................................................................................................20110.0010361000
....................................................................................................................................AGGACGGTATTTGTGTCAATAC.................................................................................................................................................................................................................22110.00100100000
......................................................................................................................................................................................ATATTGCACTTATACCGGCCTGA..............................................................................................................................................................2319.009540000
.......................................................................................................................................................................................TATTGCACTTATACCGGCT.................................................................................................................................................................1918.008080000
....................................................................................................................................AGGACGGTATTTGTGTCAATATGT...............................................................................................................................................................................................................2418.008241010
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGTAA............................................................................................................................................................2418.008440000
.......................................................................................................................................................................................TATTGCACTTATACCGGCCTGAAAG...........................................................................................................................................................2517.007070000
droBip1
TAGATATT-AT-G-CGAATAGCAGCG----------T-----------C---------------------------------------------CGGTATGTGAGTGAAATATTTGTGGCCAGATACCCTTTAGGTCGGTATTTGTGACAATATGATAT----------------TTCAATCATATTGCACTTGTACCGGCCTGATAATATCTGGCA--TTCGTCATCTG--------------------TGAGTCTGTG----------------------------AAAA---------------GT-----------G-CGCGAAAT------------ATCA----AAA--CATAAACASizeHit CountTotal NormTotal
No Reads
droKik1
ATAATATT-C-AGAC--TGATCAACA----------GAAT--------TT-----GCGTTTTTGTTTTGGG---------TAAA----ATATT-------------------------ACCAGACACTGGTCAGGACGGGATCTGTGTCAATACGTGATT---------------TTGATTCATATTGCACACATACCGGCCTGATAATGTCTGGGCTATTCGTCAGATAGTGTACGCTTTAGTTTTCAGTGAA--AGTA----------------------------AAAG---------------GT-----------G-TCG----G------------ACGA----ATG--CACGAACASizeHit CountTotal NormTotal
No Reads
droFic1
TAAAAT-T-G--G-CGTAGAACGACG----------AAAA--------GA-GT--GTTTTTTTATTTTTTT---------TTAT----TTGTT-------------------------TCCGGACAGTTGTTTGGACGGAAGATGCGCCAGTATGCGGAT--------------TTTTAAGCATATTGCACATTTACCGGCCTAGTAATGCACTGGCTATTCATCAATTA------------------------------------------------------------------------------T-----------T-TAT-----------------GCAA----ATGCACAAAAACASizeHit CountTotal NormTotal
No Reads
droEle1
TAGAAT-T-CTGC-CAGAAAACGACA----------AAAAAAAAAGAAGG-G-TT-------------------------TGAT--C-TAAGA-------------------------CCTAGATTCTTTTTCGGACGGTATCTGCGACAATATGCGAAC---------------TTTTAACATATTGCACATTTACCGGCCTGAAATTATCATGGATATTCATCAAGAT--------------------AT-T----TT----------------------------AAAA---------------GC-----------T-TTT-----------------GCAA---TGTA--CACAAACASizeHit CountTotal NormTotal
No Reads
droRho1
TAAAAT-C-CTGG-CATTAAACGGCG----------AAAA--------GT-G-TT-------------------------CAAA--C-TAAGT-------------------------CCTAGGTTGTTTTTCGGACGGTATTTGTGACAATATGCTTAA--------------TTTTAGACATATTGCACATTTACCGGCCTGAAATTAACATGGATATTCTTCGATAT-----------------------TTGT--------------------------------AAA---------------GT-----------TCCTG-----------------GCAG---TACA--CACAAACASizeHit CountTotal NormTotal
No Reads
droBia1
TAAACT-C-G-AG-CAAGAAGC-GTA----------AAAA--------TCGG-TT-------------------------TAAA----TGGTT-------------------------CCGAGATAGTTTTTCGGACGGTGTTTGTGACAATATTTTAGG---------------TTTAAAAATATTGCACATTCACCGGCCTCTAAACATCAAGGGCATTCCTCAAAAA-----------------------------------------------------------------------------GC-----------G-CCT-----------------GCAA----ATA--CACAAGCASizeHit CountTotal NormTotal
No Reads
droTak1
TAAACT-T-C-GG-CTATAAACAGCA----------AAAA--------ATAA-TT-------------------------CAAA--T-TAATT-------------------------CCAAGATAGTTTTTCGGACGGTGTCTGCGTCAATATTTCAGT--------------TTTAAAACATATTGCACATTCACCGGCCTGAAAATATCAAGGGTGTTCCTCAAAAA-----------------------------------------------------------------------------GT-----------T-CCT-----------------GCAAATACACA--CACACACASizeHit CountTotal NormTotal
No Reads
droEug1
TAAAGT-T-CCAG-CAG-AATAAATA----------A-AT----AGTTGG-G----------------------AGAGAACAGAGTTGAAATT-------------------------CCTAAAT-ATTTTTAGGCCTGTGTCTGT-TCAATATAATTAT--------------TTAAAAATATATTGCACACTCACCGGCCTGAAAAGATTAGGGATATTCTTTAAAAA-----------------------------------------------------------------------------GT-----------G-AGT-----------------GCAC----GTA--CACAAACASizeHit CountTotal NormTotal
No Reads
dm3
TAGGCG------G-CA--AGACGGTG----------AAAA--------------------------------------------ATCGAAATT-------------------------TCTAGATCATTTTTCGGACGGTATATGGGTTAATATTTCATT--------------TGTCGAATATATTGCACATTCACCGGCCTGAAAATATCAAGAATTAACATCGAAAA-----------------------GTGAAAA----------------------------AAAA---------------GT-----------G-TTT-----------------GCGA----AAA--CATAAACASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGA..............................................................................................................................................................221534179.005341791030736150176397042201000001708001816280101300000428219631660585995877121268787210128319310711267135921711368391000212207000000000000000000331322046934974720319262733425436634125891504636891813416345508244403115573515132802170001260311638613226361143930592144641731040152317999426599568815796519783811001610100400000000000122201901233018420500040093854137163664561214301472101155252586736325594170100107921831782094036521261272083509748615349624729865416190019010014494012461271632013562184027626002000077126431604016420141584299105367652242709533309690019213000135118018587275104889918793949446415110337428124829151312349005868850141236003721105710956122128315
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTG...............................................................................................................................................................21136352.0036352001013201525011000000002475972300100000001285459129837213991643973419529569151613500011140000000000000000000100019661706034810115111493924210132322711530607328154502360010003110402253516120443841119333149138185119102481013668228193150850000000000011030007010000000000230115920554000119048290101151570223000001092644512412533288151320821643298917254261000210008240740111232003907200620000000140082140004189902727084181390357112400120000003031641092715172135841525740024240338120250062150001019139102692224005200
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAA.............................................................................................................................................................23129931.00299311000041734111016100000004211681000010000054725651531317526862247411393211000496500000000000000000000000354161148128373002174098373500081516600639495261048431175001000000000212112871357142133379983103292413331127741144617000000000002701003926100100000014191471091900282658342001036490100000009134020461294214014423059239023713557000257600610020000004002003001200000001004000041710292335393941330271817000000000450620075398581198074001110319500010031000009321314865000001
....................................................................................................................................CGGACGGTATATGGGTTAATATT................................................................................................................................................................................................................23124229.0024229001000200101000000002628320000000000445285412463186531611610937134127687818485000250000000000000000000000057182784700001008017100000120293043410120000000000000000000000008292282123642150384160102813082341900000000000000000001000000000000034779718838122142083500010013817441126502002541613041477201136153216000000004505600100000100000920000000500581200020395324361211336921150043010000799305102201020290835536101600440180436081611341047757312916132190330177901107
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAA............................................................................................................................................................24112976.001297600002198110700000000214170000000000720104399026136626057812420001412000000000000000000000002101925351221100033131555220005240029212212736217300100010000010011061101301835034570361622941125334116000000000000400000602000000000021075849150004028100100235600000000007420760587813390879203895123270000200001060000010011000000000000000000000146360581181224252210700100000010911009266223496011007381080000000000000120471127000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAT.............................................................................................................................................................2316609.006609000000233103000000000701380000000000036819155441125109675000000000000000000000000010027365730230000200150112002102010261221141114000000000000000001820165130320294566151142121467000000000000000000100000200000078523391000353160110005400000000053112407385363441616661615806100001001104000001004010010000000020051100611244011173319812980020100004810000111471711000006250012004000010211012000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGA..............................................................................................................................................................2115597.005597000000100000000000003302300000000001879571314217191081254000110000000000000000000000027204726000000020610103100008002430012001000000000000030142419152601101913101764204612100000000000000000030000000000000132300010010000001000000000141001398249309295575446484708000000001309000001002040001000000000019100034248392143124120213005000000222000140108154202000014044700002007000000222287000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGT..............................................................................................................................................................2214637.004637000001110100000000003631030000000000181513810310427912514381621158000000000000000000000000000124621132800000105014900110400104211200230010000010101000020144240532341512248211412481619400000000000020200000000000000000384152055000149052501000660000000001352725124279113163107270119339000000002301500000200704000000000002001410004112846105613105127200200000021130032766172856450017164720020012100010561676000010
.......................................................................................................................................................................................TATTGCACATTCACCGGCCT................................................................................................................................................................2014505.00450500000115100300000000021438200000000001786101416821430228426118247200032000000000000000000000001415191936001040014051400330200015026700250010000000000200544400000031422191291116412021015000000000000000000021000000000000158291006000760141000000340020000001049329557138017161207663341000000011020002012004012001000000009114160006916333946521246134005000000302200313184671320036191000004000000372138000100
....................................................................................................................................CGGACGGTATATGGGTTAATAT.................................................................................................................................................................................................................2213189.0031890000000200010000000035370000000001732415382123114101311718800050100000000000000000000001007216001000091220000000010600701015000000000000000000020000202136242180312412321121000000000000000000000000000000000811782831011256810000233200200000014241017102111210000000000060000000040100000000000000303000321120043280432530021000000195931087521801031010001341963670212700148610020517305234100000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAA...........................................................................................................................................................2512617.0026170000023500010000000001000000000000021135207910610131200002500000000000000000000000197602340000000406200000000111015120010000000000000000000880390091100401313010010000000000000000000000000000000011165600010005000001927000000000110014194156801725441644240000100000030000000040000000000000000000002687112822803900000000017300026194110000005133700000000000000713210000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGC..............................................................................................................................................................2212156.00215600000000000000000000440210000000001520818162291507496522711611232100000000000000000000000000001349600000005000000020000041000207002000000001300001915208300071147641005110813220000000000001000000000000000000032220001010000005100000000021012628163120193873000000000108020000003050010000000000051000129474711167222070010000001300000159176911000000021000000000000002301000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAA.............................................................................................................................................................2211910.00191000000003100000000000021220000000000000001000103001102000020000000000000000000000001110375000000020210000000000100610020000000000000000003623000310021100021340000000000001100000000000100000003150000003000000120000000001101135448380215921311271001100000000000000010100000000000000700001917716932820136187001000000120000051915000000789001300500000000212000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCC.................................................................................................................................................................1911209.00120900000000000000000000030510000000000200220100120011010000022000000000000000000000001002100101000004000000000000011003000000000000004332450000000601101100010010100000000000000000000000020000000111140000401110000001001000000043287081323228280000000000010000020000300000000000010400000301092100000000000000002300000200000000000000000001000000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAT.............................................................................................................................................................2211147.001147000000000000000000000209000000000002001200010100102000000000000000000000000000000719240000000001000100100000000100000000000000000000000110010101031100100000000000000000000000000000000000011100040100000021000000000440011047777912561711280000000000010000000010000000000000000100006561062159515800020000004100002524000000006000000100000001100000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAATC...........................................................................................................................................................2511126.0011260000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000104877000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAC.............................................................................................................................................................231788.00788000000000000000000000008000000000010101101110000931000000000000000000000000000000103554000000020100000010000000030050000000000000000003566102400211220010000000000000000000001000000000000020100001000000000100000000003005448455578817210100000000000400000100000000000000000000000023031113353170000000009010001121000000023000000000000000210000000
....................................................................................................................................CGGACGGTATATGGGTTAATATTA...............................................................................................................................................................................................................241725.00725000000000000000000004300000000000010233533150709221830000000000000000000000000000000160000000001000000000000000000000000000000000000000000000716111801250106470000000000000000000000000000000010514000004300000614000100000511010100020000000001000000000000000000000000000000000120001049836000000000410000224840000000035409800010020000000692811000000
....................................................................................................................................CGGACGGTATATGGGTTAATA..................................................................................................................................................................................................................211662.0066200000001000000000000063200000000003202020001212031254000101000000000000000000000000001000000030000000000000501000070000000000000000000000000049114057036140000000000000000000000000000000035195300321130000020602200000121026002020000000000000000000000000000000000000000160000517001142124900000000019000002670001113004122410003006200001112630000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAA............................................................................................................................................................231662.006620000000010000000000000040000000000110001001000010110000000000000000000000000000001570340000010103200000100000002100000000000000000001024114001100005001000000000000000000000000000000000000221000000000000021000000000210047212526586848830000000001000000000000000000000000000100003592256512270000000004000001520000000355000000000000000000000000
.......................................................................................................................................................................................TATTGCACATTCACCGGC..................................................................................................................................................................181639.0063900000000000000000000310010000000000000032001641402149643000530000000000000000000000000000000000000000000000000000000000000000000001020110190000030523341003202030210000000000000000000000000000000011104000004000000420000000001213001100110000000001000000010010000000000000100200008133710287170010000005000003335210100123000000100001010421000000
.........................................................................................................................................................................................TTGCACATTCACCGGCCTGA..............................................................................................................................................................201624.0062400000001010000000000030500000000000001100000010000010000000000000000000000000000051581600000003011000000000000130300800000000000000000000301000000010000000000000000000000000000000000000000101000000030000010000000000200046334347454253810000000000000000000000000010000000000000008763134122160000000000000001200000000302000000000000000000000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAG.............................................................................................................................................................231606.00606000000100000000000001108000000000001110211001002225110000000000000000000000000000100010000000201000000000102002000300000000000000001002023005903111112010000000000000000000000000000000000184161000905200000120000000000100172025191921282900000000000100000000000000000000000000100015272111044134300000000020000016891030110021825000100100000024732000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGG..............................................................................................................................................................221553.00553000000410000000000000003000000000000611420910031363125000000000000000000000000000051209000000000100000000002201211070000000000000000023062240003321000101020000000000000000000000000000000000000000000000000300000000000200911311638240000000000060000000030000100000000100000001139822107986900200000060000041319100000027000000000000001201000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAAA..........................................................................................................................................................261528.00528000001000000000000000200000000000000120001000000000000000000000000000000000000000100020000000000000000000000001000000000000000000100004110102202002010000100000000000000000000000000000000710100010120000054000000000000022163917311512280000000000000000000000000000000000000000000820031426050000000001000001102000000118000000000000002213000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAT............................................................................................................................................................241429.004290000000100000000000000020000000000000001000100000101000000000000000000000000000003128100000001003000000000001013011200000000000002000000010003100000000100000000000000000000020000000000001522300000230140000002100000000010001718155222417340000450001000000001001010000000000000000000140219440000000009000000101100000001000000000000041113000000
....................................................................................................................................CGGACGGTATATGGGTTAATATTAA..............................................................................................................................................................................................................251426.00426000000000000000000000000000000000010111000010202100000000000000000000000000000000738190000000002000000000000000100000000000000000000000000000518202031019400000000000000000000000000000000013012200112000000210000000000100000100000000000000000000000000000000000000000000000212004190600000000068100027280000000014337600000010000000161410000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTG...............................................................................................................................................................201363.0036300000000000000000000001600000000007000000020000100400000000000000000000000000000000000000000030010000000000200000010000000000000010230000000026010210000400000000000000000000000000000000000100000010000000000000000010021130111818287330000000010000000000000100000000000000100002315211352220020000000000002903000000511000000400000000201000000
....................................................................................................................................CGGACGGTATATGGGTTAAT...................................................................................................................................................................................................................201273.002730000000000000000000000090000000000140020002000010110120000000000000000000000000000000020000000400000001000001000000000000000000000000000000000009030010009000000000000000000000000000000000541421001104000000000001000001427000010000000000000000000000010000000000000100110000170031318002000000100100051300115600191112000200900000001441000000
.....................................................................................................................................GGACGGTATATGGGTTAATATT................................................................................................................................................................................................................221264.00264000000000000000000000200000000000000200023030421610430000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000020260402100000000000000000000000000000000010100000000000001000000000230320002000000000000000000000000000000000000000010000315004232130000000007000008330101010061646000200800000002321000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGATT............................................................................................................................................................241182.001820000000000000000000001010000000000000101000000000000000000000000000000000000000000162100000000101000000000000000001000000000000000000000000011101000200000000000000000000000000000000000001100300003030000000100000000001001519141010151416000000000001000000000000000000000010010000030012010000000003100000000000000000000000000000000100000000
...................................................................................................................................TCGGACGGTATATGGGTTAATAT.................................................................................................................................................................................................................231173.001730000000000000000000000000000000000001201000001100000000000000000000000000000000001080300000000000000000000000000000000000000000000000000000001901000000131000000000000000000000000000000000102000001000000010000000000000224041000000000000010000000000000000000000000000003150011511200200000019100004110000000001213000400110000002111000000
......................................................................................................................................................................................ATATTGCACATTCACCGGCCTGA..............................................................................................................................................................231169.001690000001000000000000000010000000000002120000001000000000000000000000000000000000001153700000000000000000000000002000000000000000000000010200000000000000000000000000000000000000000000000000001000000000000000000000000001159121514101022000000000000000000001000000000000000000000010013050000000003000001300000000901000000000000000101000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAAA...........................................................................................................................................................241140.001400000010000000000000000000000000000000000000000001000000000000000000000000000000000000100000000000000000000000000000000000000000000000301000001000010000000000000000000000000000000000000000000000000000000000000000000000671121321151400000000000000000000000000000000000000000011315110040000000000000000402000000100000000000000000000000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGTT.............................................................................................................................................................231131.001310000000000000000000000070000000000000000001000000000000000000000000000000000000000140000000000010000002000000000001000000000000000000000000011000100000000000000000000000000000000000000003001400001004000000000000000000000022111626000000000000000001000000000000000000010000021003050000000000000000000001000000000000000000000000000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAG............................................................................................................................................................241129.001290000000000010000000000000000000000000000000002001100000000000000000000000000000002002100000000000000000000201000001000000000000000000000000104000110100003000000000000000000000000000000008110000000000000010000000000000572247510000000000000000000000000000000000000000000253459260000000004000000103100000010000000000000010310000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAC............................................................................................................................................................241128.001280000000000000000000000000000000000001200020000002020000000000000000000000000000002800300000002000000000000100000000000000000000000000000050000000010000000000000000000000000000000000000000100000000000000110000000000000594968317000060000000000000000000000000000000000000161312110000000003000001220000000000000000000000000102000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAC.............................................................................................................................................................221127.0012700000000000000000000000200000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010100000000000000000000000000000000000000000000000000200000000000000001008561215108100000000000000000000000000000000000000100002817213050000000000000000001000000201000000000000000000000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAT...........................................................................................................................................................251119.0011900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000010000100000000000000000000000000000000130000000000000000000000000000000000000000000035010000011050000002000000000000001403210312000000000000000000000000000000000000000000120022010000000003010000000000000000000000000000010000000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTT...............................................................................................................................................................211118.0011800000000000000000000010240000000000000010041110001000000000000000000000000000000003100100100002002000000000000000002000000000000000000000000000000000110000000000000000001000000000000000005040000101000000000000000000200017332128000000001004000000002000000000000000000000010001020000000002000011010000000000000000100000000210000000
....................................................................................................................................CGGACGGTATATGGGTTAATATAA...............................................................................................................................................................................................................241115.001150000000000000000000000000000000000000100010000010000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000004062000100000000000000000000000000000000000001022000003000000230000000001000000000000000000000000000000000000000000000000000001500010000000000001000001250000000012621000000000000002233000000
...........................................................................................................................................................................................GCACATTCACCGGCCTGA..............................................................................................................................................................181108.00108000000000000000000000100000000000000000200000000010100000000000000000000000000000200110000000000100000000000000100000000000000000000000002003040012000100100000000000000000000000000000000120000000000000001000000000510001711000000000000000000000000000000000000000001000119012210490010000000000000001000000102000000000000000000000000
....................................................................................................................................CGGACGGTATATGGGTTAA....................................................................................................................................................................................................................191103.00103000000000000000000000001000000000000000000100100000100000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000002000000000000000000010000000000000000010110100209000000000013000002213000100020000000000000000000000000000000000000000000200240400100000020100203001011001711000100100000000020000000
..........................................................................................................................................................................................TGCACATTCACCGGCCTGA..............................................................................................................................................................19196.00960000000000000000000000020000000000000000001000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000232213140000000000000000000000000000000000000000004391519070000000001000000300000000001000000000000000000000000
....................................................................................................................................CGGACGGTATATGGGTTAATAA.................................................................................................................................................................................................................22191.009100000000000000000000000200000000001000000000000000110000000000000000000000000000010000000000010100000000300000000000000000000000000000000000013001000000220000000000000000000000000000000010105000101400000000000000000001000000000000000000000000000000000000000000000000000020001140000000005000002100101300434000000000000000331000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTA...............................................................................................................................................................21189.00890000000400020000000000014000000000000000100000001000000000000000000000000000000000101020000000100000000000002000100900000000000000000000000000203100000000000000000000000000000000000000000300000000000000000000000000000033414432000000000000000000000000000000000000010000430003020000000000000000010000000020000000000000000000000100
....................................................................................................................................CGGACGGTATATGGGTTAATATAAA..............................................................................................................................................................................................................25184.008400000000000000000000000000000000000000021000010010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000010000000003000000000000000000000000000000000000000000000000000400000000000000000110100000000000000000000000000000000000000000010000401000000000200004020000100061019000000000000003527000000
....................................................................................................................................CGGACGGTATATGGGTTA.....................................................................................................................................................................................................................18176.007600000000000000000000000000000000000020000010100000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000020100000108000000000011001002121000000000000000000000000000010000000000000100000001000033200000000000000023001001001901000000000000010000000000
....................................................................................................................................CGGACGGTATATGGGTTAATATTT...............................................................................................................................................................................................................24175.00750000000000000000000000000000000000000000011000011020000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103100200000000000000000000000000000000001001000000000000010000000001100200010120000000000000000000000000000000000000000000300190500000000030000003000000001217000100100000000011000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTTT..............................................................................................................................................................22171.0071000000000001000000000006000000000001100112000000000000000000000000000000000000000201020000000002000000000000000000000000000000000000000000001200100000000000000000000000000000000000000000002000000000000000000000000000027473527000000002001000000000000000000000000000000010100010000000000000000001010000000000000000000000000000000
......................................................................................................................................................................................ATATTGCACATTCACCGGCCTG...............................................................................................................................................................22170.0070000000000000000000000000000000000001000000000000002000000000000000000000000000000400130000000001000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000001000000000000017558523000000000000000000000000000000000000000000010001020000000002000011101000000012000000000000001410000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGT..............................................................................................................................................................21170.00700000000000000000000000000000000000000000030000000001000000000000000000000000000000000000000001000000000000000000000000000000000000000000030000000031000000000000000000000000000000000000004010000100000000000000000000000151401230000000000000000000000000000000000000000001304040500000000000000000010000001610000000000000000000000000
....................................................................................................................................CGGACGGTATATGGGTTAATAAA................................................................................................................................................................................................................23167.00670000000000000000000000000000000000010000000000000000000000000000000000000000000000200000000000010000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000070000008000000010000000000000000000000000000000000000000000000000000000000000000200030100000000050000213000011004411000000000000000201000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAG.............................................................................................................................................................22161.00610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100110041230000000000000000000000000000000000000000000413311390000000000010000002000000025000000000000001102000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTC...............................................................................................................................................................21156.0056000000000000000000000002000000000000000002000000111110000000000000000000000000000010000000000000000000000000000000000000000000000000000000001011010010001000000000000000000000000000000000000100000000000100000000000001031121212000000000001000000001000000000000000000000001104120000000000000004052010000000000000000000000100000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGATC............................................................................................................................................................24149.00490000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000132104420000212000000000000000000000000000000000000000112030000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAT............................................................................................................................................................23148.0048000000000000000000000003000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010100010000000000000000000000044213023000001000000000000000000000000000000000000032402040000000000000001101000000001000000000000010000000000
.........................................................................................................................................................................................TTGCACATTCACCGGCCTGAA.............................................................................................................................................................21144.0044000000000000000000000002000000000000000000000000000000000000000000000000000000000000010000000100100000000001010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032639252000000000000000000000000000000000000000000020000110000000000000000000000000000000000000000000000000000
...................................................................................................................................TCGGACGGTATATGGGTTAAT...................................................................................................................................................................................................................21138.0038000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000300000000000000000000100000000000000000000000000000000000000000000020000070004020000000004110001300000000052000000100000000000000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAAAA..........................................................................................................................................................25137.0037000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000002000000000000000000000000000000010000000000000000000000000000000000000000000000000020421534000000000000000000000000000000000000000000110205000000000000000000000000000120000000000000000000000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTTC..............................................................................................................................................................22137.0037000000000000000000000000000000000001210001200000041030000000000000000000000000000000100000000000000000000000000000000000000000000000000002000000000000000100000000000000000000000000000000000000000000000000000000000000001000000000010000002000000000000000000000000010000020100020000000000000003410000000000000000000000000000000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAGT............................................................................................................................................................24135.0035000000000000000000000000000000000000000000000100000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000614000010100000000000000000000001013102000000000000000000000000000000000000000000010110210000000000000000011001000001000000100000000000000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGACT............................................................................................................................................................24135.0035000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000023220033000000000000000000000000000000000000000000010404020000000002000000000100000000000000000000000000000000
....................................................................................................................................CGGACGGTATATGGGTTAATATC................................................................................................................................................................................................................23133.0033000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010000000000000000000000000000000000000010014020000000002000002800000000214000000100000000001000000
.....................................................................................................................................GGACGGTATATGGGTTAATAT.................................................................................................................................................................................................................21132.0032000000000000000000000000000000000001100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000120011110010000002000001100000000338000000000000000001000000
.........................................................................................................................................................................................TTGCACATTCACCGGCCTG...............................................................................................................................................................19132.0032000000000000000000000000000000000000000000000000000100000000000000000000000000000000210000000101100000000000001100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000002211505000000000000000000000000000000000000000000020001020000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGTTT............................................................................................................................................................24129.00290000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211000020100000000000000000000007010111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAC...........................................................................................................................................................25129.0029000000000000000000000000000000000000100000200000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100100000100000000000000000000000000000000000000000000000000000000000000000000000000032104312000000000000000000000000000000000000000000110001000000000000000001011000000000000000000000000000000000
........................................................................................................................................................................................ATTGCACATTCACCGGCC.................................................................................................................................................................18128.00280000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181300000000000000000000000000000000000000000000000000000000000000000000000000000000000000211000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGC..............................................................................................................................................................21128.0028000000000000000000000000000000000000000000100010100000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000010001000001100000000000000100000000000000000000000000000000000000000000000000100000000000000000000000001000000000000000000000060105000000000000000004000000000000000000000000000000000000
droSim2
GACAGT-------------------G----------AAA--------------------------------------------AATCGAAATT-------------------------TCTAGATCATTTTTCGGACGGTATATGAGTCAATATTTTTTT----------TT--TTTCGAATATATTGCACATTCACCGGCCTGAAAATATCAAGAATTAGCATCGAAAA-----------------------AGAAAAA----------------------------AAAA---------------GT-----------G-CTT-----------------GCAA----AAA--CATAAACASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGA..............................................................................................................................................................2211148603.0011486031181798276671188328123080292899983475341617981518543815121664001
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAA.............................................................................................................................................................231134585.00134585423122722356213461030756453312039349321131189000
....................................................................................................................................CGGACGGTATATGAGTCAATATT................................................................................................................................................................................................................23139166.003916604731891223897048391951955553499815561174000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAA............................................................................................................................................................24119190.001919016415284555331410112381056090506917366000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTG...............................................................................................................................................................21111653.0011653177643068129100185990514869031256443002351010
....................................................................................................................................CGGACGGTATATGAGTCAATAT.................................................................................................................................................................................................................2219917.009917014951057011102394622391875350231712590000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGA..............................................................................................................................................................2119758.00975811214878171272022582808154659731522000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGG..............................................................................................................................................................2217660.00766025451681900057591636331901000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAA...........................................................................................................................................................2514575.0045750377112405003832035141097269000
....................................................................................................................................CGGACGGTATATGAGTCAATATTAAA.............................................................................................................................................................................................................2614150.00415000910006255681924943452195000
....................................................................................................................................CGGACGGTATATGAGTCAATATTAA..............................................................................................................................................................................................................2513366.00336600500035739915629377161613000
....................................................................................................................................CGGACGGTATATGAGTCAATA..................................................................................................................................................................................................................2112729.0027290160209257481191121203531999000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAA.............................................................................................................................................................2212573.002573077010706005028954696610000
.......................................................................................................................................................................................TATTGCACATTCACCGGCC.................................................................................................................................................................1912293.00229371511702029881519362821008000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAAA..........................................................................................................................................................2611729.00172900435002232368193963094000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAT.............................................................................................................................................................2311389.0013894872859001781224002216151250000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCT................................................................................................................................................................2011297.00129701624418461551532851392518142550415
......................................................................................................................................................................................ATATTGCACATTCACCGGCCTGA..............................................................................................................................................................2311258.00125800540039136931914811128000
....................................................................................................................................CGGACGGTATATGAGTCAATATTA...............................................................................................................................................................................................................2411040.001040001000013713931417922711716000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGT..............................................................................................................................................................2211006.00100611417530051599172104216445000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGC..............................................................................................................................................................221898.0089811526000312850526322700000
....................................................................................................................................CGGACGGTATATGAGTCAAT...................................................................................................................................................................................................................201796.0079602101512146201987017567000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAA............................................................................................................................................................231427.0042702403220391815712111041000
.....................................................................................................................................................................................TATATTGCACATTCACCGGCCTGA..............................................................................................................................................................241376.0037601500011512582460200000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAC.............................................................................................................................................................231367.00367031131200243189491432000
....................................................................................................................................CGGACGGTATATGAGT.......................................................................................................................................................................................................................161349.0034900000054513322000000
.........................................................................................................................................................................................TTGCACATTCACCGGCCTGA..............................................................................................................................................................201321.003210035006511691373100000
.......................................................................................................................................................................................TATTGCACATTCACCGGC..................................................................................................................................................................181317.00317169607912814432424100000
...........................................................................................................................................................................................GCACATTCACCGGCCTGA..............................................................................................................................................................181290.0029001342001625907940300000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAC............................................................................................................................................................241283.0028304142100141775290100000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAT............................................................................................................................................................241280.0028003131005963903601005000
....................................................................................................................................CGGACGGTATATGAGTCAATAA.................................................................................................................................................................................................................221212.0021200000033149402177000
......................................................................................................................................................................................ATATTGCACATTCACCGGCCTGAA.............................................................................................................................................................241207.00207022000352797350036000
....................................................................................................................................CGGACGGTATATGAGTC......................................................................................................................................................................................................................171205.002050000003514192000000
....................................................................................................................................CGGACGGTATATGAGTCA.....................................................................................................................................................................................................................181202.0020201007127311898001000
...................................................................................................................................TCGGACGGTATATGAGTCAATAT.................................................................................................................................................................................................................231189.001890010503239375515014000
....................................................................................................................................CGGACGGTATATGAGTCAA....................................................................................................................................................................................................................191188.00188012010166344110050000
....................................................................................................................................CGGACGGTATATGAGTCAATT..................................................................................................................................................................................................................211167.001670000000000102164000
.............................................................................................................................................................................................ACATTCACCGGCCTGA..............................................................................................................................................................161152.001520000001117552049000000
.....................................................................................................................................GGACGGTATATGAGTCAATATT................................................................................................................................................................................................................221151.0015100010003729361028001000
....................................................................................................................................CGGACGGTATATGAGTCAATATAAA..............................................................................................................................................................................................................251150.00150000100181082336000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAG.............................................................................................................................................................231149.001490434400222133213502000
....................................................................................................................................CGGACGGTATATGAGTCAATATAA...............................................................................................................................................................................................................241129.001290113001612482612109000
..............................................................................................................................................................................................CATTCACCGGCCTGA..............................................................................................................................................................151119.00119000000213730238000000
..........................................................................................................................................................................................TGCACATTCACCGGCCTGA..............................................................................................................................................................191118.00118003100153239187300000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTG...............................................................................................................................................................201113.00113111305205748411124000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAAA...........................................................................................................................................................241108.0010800590022544211100000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAT.............................................................................................................................................................221106.001060313200131238220102000
....................................................................................................................................CGGACGGTATATGAGTCAATATTT...............................................................................................................................................................................................................241104.001040100100178211651124000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAG............................................................................................................................................................24190.0090012310011728140320000
....................................................................................................................................CGGACGGTATATGAGTCAATATA................................................................................................................................................................................................................23188.008800250012895801326000
..........................................................................................................................................GTATATGAGTCAATATT................................................................................................................................................................................................................17186.0086000000000086000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTT...............................................................................................................................................................21185.00850344000000001037000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGATT............................................................................................................................................................24184.008405700019191971115000
.......................................................................................................................................................................................TATTGCACATTCACCGG...................................................................................................................................................................17175.0075000000242311106001000
.....................................................................................................................................................................................TATATTGCACATTCACCGGCCTGAA.............................................................................................................................................................25171.0071000000231721100000000
............................................................................................................................................................................................CACATTCACCGGCCTGA..............................................................................................................................................................17171.007100000013834142000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAC...........................................................................................................................................................25169.0069001400010722160000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGTT.............................................................................................................................................................23162.00620310000222200023000
.........................................................................................................................................................................................TTGCACATTCACCGGCCTGAA.............................................................................................................................................................21159.005900020012181980000000
............................................................................................................................................ATATGAGTCAATATT................................................................................................................................................................................................................15157.0057000000100056000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAAAA..........................................................................................................................................................25151.0051000400872390000000
....................................................................................................................................CGGACGGTATATGAGTCAATATTTAA.............................................................................................................................................................................................................26148.00480000009622101000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAT...........................................................................................................................................................25148.00480033005518120101000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGG..............................................................................................................................................................21146.0046033300031211200000
....................................................................................................................................CGGACGGTATATGAGTCAATATTTAAA............................................................................................................................................................................................................27145.004500000010816110000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCTGA...............................................................................................................................................................21535.40177001000545046250010000
........................................................................................................................................................................................ATTGCACATTCACCGGCC.................................................................................................................................................................18134.00340211016110003000000
....................................................................................................................................CGGACGGTATATGAGTCAATAAA................................................................................................................................................................................................................23132.0032000000211271009000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCGA...............................................................................................................................................................21131.0031000000551470000000
......................................................................................................................................................................................ATATTGCACATTCACCGGCCTGAAA............................................................................................................................................................25130.0030001000531180002000
....................................................................................................................................CGGACGGTATATGAG........................................................................................................................................................................................................................15130.0030000000154317000000
.....................................................................................................................................GGACGGTATATGAGTCAATAT.................................................................................................................................................................................................................21130.003000000023785014000
........................................................................................................................................................................................ATTGCACATTCACCGGCCT................................................................................................................................................................19129.0029000015000527000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTA...............................................................................................................................................................21129.002900010077240026000
...........................................................................................................................................TATATGAGTCAATATT................................................................................................................................................................................................................16126.0026000000201023000000
......................................................................................................................................................................................ATATTGCACATTCACCGGCCTG...............................................................................................................................................................22125.0025002000037200110000
.......................................................................................................................................................................................TATTGCACATTCACCG....................................................................................................................................................................16123.0023000000300317000000
.........................................................................................................................................GGTATATGAGTCAATATT................................................................................................................................................................................................................18122.0022000000100021000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAT............................................................................................................................................................23121.002100000077421000000
....................................................................................................................................CGGACGGTATATGAGTCAAA...................................................................................................................................................................................................................20121.0021000000101110116000
..............................................................................................................................................................................................CATTCACCGGCCTGAA.............................................................................................................................................................16120.0020000000421220000000
...........................................................................................................................................................................................GCACATTCACCGGCCTGAA.............................................................................................................................................................19119.001900100003843000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAG...........................................................................................................................................................25118.001800100034721000000
.....................................................................................................................................GGACGGTATATGAGTCAATATTAA..............................................................................................................................................................................................................24118.001800010030941000000
...........................................................................................................................................................................................GCACATTCACCGGCCTGAAA............................................................................................................................................................20118.001800100000881000000
....................................................................................................................................CGGACGGTATATGAGTCAATATC................................................................................................................................................................................................................23117.001700100051117010000
.....................................................................................................................................GGACGGTATATGAGTCAATATTAAA.............................................................................................................................................................................................................25117.001700020041550000000
....................................................................................................................................CGGACGGTATATGAGTCAATATTC...............................................................................................................................................................................................................24117.001700100012634000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGT..............................................................................................................................................................21117.0017031000100100011000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTTG..............................................................................................................................................................22116.0016001500000000100000
...............................................................................................................................................................................................ATTCACCGGCCTGAA.............................................................................................................................................................15115.001500000022614000000
.....................................................................................................................................................................................TATATTGCACATTCACCGGCCTG...............................................................................................................................................................23115.001500700015200000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTTT..............................................................................................................................................................22114.001401110010010009000
...................................................................................................................................TCGGACGGTATATGAGTCAATA..................................................................................................................................................................................................................22114.001400002024130002000
..........................................................................................................................................GTATATGAGTCAATAT.................................................................................................................................................................................................................16114.0014000000003011000000
..........................................................................................................................................................................................TGCACATTCACCGGCCTGAA.............................................................................................................................................................20113.001300000021820000000
.............................................................................................................................................................................................ACATTCACCGGCCTGAA.............................................................................................................................................................17113.001300000031810000000
droSec2
ATTACT-TTA-AA-A-AGAATCATCATTGAGCAAAGTAAT--------TA-----GTTTTTTTTCCTTGCAATAGGCGGCAAGACTGGAAATT-------------------------TCTAGATAATTTTTCGGACGGTATATGAGTCAATGTTTTCTT--------------TTTCGAATATATTGCACATTCACCGGCCTGAAAATATCAAGAATTAGCATCGAAAA-----------------------AGAAAAA---------------------------TAAAA---------------GT-----------G-CTT-----------------GCAA----AAA--CATAAACASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGA..............................................................................................................................................................22116540.001654013468452699328
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTG...............................................................................................................................................................2111017.001017718626627
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAA.............................................................................................................................................................231904.00904699218518
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGA..............................................................................................................................................................211846.008467950483
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAA............................................................................................................................................................241533.0053340301237
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAT.............................................................................................................................................................231125.00125851345
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGT..............................................................................................................................................................22185.0085597154
.......................................................................................................................................................................................TATTGCACATTCACCGGCCT................................................................................................................................................................20183.0083551252
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAA...........................................................................................................................................................25175.0075541191
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAA.............................................................................................................................................................22159.005956120
....................................................................................................................................CGGACGGTATATGAGTCAATGTT................................................................................................................................................................................................................23148.004840152
.........................................................................................................................................................................................TTGCACATTCACCGGCCTGA..............................................................................................................................................................20143.004336070
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAT............................................................................................................................................................24137.003714311
........................................................................................................................................................................................ATTGCACATTCACCGGCCTG...............................................................................................................................................................20136.003631050
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAA............................................................................................................................................................23129.002928010
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAC.............................................................................................................................................................23121.002117040
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAAA..........................................................................................................................................................26120.002016040
......................................................................................................................................................................................ATATTGCACATTCACCGGCCTGA..............................................................................................................................................................23119.001919000
.......................................................................................................................................................................................TATTGCACATTCACCGGC..................................................................................................................................................................18115.001541100
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAG.............................................................................................................................................................23115.001510050
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGC..............................................................................................................................................................22114.001411030
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGG..............................................................................................................................................................22111.00116050
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTT...............................................................................................................................................................2119.0098010
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGG..............................................................................................................................................................2118.0088000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAT.............................................................................................................................................................2217.0077000
..........................................................................................................................................................................................TGCACATTCACCGGCCTGA..............................................................................................................................................................1917.0077000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAC............................................................................................................................................................2416.0061140
....................................................................................................................................CGGACGGTATATGAGTCAATGT.................................................................................................................................................................................................................2216.0065010
...........................................................................................................................................................................................GCACATTCACCGGCCTGA..............................................................................................................................................................1816.0065010
.....................................................................................................................................GGACGGTATATGAGTCAATGTT................................................................................................................................................................................................................2216.0066000
.......................................................................................................................................................................................TATTGCACATTCACCGGCC.................................................................................................................................................................1915.0053110
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAT...........................................................................................................................................................2515.0050140
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGT..............................................................................................................................................................2114.0043100
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAAA...........................................................................................................................................................2414.0044000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTTT..............................................................................................................................................................2214.0044000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAC.............................................................................................................................................................2213.0033000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGTT.............................................................................................................................................................2313.0031200
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGATT............................................................................................................................................................2413.0031011
...................................................................................................................................TCGGACGGTATATGAGTCAATG..................................................................................................................................................................................................................2212.0020020
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTC...............................................................................................................................................................2112.0021010
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAAT..........................................................................................................................................................2612.0020101
.........................................................................................................................................................................................TTGCACATTCACCGGCCTG...............................................................................................................................................................1912.0021010
....................................................................................................................................CGGACGGTATATGAGTCAATGTTAA..............................................................................................................................................................................................................2512.0021010
....................................................................................................................................CGGACGGTATATGAGTCAATGTTA...............................................................................................................................................................................................................2412.0021010
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTA...............................................................................................................................................................2112.0022000
.........................................................................................................................................................................................TTGCACATTCACCGGCCTGAT.............................................................................................................................................................2112.0022000
...................................................................................................................................TCGGACGGTATATGAGTCAATGT.................................................................................................................................................................................................................2312.0021010
....................................................................................................................................CGGACGGTATATGAGTCAATGTTT...............................................................................................................................................................................................................2412.0022000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAG............................................................................................................................................................2411.0010010
.......................................................................................................................................................................................TATTGCACATTCACCGGCCG................................................................................................................................................................2011.0010001
.....................................................................................................................................GGACGGTATATGAGTCAATGTTT...............................................................................................................................................................................................................2311.0011000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAG...........................................................................................................................................................2511.0011000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCGA...............................................................................................................................................................2111.0011000
.........................................................................................................................................................................................TTGCACATTCACCGGCCTGAA.............................................................................................................................................................2111.0011000
...................................................................................................................................TCGGACGGTATATGAGTCAATGTAA...............................................................................................................................................................................................................2511.0011000
....................................................................................................................................CGGACGGTATATGAGTCAATGTTTT..............................................................................................................................................................................................................2511.0011000
......................................................................................................................................................................................ATATTGCACATTCACCGGCCTGAAA............................................................................................................................................................2511.0011000
...................................................................................................................................................................................AATATATTGCACATTCACCGG...................................................................................................................................................................2111.0011000
..........................................................................................................................................................................................TGCACATTCACCGGCCTGAA.............................................................................................................................................................2011.0011000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTTC..............................................................................................................................................................2111.0011000
droYak3
AAAAAT------------------------------------------------------------------------------ATCTCACTT-------------------------TCTAGATAGTTTTGCGGACGGTATCTGCGTCAATATTTCCTT--------------GTTAGAATATATTGCACATTCACCGGCCTGAAAATATCAAGGACTTGCATCGAAAA-----------------------------------------------------------------------------GT-----------G-CTT-----------------GCAA----ATA--CACAAACASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGA..............................................................................................................................................................22129661.0029661307935114039587814114201018
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAA.............................................................................................................................................................2313321.0033212174523541990011000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTG...............................................................................................................................................................2112270.0022709395266554511130000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAA............................................................................................................................................................2411775.00177596971008561040000
.......................................................................................................................................................................................TATTGCACATTCACCGGCC.................................................................................................................................................................1911175.001175387112720000010
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGA..............................................................................................................................................................211670.00670059162170000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAT.............................................................................................................................................................231549.0054932242249210131000
....................................................................................................................................CGGACGGTATCTGCGTCAATATT................................................................................................................................................................................................................231219.00219012677140020000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAA...........................................................................................................................................................251189.0018901146770010000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGT..............................................................................................................................................................221162.001622843422502220000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAC.............................................................................................................................................................231134.0013442110720000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCT................................................................................................................................................................201133.00133156311600360200
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGG..............................................................................................................................................................221123.00123643011180000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGC..............................................................................................................................................................22195.00953351380000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAT............................................................................................................................................................24179.007932046100000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAA.............................................................................................................................................................22178.00780482910000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAA............................................................................................................................................................23166.00660531300000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTG...............................................................................................................................................................20162.0062058400000000
.........................................................................................................................................................................................TTGCACATTCACCGGCCTGA..............................................................................................................................................................20137.0037028900000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAAA..........................................................................................................................................................26129.0029025400000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAT.............................................................................................................................................................22127.00271151100000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGATT............................................................................................................................................................24125.002567750000000
....................................................................................................................................CGGACGGTATCTGCGTCAATAT.................................................................................................................................................................................................................22123.0023071050010000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAC............................................................................................................................................................24123.0023041810000000
..............................................................................................................................................................................................CATTCACCGGCCTGA..............................................................................................................................................................15122.0022000000000022
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAG.............................................................................................................................................................23120.002019820000000
...........................................................................................................................................................................................GCACATTCACCGGCCTGA..............................................................................................................................................................18119.0019110440000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAG............................................................................................................................................................24119.001917830000000
......................................................................................................................................................................................ATATTGCACATTCACCGGCCTGA..............................................................................................................................................................23115.0015012210000000
.....................................................................................................................................GGACGGTATCTGCGTCAATATT................................................................................................................................................................................................................22113.0013013000000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGTT.............................................................................................................................................................23111.001192000000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCC................................................................................................................................................................20111.0011001100000000
..........................................................................................................................................................................................TGCACATTCACCGGCCTGA..............................................................................................................................................................1919.00907200000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGACT............................................................................................................................................................2418.00823200010000
....................................................................................................................................CGGACGGTATCTGCGTCAATATTAA..............................................................................................................................................................................................................2517.00703310000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAC...........................................................................................................................................................2517.00702500000000
....................................................................................................................................CGGACGGTATCTGCGTCAATATTA...............................................................................................................................................................................................................2416.00605010000000
.........................................................................................................................................................................................TTGCACATTCACCGGCCTGAA.............................................................................................................................................................2116.00601500000000
.......................................................................................................................................................................................TATTGCACATTCACCGGC..................................................................................................................................................................1816.00600320010000
....................................................................................................................................CGGACGGTATCTGCGTCAATA..................................................................................................................................................................................................................2116.00601211010000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTT...............................................................................................................................................................2115.00504100000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAC.............................................................................................................................................................2215.00504100000000
....................................................................................................................................CGGACGGTATCTGCGTCAAT...................................................................................................................................................................................................................2015.00520300000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAAA...........................................................................................................................................................2415.00504100000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCT................................................................................................................................................................1915.00505000000000
.........................................................................................................................................................................................TTGCACATTCACCGGCCTG...............................................................................................................................................................1915.00504100000000
....................................................................................................................................CGGACGGTATCTGCGTCAATATC................................................................................................................................................................................................................2314.00400400000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAT............................................................................................................................................................2314.00404000000000
.........................................................................................................................................................................................TTGCACATTCACCGGCCTGAAA............................................................................................................................................................2214.00402200000000
.............................................................................................................................................................................................ACATTCACCGGCCTGAAA............................................................................................................................................................1814.00401300000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTA...............................................................................................................................................................2113.00312000000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAGT............................................................................................................................................................2413.00310100010000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGT..............................................................................................................................................................2113.00303000000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGATT............................................................................................................................................................2313.00302100000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAG.............................................................................................................................................................2213.00303000000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAG...........................................................................................................................................................2513.00300210000000
......................................................................................................................................................................................ATATTGCACATTCACCGGCCTG...............................................................................................................................................................2212.00202000000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGTC.............................................................................................................................................................2312.00210010000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAAT..........................................................................................................................................................2612.00201100000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAT...........................................................................................................................................................2512.00201100000000
droEre2
TAAAAA-C------------------------------------------AG-TT-------------------------GAAACCC-CTAAC-------------------------CCTAGATAGTTTTTCGGACGGTATCTGCGTCAATATTTCCTT--------------GTTAGAATATATTGCACATTCACCGGCCTGAAAATATCAAGGACTTACATCAAAAA-----------------------------------------------------------------------------GT-------------CTT-----------------GCAA----ATA--CACAAATASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGA..............................................................................................................................................................22115392.0015392134301010185929594
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAA............................................................................................................................................................2411960.001960188649081016
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTG...............................................................................................................................................................2111896.00189617215707214320
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAA.............................................................................................................................................................2311587.00158713861260340635
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGA..............................................................................................................................................................211604.00604600400000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAA...........................................................................................................................................................251419.00419413202002
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAT.............................................................................................................................................................231303.0030323412036939
.......................................................................................................................................................................................TATTGCACATTCACCGGCCT................................................................................................................................................................201192.001921613025615
....................................................................................................................................CGGACGGTATCTGCGTCAATATT................................................................................................................................................................................................................232126.502531875042055
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAA............................................................................................................................................................231103.00103102100000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGT..............................................................................................................................................................22198.00986612315110
........................................................................................................................................................................................ATTGCACATTCACCGGCCTG...............................................................................................................................................................20182.008281000100
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAAA..........................................................................................................................................................26181.008180100000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAA.............................................................................................................................................................22176.007674100100
.......................................................................................................................................................................................TATTGCACATTCACCGGCC.................................................................................................................................................................19159.0059134400011
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAC.............................................................................................................................................................23132.003227401000
.........................................................................................................................................................................................TTGCACATTCACCGGCCTGA..............................................................................................................................................................20127.002726100000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAT............................................................................................................................................................24124.002414403030
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTT...............................................................................................................................................................21123.002323000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAAA...........................................................................................................................................................24119.001919000000
....................................................................................................................................CGGACGGTATCTGCGTCAATAT.................................................................................................................................................................................................................22218.503735010100
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGC..............................................................................................................................................................22117.00177307000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAT.............................................................................................................................................................22116.001616000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAG............................................................................................................................................................24115.001514000100
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGG..............................................................................................................................................................22114.00149104000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAG.............................................................................................................................................................23112.001211000100
.....................................................................................................................................GGACGGTATCTGCGTCAATATT................................................................................................................................................................................................................22211.502321000002
......................................................................................................................................................................................ATATTGCACATTCACCGGCCTGA..............................................................................................................................................................23110.00109100000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAC............................................................................................................................................................2419.0099000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGG..............................................................................................................................................................2119.0099000000
....................................................................................................................................CGGACGGTATCTGCGTCAATATTT...............................................................................................................................................................................................................2428.001620000014
....................................................................................................................................CGGACGGTATCTGCGTCAATATTAAA.............................................................................................................................................................................................................2627.001414000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAC...........................................................................................................................................................2517.0077000000
.......................................................................................................................................................................................TATTGCACATTCACCGGC..................................................................................................................................................................1817.0072200120
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGATT............................................................................................................................................................2416.0065000010
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGTT.............................................................................................................................................................2316.0063000030
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTA...............................................................................................................................................................2116.0066000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAAAA..........................................................................................................................................................2516.0066000000
....................................................................................................................................CGGACGGTATCTGCGTCAATATTA...............................................................................................................................................................................................................2425.501110000100
......................................................................................................................................................................................ATATTGCACATTCACCGGCCTG...............................................................................................................................................................2215.0055000000
....................................................................................................................................CGGACGGTATCTGCGTCAATATTAA..............................................................................................................................................................................................................2525.00109100000
........................................................................................................................................................................................ATTGCACATTCACCGGCCT................................................................................................................................................................1915.0055000000
..........................................................................................................................................................................................TGCACATTCACCGGCCTGA..............................................................................................................................................................1914.0044000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCC................................................................................................................................................................2014.0040400000
....................................................................................................................................CGGACGGTATCTGCGTCAATA..................................................................................................................................................................................................................2124.0083010400
....................................................................................................................................CGGACGGTATCTGCGTCAAT...................................................................................................................................................................................................................2023.5075000200
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAAAG.........................................................................................................................................................2713.0033000000
....................................................................................................................................CGGACGGTATCTGCGTCAATATA................................................................................................................................................................................................................2323.0065000100
...........................................................................................................................................................................................GCACATTCACCGGCCTGA..............................................................................................................................................................1813.0033000000
.........................................................................................................................................................................................TTGCACATTCACCGGCCTGAAA............................................................................................................................................................2213.0032100000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAT...........................................................................................................................................................2513.0033000000
....................................................................................................................................CGGACGGTATCTGCGTCAATATAAA..............................................................................................................................................................................................................2522.5055000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGATC............................................................................................................................................................2412.0021100000
.........................................................................................................................................................................................TTGCACATTCACCGGCCTGAAAA...........................................................................................................................................................2312.0022000000
..........................................................................................................................................................................................TGCACATTCACCGGCCTGAAA............................................................................................................................................................2112.0022000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTTT..............................................................................................................................................................2212.0022000000
.........................................................................................................................................................................................TTGCACATTCACCGGCCTG...............................................................................................................................................................1912.0022000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGTTT............................................................................................................................................................2412.0021000010
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAAC..........................................................................................................................................................2612.0022000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGACT............................................................................................................................................................2412.0022000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAAG............................................................................................................................................................2312.0022000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAG...........................................................................................................................................................2512.0022000000
.........................................................................................................................................................................................TTGCACATTCACCGGCCTGAA.............................................................................................................................................................2112.0022000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGAC.............................................................................................................................................................2212.0022000000
....................................................................................................................................CGGACGGTATCTGCGTCAATATTTCC.............................................................................................................................................................................................................2622.0044000000
........................................................................................................................................................................................ATTGCACATTCACCGGCCTGT..............................................................................................................................................................2112.0022000000
.....................................................................................................................................GGACGGTATCTGCGTCAATAT.................................................................................................................................................................................................................2122.0044000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTTG..............................................................................................................................................................2212.0020002000
.....................................................................................................................................GGACGGTATCTGCGTCAATA..................................................................................................................................................................................................................2021.5033000000
.....................................................................................................................................GGACGGTATCTGCGTCAATATTAAA.............................................................................................................................................................................................................2521.5033000000
......................................................................................................................................GACGGTATCTGCGTCAATATT................................................................................................................................................................................................................2121.5033000000
....................................................................................................................................CGGACGGTATCTGCGTCAATATAA...............................................................................................................................................................................................................2421.5033000000
.......................................................................................................................................................................................TATTGCACATTCACCGGCCTGAAAATA.........................................................................................................................................................2711.0011000000
...........................................................................................................................................................................................GCACATTCACCGGCCTGAAA............................................................................................................................................................2011.0011000000
droPer2
AAAAAC-A-ATAG-CAA-CGCCGGCA----------A-----------C---------------------------------------------AGCAAAGTAT--------------GT---ACAATTAT---------------------------------------------TCAAAGAATCTTCACATTT------------------------TTCATGAATTA------------------------TAAA---------------------------CACAAAAATACAT----CCATAGTGTGCGGAGTATG-CGCTGTGC------------ATTT----GTA--CACCAACASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
No Reads
droVir3
TGAAAAGTTA--A-----AGCT-GGA----------AAAA--------------------------------------------CTAGTGCGTCC-----------------------GCATGACCATTTTAAGGACGGTATTTGTGACAATATGTGCAGTT-AAATCAATT--TGTTTAGCATATTGCACATCTCCCGGCCTAAAAATGAACCGTGCTCTCTTCGATAT-----------------------ATGGAAC------A-T------------------TAAAA-CAATTTGGTAAATACTGCGCATAG---C-CTT-----------------GCGC---CTTA--TGTAATCASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
....................................................................................................................................AGGACGGTATTTGTGACAATATG................................................................................................................................................................................................................231406466.0040646656081293295393562543545057487452860961000106180014621860164760294839103977833297219447315391883290324184068921345433221015412011557145761015238323210109133163114011621385396153996748994257932452714688187791948725355332939707106472473530218
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAA..............................................................................................................................................................221348798.00348798701134097784558382125665541455927411304031294088035535434388357186252813397542114783080792967407980764981698103223922075130095097978350810322955782391521321027342830746382821487442597678748996740996372812042422519261182952491722908320256896853
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAA.............................................................................................................................................................231183276.0018327640473545184123102922011268458430100053400125295119903379203794252530888060002155093675962361872809326741637441315259254173352701477438292602388319814022812335108251036583971259311129543169737129840783586062533965669049
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTA...............................................................................................................................................................212112732.5022546537111924658645426728236134151102029171410501297123211013186263741933078175412487461946719923775757229904369581687194142034332738217816421852149999919065371013430289257196684287281090931010415888770655139811777116133117999614136751269440972662354058975217
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAA............................................................................................................................................................241103384.0010338461279496624131704222232300000040040130264315115041076837133226041774205650602011181019544531515513910160621392146239107114534600014171077944686916004392136301949236521152809558668235992744610511
....................................................................................................................................AGGACGGTATTTGTGACAATAT.................................................................................................................................................................................................................22191860.009186046513287190157726823142112628000001602132551775223512501831072622594314177619357146851811581239110870681045811975353639011521627030295257121541216113262225424201270172015742311110623226344878509821
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAA...........................................................................................................................................................25160457.00604572119021807030304410570000001001675233097317715155261107175410042984796101245130803715137521577230002122100099564064135831363568868039343436047132825678502257118535
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCT................................................................................................................................................................20248401.00968021497810016384631383593013428162111882113040214735411406160910151794932949799452115523322943118205268292461324728837187375462746440735228157718230616911484797412820774952001019964735594439816021403108910861337156443032656295955326040
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAA..........................................................................................................................................................26119354.0019354006823920003003351000000000725511840043111531702372558861833909181031002200210100024000449291205018541023117130707664999571995180619602845
....................................................................................................................................AGGACGGTATTTGTGACAATATA................................................................................................................................................................................................................2319847.009847271171000010065770000001001151532233462230211445281062154989055545540102334334161912011156100022812791241141219818510215313316310793543748611032
....................................................................................................................................AGGACGGTATTTGTGACAATA..................................................................................................................................................................................................................2118564.0085641130231202011320420000000001355613135186123840025634925221719102211593741117260000712817842855815747430549561545749121123313486
....................................................................................................................................AGGACGGTATTTGTGACAATATGA...............................................................................................................................................................................................................2417654.007654803711604140334800000020047564178120271592412131051572611371731200010201100000011500031401338137193621208151324626229234611711
....................................................................................................................................AGGACGGTATTTGTGACAATATGTG..............................................................................................................................................................................................................2516377.00637700650878425109115877110001016300781872261118105110675381196165361364458300200000000100000000204012619614611316728426114118621231312225295877
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAAA.........................................................................................................................................................2715469.0054690031981000000012000000000009843160190001920104602934890160000010001000000210001921045274692402522811914227553526510753
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAT.............................................................................................................................................................2314335.0043350017311130000002120000000000444406148232141891087621161041218128811143683821130021800028581681361564464442333083103121619576125135
....................................................................................................................................AGGACGGTATTTGTGACAATATGT...............................................................................................................................................................................................................2413802.003802150178516438227614290000006009253412110311107174203047795112236414386074593330016100001923451382339144155134115841402888578211281
....................................................................................................................................AGGACGGTATTTGTGACAATATGAAA.............................................................................................................................................................................................................2613794.0037940039230202096338000000000346412365810219108511034184230001000000001000000170006632631565306811631462057686238305
....................................................................................................................................AGGACGGTATTTGTGACAATATAAA..............................................................................................................................................................................................................2513032.003032004612010101220600000000066617165321213740536040456240121010001000000000040005215470466214103112117867106177215
.......................................................................................................................................................................................TATTGCACATCTCCCGGCC.................................................................................................................................................................1922906.505813621296120173723020910000011500537534492130301625669745815647515214635212018141526712762600511710115692421171836156114284654744111702846171149
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAG.............................................................................................................................................................2312692.00269230713920000001800000000005212542212818836681473910352321145211102222010100060001013181163157173150879011912717292112150212
....................................................................................................................................AGGACGGTATTTGTGACAATATGAA..............................................................................................................................................................................................................2512569.00256920123100010016500000000012121904331027205783216857001010010200001000012000231243541122918208135181816477133180
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAC.............................................................................................................................................................2312489.002489002643111000106000000070131188133209130111318132031210648535210111002130002513712619118917986129121144166171182173206
....................................................................................................................................AGGACGGTATTTGTGACAATATAA...............................................................................................................................................................................................................2412017.002017101602001000456000000000641261154546111731636134895100010011000000000000000102118247242144054103105463588113
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAC..............................................................................................................................................................2221958.503917804923541921100030200100001600331312188572624618123114304412221242321010000031000089128941341561404865831118915212831
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAC............................................................................................................................................................2411569.001569201325100000013000000000014322103777145963097223256021120300011300056151128133293126273034112152154158206
........................................................................................................................................................................................ATTGCACATCTCCCGGCCTAA..............................................................................................................................................................2111405.001405001116541000000012000000000061115310313061010820010100000100000000010000856221182410211932342
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAC...........................................................................................................................................................2511346.0013460067000000002000000000002040000050161512003310010100100000000000001141251364152528102131141237263
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAT............................................................................................................................................................2411133.0011330024340000000010000000100011989111262125015174827000411935304251000000000004847634810662285532745368524859
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAG............................................................................................................................................................2411131.00113100231200000000400000010000348521021101613251240135132031041000001010004784807473412939476669726192121
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAC..........................................................................................................................................................261865.00865009400000000000000000001301000001012611001100000001000000000000017769592200015191115185179
........................................................................................................................................................................................ATTGCACATCTCCCGGCCTAAA.............................................................................................................................................................221811.008110062055000000002000000000002581330190106231210000000001000000000000000333258244312324
....................................................................................................................................AGGACGGTATTTGTGACAATATT................................................................................................................................................................................................................231735.007356042201000132200000010041233131751324220299348451368352300214140000475891028141791686821184658
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCA................................................................................................................................................................202635.0012700023017203030111930000002001025828923311412316146327610200020010200000000610008163147831231037713113134
.......................................................................................................................................................................................TATTGCACATCTCCCGGC..................................................................................................................................................................182627.5012551401828030305050000000200124724303411751052369551014414014323121000000020111001408936102754564859542934495649
....................................................................................................................................AGGACGGTATTTGTGACAA....................................................................................................................................................................................................................191607.006071004012100300000000001003709116105142050220017130023012010000030000011925181069139585238203177
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTT...............................................................................................................................................................212557.5011151602239370102002210000005006161415133627163915220154175525984443102520210035500013271912454954395949464197
....................................................................................................................................AGGACGGTATTTGTGACAAT...................................................................................................................................................................................................................201509.0050910172311012004001000070034811616231121727315112411000001100000100000000437775306201022517132926
....................................................................................................................................AGGACGGTATTTGTGACA.....................................................................................................................................................................................................................181447.004471003030211120130000003003127355462143484200100000000000000000000424440421341179181944372722
.......................................................................................................................................ACGGTATTTGTGACAATATG................................................................................................................................................................................................................201394.003942020000000010000000000011013000000002000000000000000000000000000044971673452408270056
........................................................................................................................................................................................ATTGCACATCTCCCGGCCTA...............................................................................................................................................................202393.5078710641270000000020000000000112220002509856100000000210201000000200002032381276811362
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAAC.........................................................................................................................................................271378.00378004100000000000000000000002000002011101002000100001000000000000003726200000002249506493
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTG...............................................................................................................................................................212373.5074710018900000020000000000001113731411241162145276148232413503000000017000139595413624277123271551721
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAG..............................................................................................................................................................222362.0072470602720200000510000004003135127415811100581710712111021020110100014200079403330344019818272037384753
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAT...........................................................................................................................................................251353.0035300611000000003000000000006140010480111227310011100000000001000300001432242132266153825181734
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTC...............................................................................................................................................................212344.5068912115010337710020120000000420052534122121119326315063200693141331200100020110600045311142013171163110
....................................................................................................................................AGGACGGTATTTGTGACAATATGTAA.............................................................................................................................................................................................................261304.003040050100000010000000000007424701011401618381620000001000000000000010002032271801000026351518
....................................................................................................................................AGGACGGTATTTGTGACAATATC................................................................................................................................................................................................................231304.003041904300000100100000000000123334522000010031384656172313635002140000221011017171716221875014
........................................................................................................................................................................................ATTGCACATCTCCCGGCCT................................................................................................................................................................192295.005900052691000100041000000000020310000401410340000010000010000000000000013102010010032
........................................................................................................................................................................................ATTGCACATCTCCCGGCCTAAAA............................................................................................................................................................231294.00294002156000000000000000000002130000040359800000000000000000000000004123121310213365
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCC................................................................................................................................................................202286.5057313022286500000011200000010021010220241005060030110102000000000160000041216897120112132510
...................................................................................................................................AAGGACGGTATTTGTGACAATAT.................................................................................................................................................................................................................231252.002520020000030200000000000002010010010131000010001000000000000000002028143017171014121522451726
....................................................................................................................................AGGACGGTATTTGTGACAATATGC...............................................................................................................................................................................................................241244.0024440150000010010000000000010454333003212100601000210010100010000006181021241210121127934317
....................................................................................................................................AGGACGGTATTTGTGACAATATGTA..............................................................................................................................................................................................................251239.002390220000000100000000000000267000140737110000000000000000000000004138332648009328108167
....................................................................................................................................AGGACGGTATTTGTGACAATAA.................................................................................................................................................................................................................221231.002311050011102001000000000014142252315355132810200000000000000000000101000141110341100124556
....................................................................................................................................AGGACGGTATTTGTGACAATATGTGA.............................................................................................................................................................................................................261222.00222000000000000000000010000331012010050753700000000000000000000000001028243233301321742015
.....................................................................................................................................GGACGGTATTTGTGACAATATG................................................................................................................................................................................................................221221.00221001471000000000000000000001045100220215120000000000000000000000001021034531614277
....................................................................................................................................AGGACGGTATTTGTGACAATAAA................................................................................................................................................................................................................231216.0021650111000000022000000000010747443205213110000000000010000000010004036311031120111681618
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAT..........................................................................................................................................................261201.002010043000000001000000000003040000100191720000001000000000000000000132024163210131018171818
........................................................................................................................................................................................ATTGCACATCTCCCGGCCTAAAAA...........................................................................................................................................................241189.001890015300000000000000000000020001000100011100000000000000000000000003001130100013223
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAACA..........................................................................................................................................................261188.001880000000000000000000000000000000000121789111000000000000000000000000108360100021063117
..................................................................................................................................TAAGGACGGTATTTGTGACAATAT.................................................................................................................................................................................................................241185.00185101000004020100000000000131200000011002000001000000000000000000011083972374636951215
.........................................................................................................................................................................................TTGCACATCTCCCGGCCTAA..............................................................................................................................................................201177.001770074171000000010000000000141741001905109900000000000000000000000002020025422010012
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAG...........................................................................................................................................................252159.00318008300000000000000000000301110005044102001200000000000000000100021282221261078892320222936
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAAAC........................................................................................................................................................281151.0015100320000000000000000000000000000100030000000100000000000000000000161417100000710142834
.........................................................................................................................................................................................TTGCACATCTCCCGGCCTAAA.............................................................................................................................................................211145.0014500511500000001100000000001632210107012871000000000000000000000000001022200311021002
...................................................................................................................................AAGGACGGTATTTGTGACAATATG................................................................................................................................................................................................................241143.00143001001000000010000000000001100000011210001000000102010000000000015924194612313132296
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAATC............................................................................................................................................................241135.0013540113000000000000000020000000592901000000043411112000010100000000220013107562010301
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAATT............................................................................................................................................................241128.00128005400000000000000000000111100001000100000000010100000000000000212171721101371771113
......................................................................................................................................GACGGTATTTGTGACAATATG................................................................................................................................................................................................................211106.0010600800000000000000000000000210000001100000000000000000000000000000879796386514614
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAACA.........................................................................................................................................................271104.001040000000000000000000000000000000000613296000000000000000000001000000643010000448613
....................................................................................................................................AGGACGGTATTTGTGACAATATGG...............................................................................................................................................................................................................241102.00102101000000000000000000001000000000000000000000000000000000001000011415220001121039119
....................................................................................................................................AGGACGGTATTTGTGACAATATCC...............................................................................................................................................................................................................241102.00102280800300000000000000000000204555000000001000000000000000000000001000538311820000
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAG..........................................................................................................................................................26193.009300600000000000000000000010010000000141001000000000000000000000012485223402557919
........................................................................................................................................CGGTATTTGTGACAATATG................................................................................................................................................................................................................19192.009200100000000000000000100000110000000010000000000000000000000000000101221171871700201
.......................................................................................................................................................................................TATTGCACATCTCCCGG...................................................................................................................................................................17285.0017000000000000000000000000000000000000000000000000000000000000000030151114000000183102967
....................................................................................................................................AGGACGGTATTTGTGACAATATGTGT.............................................................................................................................................................................................................26184.00840000000030021300000000000174010040312000001000100000000000000000055453122652208
........................................................................................................................................................................................ATTGCACATCTCCCGGCCTAAAAAA..........................................................................................................................................................25183.008300711000000000000000000000000000000003000000000000000000000000000010000000000025
...........................................................................................................................................................................................GCACATCTCCCGGCCTAA..............................................................................................................................................................18182.0082002620000000001000000100031100101003022000000000000000000000000071500012105130120
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCG................................................................................................................................................................20281.5016310031000000000000000010000100000000000030196813706302024001410100025598105141360062
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAAAAAAT.........................................................................................................................................................27181.00810060000000002000000000000110000030106200010000000000000000000000213810000014611210
....................................................................................................................................AGGACGGTATTTGTGACAATATGTC..............................................................................................................................................................................................................25180.00801000000000000000000000000010001000000000000010001100000001010000000015971581800000
....................................................................................................................................AGGACGGTATTTGTGAC......................................................................................................................................................................................................................17176.00760000000000000000000000000000000000000000000000100000000000000000081119000000181189
droMoj3
AGTAAGTTTC-AA-A-AGAAAAAACG----------AAAA--------AT----------------------------------GTCAAATTT-------------------------TCAGCTGCGTTTGCAGGACGGTATTTGTGACAATATGAATTATTGAAATCAATT--TATTCAGCATATTGCACATCTCCCGGCCTATAAAACAGTTGTGAGCCCGTCGATTT-----------------------AAATGATTTGTGTATTTAAAATAAATTTTCACCATAA-----------------AT-----------A--TC-----------------GTTT----AAA--TGTATCCASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAT..............................................................................................................................................................22198033.009803342391253110165302857
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTA...............................................................................................................................................................21217548.5035097120312076211720844108
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTATA.............................................................................................................................................................23110954.001095425072710081733
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCT................................................................................................................................................................2028204.5016409741293828447799188
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAA............................................................................................................................................................2414601.0046011728871127831
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAAA...........................................................................................................................................................2513822.0038223212750351319
........................................................................................................................................................................................ATTGCACATCTCCCGGCCTAT..............................................................................................................................................................2112956.00295622762006780
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTATT.............................................................................................................................................................2312262.002262755170114881
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAA..............................................................................................................................................................2221986.0039721546771123452
....................................................................................................................................AGGACGGTATTTGTGACAATATG................................................................................................................................................................................................................2311845.00184510291530264219
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAAAA..........................................................................................................................................................2611390.00139013091400616
....................................................................................................................................AGGACGGTATTTGTGACAATAT.................................................................................................................................................................................................................2211011.00101127176106621
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCC................................................................................................................................................................202903.501807310018030
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAAAAA.........................................................................................................................................................271662.0066265400062
.......................................................................................................................................................................................TATTGCACATCTCCCGGCC.................................................................................................................................................................192434.5086916512016892
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTATC.............................................................................................................................................................231417.004172072002035
........................................................................................................................................................................................ATTGCACATCTCCCGGCCTA...............................................................................................................................................................202389.507796025001684
.........................................................................................................................................................................................TTGCACATCTCCCGGCCTAT..............................................................................................................................................................201288.002881390001490
........................................................................................................................................................................................ATTGCACATCTCCCGGCCTATA.............................................................................................................................................................221249.002491270001220
........................................................................................................................................................................................ATTGCACATCTCCCGGCCT................................................................................................................................................................192233.50467379010870
........................................................................................................................................................................................ATTGCACATCTCCCGGCCTATAAA...........................................................................................................................................................241205.0020519610080
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTATG.............................................................................................................................................................231167.0016785500770
........................................................................................................................................................................................ATTGCACATCTCCCGGCCTATAA............................................................................................................................................................231157.00157107100490
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTT...............................................................................................................................................................212144.5028914710011265
.....................................................................................................................................GGACGGTATTTGTGACAATATG................................................................................................................................................................................................................221116.0011611500010
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTC...............................................................................................................................................................212102.502051491301366
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAT............................................................................................................................................................24189.008925000640
....................................................................................................................................AGGACGGTATTTGTGACAATATA................................................................................................................................................................................................................23186.008623500580
........................................................................................................................................................................................ATTGCACATCTCCCGGCCTATT.............................................................................................................................................................22182.008254000280
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCA................................................................................................................................................................20281.00162117301410
......................................................................................................................................................................................ATATTGCACATCTCCCGGCCTAT..............................................................................................................................................................23180.00807600040
....................................................................................................................................AGGACGGTATTTGTGACAATA..................................................................................................................................................................................................................21179.007924200521
........................................................................................................................................................................................ATTGCACATCTCCCGGCCTATAAAA..........................................................................................................................................................25171.00716700040
..........................................................................................................................................................................................TGCACATCTCCCGGCCTAT..............................................................................................................................................................19154.005430200220
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTAG..............................................................................................................................................................22253.0010664400353
........................................................................................................................................................................................ATTGCACATCTCCCGGCCTAA..............................................................................................................................................................21252.5010576000290
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTATTT............................................................................................................................................................24146.00469000361
...........................................................................................................................................................................................GCACATCTCCCGGCCTAT..............................................................................................................................................................18144.004429000150
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTATCC............................................................................................................................................................24143.00434200010
......................................................................................................................................................................................ATATTGCACATCTCCCGGCCT................................................................................................................................................................21242.008422501560
....................................................................................................................................AGGACGGTATTTGTGACAATATGA...............................................................................................................................................................................................................24139.003916500180
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAC............................................................................................................................................................24139.003912200250
.....................................................................................................................................GGACGGTATTTGTGACAATAT.................................................................................................................................................................................................................21138.00383700010
....................................................................................................................................AGGACGGTATTTGTGACAATAC.................................................................................................................................................................................................................22130.00300000300
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAG............................................................................................................................................................24130.00301920081
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTATTC............................................................................................................................................................24130.003018000111
.......................................................................................................................................................................................TATTGCACATCTCCCGGC..................................................................................................................................................................18228.505740400130
....................................................................................................................................AGGACGGTATTTGTGACAATATGC...............................................................................................................................................................................................................24128.00287300180
.........................................................................................................................................................................................TTGCACATCTCCCGGCCTA...............................................................................................................................................................19227.505534000210
........................................................................................................................................................................................ATTGCACATCTCCCGGCCTATAAAAA.........................................................................................................................................................26127.00272700000
....................................................................................................................................AGGACGGTATTTGTGACAATATGAAA.............................................................................................................................................................................................................26127.00272430000
.........................................................................................................................................................................................TTGCACATCTCCCGGCCTATA.............................................................................................................................................................21127.002711000160
.........................................................................................................................................................................................TTGCACATCTCCCGGCCT................................................................................................................................................................18223.504724000230
....................................................................................................................................AGGACGGTATTTGTGACAAT...................................................................................................................................................................................................................20123.002311100110
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTG...............................................................................................................................................................21222.00449200330
.........................................................................................................................................................................................TTGCACATCTCCCGGCCTATAA............................................................................................................................................................22120.00207000130
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAAT...........................................................................................................................................................25120.002010000100
....................................................................................................................................AGGACGGTATTTGTGACAATATGT...............................................................................................................................................................................................................24120.00207200110
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAAAT..........................................................................................................................................................26118.00181100070
........................................................................................................................................................................................ATTGCACATCTCCCGGCCC................................................................................................................................................................19215.50310000310
....................................................................................................................................AGGACGGTATTTGTGACAATAAA................................................................................................................................................................................................................23115.00151210020
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTATAAC...........................................................................................................................................................25115.00154000110
....................................................................................................................................AGGACGGTATTTGTGACAATATGAA..............................................................................................................................................................................................................25113.0013460030
......................................................................................................................................GACGGTATTTGTGACAATATG................................................................................................................................................................................................................21113.00131100020
........................................................................................................................................................................................ATTGCACATCTCCCGGCCTATC.............................................................................................................................................................22113.00131200010
.........................................................................................................................................................................................TTGCACATCTCCCGGCCTATAAA...........................................................................................................................................................23112.00121200000
....................................................................................................................................AGGACGGTATTTGTGACAATATGCC..............................................................................................................................................................................................................25112.0012300090
....................................................................................................................................AGGACGGTATTTGTGACAATAA.................................................................................................................................................................................................................22111.0011810011
......................................................................................................................................................................................ATATTGCACATCTCCCGGCCTA...............................................................................................................................................................22210.50211200090
.......................................................................................................................................................................................TATTGCACATCTCCCGGCCTATCCC...........................................................................................................................................................25110.00101000000
..........................................................................................................................................................................................TGCACATCTCCCGGCCTATA.............................................................................................................................................................20110.0010300070
droGri2
CAGTTA-T-C-TG-CATT--------------------------------------------------------------------------------------------------------AACCATTTTCAGGATGGAAGCTGTGACAATATGTAGGTTT-TAATTAATTTATATTTCATATATTGCACACCTCCCGGCCTATAAATGATTCTTGAGCTCCTCGATTT--------------------TGTT-------TATATATC-------------------TAAA---------------GTGT-----------TGA-AAATTGGAAAGCGTCAACT-----AAT--TGTGGACASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.......................................................................................................................................................................................TATTGCACACCTCCCGGCCTAT..............................................................................................................................................................22120.0020200
.......................................................................................................................................................................................TATTGCACACCTCCCGGCCT................................................................................................................................................................2019.00990
.......................................................................................................................................................................................TATTGCACACCTCCCGGCCTA...............................................................................................................................................................2115.00550
....................................................................................................................................AGGATGGAAGCTGTGACAATAT.................................................................................................................................................................................................................2215.00505
....................................................................................................................................AGGATGGAAGCTGTGACAATATG................................................................................................................................................................................................................2314.00404
.......................................................................................................................................................................................TATTGCACACCTCCCGGCCTT...............................................................................................................................................................2113.00330
....................................................................................................................................AGGATGGAAGCTGTGACAAT...................................................................................................................................................................................................................2013.00312
....................................................................................................................................AGGATGGAAGCTGTGACAA....................................................................................................................................................................................................................1912.00211
....................................................................................................................................AGGATGGAAGCTGTGACAATA..................................................................................................................................................................................................................2112.00202
........................................................................................................................................................................................ATTGCACACCTCCCGGCCT................................................................................................................................................................1912.00220
........................................................................................................................................................................................ATTGCACACCTCCCGGCCTAT..............................................................................................................................................................2111.00110
.......................................................................................................................................................................................TATTGCACACCTCCCGGCC.................................................................................................................................................................1911.00110
....................................................................................................................................AGGATGGAAGCTGTGACAATATGT...............................................................................................................................................................................................................2411.00101
........................................................................................................................................................................................ATTGCACACCTCCCGGCCTA...............................................................................................................................................................2011.00110
....................................................................................................................................AGGATGGAAGCTGTGACA.....................................................................................................................................................................................................................1811.00101

Generated: 10/20/2015 at 07:37 PM