ID:

dan-mir-308

 Coordinate:

scaffold_13266:5819969-5820030 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.9 -29.9 -29.6

Flybase annnotation

intron [Dana\GF12897-in]; pre_miRNA [Dana\mir-308-RM]; utr3 [utr3_minus_3068]; miRNA [Dana\miR-308-RA]

No Repeatable elements found

Sense Strand Reads

TCCACTGAAATAAACAAGGTGATATCACTCTACCATCCATGTCTCGTCGCCTCGCAGTATATTTTTGTGTTTTGTTTGGTTTGAAACTCAAATCACAGGATTATACTGTGAGATGCCAAGCGTGTCAGCAGCTGAAACAGTGCATAATTAAAGAATCCTATT

*************************************((((.((...((.(((((((((((.(((((((.((((...((((...)))))))).))))))).))))))))))).))...))))))..************************************ 		Read size # Mismatch Hit Count Total Norm Total V106

head

 V105

male body		 V055

head

 M058

embryo

 M044

female body

 V039

embryo
....................................................CGCAGTATATTTTTGTGTTTTG........................................................................................ 22 0 1 8324.00 8324 4619 2429 925 45 232 74
..........................................................................................AATCACAGGATTATACTGTGA................................................... 21 0 1 1480.00 1480 325 8 56 912 101 78
..........................................................................................AATCACAGGATTATACTGT..................................................... 19 0 1 280.00 280 100 19 68 43 36 14
....................................................CGCAGTATATTTTTGTGTTTT......................................................................................... 21 0 1 134.00 134 69 15 17 18 5 10
....................................................CGCAGTATATTTTTGTGTTTTT........................................................................................ 22 1 1 110.00 110 43 12 32 0 2 21
....................................................CGAAGTATATTTTTGTGTTTTG........................................................................................ 22 1 1 68.00 68 48 10 7 2 0 1
.....................................................GCAGTATATTTTTGTGTTTTG........................................................................................ 21 0 1 59.00 59 25 13 1 0 19 1
....................................................CGCAGTATATTTTTGTGTTT.......................................................................................... 20 0 1 58.00 58 30 15 7 3 3 0
....................................................CTCAGTATATTTTTGTGTTTTG........................................................................................ 22 1 1 53.00 53 28 10 0 14 0 1
....................................................CGCAGTATATTTTTGTGTTTAG........................................................................................ 22 1 1 49.00 49 20 29 0 0 0 0
....................................................AGCAGTATATTTTTGTGTTTTG........................................................................................ 22 1 1 41.00 41 27 1 13 0 0 0
..........................................................................................AATTACAGGATTATACTGTGA................................................... 21 1 1 41.00 41 0 0 0 41 0 0
..........................................................................................AATCACAGGATTATACTGTG.................................................... 20 0 1 38.00 38 21 1 4 0 10 2
....................................................CGCAGTATATTTTTGTGTTTCG........................................................................................ 22 1 1 37.00 37 19 16 2 0 0 0
..........................................................................................AATCACAGGATTATACTGTGAG.................................................. 22 0 1 35.00 35 13 0 5 2 10 5
..........................................................................................AGTCACAGGATTATACTGTGA................................................... 21 1 1 33.00 33 0 0 0 33 0 0
....................................................TGCAGTATATTTTTGTGTTTTG........................................................................................ 22 1 1 28.00 28 13 2 13 0 0 0
....................................................CGCAGTATATTTTTGTGTT........................................................................................... 19 0 1 25.00 25 11 8 5 0 1 0
..........................................................................................AACCACAGGATTATACTGTGA................................................... 21 1 1 23.00 23 1 0 0 22 0 0
....................................................CGCAGTATATTTTTGCGTTTTG........................................................................................ 22 1 1 20.00 20 5 9 4 0 1 1
....................................................CGCAGTATGTTTTTGTGTTTTG........................................................................................ 22 1 1 19.00 19 2 4 2 0 11 0
.........................................................................................CAATCACAGGATTATACTGTGA................................................... 22 1 1 19.00 19 0 0 0 18 1 0
....................................................CGCAGGATATTTTTGTGTTTTG........................................................................................ 22 1 1 18.00 18 1 0 14 3 0 0
....................................................CGCAGTATATTTTTGAGTTTTG........................................................................................ 22 1 1 18.00 18 2 14 2 0 0 0
..........................................................................................AATCACAGGATTATACTG...................................................... 18 0 1 18.00 18 2 0 2 12 2 0
....................................................CGTAGTATATTTTTGTGTTTTG........................................................................................ 22 1 1 17.00 17 9 7 0 0 1 0
....................................................CGCAGTATATTTTTGTGTTTTGT....................................................................................... 23 0 1 16.00 16 3 9 0 2 2 0
....................................................CGCAGCATATTTTTGTGTTTTG........................................................................................ 22 1 1 16.00 16 2 2 12 0 0 0
....................................................CGCATTATATTTTTGTGTTTTG........................................................................................ 22 1 1 15.00 15 8 5 0 0 1 1
....................................................CGCAGTATATTTTTGTGCTTTG........................................................................................ 22 1 1 14.00 14 7 4 2 0 1 0
....................................................CGCGGTATATTTTTGTGTTTTG........................................................................................ 22 1 1 14.00 14 8 3 3 0 0 0
..........................................................................................AATCACAGGATTATACTGC..................................................... 19 1 1 14.00 14 0 0 0 14 0 0
....................................................CGCAGTATATTGTTGTGTTTTG........................................................................................ 22 1 1 13.00 13 0 10 3 0 0 0
....................................................CGCAGTATATTATTGTGTTTTG........................................................................................ 22 1 1 13.00 13 2 10 1 0 0 0
....................................................CGCAGTATCTTTTTGTGTTTTG........................................................................................ 22 1 1 12.00 12 7 3 2 0 0 0
....................................................CGCAGTATATCTTTGTGTTTTG........................................................................................ 22 1 1 12.00 12 7 5 0 0 0 0
..........................................................................................AATCACAGTATTATACTGTGA................................................... 21 1 1 12.00 12 12 0 0 0 0 0
....................................................CGCAGTATATTTTTTTGTTTTG........................................................................................ 22 1 1 12.00 12 6 1 2 0 0 3
....................................................CGGAGTATATTTTTGTGTTTTG........................................................................................ 22 1 1 11.00 11 10 1 0 0 0 0
..........................................................................................AATCACAGGATTATACTGA..................................................... 19 1 1 10.00 10 5 0 0 1 3 1
....................................................CGCAGTATTTTTTTGTGTTTTG........................................................................................ 22 1 1 10.00 10 3 1 3 0 3 0
.........................................................................................AAATCACAGGATTATACTGTGA................................................... 22 0 1 10.00 10 0 0 0 7 3 0
....................................................CGCAGTATATTTTTGTGT............................................................................................ 18 0 1 10.00 10 7 2 1 0 0 0
....................................................CGCAGTATATTTTTGTGTTTTGA....................................................................................... 23 1 1 9.00 9 5 0 1 2 1 0
....................................................CGCAGTATATTTTTGTGTTTGG........................................................................................ 22 1 1 9.00 9 2 7 0 0 0 0
....................................................CGCAGAATATTTTTGTGTTTTG........................................................................................ 22 1 1 9.00 9 1 2 5 0 0 1
....................................................CGCAGTATATTCTTGTGTTTTG........................................................................................ 22 1 1 9.00 9 2 6 1 0 0 0
..........................................................................................GATCACAGGATTATACTGTGA................................................... 21 1 1 9.00 9 5 0 0 2 2 0
....................................................CGCAGTATATATTTGTGTTTTG........................................................................................ 22 1 1 8.00 8 2 6 0 0 0 0
....................................................CGCAGTATATTTCTGTGTTTTG........................................................................................ 22 1 1 8.00 8 0 8 0 0 0 0
....................................................CGCAGTATATTTTCGTGTTTTG........................................................................................ 22 1 1 8.00 8 6 1 1 0 0 0
....................................................CGCAGTATACTTTTGTGTTTTG........................................................................................ 22 1 1 8.00 8 5 1 2 0 0 0
....................................................CGCAGTATATTTTTGTCTTTTG........................................................................................ 22 1 1 8.00 8 2 2 4 0 0 0
....................................................CGCAGTATATTTGTGTGTTTTG........................................................................................ 22 1 1 8.00 8 0 8 0 0 0 0
....................................................CACAGTATATTTTTGTGTTTTG........................................................................................ 22 1 1 7.00 7 4 3 0 0 0 0
......................................................CAGTATATTTTTGTGTTTTG........................................................................................ 20 0 1 7.00 7 5 1 0 0 1 0
....................................................CGCCGTATATTTTTGTGTTTTG........................................................................................ 22 1 1 7.00 7 1 6 0 0 0 0
....................................................CGCAATATATTTTTGTGTTTTG........................................................................................ 22 1 1 7.00 7 3 4 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTCTG........................................................................................ 22 1 1 7.00 7 3 2 2 0 0 0
..........................................................................................AATCACAGGATTATACTGTGAGT................................................. 23 1 1 7.00 7 4 0 1 1 0 1
....................................................CGCAGTATATTTATGTGTTTTG........................................................................................ 22 1 1 7.00 7 0 7 0 0 0 0
........................................................GTATATTTTTGTGTTTTG........................................................................................ 18 0 1 7.00 7 0 4 1 0 2 0
....................................................CGCAGTATATTTTTGTGTCTTG........................................................................................ 22 1 1 7.00 7 5 1 1 0 0 0
....................................................CGCAGTATATTTTAGTGTTTTG........................................................................................ 22 1 1 7.00 7 0 6 1 0 0 0
....................................................CCCAGTATATTTTTGTGTTTTG........................................................................................ 22 1 1 7.00 7 1 2 4 0 0 0
.......................................................................................ATCAATCACAGGATTATACTGTGA................................................... 24 3 1 6.00 6 0 0 0 6 0 0
..........................................................................................AATCACAGGATTCTACTGTGA................................................... 21 1 1 6.00 6 0 1 1 3 0 1
....................................................CGCAGTATATTTTTGTTTTTTG........................................................................................ 22 1 1 6.00 6 2 0 2 0 1 1
....................................................CGCAGTATATTTTTATGTTTTG........................................................................................ 22 1 1 6.00 6 4 1 1 0 0 0
....................................................CGCAGTATATTTTTCTGTTTTG........................................................................................ 22 1 1 5.00 5 1 1 3 0 0 0
..........................................................................................AATCACAGGATTATACTGTGG................................................... 21 1 1 5.00 5 1 0 0 3 0 1
..........................................................................................AATCACAGGATTATACTGTGT................................................... 21 1 1 5.00 5 3 0 2 0 0 0
....................................................CGCAGTATATTTTTGTGGTTTG........................................................................................ 22 1 1 5.00 5 0 1 3 0 0 1
....................................................CGCAGTGTATTTTTGTGTTTTG........................................................................................ 22 1 1 5.00 5 5 0 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTTTA........................................................................................ 22 1 1 5.00 5 2 2 1 0 0 0
....................................................CGCAGTATATTTTTGTGTTTG......................................................................................... 21 1 1 5.00 5 4 1 0 0 0 0
...........................................................................................ATCACAGGATTATACTGT..................................................... 18 0 1 5.00 5 0 0 0 0 5 0
....................................................CGCAGTATATTTTTGTGTTTTGC....................................................................................... 23 1 1 5.00 5 0 0 0 4 0 1
....................................................CGCAGTATATGTTTGTGTTTTG........................................................................................ 22 1 1 5.00 5 1 4 0 0 0 0
....................................................CGCAGTATATTTTTGTATTTTG........................................................................................ 22 1 1 5.00 5 5 0 0 0 0 0
...........................................................................................ATCACAGGATTATACTGTGA................................................... 20 0 1 5.00 5 0 0 0 1 4 0
..........................................................................................AATCTCAGGATTATACTGTGA................................................... 21 1 1 4.00 4 0 0 0 4 0 0
....................................................AGAAGTATATTTTTGTGTTTTG........................................................................................ 22 2 1 4.00 4 3 1 0 0 0 0
...........................................................................................ATCACAGGATTATACTGTGAGT................................................. 22 1 1 4.00 4 1 0 1 2 0 0
.....................................................GCAGTATATTTTTGTGTTTT......................................................................................... 20 0 1 4.00 4 2 0 0 0 2 0
....................................................CGCAGTATATTTTTGTGTTGTG........................................................................................ 22 1 1 4.00 4 1 0 3 0 0 0
..........................................................................................AATCACAGGACTATACTGTGA................................................... 21 1 1 4.00 4 2 0 0 1 0 1
..........................................................................................AATCAGAGGATTATACTGTGA................................................... 21 1 1 4.00 4 0 0 1 3 0 0
.......................................................AGTATATTTTTGTGTTTTG........................................................................................ 19 0 1 4.00 4 1 2 1 0 0 0
..........................................................................................AATCACAGGTTTATACTGTGA................................................... 21 1 1 4.00 4 0 0 2 2 0 0
..........................................................................................AATAACAGGATTATACTGT..................................................... 19 1 1 3.00 3 1 1 1 0 0 0
..........................................................................................AATAACAGGATTATACTGTGA................................................... 21 1 1 3.00 3 2 0 0 0 1 0
..........................................................................................ATTCACAGGATTATACTGTGA................................................... 21 1 1 3.00 3 0 0 0 3 0 0
..........................................................................................AATCACAGGATCATACTGTGA................................................... 21 1 1 3.00 3 0 0 0 3 0 0
..........................................................................................AATCACAGGATTATACGGTGA................................................... 21 1 1 3.00 3 0 0 1 1 0 1
...................................................TCGCAGTATATTTTTGTGTTTTG........................................................................................ 23 0 1 3.00 3 1 0 1 1 0 0
..........................................................................................AATCACAGGATTATACTGGGA................................................... 21 1 1 3.00 3 0 0 0 2 0 1
....................................................CGCAGTATATTTTTGTGTTTTC........................................................................................ 22 1 1 3.00 3 1 0 1 1 0 0
....................................................CGCAGTATATTTTTGTGTTG.......................................................................................... 20 1 1 3.00 3 2 1 0 0 0 0
..........................................................................................AATTACAGGATTATACTGT..................................................... 19 1 1 3.00 3 0 0 0 3 0 0
....................................................CGCAGTCTATTTTTGTGTTTTG........................................................................................ 22 1 1 3.00 3 0 1 1 0 0 1
....................................................CGCAGGATATTTTTGTGGTTTG........................................................................................ 22 2 1 3.00 3 0 0 3 0 0 0
..........................................................................................AAGCACAGGATTATACTGTGA................................................... 21 1 1 3.00 3 3 0 0 0 0 0
...............................ACCATCCATGTCTCGTCGCCT.............................................................................................................. 21 0 1 3.00 3 1 0 0 2 0 0
....................................................CGCAGTATATTTTTGGGTTTTG........................................................................................ 22 1 1 3.00 3 0 0 3 0 0 0
....................................................CGCAGTATATTTTTGTGTGTTG........................................................................................ 22 1 1 3.00 3 0 2 1 0 0 0
....................................................CGCAGTAGATTTTTGTGTTTTG........................................................................................ 22 1 1 3.00 3 0 0 2 0 0 1
..........................................................................................AAGCACAGGATTATACTGT..................................................... 19 1 1 3.00 3 3 0 0 0 0 0
..........................................................................................AATCACAGGATTATACTTTGA................................................... 21 1 1 3.00 3 2 0 0 0 0 1
..........................................................................................AATCACGGGATTATACTGTGA................................................... 21 1 1 2.00 2 0 0 1 1 0 0
....................................................CTCAGTATATTTTTGTGTTTTGT....................................................................................... 23 1 1 2.00 2 0 0 0 2 0 0
..........................................................................................ATTTACAGGATTATACTGTGA................................................... 21 2 1 2.00 2 0 0 0 2 0 0
..........................................................................................TATCACAGGATTATACTGTGA................................................... 21 1 1 2.00 2 0 0 0 2 0 0
..........................................................................................AATCACAGGATTATACTGTTA................................................... 21 1 1 2.00 2 1 0 0 0 1 0
..............................................................................................ACAGGATTATACTGTGAG.................................................. 18 0 1 2.00 2 2 0 0 0 0 0
.......................................................................................TCAAATCACAGGATTATACTGT..................................................... 22 0 1 2.00 2 1 1 0 0 0 0
....................................................AGCAGTATTTTTTTGTGTTTTG........................................................................................ 22 2 1 2.00 2 0 0 2 0 0 0
........................................................................................TGAATCACAGGATTATACTGTGA................................................... 23 2 1 2.00 2 0 0 0 2 0 0
....................................................CGCAGGAGATTTTTGTGTTTTG........................................................................................ 22 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................AATCATAGGATTATACTGTGA................................................... 21 1 1 2.00 2 0 0 0 2 0 0
....................................................CGCTGTATATTTTTGTGTTTTG........................................................................................ 22 1 1 2.00 2 0 0 0 2 0 0
..........................................................................................AATCACAGGATTATATTGT..................................................... 19 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................AATCACAGGATTATACTGTGAT.................................................. 22 1 1 2.00 2 0 1 0 0 0 1
....................................................CGCAGTATATTTTTGTGTTC.......................................................................................... 20 1 1 2.00 2 0 0 0 2 0 0
....................................................CGCTGGATATTTTTGTGTTTTG........................................................................................ 22 2 1 2.00 2 0 0 2 0 0 0
....................................................ACCAGTATATTTTTGTGTTTTG........................................................................................ 22 2 1 2.00 2 0 2 0 0 0 0
....................................................CGCTGTATATTTTTGTGTTTT......................................................................................... 21 1 1 2.00 2 0 0 0 2 0 0
..........................................................................................AATCACAGGATTATACCGTGA................................................... 21 1 1 2.00 2 0 0 2 0 0 0
..........................................................................................AGCCACAGGATTATACTGTGA................................................... 21 2 1 2.00 2 0 0 0 2 0 0
....................................................CGCAGTATATTTTAGTGATTTG........................................................................................ 22 2 1 2.00 2 0 2 0 0 0 0
..........................................................................................GATCACAGGATTATACTGT..................................................... 19 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................AATCACATGATTATACTGTGA................................................... 21 1 1 2.00 2 1 1 0 0 0 0
..........................................................................................AATCACAGGATTATACTGTGAA.................................................. 22 1 1 2.00 2 0 0 0 0 1 1
....................................................CGCAGTATATTTTTGTGATTTG........................................................................................ 22 1 1 2.00 2 0 1 1 0 0 0
..........................................................................................AATCAAAGGATTATACTGTGA................................................... 21 1 1 2.00 2 2 0 0 0 0 0
....................................................TGCAGCATATTTTTGTGTTTTG........................................................................................ 22 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................AATCACAGCATTATACTGTGA................................................... 21 1 1 2.00 2 0 0 0 0 1 1
....................................................AGCAGTATATTTTTGTGCTTTG........................................................................................ 22 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................AATCACAGGATTACACTGTGA................................................... 21 1 1 2.00 2 1 0 0 1 0 0
..........................................................................................AATCACAGGATTATACTGTT.................................................... 20 1 1 2.00 2 1 0 0 0 1 0
..........................................................................................AATCACAGGATTATACTGCGA................................................... 21 1 1 2.00 2 0 0 0 1 0 1
..........................................................................................AATCACAGGATTATATTGAG.................................................... 20 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................AATCACAGTATTATACTGT..................................................... 19 1 1 2.00 2 2 0 0 0 0 0
....................................................TGCATTATATTTTTGTGTTTTG........................................................................................ 22 2 1 2.00 2 2 0 0 0 0 0
....................................................GGCAGTATATTTTTGTGTTTTG........................................................................................ 22 1 1 2.00 2 1 0 0 0 1 0
....................................................CGCAGTATATTTTTGTTTTTG......................................................................................... 21 2 2 1.50 3 3 0 0 0 0 0
....................................................CGCAGTATATTTTTGTTTTG.......................................................................................... 20 2 12 1.50 18 8 9 0 0 1 0
....................................................CTCAGTATATTTTTGTGTTTT......................................................................................... 21 1 2 1.50 3 0 0 0 3 0 0
....................................................CTCATTATATTTTTGTGTTTTG........................................................................................ 22 2 2 1.00 2 1 1 0 0 0 0
..........................................................................................AATCACAGGATTATAATGTGA................................................... 21 1 1 1.00 1 0 0 1 0 0 0
....................................................CGCAGTAACTTTTTTTGTTTTGTT...................................................................................... 24 3 1 1.00 1 0 0 1 0 0 0
....................................................CGGAGTATATTTTTGTGTGTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
.................................CATCCATGTCTCGTCGCCT.............................................................................................................. 19 0 1 1.00 1 0 0 0 0 1 0
....................................................CGCAGTATATTTTTGGGTTTT......................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................AGTCACAGGATTATACTGT..................................................... 19 1 1 1.00 1 0 0 1 0 0 0
....................................................TGCAGTATATTTTTGTGTT........................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
....................................................CGCAGTATATTTTAGTGTTTT......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.......................................................AGTATATTTTTGTGTTTTGTT...................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0
....................................................CGCTGAATATTTTTGTGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
.......................................................................................TCAAATCACAGGATTATACTGG..................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.............................CTACCATCCATGTCTCGTCGCCT.............................................................................................................. 23 0 1 1.00 1 0 0 0 0 1 0
..........................................................................................AATCACAGGATTATACTGGA.................................................... 20 2 1 1.00 1 1 0 0 0 0 0
....................................................CGCAGTATATTTTTGTGTATTG........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................AGATCACAGGATTATACTGTGA................................................... 22 1 1 1.00 1 0 0 0 1 0 0
..........................................................................................TATCACACGATTATACTGT..................................................... 19 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................AATTACAGGATTATACTG...................................................... 18 1 1 1.00 1 0 0 0 1 0 0
..........................................................................................AATCACAGGATAATACTGT..................................................... 19 1 1 1.00 1 0 1 0 0 0 0
....................................................CGCAGTATATTTTTGCTTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
....................................................CGCAGTATATTTGTGTGTTTTT........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
....................................................TGCAGTGTATTTTTGTGTTTTG........................................................................................ 22 2 2 1.00 2 0 0 2 0 0 0
....................................................CGCAGTATATTTTTGTGTTTAT........................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
....................................................CGAAGTATATTTTTGTGGTTTG........................................................................................ 22 2 1 1.00 1 0 0 0 0 0 1
.........................................................................................AAATCACAGGATTATACTGTG.................................................... 21 0 1 1.00 1 0 0 0 0 1 0
..........................................................................................AATCACAGGATTATACTCT..................................................... 19 1 1 1.00 1 0 0 1 0 0 0
....................................................CGCAGTATCTATTTGTGTTTAG........................................................................................ 22 3 1 1.00 1 0 1 0 0 0 0
....................................................CGCAGAATATTTTTGTGTGTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................AATCACAGGAATATACTGT..................................................... 19 1 1 1.00 1 0 1 0 0 0 0
...............................................CGATCCGCAGTATATTTTTGTGTTTTG........................................................................................ 27 3 1 1.00 1 0 1 0 0 0 0
..........................................................................................AATCACAGGATTATACTGTGAAA................................................. 23 1 1 1.00 1 0 0 0 0 0 1
.....................................................GCAGTATATTTTTGTGTTTTC........................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
....................................................CGAGGTATATTTTTGTGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 0 0 0 1
...................................................TCGCAGTATATTTTTGTGTTTT......................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
....................................................CGCAGTATATTTTGGTGTGTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................AATCGCAGGATTGTACTGTGAG.................................................. 22 2 1 1.00 1 0 0 1 0 0 0
....................................................CGCAGCATATTTTTGTGTGTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
....................................................CGCAGTATACTTTTGTGTTT.......................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................AATCACAGGATTATACTGTGC................................................... 21 1 1 1.00 1 1 0 0 0 0 0
....................................................CGCAGTATAGTTTTGCGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
....................................................CGCCGTATATTTTTGCGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
....................................................CGCACGATATTTTTGTATTTTG........................................................................................ 22 3 1 1.00 1 0 0 1 0 0 0
....................................................CGCCGTATATTTTTGTTTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................AATCACAGTGTTATACTGTGA................................................... 21 2 1 1.00 1 1 0 0 0 0 0
....................................................CGAAGTATATTGTTGTGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
....................................................CGCAGTATATTTTTGTGTTGTGT....................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
....................................................CGCAGTAGATCTTTGTGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................AATCACAGGATTATACTCTGAG.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
....................................................CGCGGTATATTTTTGTGTTCTG........................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................AATTACAGGATTATACTGTG.................................................... 20 1 1 1.00 1 0 0 0 1 0 0
....................................................CGCAGGATATTTTTGTGCTTCG........................................................................................ 22 3 1 1.00 1 0 0 1 0 0 0
....................................................CGAAGGATATTTTTGTGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
....................................................CGAAGTATATTTTTGTGTTTTGTT...................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0
....................................................CGCAGTATATTTTTGAGTTTTGT....................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................AATCACAAGATTATACTGTGA................................................... 21 1 1 1.00 1 0 0 0 1 0 0
....................................................CGTAGTATATTTTTGTGTTTTT........................................................................................ 22 2 2 1.00 2 2 0 0 0 0 0
....................................................CGCAGTATATTTTTATGTTTG......................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................AATCACAGGATTATATTGTGA................................................... 21 1 1 1.00 1 0 0 0 1 0 0
....................................................CGCAGTATATTGTTGTATTTTG........................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
..........................................................................................AATCACAGGATTATACTGAGA................................................... 21 1 1 1.00 1 0 0 0 1 0 0
....................................................CGCAGTATATTTTTGACTTTTGC....................................................................................... 23 3 1 1.00 1 0 0 1 0 0 0
....................................................AGCAGTCTATTTTTGTGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TATCACAGGATTATACTGT..................................................... 19 1 1 1.00 1 0 0 1 0 0 0
....................................................CGCACTATATTTTTGTGTTTTG........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................AATCACAGGATGATACTGT..................................................... 19 1 1 1.00 1 0 0 1 0 0 0
....................................................CGGAGTATATTTTTGTGTTTTGT....................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0
..........................................................................................AATCACACGATTCTACTGTGA................................................... 21 2 1 1.00 1 0 0 0 1 0 0
....................................................CGCAGTGTGTTTTTGTGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................AATCACAGGACTATACTGTGT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
....................................................CGCAGTATATTTTGGTGTTTCG........................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................AATCACAGGATTATAATGTG.................................................... 20 1 1 1.00 1 0 0 0 0 1 0
....................................................CGCAGTAGATTTTTGGGGTTTG........................................................................................ 22 3 1 1.00 1 0 0 1 0 0 0
....................................................CGCAGAATATTTTTGTGTTTTT........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
....................................................CGCAGTATAATTTTGTGTTTTG........................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
....................................................CGCAGTATATTTTTGTGTTTTGTTTG.................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1
....................................................CGCAGTATATTTCTGTGTTT.......................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0
........................................................................................TCAATCACAGGATTAAACTGTGA................................................... 23 3 1 1.00 1 0 0 0 1 0 0
....................................................CGCAGTACATTTTTGTGTTTTC........................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
....................................................CGCAGTATATTTTTGTGCTTGG........................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
.........................................................................................AAATCACAGGATTATACTGTGAT.................................................. 23 1 1 1.00 1 0 0 0 1 0 0
....................................................CGCAGTAGATGTTTGTGTTGTG........................................................................................ 22 3 1 1.00 1 0 0 1 0 0 0
....................................................CGCAGTATATGTTTGTCTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................CATCACAGGATTATACTGT..................................................... 19 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................CGATCACAGGATTATACTGTGA................................................... 22 2 1 1.00 1 0 0 0 1 0 0
....................................................CGAAGTATATTTTTGTGTTTTA........................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
....................................................CGCAGTACATTTTTGTGTTTTG........................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
....................................................CGCAGGATATTTTTGTTTTTTG........................................................................................ 22 2 2 1.00 2 0 0 2 0 0 0
.......................................................AGTATATTTTTGTGTTTT......................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0
....................................................CGCAGTATATTTTGGTGTTTTG........................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
.......................................................................................GGAAATCACAGGATTATACTGT..................................................... 22 2 1 1.00 1 0 0 0 0 1 0
....................................................CGCCGTATACTTTTGTGTGTTG........................................................................................ 22 3 1 1.00 1 0 0 1 0 0 0
....................................................CGCCGGATATTTTTGTGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................ATTCACAGGATGATACTGTGC................................................... 21 3 1 1.00 1 0 0 1 0 0 0
.................................................ATCCGCAGTATATTTTTGTGTTTTG........................................................................................ 25 3 1 1.00 1 0 1 0 0 0 0
....................................................CGCAGTATATTTTCGTGTTTT......................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0
....................................................CGCACTATATTTCTGTGTTCTG........................................................................................ 22 3 1 1.00 1 0 0 1 0 0 0
....................................................TGCAGTATGTTTTTGTGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
....................................................CGCAGTTTATTTTTGTGTTTTG........................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0
....................................................CGCAGGCTATTTTTGTGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
....................................................CGCAGTCTCTTTTTGTGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
...........................................................................................ATCACAGGATTATACTGA..................................................... 18 1 1 1.00 1 0 0 0 0 1 0
...............................................................................................CAGGATTATACTGTGAGT................................................. 18 1 1 1.00 1 0 0 0 0 1 0
....................................................CGAAGTGTATTTTTGTGTTTTG........................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
....................................................CGCAGGATATTTTAGTGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
....................................................CGCAGTATGTTTTTGTGGTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................AATCACAGGATTATCCTG...................................................... 18 1 1 1.00 1 0 0 0 1 0 0
....................................................CGAAGTATATTTTTGAGTTGTG........................................................................................ 22 3 1 1.00 1 0 0 1 0 0 0
.....................................................GCAGCATATTTTTGTGTTTTG........................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................CATCACAGGATTATACTGTGA................................................... 21 1 1 1.00 1 0 0 0 1 0 0
..........................................................................................AATCCCAGGATTACACTGT..................................................... 19 2 1 1.00 1 0 0 0 0 0 1
....................................................CGCAAAATATTTTTGTGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................AATCACAGGATTATACTGTCTG.................................................. 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................AATCACAGGATTATACT....................................................... 17 0 1 1.00 1 0 0 1 0 0 0
....................................................CGGAGTATATTTTTGTGTTTT......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
....................................................CGCAGTCTATTTTTGTGTCTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
...................................................CCGTAGTATATTTTTGTGTTTTG........................................................................................ 23 2 1 1.00 1 0 0 0 1 0 0
.........................................................................................CAATCACAGGATTATACTGTGAG.................................................. 23 1 1 1.00 1 0 0 0 1 0 0
....................................................CGCAGTATATTGTTGTGTTTTGA....................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
..........................................................................................AATCACAGGATTATACTGTCA................................................... 21 1 1 1.00 1 0 0 0 0 0 1
..........................................................................................ATTCACAGGATTATACTGT..................................................... 19 1 1 1.00 1 0 0 0 1 0 0
....................................................CGCAGTATATTTTTGTGTTTTGTT...................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
..........................................................................................AGTCACAGGATTCTACTGTGA................................................... 21 2 1 1.00 1 0 0 0 1 0 0
...................................................CCGCAGTATATTTTTGTGTTTTG........................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
................................................................................TTGAAACTCAAATCACAGGATT............................................................ 22 0 1 1.00 1 0 0 0 1 0 0
..........................................................................................AAACACAGGATTATACTCTGT................................................... 21 3 1 1.00 1 0 0 1 0 0 0
................................................................................TTGAAACTCAAATCACAGGATTATACT....................................................... 27 0 1 1.00 1 0 0 0 1 0 0
....................................................CGTAGGATATTTTTGTGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................AATCACAGGATTAAACTGTGA................................................... 21 1 1 1.00 1 0 0 0 1 0 0
....................................................CGCAGTCTATTTTTGTGTT........................................................................................... 19 1 1 1.00 1 0 0 0 0 0 1
..........................................................................................AACCACAGGATTATACTGTGAGC................................................. 23 2 1 1.00 1 0 0 0 1 0 0
..........................................................................................ATTCACAGGATTATACTG...................................................... 18 1 1 1.00 1 0 0 0 1 0 0
....................................................CGCAGTATATTTTTGTGTTTCGTT...................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
....................................................CGCAGGATGTTTTTGTGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
....................................................CGCAGTATACTTTTGTGTTTT......................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
....................................................CGCAGCATATCTTTGTGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
....................................................CACAGTATATTTTTGTGTTTT......................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
..........................................................................................AATCACGGGTTTATACTGTGA................................................... 21 2 1 1.00 1 0 0 1 0 0 0
....................................................CGCAGTATATTTTCGTGCTTTG........................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
..........................................................................................AATCTCAGGATTATACTG...................................................... 18 1 1 1.00 1 0 0 0 1 0 0
.....................................................CCAGTATATTTTTGTGTTTTG........................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
....................................................CGCAGTCTATTTTTGTGTTTTT........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
....................................................CGCACTATATTTTTTTGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
....................................................CGCAGTATATCTTTGAGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
....................................................GGCAGTATATTTTTGTGTTTTGA....................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
....................................................CGGCGTATATTTTTGTGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
.........................................................................................AGATCACCGGATTATACTGTGA................................................... 22 2 1 1.00 1 0 0 0 1 0 0
..........................................................................................AATCACAGGCTTATACTGT..................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................ACTCACAGGATTATACTGTGA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.....................................................CCAGTATATTTTTGTGTCTTG........................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0
....................................................CCCAGTATATTTTCGTGTTTTG........................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
.....................................................................................ACGATAATCACAGGATTATACTGTGA................................................... 26 3 1 1.00 1 0 0 0 1 0 0
....................................................CGGAGTATATTTTTGTGTTT.......................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
....................................................CGCAGTATATATTTGTGTTTCG........................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0

Anti-sense strand reads

AGGTGACTTTATTTGTTCCACTATAGTGAGATGGTAGGTACAGAGCAGCGGAGCGTCATATAAAAACACAAAACAAACCAAACTTTGAGTTTAGTGTCCTAATATGACACTCTACGGTTCGCACAGTCGTCGACTTTGTCACGTATTAATTTCTTAGGATAA

************************************((((.((...((.(((((((((((.(((((((.((((...((((...)))))))).))))))).))))))))))).))...))))))..************************************* 		Read size # Mismatch Hit Count Total Norm Total V055

head

 V039

embryo

 V105

male body		 M058

embryo

 M044

female body
..............................................................................................................................TTGTCGACTTTGTCAGGTGTTA.............. 22 3 1 1.00 1 1 0 0 0 0
....................CTATAGTGAGATTGTATG............................................................................................................................ 18 2 4 0.25 1 0 1 0 0 0
................................................................ACCACAAAACAAACCAAACATTAA.......................................................................... 24 3 6 0.17 1 0 0 0 1 0
...............................TGGGAGGTACAGAGAAGTG................................................................................................................ 19 3 20 0.15 3 0 0 2 0 1
.....................TATAGAGAGATGGAAGGTA.......................................................................................................................... 19 2 11 0.09 1 0 0 1 0 0
...............................TGGGAGGTACAGAGAAG.................................................................................................................. 17 2 14 0.07 1 1 0 0 0 0
.................................................................ACCCAAAAGAAACCAAGCTT............................................................................. 20 3 20 0.05 1 1 0 0 0 0
..........................TAAGATGGGAGATACAGAG..................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_13266:5819919-5820080 + dan-mir-308 Known_mirbase TC---CAC-------------------------TGAAATAAACAAGGTGATATCACTCTACC--------------------------------------------------------------------------ATCCATGTCTCGTCGCCTCGCAGTATATTTTTGTGTTTTGTTTG-GTTTGAAACTCAAATCACAGGATTATACTGTGAGATGCCAAGCGTGT---CAGCAGCTGAAACAG------------TGCATAATTAAAGAATCCTA---TT
droBip1 scf7180000396372:434894-435052 + TC---TAC-------------------------TGAACTAAACAAGGTGATATCACTCCTAC--------------------------------------------------------------------------ATCCATGTCTCGTCGCCTCGCAGTATATTTTTGTGTTTTGTTTG-TTTTGAAACTCAAATCACAGGATTATACTGTGAGATGCCAAGCGTGT---CAGCAGCCGAATATCAGCAATTCA-AT------------ATC--TAA---TA
droKik1 scf7180000302385:233906-234076 - CT---CCGTC------------C-CGTC--CCC-----CCCGCAAAGTGCTTCCTCTCCG-------------------------------------------------A-----------AG------------AACCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTGTGTTTGAAAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGTGC---CAGCAACAGCAGCAGCATAATTAG--------CCTTTAATTA---TA---GT
droFic1 scf7180000453948:328406-328573 + AG---TCC-------------------------C-------AAGAAGTGTTA---------------------------TC----------------C---ACATCCCGA---------AGAG------------AACCCACGTCTCGACGACTCGCAGTATATTTTTGTGTTTTGTTGG-TTTTGGAACTCAAATCACAGGATTATACTGTGAGCTGACAAGCGTGC---CAGCAACCAAAGAAATCTAAAACGG--TTTGGAATTAAAT----TCG---TG
droEle1 scf7180000491349:772076-772224 + TC---CG----------------------------------CAAAAGTGTTT---------------------------GC---------------------CATCCCGG---------AGAG------------ATCCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTG-TTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGTGC---CAGCAGCCAAGAGTGAATGGAACT---------------------GG---TT
droRho1 scf7180000777200:420715-420876 - AG---TTA--T-----------------TCTTT-------ATAGAAGTGTGT---------------------------TC---------------------CGTTCTGG---------AGAG------------ATCCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTCG-TTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGTGC---CAGCAGCGAAGAGTTTATGAAATT-------------GGTTC---TA---GT
droBia1 scf7180000301506:3161405-3161567 + AACTGGCC-------------------------T-------CAGAGTTGTGT-----------------------------------------TATGCCCCCCATCCAGAGA-------AGAG------------AACCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTAGG-CTTTGAAACTCAAATCACAGGATTATACTGTGAGATGCCAAGCGTGC---CAGCAGCAGAAAGGGATTGAAGCG---------------------TA---TT
droTak1 scf7180000414111:5706-5857 - GC---CTA----------------------ACT-------GCAGAAGTGCTTC-----CG--------------------------------------AAG----------TCA------TCG------------ATCCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTGG-TTCTGAAACTCAAATCACAGGATTATACTGTGAGCTGACCAGCGTGC---CAGCAGCAAGAAGTTTATAGGATG---------------------GA---TT
droEug1 scf7180000409462:2740167-2740335 + TC---GTC-------------------------TA------TAGCAGTGTTTTTTCTCC-------------------------------------------AACCCAGA---------AGTG------------ATCCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTA-TTTTGTAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGTGC---CAGCAGCGAATAATGAATAAAAAG---------TGTAAATTATTCTC---TC
dm3 chr2R:10103266-10103448 - dme-mir-308 Known_mirbase CA---CGGTGGT----------------------------------------TGACCCCACCATTGAAGTGCTA-----T----------------GCCCGCCATCCGGA---------TGAGATGGCGGGGTTAATAACACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGTTTTGCAATCCAAATCACAGGATTATACTGTGAGATGACCAGCGTGC---CAGCAGCGAAAAGCGACTGATATG---------------------AT---AT
droSim2 2r:10806871-10807039 - dsi-mir-308 Known_mirbase GA---CCC-------------------------TAACA---TAGAAGTGGTG---------------------------G----------------------GATGG--------------------TGGGGGGAATCACACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGTTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACCAGCGTGC---CAGCAGCAGAAAGCGAATGATATG--------ATATCAATAATATTA---TC
droSec2 scaffold_1:7611662-7611830 - dse-mir-308 Known_mirbase CA---GAT-AGT---------------------------AGACA---------GACCCTAACATAGAAGTGGTG-----G-----GG---------------GATGG--------------------TGGGGGGAA--TCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGTTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACCAGCGTGC---CAGCAGCAAAAAGCGAATGATATT--------------------ATA----T
droYak3 2R:10041101-10041295 - dya-mir-308 Known_mirbase AA---ATT-AATTAACCCCGCCCTCTTTTCACT-------ATGGAAGTGCTT---------------------------T----------------GCCCGCCATCCGGA---------TGAGA---TGGGGGGAATCACACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCCTTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACCAGCGTGC---CAGCAGCAGAAAGTGACTGACAAG-AT------------CTG---TA---TT
droEre2 scaffold_4845:15739185-15739361 + der-mir-308 Known_mirbase TC---CTC----------------------CCC-------ACCAAAGTGCTT---------------------------T----------------GCCCGCCGTCCGGA---------TGATA---TGGGGGGAATCACACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGTTTTGCAAATCAAATCACAGGATTATACTGTGAGATGACCAGCGTGCCGCCAGCAGCAGAAAGTGACTGACCAG-AT------------TTG---TA---TT
dp5 3:16336957-16337127 - dps-mir-308 Known_mirbase TC---TCA-------------------------GAACATCTCCAAAGTGTTT---------------------------TC----------------CTAGGTGTGCCG----------AAAG------------AAGCGGCGTCTTGACGCCTCGCAGTATATTTTTGTGTTTTGTTGT-GTCTGAAACGCAAATCACAGGATTATACTGTGAGATGCTGGGCGTGC---TATCAAGAGAGTGTGAACGG------------AACCCAAGTG---TATTTTG
droPer2 scaffold_4:426210-426376 + dpe-mir-308 Known_mirbase TC---TCA-------------------------GAACATCTCCAATGTGTTT---------------------------TC----------------CTAGGTGTGCCG----------AAAG------------AATCGGCGTCTTGACGCCTCGCAGTATATTTTTGTGTTTTGTTGT-GTCTGAAACGCAAATCACAGGATTATACTGTGAGATGCTGGGCGTGC---TATCAGAGA-GTGTGAAAGG------------AACCCAAGTG---TA---TT
droWil2 scf2_1100000004513:1860884-1861055 + dwi-mir-308 Known_mirbase CC---AAC--------------------------------ACCAACATGCTG---------------------------G-----ATACTGATTAAGGCTC----------TCGTCGACCACA------------G--ACTATTCTTG-CGTCTCGCAGTATATTTTTGTGTTTTGTTCAATTTGTCAACTCAAATCACAGGATTATACTGTGAGCTGCGAAATGGAA----ATCCACGCAACCAT------------TTTAAAATCAAATTGACTTA---AA
droVir3 scaffold_12875:17605256-17605420 + dvi-mir-308 Known_mirbase TT---GCT-------------------------TTATTTATTTATTGTTATTTTAATTTG-------------------------------------------------T---------AGCC------------AA--CGCA-TTCGATGTCTCGCAGTATACTTTTGTGTTTTGTTTA-TTTTGAAAATCAAATCACAGGATTATACTGTGAGTTATCGGCTGTAG---CAACAACAAAAATCCATTT----------TAGACACAAAGCTTTATA---TG
droMoj3 scaffold_6496:11229020-11229172 + dmo-mir-308 Known_mirbase TA---TTC-------------------------TAAATTTGTTAAG---ATTTTAATTTG------------------------------------------------AATTAT------TTG------------AA--CACA-TTCGATGTCTCGCAGTATATTTTTGTGTTTTGTTTA-TTATAAAAATCAAATCACAGGATTATACTGTGAGTTATCGGCTGAAA---CAACAACAAAT--TGAATTAAAAT---------------------CA---TC
droGri2 scaffold_15245:14076216-14076400 - dgr-mir-308 Known_mirbase AC---ATCTA-TCAGCTATACA---------TT--AT---TTAGAAGTGTTTTCAATTTGATATACA-------TATATAGATAGAT-CTG-TTAAGCCCAC-------------------------------------CA-CTGTCGATGTCTCGCAGTATATTTTTGTGTTTTGTTTATTTTTGAAAATCAAATCACAGGATTATACTGTGAGTTATC------GC---CAGCAGCAAGGAC-----AACCAA-AT------------TTT---AA---TT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TC---CAC-------------------------TGAAATAAACAAGGTGATATCACTCTACC--------------------------------------------------------------------------ATCCATGTCTCGTCGCCTCGCAGTATATTTTTGTGTTTTGTTTG-GTTTGAAACTCAAATCACAGGATTATACTGTGAGATGCCAAGCGTGT---CAGCAGCTGAAACAG------------TGCATAATTAAAGAATCCTA---TTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTG...........................................................................................................2218324.008324232457492524294619
.................................................................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................2111480.00148010191278568325
.................................................................................................................................................................................................AATCACAGGATTATACTGT.......................................................................191280.002803643146819100
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTT............................................................................................................211134.0013451810171569
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTT...........................................................................................................221110.001102021321243
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTG...........................................................................................................21159.0059190111325
..........................................................................................................................................................CGCAGTATATTTTTGTGTTT.............................................................................................................20158.005833071530
.................................................................................................................................................................................................AATCACAGGATTATACTGTG......................................................................20138.003810024121
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................22135.003510255013
..........................................................................................................................................................CGCAGTATATTTTTGTGTT..............................................................................................................19125.00251005811
.................................................................................................................................................................................................AATCACAGGATTATACTG........................................................................18118.00182120202
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGT..........................................................................................................23116.0016220093
.................................................................................................................................................................................................AATCACAGGATTATACTGC.......................................................................19114.00140140000
.................................................................................................................................................................................................AATCACAGGATTATACTGA.......................................................................19110.0010311005
................................................................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................22110.0010370000
..........................................................................................................................................................CGCAGTATATTTTTGTGT...............................................................................................................18110.0010000127
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGA..........................................................................................................2319.009120105
............................................................................................................................................................CAGTATATTTTTGTGTTTTG...........................................................................................................2017.007100015
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................2317.007011104
..............................................................................................................................................................GTATATTTTTGTGTTTTG...........................................................................................................1817.007200140
.................................................................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................2115.005031001
.................................................................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................2115.005000203
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTA...........................................................................................................2215.005000122
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTG............................................................................................................2115.005000014
..................................................................................................................................................................................................ATCACAGGATTATACTGT.......................................................................1815.005500000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGC..........................................................................................................2315.005041000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................2015.005410000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................2214.004020101
...........................................................................................................................................................GCAGTATATTTTTGTGTTTT............................................................................................................2014.004200002
.............................................................................................................................................................AGTATATTTTTGTGTTTTG...........................................................................................................1914.004000121
.........................................................................................................................................................TCGCAGTATATTTTTGTGTTTTG...........................................................................................................2313.003010101
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTC...........................................................................................................2213.003010101
..........................................................................................................................................................CGCAGTATATTTTTGTGTTG.............................................................................................................2013.003000012
...........................................................ACC--------------------------------------------------------------------------ATCCATGTCTCGTCGCCT.................................................................................................................................2113.003020001
.....................................................................................................................................................................................................ACAGGATTATACTGTGAG....................................................................1812.002000002
..............................................................................................................................................................................................TCAAATCACAGGATTATACTGT.......................................................................2212.002000011
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................2212.002001010
..........................................................................................................................................................CGCAGTATATTTTTGTGTTC.............................................................................................................2012.002020000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................2212.002101000
.................................................................................................................................................................................................AATCACAGGATTATACTGTT......................................................................2012.002100001
.............................................................C--------------------------------------------------------------------------ATCCATGTCTCGTCGCCT.................................................................................................................................1911.001100000
.............................................................................................................................................................AGTATATTTTTGTGTTTTGTT.........................................................................................................2111.001100000
..............................................................................................................................................................................................TCAAATCACAGGATTATACTGG.......................................................................2211.001000100
.........................................................CTACC--------------------------------------------------------------------------ATCCATGTCTCGTCGCCT.................................................................................................................................2311.001100000
.................................................................................................................................................................................................AATCACAGGATTATACTGGA......................................................................2011.001000001
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTAT...........................................................................................................2211.001000001
................................................................................................................................................................................................AAATCACAGGATTATACTGTG......................................................................2111.001100000
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTC...........................................................................................................2111.001000001
.........................................................................................................................................................TCGCAGTATATTTTTGTGTTTT............................................................................................................2211.001000001
.................................................................................................................................................................................................AATCACAGGATTATACTGTGC.....................................................................2111.001000001
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGTTTG-......................................................................................................2611.001001000
................................................................................................................................................................................................AAATCACAGGATTATACTGTGAT....................................................................2311.001010000
.............................................................................................................................................................AGTATATTTTTGTGTTTT............................................................................................................1811.001010000
..................................................................................................................................................................................................ATCACAGGATTATACTGA.......................................................................1811.001100000
......................................................................................................................................................................................................CAGGATTATACTGTGAGT...................................................................1811.001100000
.................................................................................................................................................................................................AATCACAGGATTATACT.........................................................................1711.001000100
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGTT.........................................................................................................2411.001000010
.......................................................................................................................................................................................TTGAAACTCAAATCACAGGATT..............................................................................2211.001010000
.......................................................................................................................................................................................TTGAAACTCAAATCACAGGATTATACT.........................................................................2711.001010000
droBip1
TC---TAC-------------------------TGAACTAAACAAGGTGATATCACTCCTAC--------------------------------------------------------------------------ATCCATGTCTCGTCGCCTCGCAGTATATTTTTGTGTTTTGTTTG-TTTTGAAACTCAAATCACAGGATTATACTGTGAGATGCCAAGCGTGT---CAGCAGCCGAATATCAGCAATTCA-AT------------ATC--TAA---TASizeHit CountTotal NormTotal
No Reads
droKik1
CT---CCGTC------------C-CGTC--CCC-----CCCGCAAAGTGCTTCCTCTCCG-------------------------------------------------A-----------AG------------AACCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTGTGTTTGAAAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGTGC---CAGCAACAGCAGCAGCATAATTAG--------CCTTTAATTA---TA---GTSizeHit CountTotal NormTotal
No Reads
droFic1
AG---TCC-------------------------C-------AAGAAGTGTTA---------------------------TC----------------C---ACATCCCGA---------AGAG------------AACCCACGTCTCGACGACTCGCAGTATATTTTTGTGTTTTGTTGG-TTTTGGAACTCAAATCACAGGATTATACTGTGAGCTGACAAGCGTGC---CAGCAACCAAAGAAATCTAAAACGG--TTTGGAATTAAAT----TCG---TGSizeHit CountTotal NormTotal
No Reads
droEle1
TC---CG----------------------------------CAAAAGTGTTT---------------------------GC---------------------CATCCCGG---------AGAG------------ATCCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTG-TTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGTGC---CAGCAGCCAAGAGTGAATGGAACT---------------------GG---TTSizeHit CountTotal NormTotal
No Reads
droRho1
AG---TTA--T-----------------TCTTT-------ATAGAAGTGTGT---------------------------TC---------------------CGTTCTGG---------AGAG------------ATCCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTCG-TTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGTGC---CAGCAGCGAAGAGTTTATGAAATT-------------GGTTC---TA---GTSizeHit CountTotal NormTotal
No Reads
droBia1
AACTGGCC-------------------------T-------CAGAGTTGTGT-----------------------------------------TATGCCCCCCATCCAGAGA-------AGAG------------AACCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTAGG-CTTTGAAACTCAAATCACAGGATTATACTGTGAGATGCCAAGCGTGC---CAGCAGCAGAAAGGGATTGAAGCG---------------------TA---TTSizeHit CountTotal NormTotal
No Reads
droTak1
GC---CTA----------------------ACT-------GCAGAAGTGCTTC-----CG--------------------------------------AAG----------TCA------TCG------------ATCCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTGG-TTCTGAAACTCAAATCACAGGATTATACTGTGAGCTGACCAGCGTGC---CAGCAGCAAGAAGTTTATAGGATG---------------------GA---TTSizeHit CountTotal NormTotal
No Reads
droEug1
TC---GTC-------------------------TA------TAGCAGTGTTTTTTCTCC-------------------------------------------AACCCAGA---------AGTG------------ATCCCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTA-TTTTGTAACTCAAATCACAGGATTATACTGTGAGATGACAAGCGTGC---CAGCAGCGAATAATGAATAAAAAG---------TGTAAATTATTCTC---TCSizeHit CountTotal NormTotal
No Reads
dm3
CA---CGGTGGT----------------------------------------TGACCCCACCATTGAAGTGCTA-----T----------------GCCCGCCATCCGGA---------TGAGATGGCGGGGTTAATAACACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGTTTTGCAATCCAAATCACAGGATTATACTGTGAGATGACCAGCGTGC---CAGCAGCGAAAAGCGACTGATATG---------------------AT---ATSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTG...........................................................................................................221669373.00669373000012868526431751211200177200178217691823313093013583918555574124268047422764145282676299781742980910581185280035694116148273415001925424000000000000000001892191692051128035142104215334528572720092134912422520917786193271325064736985171742715561822410120121081140204115131452365450531015316216931251881168887641622589239922351892269334424402399600000419418337155550105188406153403145648988397310333812104609213568189786631756621263901388261382211130879327223205000004741575813461110442834452141165138828276482475995414462458813313635742552957000052426415321527314837922295188575615334241887148126023634315251747272240048661487325132212941264139330723195119532724237430011292149971162771189182710544129171723187107464563459511246983074731140817790199898623032322261348523511867161237631068425824749814518542604996501440572211519843164232027062136839213187334766374176158701852132132832724326565911076699101203726547864
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................221454236.004542360000541562914013519108500000014220100230211261410122141418102573736113357192169373770000000000000000000000092945103274691701101371092706250713968762532511581817110625179224248204376916812241862354128318710679587156499679503172632913670500001100301001011771172590494733112231273558542717323350000117916816813921041357607610200175114041431236120622320065307000001046300000244700000000079297371210361276561019196684401431000011521024141385157529353421108122142046191814114118526119362391910467233243407235401331237415001099771723532301101101121012228131027355
.................................................................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................211245631.00245631000062101915118816947200000303213041704468331303976910557741205284581391515446129301038122011913052000000000000000000000002616128543194632874717940612010929938253858444221351622614368218421011257649620784827051847396839263857884125106621443309111817120235240274815426902825525300658353268272415460640533743539166475335000001882202564750625182185802034101456990494598353954687881049217808324213025825335201006121363000006613600210010171428027222711862547519237545680002678000053326132242681122684815018311814358798983614766537513655212486354148478243272196147163113114577720814476852685346299405497994992252352624333213769252326531881581834449210460633422051857066610109111424691591172201911
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTT...........................................................................................................22120240.002024000000001000000000000164510091572450000000033414935369358914024622934316225136201092622341390000000000000000000000043251262250510295010460201300221281213106400000412510000000401150010000000494265201118187753660503454401362441121001008161021111025230131440580016021173802014364417911217200000933300220003530101001201000101100000672270764183299215186771547712919712621203794209495718463319512012713922202155623116199776333300081656021870321216419011311538130919122572300801120100112520300253551
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTT............................................................................................................21118844.0018844000000000011100000006420318334611620412334335293334198130291139234682140219552700092000000000000000000334125570800117181221722215811106351101716235951813170210102000011100000000004389612527510836137286416018423131100000295732604556410421407244421913196117518119239152211958514100019051400000135800200015799856711914412104677751905814400001791882501562361203014552650501634441167568285231959552175316712557610849110438227790518263130591158702622861221331652071035171413239313693245517634109812103656571116662866932717312113910256127144328324121315414140637
.................................................................................................................................................................................................AATCACAGGATTATACTGT.......................................................................1919015.009015000000000000000000009192002840259445098110811565191456131113131416512000000000000000000000001249223305153560011002523421431531522282200403201100000000715610346470039742627372894243739292940751510000004608114961540224014661352314015130710150722250200040550000092600000055342837617120016140009222580000133371952429616910542211281242816373732361623927128411286266392111873086480957535745385322592317989719814765216208816178152644392015829033657615311213191215211132121483524244379113325739
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................2317230.007230000010000000010000003500001000000011500401218415182181655000000000000000000000008479486089800294529961101152120011160555215589161810307180500000000010000000031101561200111210760004400000111500591280130018615070140054005029000000005000001511000000000141001212463481812363296001420000101111068532744021012110201049131101096308403349523914275135100040721130100018380012200003300310111286813980
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTG...........................................................................................................2116341.006341000000000000000000002210066214300000061315412733271972027658464125170000000000000000000000022230000021000000000000010000000001000002000000000060000000000022539351216383032232030225257000004091100177010411711144031777370500423103416309012000000300200050442511381064215123232713210000341361928131683298820526165321341125213019219206730171881493181592136827642831845938811001883331627133929722162223277254431111023191174282180729151011919426544731200
.....................................................................................................................................................................................................ACAGGATTATACTGTGAG....................................................................1815223.00522300000000000000000000518000000000000002020300011309430530000000000000000000000015061468124254900000000100000000410020003110000001000000000000000000000000003350013444100000000000004020010021120401000020029050000010000000047000000000150210075000100000000030000000000000000000000000041004201046001802013000000000000000000000070010000000000000000000010013
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGA...................................................................2214862.004862000000000000020000000120000020000000100000000202010110000010000000000000000059861244854801000222100100000000280653314434001030280101020201020140000202041003002834321040000006686004132032006143356339112130010002370000000000000000110000000000000401011176001974450247500000020010000000003000100000013270010061216010240200014000111112120010714801000000000000000000000012
..........................................................................................................................................................CGCAGTATATTTTTGTGTTT.............................................................................................................2014573.0045730000000000000000000031601778101000001613620421812553913115400030126000000000000000001710816000001760010033650003100168225000000000000000010100000000000151520802128961316231938000005011400102190723140133503624125161433031932300402300000060010003244289251220233000105510000217111669371691243112292116113241131533261641247924171283531805733105037753620010749296163118332612143863732164902876885535106478124324311115717112719213213842611435
.................................................................................................................................................................................................AATCACAGGATTATACTGTG......................................................................2013559.0035590000110000000000010000000010086157215226631201035103111610000000000000000000000000731016265202012210010003230002319111724230120020230110100082380000000000104300410524211002000002221412918131125042101352497175811701722019004860000000000900000200000000002010002100035000310000411004134113413695220003023411326723111756735512134262862304911184000114131003308340425000011000006011002117116179
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGA...................................................................2312958.002958000000012000010000000000002020000000000000000100000000000000000000000000000032737023734611213861000000001100011013987419761000350291000201031360000231090100000410001020000005700110141111040002366237239010750280082000000000060000000000000000000051233840012914600920000000000000000000000000000000000110023000112000000000000000010000000100000000000000000000100000245
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................2212917.0029170000303661010400000001000000000000000101020000001200000000000000000000000000545567363639848108134711132215103451033440213988489202171324030000000000100000000010041000020100000000005010002617090019605025033100000410100000000100000010000000001000002301082003100000100200011000000000000000010000001412030100203000001000100000000011100000000000000000000000023
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................2212858.00285800000000000001000000517000300000000663192311307205744400000000000000000000000336367225380000050200001001100001100261642520210101100000000001013000001005015400217216751210000000001838112050012170170306100000471200000000000000450000001006210003655300258600760000011221464120200020112145000372627754351037462835241101021200001011193201116352236300020000020001020114601099
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................2112468.0024680000002030010200000000000010000000000001000001010001000000100000000000000000208220148234118251612101100010101400320100155702848641801608240000000000000000000000000000001000000000000000002120000023010000000000400000000000000000100000000000000164000880050000000001000000000000000000000001000000010105120000000000000010000000810000000000000000000000100801
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGT..........................................................................................................2312223.00222300000000000000000000013101410000000010001411031113712320004210000000000000000013230400010100210010010006030700000001000001000000050000000000005401131271235993170000010020062606101061430135241107022311020003000000001100000020843101021153211315551800000524415119403443483117163512780412445132514216447493175532263710538281441246313227185311347273516524343119111411314411250763523571291337131013460
................................................................................................................................................................................................AAATCACAGGATTATACTGTGAG....................................................................2311694.0016940000100100010000000000000000000000000000002000001020000000000000000000000000321392231369010031131001100210000910171537402310100700000000000000000000000020000120100002000000000000310200580103020000001600000000010000000000000000000001038000820010000000000000000000200000000000001000010000212111010000100010020000000001000000000000000000000000125
..........................................................................................................................................................CGCAGTATATTTTTGTGTT..............................................................................................................1911439.0014390000000000000000000012200241100000002001002320122652100002100000000000000000088111100000001300000011000000331300000000000000000000100022000000105021350042352000002003304790222027002400013011901111100300000000010000005678103410420001213000005342618462011669315130081086811926111369573700210473663941161217354311964302620252143157218396133600170132411711131328351318470
.................................................................................................................................................................................................AATCACAGGATTATACTGTGATG...................................................................2311275.00127500000000000000000000000000000000000000000000000000000000000000000000000000003383532293540000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTC...........................................................................................................2211141.001141000000000000000000000000010000000000000109000000013220000000000000000000000001000000000000010000000000000000000000000000000000000000000000112903467866731215000001082004103350010017020100000000200001000000010000000001012000000010000000000211223105110021430117320032429352161715210370176112384745300025274723400604012110000112110022001213086120
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAC....................................................................2211049.00104900000001000000000000000000100000000000000000000000000000000000000000000000002302661803080110110000020000000000122641000000100000000001000000000000001000010000000000000000000100300110000010000002000000000000000001000000000000000300001100000000010010001000000110000000010011000030000000010000010000000100000002000000000000000000000000006
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGA..........................................................................................................2311022.00102200000000000001000000000000000000000002011412020105322000000000000000000000002211030001110000000000000000010100000000000000000202000010001000446150222015266000002000004601320030121350000101010000000000000037000000170011061811532260301010000003652101205272100503103110920213533336945826111811191396121672009321365944001151438851153410019115104013321114583415
..........................................................................................................................................................CGCAGTATATTTTTGTGT...............................................................................................................181901.0090100000000000000110000010000002002000011030102010120001000201000000000000000001813111400000110001000000000100012001000001000000000003000014000001122003531350000000004209000120010020022310060136006422002000000000000000019211727850010000000000000125011000000020230027362770341435186100101242391116281149192412613241278221551163541211040060101342431024142234
..............................................................................................................................................................GTATATTTTTGTGTTTTG...........................................................................................................181893.0089300000000000000000000030005010140300001003210010122003000000000000000000000000000000000000000000000000000000000000000000000000001000000000000281040118613109300100000000500110241051500020400013071810150030200000003002000481823241315000110014000000000500010000012002001100001057171823321010717510441654593015324512051022011063303002400100010110122250
.................................................................................................................................................................................................AATCACAGGATTATACTG........................................................................181888.008880000000000000000010038000000155112224000311000102012001200000000000000000000000352515035323001000100010191713231523002018040000000001000117220000102444001104434000000010000000718061002261118142490402051000000000000000030000002001303200100000107110000201422010022031156151230013136151910133125231262973301462114712811200226002000073000000000000000000000012134
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................221775.00775000000010000020000000010001000000000120100000100020000000000000000000000000084105671950323523050102000100000110141820111100000700000000002001001100000010000113030000200000234213321010030020102002000000000000001000002100000000000000002000040020000006000000010000001000100000011000000111100020000000100010130100005512000000000000001000000000023
................................................................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................221639.006390000100000001000000000000000000000010010024100110503100000000000000000000000414670000011100020010100000181171625000026030000000010100000000000100300130313210210000067030015160130033160120170150000009401000000000000001400000000030000181000010700032000000200020110001000100010000153201121204270302407010001001031110000071000000000000000000100010015
.................................................................................................................................................................................................AATCACAGGATTATACTGTGC.....................................................................211598.005980000000000000000000000000000000000000000085000006410000000000000000000000000212412311010311000000060100011159301000000101010000000035416350000000000200010110001002000000010100663601800200301801100100031000000000000000000000000000000000000000100100000000060311100011010001000010010000220303020020100002000002100010018000000000000000000000000004
............................................................................................................................................................CAGTATATTTTTGTGTTTTG...........................................................................................................201559.00559000000000000000000000000021340000000120000000002112210000000000000000000000000000000000000000000000000000000000100500000000000000000000000001301050111100300000404104000112303210523001440010031120000000000003000000124512000001000110000000000000000000010110020111100222021031200040511502125139400111200301002552102410003000301112100232350
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTA...........................................................................................................221519.0051900000000100020000000001001000000000101020221101103413000000000000000000000002001020000100001000010100004100000001000000000000000000000000000061106511121310000000000022028240671012100010000100300100000000020000003011421001000040000000011111131202121032003212751012805310500130013107867111000121162121101403144142022140021063120025210100
.................................................................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................211494.0049400000000000012000000000000100000000200000011001060100000000000000000000000001921947110012010100600200000115358390000000208010000001407500000000001210000003000000000000002081470230011002030600110052000000000000000000000000000000000000000200000000000030101301020000000000002030200101220000200200000000010000000012000100000000000000010002111
.................................................................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................211440.00440000011010002010000000000000000000000000010100000200000000000000000000000000013791521000112000100110000151525130300000105000000003023000000000001000001000000000000000000653301400760702804000010074000000000000000010000000000100000000000900600000000040300000001010000100001010100121101000210100003000200001000001000000100000000000000000101
.............................................................................................................................................................AGTATATTTTTGTGTTTTG...........................................................................................................191410.004100000000000000000000001000701200000000000010000011120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111700413200200000001001002101510070200000200101600300000000000000000007104001010530001000000000000000000001100000030110004171120360103081272022102210000141002001901112601001200000100010042000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................201394.0039400002100000111000000000000000000000000000000000000000000000000000000000000001016615224035720000021110021534239134330260020100000000000000000000000100000000000000000000006010026000041117010220000013000000000000000000000000000000001103000111000000000000000000000000000000000000000000000010000000000010000001000000010000000000000000000000000035
...................................................................................................................................................................................................TCACAGGATTATACTGTGAGA...................................................................211341.003410000000000000000000000000000000000000001000000000000000000000000000000000000116000000000000000000000400106381202000030000010101000000000000000000000000010200000010000703100001301000020020011000000000000000000000000000100000100000970110700000000010000000000100000000000010000000000000110000000000000000000014100000000000000000000000001
...................................................................................................................................................................................................TCACAGGATTATACTGTGAG....................................................................201335.00335000000000000000000000000000000000000000000000000000000000000000000000000000011774060203120010032110018205820761613001069000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000079
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGC...................................................................231310.003100000001000000000000000000000000000000000000000000010000000000000000000000000296134321700021000000000000002037172120000000700000000100000000000000000000000000000000000000032010012000100000100400000000000000001000000000000000061900010110013000000000000000000000000000000000100000201000200100000010000000000000100000000000000000000000000015
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTG............................................................................................................211290.00290000000100000000000000000000000000000000000100000000000000000000000000000000000010000001000000001000000001101000000000000000000000000000000001101132301006100000107100240224806334113000100000120000000000000002000000414210000210003000000000000001100000010000000000000010100000010000222317711000111011002002701004000203213035200303226150
....................................................................................................................................................................................................CACAGGATTATACTGTGAG....................................................................191254.002540000000000000000000036000000000000200000010000010100000000000000000000000000241050500102100000000021108201837810100000410000000000000000000010000000000001000000000000010042050002000004000000150100000000000000010000003000000000000000000000020000000000000000000000000010000004140200010100000000000000000000001000000000000000000000000006
...........................................................................................................................................................GCAGTATATTTTTGTGTTTT............................................................................................................201175.001750000000000000000000000000200000000100200010111001120100000000000000000000000101000000000000000000000000000000000000000000000000000000000000000040301020071000000001000120000025103300000000000100000000000000000000020120000201001001000000000040100000000000000020200260010070104210011050103010011313000100122500010210000100000000020040
.................................................................................................................................................................................................AATCACAGGATTATACTGA.......................................................................191170.0017000000000000000000000000000000000000000000000000000000000000000000000000000008219200000010000100020000000021110000100100000000001000000000000000000000012000000000000015214070001301301050010003000000000000000001000000000000000510001000000000000000000000000000000000001000000141303001200001110000010200010000000000100000000000000000000
.....................................................................................................................................TAATAACACGTCTCGACGCCT.................................................................................................................................211160.001600000000000000000000000100000000000000110001000011001100000000000000000000000000001000010000000000000000000000000000000000000000200000001000000002001000001000000000000000000000000000000000000000100000000000000000204011126131943131001000001100011100001040002101002110103120000000000401000000000081410100010200100202000101000000200230
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTT...........................................................................................................211157.0015700000000000000000000001008000000000311124201044000107000000000000000000000000100000000000000000000000000000000000000000000000000000000000001030018248000100000010000000000000000000000000000002000000000000200000000000000000000000000000001302121030020243012373013011502400000000001000001300000010000000110000000000000000000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGAA..................................................................241157.0015700000000000001000000000000000000000000000000000000000000000000000000000000002927203100000000000000000000000603000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000039
.........................................................................................................................................................TCGCAGTATATTTTTGTGTTTT............................................................................................................221146.00146000001000000000000000001000000000002000000000100011200000000000000000000000011020000000000000100000300000001100001000000000000010000000000000000051000101100000000000100030022100100000000010000000000000000000000001160001140003000000000000000100000000010001100000343212016001141150000210010000002303000001200000010200000000000011020
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGG...................................................................231138.0013800000000000000000000000000000000000000000000000000000000000000000000000000002020526000000000000000000000001010000000000000000000000000000000500000000000000000000000000022020010000103000000500000000000000000000000000000000042000131100300000000000000000000000000000000000000000100000020000000000000000000000000000000000000000000000008
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGTT.........................................................................................................241136.0013600000000000000000000001000000000000010000000100010100000611000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010010000000600001020000000000000010000000000000000000000000030110001012100100000000003000300000000000001009002047010000000300301142021100000001131200221003211030501110000000010010
.........................................................................................................................................................TCGCAGTATATTTTTGTGTTTTG...........................................................................................................231114.0011400000000000000000000000000100000000010000130110221211000000000000000000000000000000001000000000000000000000000000000000000000001000000000000010002020300100000000000000000001010000000000000000000000000000000000000202001011100100000000000001001101000000000020010301122011014011241120010000100004100000031011200000101000000000000050
......................................................................................................................................AATAACACGTCTCGACGCCT.................................................................................................................................201100.00100000000000000000000000000000000000000000000100000000010000000000000000000000000000001000000000000000000000100000000000000000000000000000000000000130000000000000000000000000000001000000000000000000000000000000000000100011324195140001000010200000000001011000002100003211000000000000001000000000011001000000102010300001000000000000120
.....................................................................................................................................................................................................ACAGGATTATACTGTGA.....................................................................17199.0099000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000480000000000000000000000000000000000000000000000030100027401015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TCACAGGATTATACTGTGA.....................................................................19185.00850000000000000000000000000010000000000000000000000000000000000000000000000000404202001140000000011000110151870200102000000000000000000000000000000000000000000000000000100000330400000000008000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006
...................................................................................................................................................................................................TCACAGGATTATACTGTGAGT...................................................................21184.008400000000000000000000000000100000000000000000010000100000000000000000000000006440000000000000000000000008413000000010000000000000000000000000001000000000000000003000000000000001000000000000000000000000000000000000400000000000006001400000000000000000000000000000000010011010000000030000000000001000000001000000200000000000000000010
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGC..........................................................................................................23182.00820000000000000000000000100000000000000000000000000010100000000000000000000000000100000110000100000000100001000000000000000000000000000000000000000101000031000000001001000110000002000000000000000000000000000000000000000000010030010000000000201000002021001101201000120100001000000022302000000043000000160000000100001000000000011010
droSim2
GA---CCC-------------------------TAACA---TAGAAGTGGTG---------------------------G----------------------GATGG--------------------TGGGGGGAATCACACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGTTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACCAGCGTGC---CAGCAGCAGAAAGCGAATGATATG--------ATATCAATAATATTA---TCSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTG...........................................................................................................2219252.009252514191202396127486214610558937038157321045001
.................................................................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................2116064.00606483536253215765822451122374510700000
.....................................................................................................................................................................................................ACAGGATTATACTGTGAG....................................................................1812799.0027991005010015712706000000
.................................................................................................................................................................................................AATCACAGGATTATACTGT.......................................................................1912483.0024831003341207244501318761800000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................2211611.0016111011923138392204955922000
.................................................................................................................................................................................................AATCACAGGATTATACTG........................................................................1811024.00102451411318519112123182100000
......................................................................................................................................................................................................CAGGATTATACTGTGAG....................................................................171733.00733000000331627684000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTT.............................................................................................................201703.007034112316274002890500000
..........................................................................................................................................................CGCAGTATATTTTTGTGTT..............................................................................................................191614.0061400002762291002105100000
..........................................................................................................................................................CGCAGTATATTTTTGTGT...............................................................................................................181558.005580000275217101062200000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGA...................................................................231558.0055800020044252832004000000
.......................................................................................................................................................................................................AGGATTATACTGTGAG....................................................................161530.00530000000514417695164000000
.................................................................................................................................................................................................AATCACAGGATTATACT.........................................................................171529.0052900000015956103346000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTT............................................................................................................211503.00503100245250242150431934050000
.....................................................................................................................................................................................................ACAGGATTATACTGTGA.....................................................................171448.00448000000121246387000000
.....................................................................................................................................................................................................ACAGGATTATACTGT.......................................................................151392.003920000000000392000000
..............................................................................................................................................................GTATATTTTTGTGTTTTG...........................................................................................................182325.006500000200010646100000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................231314.003140001001465294210000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGA..........................................................................................................231271.002710002002932118755307000
................................................................................................................................................................................TTTCGTTTTGCAACTCAAA........................................................................................191245.00245003100514387573000000
....................................................................................................................................................................................................CACAGGATTATACTGTGAG....................................................................191203.002030002000021198000000
.................................................................................................................................................................................................AATCACAGGATTATACTGC.......................................................................191198.00198136292700000005100000
.................................................................................................................................................................................................AATCACAGGATTATACTGG.......................................................................191191.00191104434300000001000000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGA...................................................................221146.00146000300394432253000000
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTG...........................................................................................................211113.0011300017010001831100000
................................................................................................................................................................................TTTCGTTTTGCAACT............................................................................................153100.00300000000864991560000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTG......................................................................20189.0089141016320110535200000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................22183.008310040020402015100000
..........................................................................................................................................................CGCAGTATATTTTTGT.................................................................................................................16177.0077000000000077000000
........................................................................................................................................................................................................GGATTATACTGTGAG....................................................................15177.00770000000372443000000
......................................................................................................................................................................................................CAGGATTATACTGTGA.....................................................................16171.0071000000017360000000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................22162.0062010000000061000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGT..........................................................................................................23157.00570013191710624013000
................................................................................................................................................................................TTTCGTTTTGCAACTCAAAA.......................................................................................20155.005500100014323112100000
....................................................................................................................................................................................................CACAGGATTATACTGT.......................................................................16147.0047000000000047000000
.............................................................................................................................................................AGTATATTTTTGTGTTTTG...........................................................................................................19245.5091000200000089000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTT...........................................................................................................22141.0041000100001043500000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................21139.00392021030000202000000
.......................................................................................................................................................................................................AGGATTATACTGTGA.....................................................................15137.0037000000261946000000
.....................................................................................................................................................................................................ACAGGATTATACTGTGAGT...................................................................19136.0036000000000234000000
...................................................................................................................................................................................................TCACAGGATTATACTGTGAGA...................................................................21134.003410000099951000000
.................................................................................................................................................................................................AATCACAGGATTATA...........................................................................15131.0031000000100030000000
................................................................................................................................................................................TTTCGTTTTGCAACTCAA.........................................................................................18228.505700000019127181000000
..................................................................................................................................................................................................ATCACAGGATTATACTGT.......................................................................18127.0027000200000025000000
................................................................................................................................................................................TTTCGTTTTGCAACTCAAAAA......................................................................................21426.001040000007952342000000
................................................................................................................................................................................TTTCGTTTTGCAACTCA..........................................................................................17225.00500000002223221000000
.....................................................................................................................................................................................................ACAGGATTATACTGTGAGA...................................................................19121.0021000000003711000000
.....................................................................................................................................................................................................ACAGGATTATACTGTGAA....................................................................18120.0020000000000119000000
....................................................................................................................................................................................................CACAGGATTATACTGTGA.....................................................................18120.0020000100002314000000
..........................................................................................................................................................CGCAGTATATTTTTGTG................................................................................................................17119.0019000000010018000000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................20119.0019000170001100000000
..............................................................................................................................................................GTATATTTTTGTGTTTT............................................................................................................17217.0034000000000034000000
......................................................................................................................................AATCACACGTCTCGACGCCT.................................................................................................................................20113.001342000000007000000
............................................................................................................................................................CAGTATATTTTTGTGTTTTG...........................................................................................................20113.001300041000106100000
.......................................................................................................................................................................................................AGGATTATACTGTGAGA...................................................................17112.001200000012900000000
.....................................................................................................................................................................................................ACAGGATTATACTGTGAGC...................................................................19112.0012000000000012000000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................21111.001100010000505000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTA...........................................................................................................22111.001100000001208000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGAA.........................................................................................................24111.001100000012430001000
...............................................................................................................................................................TATATTTTTGTGTTTTG...........................................................................................................17510.2051000000000051000000
.................................................................................................................................................................................................AATCACAGGATTATACTGA.......................................................................19110.001010000002511000000
................................................................................................................................................................ATATTTTTGTGTTTTG...........................................................................................................1689.3875000000000174000000
......................................................................................................................................................................................................CAGGATTATACTGTGAGA...................................................................1819.00901100000124000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGTT.........................................................................................................2419.00900006110010000000
.....................................................................................................................................................................................................ACAGGATTATACTGTGAT....................................................................1819.00900000000108000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGAAA........................................................................................................2519.00900000000710001000
...........................................................................................................................................................GCAGTATATTTTTGTGTTTT............................................................................................................2018.00800020000006000000
.........................................................................................................................................................TCGCAGTATATTTTTGTGTTTTG...........................................................................................................2318.00800011310002000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTA......................................................................2018.00821300000110000000
.....................................................................................................................................................................................................ACAGGATTATACTGTG......................................................................1617.00700000000016000000
.................................................................................................................................................................TATTTTTGTGTTTTG...........................................................................................................1586.7554000000000054000000
.........................................................................................................................................................TCGCAGTATATTTTTGTGTTT.............................................................................................................2116.00600004200000000000
.....................................................................................................................................................................................................ACAGGATTATACTGTGAGGG..................................................................2016.00600000000006000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGC...................................................................2316.00600000000114000000
.................................................................................................................................................................................................AATCACAGGATTATACTTGA......................................................................2095.67510000001062861000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTAA..........................................................................................................2325.501100000000550100000
.......................................................................................................................................ATCACACGTCTCGACGCCT.................................................................................................................................1915.00521000000002000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGAA..................................................................2415.00500000001220000000
.................................................................................................................................................................................................AATCACAGGATTATACTA........................................................................1815.00500000002021000000
................................................................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................2215.00500000001202000000
........................................................................................................................................TCACACGTCTCGACGCCT.................................................................................................................................1815.00510400000000000000
................................................................................................................................................................................TTTCGTTTTGCAACTC...........................................................................................1624.50900000023220000000
......................................................................................................................................................................................................CAGGATTATACTGTGAGGG..................................................................1914.00400000000004000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTTG..........................................................................................................2314.00400000000004000000
....................................................................................................................................................................................................CACAGGATTATACTG........................................................................1514.00400000000004000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTAA............................................................................................................2114.00400000000310000000
....................................................................................................................................................................................................CACAGGATTATACTGTGAGA...................................................................2014.00400000000400000000
............................................................................................................................................................CAGTATATTTTTGTGTTTT............................................................................................................1914.00400000000004000000
......................................................................................................................................................................................................CAGGATTATACTGTGAGT...................................................................1814.00401000010002000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGTC..................................................................2414.00400000000004000000
.........................................................................................................................................................TCGCAGTATATTTTTGTG................................................................................................................1814.00400001300000000000
.........................................................................................................................................................TCGCAGTATATTTTTGTGT...............................................................................................................1914.00400002000002000000
......................................................................................................................................................................................................CAGGATTATACTGTGAGC...................................................................1814.00400000000004000000
.........................................................................................................................................................TCGCAGTATATTTTTGTGTTTT............................................................................................................2214.00400000000102100000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTG.............................................................................................................2013.00320000000001000000
.....................................................................................................................................GAATCACACGTCTCGACGCCT.................................................................................................................................2113.00300100010001000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTG............................................................................................................2113.00300000000003000000
.................................................................................................................................................................................................AATCACAGGATTATACTT........................................................................1813.00310000000002000000
...................................................................................................................................................................................................TCACAGGATTATACTGT.......................................................................1713.00300000000003000000
...........................................................................................................................................................GCAGTATATTTTTGTGTT..............................................................................................................1813.00300002000001000000
.............................................................................................................................................................AGTATATTTTTGTGTTTT............................................................................................................1822.50500000000005000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................2212.00210000000001000000
...........................................................................................................................................................GCAGTATATTTTTGTG................................................................................................................1612.00200000000002000000
..................................................................................................................................................................................................ATCACAGGATTATACTG........................................................................1712.00200000000002000000
..................................................................................................................................................................................................ATCACAGGATTATACT.........................................................................1612.00200000000002000000
......................................................................................................................................................................................................CAGGATTATACTGTG......................................................................1512.00200000000011000000
.......................................................................................................................................................................................................AGGATTATACTGTGAGT...................................................................1722.00400000000121000000
.........................................................................................................................................................TCGCAGTATATTTTTGTGTT..............................................................................................................2012.00200001000001000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGTTT........................................................................................................2512.00200001100000000000
.....................................................................................................................................................................................................ACAGGATTATACTGTGAGGA..................................................................2012.00200000000002000000
........................................................................................................................................................................................................GGATTATACTGTGAGA...................................................................1612.00200000000110000000
......................................................................................................................................................................................................CAGGATTATACTGTGAT....................................................................1712.00200000000002000000
.................................................................................................................................................................................................AATCACAGGATTATACTAC.......................................................................1912.00220000000000000000
.................................................................................................................................................................................................AATCACAGGATTATAC..........................................................................1612.00200000000002000000
.............................................AGTGGTG---------------------------G----------------------GATGG--------------------TGGGGG......................................................................................................................................................1912.00200000000002000000
.........................................................................................................................................................................................................GATTATACTGTGAGA...................................................................1512.00200000001001000000
..................................................................................................................................................................................TCGTTTTGCAACTCAAATCACAGGATT..............................................................................2712.00220000000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................2112.00200000000002000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGG..........................................................................................................2312.00200020000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGGA......................................................................2012.00200000011000000000
droSec2
CA---GAT-AGT---------------------------AGACA---------GACCCTAACATAGAAGTGGTG-----G-----GG---------------GATGG--------------------TGGGGGGAA--TCACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGTTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACCAGCGTGC---CAGCAGCAAAAAGCGAATGATATT--------------------ATA----TSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTG...........................................................................................................22136133.0036133164311915299519580
.................................................................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................211638.0063827225135206
.................................................................................................................................................................................................AATCACAGGATTATACTGT.......................................................................191530.0053014318187182
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTT............................................................................................................211375.00375857151168
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTG...........................................................................................................211334.003341347819103
..........................................................................................................................................................CGCAGTATATTTTTGTGTTT.............................................................................................................201150.001509401091
..........................................................................................................................................................CGCAGTATATTTTTGTGTT..............................................................................................................19171.0071633230
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................22163.0063461106
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGT..........................................................................................................23156.0056829415
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTG............................................................................................................21144.0044281123
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGA..........................................................................................................23143.0043517813
.................................................................................................................................................................................................AATCACAGGATTATACTGTG......................................................................20142.0042270114
..........................................................................................................................................................CGCAGTATATTTTTGTGT...............................................................................................................18129.002910523
.................................................................................................................................................................................................AATCACAGGATTATACTG........................................................................18125.002530148
.............................................................................................................................................................AGTATATTTTTGTGTTTTG...........................................................................................................19122.002211533
............................................................................................................................................................CAGTATATTTTTGTGTTTTG...........................................................................................................20122.002211515
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTT...........................................................................................................22121.002154210
..........................................................................................................................................................CGCAGTATATTTTTGTGTTG.............................................................................................................20121.002124312
..................................................................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................20120.002020000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTA...........................................................................................................22117.001705111
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTTG..........................................................................................................23114.00143326
..................................................................................................................................................................................................ATCACAGGATTATACTGT.......................................................................18112.001212000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................23111.00110137
..............................................................................................................................................................GTATATTTTTGTGTTTTG...........................................................................................................18111.00112225
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTC...........................................................................................................22110.00100406
...........................................................................................................................................................GCAGTATATTTTTGTGTTTT............................................................................................................20110.00107102
.................................................................................................................................................................................................AATCACAGGATTATACTGA.......................................................................1919.0094113
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................2216.0063021
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................2216.0066000
....................................................................................................................................GGAA--TCACGTCTCGACGCCT.................................................................................................................................2016.0066000
.........................................................................................................................................................TCGCAGTATATTTTTGTGTTTTG...........................................................................................................2315.0051013
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGA...................................................................2215.0055000
......................................................................................................................................................................................................CAGGATTATACTGTGAGA...................................................................1815.0053020
.................................................................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................2114.0040103
.....................................................................................................................................................................................................ACAGGATTATACTGTGAG....................................................................1814.0042020
....................................................................................................................................................................................................CACAGGATTATACTGTGAG....................................................................1914.0043010
.................................................................................................................................................................................................AATCACAGGATTATACTGTT......................................................................2013.0031002
.................................................................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................2113.0032010
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTGA..........................................................................................................2212.0021001
.........................................................................................................................................................TCGCAGTATATTTTTGTGTTTT............................................................................................................2212.0021001
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTC............................................................................................................2112.0021001
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTT...........................................................................................................2112.0022000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................2212.0022000
................................................................................................................................................................................TTTCGTTTTGCAACTCAAA........................................................................................1912.0020020
.................................................................................................................................................................................................AATCACAGGATTATACTT........................................................................1812.0020002
...................................................................................................................................................................................................TCACAGGATTATACTGTGAGA...................................................................2112.0022000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................2112.0022000
................................................................................................................................GGGGGGAA--TCACGTCTCGACGCCT.................................................................................................................................2412.0022000
...........................................................................................................................................................GCAGTATATTTTTGTGTTT.............................................................................................................1912.0021001
...............................................................................................................................TGGGGGGAA--TCACGTCTCGACGCCT.................................................................................................................................2512.0022000
................................................................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................2212.0021010
.........................................................................................................................................................TCGCAGTATATTTTTGTGTTTTGTTTC.......................................................................................................2711.0010100
..........................................................................................................................................................CGCAGTATATTTTTGTGC...............................................................................................................1811.0010001
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGG...................................................................2211.0011000
.................................................................................................................................................................................................AATCACAGGATTATACTGG.......................................................................1911.0011000
.......................................................................................................................................................................................................................ATGACCAGCGTGC---CAGCAGCAA...........................................2211.0011000
...........................................................................................................................................................GCAGTATATTTTTGTGTT..............................................................................................................1811.0011000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGTT.........................................................................................................2411.0010100
......................................................................................................................................................................................TTTGCAACTCAAATCACAGGAT...............................................................................2211.0011000
..........................................................................................................................................................CGCAGTATATTTTTGTGTG..............................................................................................................1911.0010100
...................................................................................................................................................................................................TCACAGGATTATACTGTGA.....................................................................1911.0011000
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTTG..........................................................................................................2221.0022000
.................................................................................................................................................................................................AATCACAGGATTATACTGTAGA....................................................................2211.0010010
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGG..........................................................................................................2311.0011000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGTT....................................................................2211.0010001
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTTGA.........................................................................................................2411.0011000
..................................................................................................................................GGGGAA--TCACGTCTCGACGCCT.................................................................................................................................2211.0011000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGC...................................................................2311.0011000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGC..........................................................................................................2311.0011000
.................................................................................................................................................................................................AATCACAGGATTATACTGTA......................................................................2011.0010001
................................................................................................................................................................................TTTCGTTTTGCAACTCAAAA.......................................................................................2011.0011000
.................................................................................................................................................................................................AATCACAGGATTATACTGC.......................................................................1911.0010010
...........................................................................................................................................................GCAGTATATTTTTGTGTTG.............................................................................................................1911.0010010
..........................................................................................................................................................CGCAGTATATTTTTGTGTTA.............................................................................................................2011.0010001
...................................................................................................................................GGGAA--TCACGTCTCGACGCCT.................................................................................................................................2111.0011000
.....................................................................................................................................................................................................ACAGGATTATACTGTGAGT...................................................................1911.0010001
..........................................................................................................................................................CGCAGTATATTTTTGTGTC..............................................................................................................1911.0010100
............................................................................................................................................................CAGTATATTTTTGTGTTT.............................................................................................................1811.0011000
...............................................................................................................................................................................................CAAATCACAGGATTATACTGTG......................................................................2211.0011000
............................................................................................................................................................CAGTATATTTTTGTGTTTTGTTTC.......................................................................................................2411.0010010
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGG...................................................................2311.0010010
.....................................................................................................................................................................................................ACAGGATTATACTGTGAGC...................................................................1911.0011000
.......................................................................................................................................................................................TTGCAACTCAAATCACAGGATTATACTGT.......................................................................2911.0010100
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGTTTC.......................................................................................................2611.0010010
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGC...................................................................2211.0011000
droYak3
AA---ATT-AATTAACCCCGCCCTCTTTTCACT-------ATGGAAGTGCTT---------------------------T----------------GCCCGCCATCCGGA---------TGAGA---TGGGGGGAATCACACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCCTTTTGCAACTCAAATCACAGGATTATACTGTGAGATGACCAGCGTGC---CAGCAGCAGAAAGTGACTGACAAG-AT------------CTG---TA---TTSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.................................................................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................2112843.00284381699921952547600042
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTG...........................................................................................................2211564.00156434348475151111953140000
.................................................................................................................................................................................................AATCACAGGATTATACTGT.......................................................................191398.003981517536102950470000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................221158.00158010323801000023
.................................................................................................................................................................................................AATCACAGGATTATACTGTG......................................................................201111.001111107200100000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................20191.0091091000000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTT............................................................................................................21187.00870292337970000
.................................................................................................................................................................................................AATCACAGGATTATACTG........................................................................18179.00796301111201000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTT...........................................................................................................22160.006001113331200000
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTG...........................................................................................................21148.0048036053220000
.................................................................................................................................................................................................AATCACAGGATTATACTGC.......................................................................19146.00462801411200000
.................................................................................................................................................................................................AATCACAGGATTATACTGG.......................................................................19114.0014140000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................23111.001105420000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTT..............................................................................................................19111.001104150010000
................................................................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................2218.00805300000000
...................................................................................................................................................................................................TCACAGGATTATACTGTGA.....................................................................1916.00606000000000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGA...................................................................2216.00606000000000
.............................................................................................................................................................AGTATATTTTTGTGTTTTG...........................................................................................................1916.00605000010000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................2116.00621300000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGT..........................................................................................................2316.00602201010000
....................................................................................................................................................................................................CACAGGATTATACTGTGAG....................................................................1916.00606000000000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................2215.00504100000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................2215.00504100000000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................2115.00505000000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGA..........................................................................................................2315.00501121000000
............................................................................................................................................................CAGTATATTTTTGTGTTTTG...........................................................................................................2014.00401210000000
..................................................................................................................................................................................................ATCACAGGATTATACTGTG......................................................................1914.00404000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAC....................................................................2214.00401300000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTT.............................................................................................................2013.00301002000000
.....................................................................................................................................................................................................ACAGGATTATACTGTGAG....................................................................1813.00301101000000
..................................................................................................................................................................................................ATCACAGGATTATACTGT.......................................................................1813.00303000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGA.......................................................................1912.00201100000000
...........................................................................................................................................................GCAGTATATTTTTGTGTTTT............................................................................................................2012.00202000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTA......................................................................2012.00220000000000
.........................................................................................................................................................TCGCAGTATATTTTTGTGTTTTG...........................................................................................................2312.00202000000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTA...........................................................................................................2212.00201010000000
................................................................................................................................................................................TTTCCTTTTGCAACTCAAA........................................................................................1912.00201100000000
...................................................................................................................................................................................................TCACAGGATTATACTGTGAG....................................................................2012.00202000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGC...................................................................2312.00200200000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGA...................................................................2312.00202000000000
.........................................................................................................................................................TCGCAGTATATTTTTGTGTTTT............................................................................................................2212.00201010000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTTT.....................................................................2111.00100000100000
.................................................................................................................................................................................................................................TGC---CAGCAGCAGAAAGTGACT..................................2111.00110000000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGAA.........................................................................................................2411.00100010000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGATT...................................................................2311.00101000000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGTTTCCT.....................................................................................................2811.00101000000000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGG...................................................................2211.00101000000000
........................................................................................................................................................................................TGCAACTCAAATCACAGGATTATACTG........................................................................2711.00101000000000
................................................................................................................................................................................................AAATCACAGGATTATACTG........................................................................1911.00101000000000
.......................................................................................................................................................................................TTGCAACTCAAATCACAGGATTATAC..........................................................................2611.00101000000000
......................................................................................................................................................................................................CAGGATTATACTGTGAGA...................................................................1811.00101000000000
....................................................................................................................................GGAATCACACGTCTCGACGCCT.................................................................................................................................2211.00101000000000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAT....................................................................2111.00101000000000
....................................................................................................................................................................................................CACAGGATTATACTGTGA.....................................................................1811.00101000000000
..............................................................................................................................................................GTATATTTTTGTGTTTTG...........................................................................................................1811.00101000000000
...........................................................................................................................A---TGGGGGGAATCACACGTCTCGACGCCT.................................................................................................................................2811.00100100000000
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTC...........................................................................................................2111.00100000010000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................2111.00100001000000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAA....................................................................2111.00101000000000
...........................................................................................................................................................GCAGTATATTTTTGTGTT..............................................................................................................1811.00101000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................2211.00101000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGAT..................................................................2411.00100100000000
.................................................................................................................................GGGGGAATCACACGTCTCGACGCCT.................................................................................................................................2511.00100100000000
.....................................................................................................................................GAATCACACGTCTCGACGCCT.................................................................................................................................2111.00101000000000
................................................................................................................................GGGGGGAATCACACGTCTCGACGCCT.................................................................................................................................2611.00100100000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTAA..........................................................................................................2311.00100010000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGC..........................................................................................................2311.00100100000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTC...........................................................................................................2211.00101000000000
.................................................................................................................................................................................................AATCACAGGATTATACTTGA......................................................................2060.50300300000000
................................................................................................................................................................................TTTCCTTTTGCAACTCAAG........................................................................................1920.50100100000000
droEre2
TC---CTC----------------------CCC-------ACCAAAGTGCTT---------------------------T----------------GCCCGCCGTCCGGA---------TGATA---TGGGGGGAATCACACGTCTCGACGCCTCGCAGTATATTTTTGTGTTTTGTTTCGTTTTGCAAATCAAATCACAGGATTATACTGTGAGATGACCAGCGTGCCGCCAGCAGCAGAAAGTGACTGACCAG-AT------------TTG---TA---TTSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTG...........................................................................................................2218615.0086159407586156185450639
.................................................................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................2111217.0012176906246484030130
.................................................................................................................................................................................................AATCACAGGATTATACTGT.......................................................................191506.005061351521261501590
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTT............................................................................................................211399.003998741715672090
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTG...........................................................................................................211143.001439103024250
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTT...........................................................................................................221120.001204053490140
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................221115.001158210141413
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGTT.........................................................................................................241105.0010540013691
.................................................................................................................................................................................................AATCACAGGATTATACTGTG......................................................................20183.0083540402221
..........................................................................................................................................................CGCAGTATATTTTTGTGTTT.............................................................................................................20167.00671213214350
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGT..........................................................................................................23154.005420208537
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................23142.004230012531
..................................................................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................20135.003535000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTT..............................................................................................................19127.002720239110
.............................................................................................................................................................AGTATATTTTTGTGTTTTG...........................................................................................................19122.00229011650
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGA..........................................................................................................23121.00212020278
.................................................................................................................................................................................................AATCACAGGATTATACTG........................................................................18119.001952000120
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGTTT........................................................................................................25114.001400000113
...............................................................................................................................................................................................CAAATCACAGGATTATACTGTGA.....................................................................23113.00137301020
............................................................................................................................................................CAGTATATTTTTGTGTTTTG...........................................................................................................20112.00125000250
..........................................................................................................................................................CGCAGTATATTTTTGTGT...............................................................................................................18111.00110000290
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGA...................................................................23111.001110000010
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................22111.001110000010
...........................................................................................................................................................GCAGTATATTTTTGTGTTTT............................................................................................................20110.00108010010
.................................................................................................................................................................................................AATCACAGGATTATACTGA.......................................................................1919.0097000020
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................2118.0088000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTA...........................................................................................................2218.0083000230
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................2217.0073001030
..........................................................................................................................................................CGCAGTATATTTTTGTGTTG.............................................................................................................2017.0070000250
.................................................................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................2117.0070000160
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTTG..........................................................................................................2316.0060000150
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGA...................................................................2216.0065000010
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTG............................................................................................................2116.0061000320
.................................................................................................................................................................................................AATCACAGGATTATACTGC.......................................................................1916.0060510000
..................................................................................................................................................................................................ATCACAGGATTATACTGTG......................................................................1916.0065000010
.........................................................................................................................................................TCGCAGTATATTTTTGTGTTTTG...........................................................................................................2316.0061010040
..............................................................................................................................................................GTATATTTTTGTGTTTTG...........................................................................................................1815.0051000220
................................................................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................2214.0043100000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................2214.0044000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTC...........................................................................................................2214.0042002000
...............................................................................................................................................................................................CAAATCACAGGATTATACTGTG......................................................................2214.0044000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGG..........................................................................................................2313.0032000010
...................................................................................................................................................................................................TCACAGGATTATACTGTGA.....................................................................1913.0033000000
...................................................................................................................................................................................................TCACAGGATTATACTGTGAGA...................................................................2113.0033000000
......................................................................................................................................AATCACACGTCTCGACGCCT.................................................................................................................................2013.0030100110
..................................................................................................................................................................................................ATCACAGGATTATACTGT.......................................................................1813.0033000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTT......................................................................2013.0031000020
............................................................................................................................................................CAGTATATTTTTGTGTTTTGTT.........................................................................................................2213.0032000100
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGC...................................................................2313.0030000003
......................................................................................................................................................................................................CAGGATTATACTGTGAG....................................................................1712.0020000002
.....................................................................................................................................................................................................ACAGGATTATACTGTGAG....................................................................1812.0021000010
...........................................................................................................................................................GCAGTATATTTTTGTGTTT.............................................................................................................1912.0021000010
.....................................................................................................................................GAATCACACGTCTCGACGCCT.................................................................................................................................2112.0021100000
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTT...........................................................................................................2112.0020001010
.................................................................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................2112.0021000010
...................................................................................................................................GGGAATCACACGTCTCGACGCCT.................................................................................................................................2311.0011000000
.................................................................................................................................................................................................AATCACAGGATTATACTTGA......................................................................20101.00108000020
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTGC..........................................................................................................2211.0011000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAC....................................................................2211.0011000000
...................................................................................................................................................................................................TCACAGGATTATACTGTGAG....................................................................2011.0011000000
.......................................................................................................................................................................................................................ATGACCAGCGTGCCGCCAGCAGC.............................................2311.0010000010
.......................................................................................................................................ATCACACGTCTCGACGCCT.................................................................................................................................1911.0010000100
................................................................................................................................................................................................AAATCACAGGATTATACTGTG......................................................................2111.0011000000
................................................................................................................................................................................................AAATCACAGGATTATACTGT.......................................................................2011.0010100000
...............................................................................................................................................................................................CAAATCACAGGATTATACTGT.......................................................................2111.0010000100
...................................................................................................................................................................................................TCACAGGATTATACTGTGAGT...................................................................2111.0011000000
..............................................................................................................................................................GTATATTTTTGTGTTTTGT..........................................................................................................1911.0010000100
..............................................................................................................................................................................................TCAAATCACAGGATTATACTG........................................................................2111.0010010000
.................................................................................................................................................................................................AATCACAGGATTATACTT........................................................................1811.0010000010
.................................................................................................................................................................................................AATCACAGGATTATACTGTA......................................................................2011.0010000100
....................................................................................................................................................................................................CACAGGATTATACTGTGAG....................................................................1911.0010000010
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGTTTC.......................................................................................................2611.0010001000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAA....................................................................2111.0011000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTTG.....................................................................2111.0011000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGC..........................................................................................................2311.0011000000
.............................................................................................................................................................AGTATATTTTTGTGTTTT............................................................................................................1811.0010000010
..................................................................................................................................................................................................ATCACAGGATTATACTGTGTT....................................................................2111.0011000000
dp5
TC---TCA-------------------------GAACATCTCCAAAGTGTTT---------------------------TC----------------CTAGGTGTGCCG----------AAAG------------AAGCGGCGTCTTGACGCCTCGCAGTATATTTTTGTGTTTTGTTGT-GTCTGAAACGCAAATCACAGGATTATACTGTGAGATGCTGGGCGTGC---TATCAAGAGAGTGTGAACGG------------AACCCAAGTG---TATTTTGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.................................................................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................2112481.00248112034113192655913400
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTG...........................................................................................................2212302.002302359333546047266531319
.................................................................................................................................................................................................AATCACAGGATTATACTGT.......................................................................191391.00391927417138448000
.................................................................................................................................................................................................AATCACAGGATTATACTGTG......................................................................201264.002640248040111000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................221162.001620102114504540
..................................................................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................201110.00110011000000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTT............................................................................................................21189.008901831202420012
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTG...........................................................................................................21166.006605200635000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTT.............................................................................................................20146.0046018104518000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTT...........................................................................................................22135.0035010022120000
................................................................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................22130.003002063100000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGT..........................................................................................................23128.002801520224030
..........................................................................................................................................................CGCAGTATATTTTTGTGTT..............................................................................................................19124.00240900726000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................23124.002403101201430
..................................................................................................................................................................................................ATCACAGGATTATACTGT.......................................................................18122.002202200000000
....................................................................................................................................................................................................CACAGGATTATACTGTGAG....................................................................19119.001901900000000
..................................................................................................................................................................................................ATCACAGGATTATACTGTG......................................................................19118.001801800000000
.................................................................................................................................................................................................AATCACAGGATTATACTG........................................................................18118.00188143110000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................21114.001401400000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGA..........................................................................................................23112.00120110611200
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................22110.001001000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGA...................................................................2319.0090100000710
................................................................................................................................................................................................AAATCACAGGATTATACTGTG......................................................................2118.0080800000000
.................................................................................................................................................................................................AATCACAGGATTATACTGC.......................................................................1918.0081052000000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGA...................................................................2218.0080800000000
............................................................................................................................................................CAGTATATTTTTGTGTTTTG...........................................................................................................2017.0070400102000
.............................................................................................................................................................AGTATATTTTTGTGTTTTG...........................................................................................................1917.0070700000000
..............................................................................................................................................................GTATATTTTTGTGTTTTG...........................................................................................................1816.0060600000000
...................................................................................................................................................................................................TCACAGGATTATACTGTGAG....................................................................2016.0060600000000
...........................................................................................................................................................GCAGTATATTTTTGTGTTTT............................................................................................................2015.0050400010000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................2214.0040211000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................2114.0040211000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGTTG........................................................................................................2514.0040100110010
...................................................................................................................................................................................................TCACAGGATTATACTGTGAGA...................................................................2114.0040400000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................2113.0030200010000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAC....................................................................2213.0030300000000
................................................................................................................................................................................................AAATCACAGGATTATACTGT.......................................................................2013.0030200100000
................................................................................................................................................................................................AAATCACAGGATTATACTG........................................................................1912.0021000010000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGTT....................................................................2212.0020200000000
.........................................................................................................................................................TCGCAGTATATTTTTGTGTTTTG...........................................................................................................2312.0020100010000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGTT.........................................................................................................2412.0020000002000
...........................................................................................................................................................GCAGTATATTTTTGTGTTT.............................................................................................................1912.0020200000000
...................................................................................................................................................................................................TCACAGGATTATACTGTGA.....................................................................1912.0020200000000
...........................................................................................................................................................GCAGTATATTTTTGTGTT..............................................................................................................1812.0020100010000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAA....................................................................2111.0010100000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTC...........................................................................................................2211.0010000010000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGAA..................................................................2411.0010000000100
.................................................................................................................................................................................................AATCACAGGATTATACTGTGC.....................................................................2111.0010100000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTA...........................................................................................................2211.0010000010000
...................................................................................................................................................................................................TCACAGGATTATACTGTGAGT...................................................................2111.0010100000000
...........................................AAAGTGTTT---------------------------TC----------------CTAGGTGTG.................................................................................................................................................................................2011.0010100000000
......................................................................................................................................................................................................CAGGATTATACTGTGAGA...................................................................1811.0010010000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................2211.0010100000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGATT...................................................................2311.0010100000000
.................................................................................................................................................................................................AATCACAGGATTATACTGA.......................................................................1911.0010100000000
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTGTTG........................................................................................................2411.0010100000000
...................................................................................................................................................................................................TCACAGGATTATACTGTG......................................................................1811.0010100000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTT......................................................................2011.0010000001000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGC...................................................................2211.0010100000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGACC...................................................................2311.0010100000000
..........................................................................................................................................................................................AAACGCAAATCACAGGATTATACTGTGA.....................................................................2811.0010100000000
........................................................................................................................AAG------------AAGCGGCGTCTTGACGCCT.................................................................................................................................2211.0010100000000
.....................................................................................................................................................................................................ACAGGATTATACTGTGAG....................................................................1811.0010100000000
................................................................................................................................................................................................AAATCACAGGATTATACTGTGAG....................................................................2311.0010100000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTA......................................................................2011.0010100000000
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTGT..........................................................................................................2211.0010100000000
..........................................................................................................................................................CGCAGTATATTTTTGTGT...............................................................................................................1811.0010000010000
................................................................................................................................................................................................AAATCACAGGATTATACTGTGAGT...................................................................2411.0010100000000
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTT...........................................................................................................2111.0010100000000
....................................................................................................................................................................................................CACAGGATTATACTGTGA.....................................................................1811.0010100000000
..........................................................................................................................................................CGCAGTATATTTTTGT.................................................................................................................1611.0010000000010
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGC..........................................................................................................2311.0010010000000
.......................................................................................................................................................................................................................ATGCTGGGCGTGC---TATCAAGAGA..........................................2311.0010000100000
................................................................................................................................................................................................AAATCACAGGATTATACTGTGG.....................................................................2211.0010100000000
..............................................................................................................................................................GTATATTTTTGTGTTTTGT..........................................................................................................1911.0010100000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTA............................................................................................................2111.0010100000000
..................................................................................................................................................................................................ATCACAGGATTATACTGTA......................................................................1911.0010100000000
....................................................................................................................................................................................................CACAGGATTATACTGTGAGA...................................................................2011.0010100000000
..........................................................................................................................................................CGCAGTATATTTTTGTGTAA.............................................................................................................2020.5010000100000
................................................................................................................................................................................TTGT-GTCTGAAACGCAAAG.......................................................................................1920.5010100000000
.......................................................................................................................................................................................................AGGATTATACTGTGAGAA..................................................................1830.3310100000000
................................................................................................................................................................................TTGT-GTCTGAAACGCAAAAA......................................................................................2060.1710100000000
droPer2
TC---TCA-------------------------GAACATCTCCAATGTGTTT---------------------------TC----------------CTAGGTGTGCCG----------AAAG------------AATCGGCGTCTTGACGCCTCGCAGTATATTTTTGTGTTTTGTTGT-GTCTGAAACGCAAATCACAGGATTATACTGTGAGATGCTGGGCGTGC---TATCAGAGA-GTGTGAAAGG------------AACCCAAGTG---TA---TTSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.................................................................................................................................................................................................AATCACAGGATTATACTGT.......................................................................1911558.001558126846100341064
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTG...........................................................................................................2211235.00123540150195263148439
.................................................................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................211410.00410818735561204
.................................................................................................................................................................................................AATCACAGGATTATACTG........................................................................181236.0023622500470
.................................................................................................................................................................................................AATCACAGGATTATACTGG.......................................................................191176.0017617501000
.................................................................................................................................................................................................AATCACAGGATTATACTGC.......................................................................191117.0011711600100
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTT............................................................................................................21149.00490947722
..........................................................................................................................................................CGCAGTATATTTTTGTGTTT.............................................................................................................20130.00300447213
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................22129.00290192350
.................................................................................................................................................................................................AATCACAGGATTATACTGTG......................................................................20127.00270160830
..........................................................................................................................................................CGCAGTATATTTTTGTGTT..............................................................................................................19125.00250213019
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTT...........................................................................................................22125.00250112381
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTG...........................................................................................................21118.0018073116
..................................................................................................................................................................................................ATCACAGGATTATACTGT.......................................................................18111.0011830000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................20110.00100100000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................2317.007012121
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGA..........................................................................................................2316.006021003
....................................................................................................................................................................................................CACAGGATTATACTGTGAG....................................................................1913.003030000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................2213.003030000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................2113.003030000
................................................................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................2213.003030000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGT..........................................................................................................2312.002010010
......................................................................................................................................................................................................CAGGATTATACTGTGAGT...................................................................1812.002110000
..........................................................................................................................................................CGCAGTATATTTTTGTGT...............................................................................................................1812.002002000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................2112.002200000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................2112.002000110
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTC...........................................................................................................2212.002000011
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGA...................................................................2312.002020000
......................................................................................................................................................................................................CAGGATTATACTGTGAGA...................................................................1812.002110000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................2211.001010000
..................................................................................................................................................................................................ATCACAGGATTATACTGC.......................................................................1811.001100000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................2211.001010000
.................................................................................................................................................................................................AATCACAGGATTATACTAC.......................................................................1911.001100000
...........................................................................................................................................................GCAGTATATTTTTGTGTTTT............................................................................................................2011.001010000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTA............................................................................................................2111.001010000
.................................................................................................................................................................................................AATCACAGGATTATACTGGA......................................................................2011.001010000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAC....................................................................2211.001000010
...................................................................................................................................................................................................TCACAGGATTATACTGTGAGT...................................................................2111.001000100
...........................................................................................................................................................................................AACGCAAATCACAGGATTATAC..........................................................................2211.001010000
.....................................................................................................................................................................................................ACAGGATTATACTGTGAGT...................................................................1911.001010000
................................................................................................................................................................................................AAATCACAGGATTATACTGTGAGA...................................................................2411.001010000
.......................................................................................................................................................................................................................ATGCTGGGCGTGC---TATCAGAGA-GTGTGA....................................2811.001000001
............................................................................................................................................................CAGTATATTTTTGTGTTTTG...........................................................................................................2011.001010000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGC.....................................................................2111.001000010
....................................................................................................................................................................................................CACAGGATTATACTGTGA.....................................................................1811.001010000
...............................................................................................................................................................................GTTGT-GTCTGAAACGCAAA........................................................................................1911.001000001
.............................................................................................................................................................AGTATATTTTTGTGTTTTG...........................................................................................................1911.001001000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGTTG........................................................................................................2511.001000100
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGG..........................................................................................................2311.001010000
..................................................................................................................................................................................................ATCACAGGATTATACTGTG......................................................................1911.001010000
................................................................................................................................................................................................AAATCACAGGATTATACTGTG......................................................................2111.001010000
..............................................................................................................................................................GTATATTTTTGTGTTTTG...........................................................................................................1811.001000001
.....................................ATCTCCAATGTGTTT---------------------------TC----------------CTAG......................................................................................................................................................................................2111.001010000
..................................................................................................................................................................................................ATCACAGGATTATACTGG.......................................................................1811.001100000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGA...................................................................2211.001010000
...................................................................................................................................................................................................TCACAGGATTATACTGTGAGA...................................................................2111.001010000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTTA..........................................................................................................2311.001001000
..........................................................................................................................................................CGCAGTATATTTTTGTGC...............................................................................................................1820.501100000
.................................................................................................................................................................................................AATCACAGGATTATACTGCCT.....................................................................2120.501000010
droWil2
CC---AAC--------------------------------ACCAACATGCTG---------------------------G-----ATACTGATTAAGGCTC----------TCGTCGACCACA------------G--ACTATTCTTG-CGTCTCGCAGTATATTTTTGTGTTTTGTTCAATTTGTCAACTCAAATCACAGGATTATACTGTGAGCTGCGAAATGGAA----ATCCACGCAACCAT------------TTTAAAATCAAATTGACTTA---AASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTG...........................................................................................................2215015.00501546158623999750
.................................................................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................211981.00981495224264142
.................................................................................................................................................................................................AATCACAGGATTATACTGT.......................................................................191782.007823171774817862
.................................................................................................................................................................................................AATCACAGGATTATACTG........................................................................181202.0020218060142
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTT............................................................................................................211201.0020108015142
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................221162.0016201230345
.................................................................................................................................................................................................AATCACAGGATTATACTGTG......................................................................20166.00663440415
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTG...........................................................................................................21145.00450160227
.................................................................................................................................................................................................AATCACAGGATTATACTGC.......................................................................19136.0036360000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................20131.0031031000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGA..........................................................................................................23128.0028000280
.................................................................................................................................................................................................AATCACAGGATTATACTGG.......................................................................19219.0038380000
..........................................................................................................................................................CGCAGTATATTTTTGTGTT..............................................................................................................19119.0019000154
..................................................................................................................................................................................................ATCACAGGATTATACTGT.......................................................................18116.0016016000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGT..........................................................................................................23114.001424071
.................................................................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................21112.0012101001
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................21111.0011011000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................23111.001101091
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTT...........................................................................................................22111.0011000101
..........................................................................................................................................................CGCAGTATATTTTTGTGTTT.............................................................................................................20110.001000091
.....................................................................................................................................................................................................ACAGGATTATACTGTGAG....................................................................1819.00906021
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................2218.00802033
....................................................................................................................................................................................................CACAGGATTATACTGTGAG....................................................................1917.00704012
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................2217.00706010
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTA...........................................................................................................2217.00700061
................................................................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................2216.00603030
.............................................................................................................................................................AGTATATTTTTGTGTTTTG...........................................................................................................1915.00503020
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTTG..........................................................................................................2315.00501031
..............................................................................................................................................................GTATATTTTTGTGTTTTG...........................................................................................................1815.00502030
......................................................................................................................................................................................................CAGGATTATACTGTGAGA...................................................................1814.00404000
.......................................................................................................................CACA------------G--ACTATTCTTG-CGTCT.................................................................................................................................2014.00400040
..........................................................................................................................................................CGCAGTATATTTTTGTGT...............................................................................................................1814.00400040
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAAA...................................................................2314.00402020
...........................................................................................................................................................GCAGTATATTTTTGTGTTTT............................................................................................................2014.00401012
............................................................................................................................................................CAGTATATTTTTGTGTTTTG...........................................................................................................2014.00401021
......................................................................................................................................................................................................CAGGATTATACTGTGAGT...................................................................1814.00413000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTG............................................................................................................2114.00400031
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGA...................................................................2213.00303000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGTT.........................................................................................................2413.00300030
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAC....................................................................2213.00303000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTC...........................................................................................................2213.00300021
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGA...................................................................2312.00202000
.................................................................................................................................................................................................AATCACAGGATTATACTGA.......................................................................1912.00201010
.....................................................................................................................ACCACA------------G--ACTATTCTTG-CGTCT.................................................................................................................................2212.00200020
..........................................................................................................................................................CGCAGTATATTTTTGTGTTG.............................................................................................................2012.00200020
..................................................................................................................TCGACCACA------------G--ACTATTCTTG-CGT...................................................................................................................................2312.00200002
....................................................................................................................................................................................................CACAGGATTATACTGTGAGA...................................................................2011.00101000
...................................................................................................................................................................................................TCACAGGATTATACTGTGAG....................................................................2011.00101000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTAA..........................................................................................................2311.00100010
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................2211.00101000
.......................................................................................................................................................................................TGTCAACTCAAATCACAGGATT..............................................................................2211.00101000
................................................................................................................................................................................................AAATCACAGGATTATACTGTG......................................................................2111.00101000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGAA.........................................................................................................2411.00100010
.................................................................................................................................................................................................AATCACAGGATTATACTGTGC.....................................................................2111.00100010
................................................................................................................................................................................................AAATCACAGGATTATACTGT.......................................................................2011.00101000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGAAA........................................................................................................2511.00100010
.................................................................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................2111.00100010
......................................................................................................................................................................................................CAGGATTATACTGTGAGG...................................................................1811.00100010
................................................................................................................................................................................TTCAATTTGTCAACTCAAATCACAGGATT..............................................................................2911.00110000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGTTCAATT....................................................................................................2911.00101000
..................................................................................................................................................................................................ATCACAGGATTATACTGTG......................................................................1911.00101000
.......................................................................................................................................................................................TGTCAACTCAAATCACAGGATTATACT.........................................................................2711.00101000
.................................................................................................................................................................................................AATCACAGGATTATACTGGA......................................................................2030.67200002
.................................................................................................................................................................................................AATCACAGGATTATACTGAC......................................................................2020.50101000
droVir3
TT---GCT-------------------------TTATTTATTTATTGTTATTTTAATTTG-------------------------------------------------T---------AGCC------------AA--CGCA-TTCGATGTCTCGCAGTATACTTTTGTGTTTTGTTTA-TTTTGAAAATCAAATCACAGGATTATACTGTGAGTTATCGGCTGTAG---CAACAACAAAAATCCATTT----------TAGACACAAAGCTTTATA---TGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..........................................................................................................................................................CGCAGTATACTTTTGTGTTTTG...........................................................................................................22134514.0034514446910936736211327129168428020961971197746994533343511723272658513331179446360142393187221962663242142029711010223242632201311301122251025428956544574514297524554551411040252
.................................................................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................2118519.00851963132521418654511340103391661101717883221634613704723613879359416726914311351287000000000000000000102999651623113097715167551210000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................2215754.0057540019703120801102088533650261914690510851252204411414213364410142371011000000000000000000003113901173155700002010000000
.................................................................................................................................................................................................AATCACAGGATTATACTGT.......................................................................1911620.001620493261354496103139130023315314592615132332141427593131653737010000000021000441093311621223013176658964808110000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................2311157.0011570070303110400032281516613024276402093785338160114423148700000000000000000000308829221200000000300000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGA...................................................................231890.0089000600010000010011110001000200000000131100000000000000000000000649436900000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTG........................................................................181599.0059947140151000000000100011302131231614131411210151012012001105101110100121320239523944535350013
.................................................................................................................................................................................................AATCACAGGATTATACTGTG......................................................................201498.0049806287001001000002188125120171817310265124024522400000000000000000000101201725111000020000
..........................................................................................................................................................CGCAGTATACTTTTGTGTTTT............................................................................................................211497.0049700630735041313107561155110121243158411422724213818221130000000000000000000034903130030000000010
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAAA...................................................................231365.003650028000001000000000000000511000000203171000000000000000000000000019910700000000000000
...........................................................................................................................................................GCAGTATACTTTTGTGTTTTG...........................................................................................................211250.002500010000430200113110010000042873102100200210000000000000000000301065000171371682400000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................221220.002200012230200010006302121247910342410109072617861000100000000000000001212100006031100000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................221202.0020200290000000000042322001003072100160239200000000000000000000000015387000000000000000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................201201.002010018900000100000000000000000010000000000000000000000000000000000100000000000000000
.................................................................................................................................................................................................AATCACAGGATTATACT.........................................................................171175.00175000000000000000000000000000000000000000000010000000000022010002033261945000000350036
.....................................................................................................................................................................................................ACAGGATTATACTGTGAG....................................................................181174.0017400001010100000614314344119016910013042204100000000000000000000100264100410020210000
..........................................................................................................................................................CGCAGTATACTTTTGTGTTTTT...........................................................................................................221142.00142001000053241435138133271000002000030000210000000000000000000591300000032000000000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................211120.001200013000000000000001000000000000000100100000000000000000000000001040000000000000000
................................................................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................22199.00990041600000000002110120030234100001002110000000000000000000000000121310000000100000
..........................................................................................................................................................CGCAGTATACTTTTGTGTTTTGA..........................................................................................................23194.0094005100001000012201100010326923034021213140000000000000000000030204600000000000000
..........................................................................................................................................................CGCAGTATACTTTTGTGTTTTGT..........................................................................................................23193.009301139330000000110401001361108332341222152000001000000000000000100100020002000000
..............................................................................................................................................................GTATACTTTTGTGTTTTG...........................................................................................................18185.0085004012121737011100000100112210000000000200000000000000000000000001000757311100000
.........................................................................................................................................................TCGCAGTATACTTTTGTGTTTT............................................................................................................22173.007300800000000002141200012121611130810241200000000000000000000000005400000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGG...................................................................23168.0068005000000000000000000000000000000001000000000000000000000000000352700000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGG.......................................................................19167.0067105500000000000000000000000000000000000000000000000000000000001000000001000000000
........................................................................................................................GCC------------AA--CGCA-TTCGATGTCT.................................................................................................................................19154.005400600040200000001000000271134111300101001000000000000000000003000000001001000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAAAA..................................................................24153.0053005000000000000000000000000000000010000000000000000000000000000182900000000000000
................................................................................................................................................................................................AAATCACAGGATTATACTGTGAG....................................................................23153.0053006000000000001110000000004100004021110000000000000000000000004161000000000000000
.........................................................................................................................................................TCGCAGTATACTTTTGTGTTTTG...........................................................................................................23149.00490021011000000000000000100133031010002011000000000000000000001103000038226100000
..........................................................................................................................................................CGCAGTATACTTTTGTGTTTTC...........................................................................................................22144.00440022101000000012020212000000742900000001000000000000000000013000000000001000000
..........................................................................................................................................................CGCAGTATACTTTTGTGTTT.............................................................................................................20143.00430040021000000011000210000023330000121002000000000000000000001200000024300200000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGAA..................................................................24137.0037001000000000000000000000000000000000000000000000000000000000000191700000000000000
..........................................................................................................................................................CGCAGTATACTTTTGTGT...............................................................................................................18136.00360010429000100000000000091100100001000041000000000000000000010000000000000000000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGA...................................................................22134.003400150000000000100000000000021000000000000000000000000000000000033900000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGTT..................................................................24133.003300100000000000000000000000000000000000000000000000000000000000720500000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGC.......................................................................19228.005673909000000000000000000000000000000000000000000000000000000000000100000000000000
......................................................................................................................................................................................................CAGGATTATACTGTGAG....................................................................17127.00270000000000000000000000000000000000000000000000000000000000000010057400000090001
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGC...................................................................23125.00250060000000000014000001201020200000000000000000000000000000000042000000000000000
.....................................................................................................................................................................................................ACAGGATTATACTGTGAGT...................................................................19125.002500000000000000000000001001010000100101000000000000000000000000014400001000000000
..........................................................................................................................................................CGCAGTATACTTTTGTGTTTG............................................................................................................21125.00250010000000100000000000021141110100110000000000000000000000000001000002104100000
..................................................................................................................................................................................................ATCACAGGATTATACTGTG......................................................................19124.002400240000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................CAGTATACTTTTGTGTTTTG...........................................................................................................20121.00210090000010000000000000000021000100003000000000000000000000000000300000100000000
.................................................................................................................................................................................................AATCACAGGATTATACTC........................................................................18220.00406800000000000000000000000000000000000000011000000011000000000000000042443500000
..........................................................................................................................................................CGCAGTATACTTTTGTGTTTTGAA.........................................................................................................24120.00200010100000000000000000000120000000162220000000000000000000000000001000000000001
.............................................................................................................................................................AGTATACTTTTGTGTTTTG...........................................................................................................19118.00180071001100000000000000002000000000001000000000000000000000001002200000000000000
.......................................................................................................................................................................................................................TTATCGGCTGTAG---CAACAAC.............................................20117.00170000000000000000000000000000000000000000000000000000000000000000010063006100000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................21117.00174220000000000000000000000000000000001000000000000001000000000010100010001300000
..........................................................................................................................................................CGCAGTATACTTTTGTGTT..............................................................................................................19116.00160051000000000010010000110010010000100100000000000000000000020000000000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGTTT.................................................................25116.001600000000000000000000000000000000000000000000000000000000000000412000000000000000
...........................................................................................................................................................GCAGTATACTTTTGTGTTTT............................................................................................................20116.00160090010000000000010000000001000101002000000000000000000000000000000000000000000
.....................................................................................................................................................................................................ACAGGATTATACTGTGA.....................................................................17114.001400000000000000000000000000000000000000000000000000000000000010001201000000000000
..........................................................................................................................................................CGCAGTATACTTTTGTGTTTTGAAA........................................................................................................25114.00140000000000002200000000000010000010001000000000000000000000020001001100000000011
....................................................................................................................................................................................................CACAGGATTATACTGTGAG....................................................................19114.00140050000000000000300000004101000000000000000000000000000000000000000000000000000
..........................................................................................................................................................CGCAGTATACTTTTGTGTTTTA...........................................................................................................22114.00140000100000000010000000011012010000100000000000000000000000010001000001020000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................21114.00140000000000000011010100000110100000000001000000000000000000003030000000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGTC..................................................................24114.00140000000000000010000100100000000000000001000000000000000000000142300000000000000
..........................................................................................................................................................CGCAGTATACTTTTGTGTTTTGTC.........................................................................................................24113.00130000000000000000000000000000010200000020000000000000000000000040000011000200000
..........................................................................................................................................................CGCAGTATACTTTTGTGTTTTAA..........................................................................................................23111.00110000000000000000000000000020010020201000000000000000000000000003000000000000000
..................................................................................................................................................................................................ATCACAGGATTATACTGT.......................................................................18111.001100110000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TCACAGGATTATACTGTGA.....................................................................19111.001100100000000000000000000000000000000000000000000000000000000000010000000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTCC.....................................................................21111.00110040000000000000000010010001100100000010000000000000000000000000000000000000001
.......................................................................................................................AGCC------------AA--CGCA-TTCGATGTCT.................................................................................................................................20110.00100000000000000000000000001032000000000000000000000000000000000000000000103000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGTA..................................................................24110.00100010000000000000000000000010000000000000000000000000000000000006200000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTA......................................................................20110.00100110000000000000000000000001000010001100000000000000000000000000000000000400000
...................................................................................................................................................................................................TCACAGGATTATACTGTGAG....................................................................2019.0090050000000000000000000000000000000000000000000000000000000000040000000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGC.....................................................................2119.0090000000000000000010002110000000000000001000000000000000000000030000000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGA.......................................................................1919.0090020001000000000000000000010000010001001000000000000000000000000001000000010000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................2219.0090060000000000000000000000021000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................ACAGGATTATACTGTGAGA...................................................................1919.0090010000000000000000000001000000000000000000000000000000000000003100100000020000
..............................................................................................................................................................................................TCAAATCACAGGATTATACTGT.......................................................................2219.0090000000000000000000100000001000000000000000000000000000000000000000020010400000
......................................................................................................................................................................................................CAGGATTATACTGTGAGA...................................................................1818.0081001000000000000001000000000000000010000000000000000000000000000012100000000000
..........................................................................................................................................................CGCAGTATACTTTTGTGTTTTGC..........................................................................................................2317.0070030100000000000000000010000000000000000000000000000000000000002000000000000000
.........................................................TTG-------------------------------------------------T---------AGCC------------AA--CGCA-TTCGATGTCT.................................................................................................................................2417.0070000001000000000000000000000000000000000000000100000000000000000100000202000000
..............................................................................................................................................................................................TCAAATCACAGGATTATACTG........................................................................2117.0070100000000000000000000000000001000000000000000000000000000000000002012000000000
....................................................................................................................................................................................................CACAGGATTATACTGTGA.....................................................................1817.0070120000000000000000000000000000000000000000000000000000000000000000003000100000
.........................................................................................................................................................TCGCAGTATACTTTTGTGTTT.............................................................................................................2117.0070000020000000000000000000010012100000000000000000000000000000000000000000000000
..........................................................................................................................................................CGCAGTATACTTTTGTGTTTTCC..........................................................................................................2315.0050000000000000000000100000000011000000000000000000000000000001100000000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTT......................................................................2015.0050010000000000010101000000000000000000000000000000000000000001000000000000000000
................................................................................................................................................................................................AAATCACAGGATTATACTGTG......................................................................2115.0050050000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAAG...................................................................2314.0040000000000000000000000000010000000000000000000000000000000000003000000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGTTA.................................................................2514.0040000000000000000000000000000000000000000000000000000000000000003100000000000000
..........................................................................................................................................................CGCAGTATACTTTTGTGTTTTGTT.........................................................................................................2414.0040000000000000000000000001001001000000000000000000000000000000010000000000000000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAA....................................................................2114.0040040000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................ACAGGATTATACTGTGAA....................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000400000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGTCCA................................................................2614.0040000000000000000000000000000000000000000000000000000000000000040000000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGTCT.................................................................2514.0040000000000000000000000000000000000000000000000000000000000000004000000000000000
................................................................................................................................................................................................AAATCACAGGATTATACTGTGAGT...................................................................2414.0040000000000000000000000001001000010000000000000000000000000000010000000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGTTAAA...............................................................2714.0040000000000000000000000000000000000000000000000000000000000000004000000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGCA..................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000400000000000000
.....................................................................................................................................................................................................ACAGGATTATACTGTGAAA...................................................................1923.5070000000000000001000000000000000000000000000000000000000000000004200000000000000
.........................................................................................................................................................TCGCAGTATACTTTTGTGTTTTC...........................................................................................................2313.0030000000000000000000000000010000000000000000000000000000000000000200000000000000
................................................................................................................................................................................................AAATCACAGGATTATACTGTGAA....................................................................2313.0030000000000000000000000000000000000000000000000000000000000000003000000000000000
.......................................................................................................................................................................................................AGGATTATACTGTGAG....................................................................1613.0030000000000000000000000000000000000000000000000000000000030000000000000000000000
.........................................................................................................................................................TCGCAGTATACTTTTGTGTTTTT...........................................................................................................2313.0030000000000000000000001000001000000000010000000000000000000000000000000000000000
..........................................................................................................................................................CGCAGTATACTTTTGTGTTTTTG..........................................................................................................2313.0030000000000000000000000000000001000000000000000000000000000000000000001100000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGGA..................................................................2413.0030000000000000000000000000000000000000000000000000000000000000001200000000000000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGC...................................................................2213.0030001000000000000000000000000000000020000000000000000000000000000000000000000000
...................................................................................................................................................................................................TCACAGGATTATACT.........................................................................1513.0030000000000000000000000000000000000000000000000000000000111000000000000000000000
...........................................................................................................................................................GCAGTATACTTTTGTGTTTTC...........................................................................................................2113.0030020000000000000000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGTTAA................................................................2613.0030000000000000000000000000000000000000000000000000000000000000002100000000000000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAC....................................................................2213.0030020000000000000010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................AGGATTATACTGTGAGA...................................................................1722.5050000000000000000000000000000000000000000000000000000000000000000000100000030001
..........................................................TG-------------------------------------------------T---------AGCC------------AA--CGCA-TTCGATGT...................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000200000000000000
................................................................................................................................................................................................AAATCACAGGATTATACTGTGAGA...................................................................2412.0020010000000000000000000000000000000000000000000000000000000000001000000000000000
.........................................................................................................................................................TCGCAGTATACTTTTGTGTTTTAA..........................................................................................................2412.0020000000000000000000000000000000000001000000000000000000000010000000000000000000
...................................................................................................................................................................................................TCACAGGATTATACTGTGAGA...................................................................2112.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
TA---TTC-------------------------TAAATTTGTTAAG---ATTTTAATTTG------------------------------------------------AATTAT------TTG------------AA--CACA-TTCGATGTCTCGCAGTATATTTTTGTGTTTTGTTTA-TTATAAAAATCAAATCACAGGATTATACTGTGAGTTATCGGCTGAAA---CAACAACAAAT--TGAATTAAAAT---------------------CA---TCSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.................................................................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................2115405.005405260416381116241526
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTG...........................................................................................................2211392.00139225338811916753412
.................................................................................................................................................................................................AATCACAGGATTATACTGT.......................................................................191950.00950667484942081
.................................................................................................................................................................................................AATCACAGGATTATACTGTG......................................................................201201.0020118237090
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................221179.00179136213352
..................................................................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................201127.0012712500020
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTT...........................................................................................................22151.005102123700
..................................................................................................................................................................................................ATCACAGGATTATACTGT.......................................................................18140.00404000000
................................................................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................22137.00378000290
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTG...........................................................................................................21132.00322420015
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAA....................................................................22127.00272200050
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGC...................................................................23126.00262400020
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTT............................................................................................................21120.0020485111
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................22118.00181210050
.................................................................................................................................................................................................AATCACAGGATTATACTG........................................................................18116.00161014100
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGA...................................................................23113.0013700060
..........................................................................................................................................................CGCAGTATATTTTTGTGTTT.............................................................................................................20111.0011312014
.................................................................................................................................................................................................AATCACAGGATTATACTGC.......................................................................19110.0010001180
....................................................................................................................................................................................................CACAGGATTATACTGTGAG....................................................................1919.009900000
...................................................................................................................................................................................................TCACAGGATTATACTGTGA.....................................................................1919.009900000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGT...................................................................2318.008600110
..........................................................................................................................................................CGCAGTATATTTTTGTGTT..............................................................................................................1918.008100205
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAAA...................................................................2317.007700000
...................................................................................................................................................................................................TCACAGGATTATACTGTGAG....................................................................2017.007700000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGA...................................................................2217.007700000
..................................................................................................................................................................................................ATCACAGGATTATACTGTG......................................................................1917.007700000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGT..........................................................................................................2315.005120002
.................................................................................................................................................................................................AATCACAGGATTATACTGTGT.....................................................................2115.005101210
.....................................................................................................................................................................................................ACAGGATTATACTGTGAG....................................................................1815.005500000
............................................................................................................................................................CAGTATATTTTTGTGTTTTG...........................................................................................................2014.004300010
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................2214.004400000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................2114.004400000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGC.....................................................................2114.004120100
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAC....................................................................2214.004000040
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGC..........................................................................................................2314.004300001
.................................................................................................................................................................................................AATCACAGGATTATACTGA.......................................................................1914.004400000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGG.....................................................................2113.003100020
..........................................................................................................................................................CGCAGTATATTTTTGTGT...............................................................................................................1813.003001101
....................................................................................................................................................................................................CACAGGATTATACTGTGA.....................................................................1813.003300000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTC............................................................................................................2113.003110001
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTCC...........................................................................................................2213.003000012
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGA..........................................................................................................2312.002100001
.................................................................................................................................................................................................AATCACAGGATTATACTCC.......................................................................1912.002200000
.............................................................................................................................................................................................ATCAAATCACAGGATTATACTGTGA.....................................................................2512.002000020
.................................................................................................................................................................................................AATCACAGGATTATACTGG.......................................................................1912.002001100
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGC...................................................................2212.002200000
.........................................................................................................................................................TCGCAGTATATTTTTGTGTTTT............................................................................................................2212.002101000
.....................................................................................................................................................................................................ACAGGATTATACTGTGAGA...................................................................1912.002200000
.................................................................................................................................................................................................AATCACAGGATTATACTGTA......................................................................2012.002100010
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGTC.........................................................................................................2412.002000002
..............................................................................................................................................................GTATATTTTTGTGTTTTG...........................................................................................................1812.002100001
...................................................................................................................................................................................................TCACAGGATTATACTGTGAGA...................................................................2112.002100010
...............................................................................................................................................................................................CAAATCACAGGATTATACTGTGA.....................................................................2311.001000010
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTC...........................................................................................................2111.001100000
...........................................................................................................................................................GCAGTATATTTTTGTGTTT.............................................................................................................1911.001100000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGTC..................................................................2411.001100000
.............................................................................................................................................................................................ATCAAATCACAGGATTATACTGTGG.....................................................................2511.001000010
.......................................................................................................................................................................................................AGGATTATACTGTGAGTT..................................................................1811.001100000
........................................................................................................................TTG------------AA--CACA-TTCGATGTCT.................................................................................................................................1911.001000010
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTA...........................................................................................................2211.001010000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTC...........................................................................................................2211.001100000
...................................................................................................................................................................................................TCACAGGATTATACTGTG......................................................................1811.001100000
.................................................................................................................T------TTG------------AA--CACA-TTCGATGTCT.................................................................................................................................2011.001000010
.................................................................................................................................................................................................AATCACAGGATTATACTAC.......................................................................1921.002000020
...................................................................................................................................................................................................TCACAGGATTATACTGTGAGT...................................................................2111.001100000
.................................................................................................................................................................................................AATCACAGGATTATACTA........................................................................1811.001100000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGTA....................................................................2211.001001000
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAGCC..................................................................2411.001100000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGG..........................................................................................................2311.001100000
................................................................................................................................................................................................AAATCACAGGATTATACTGTGAG....................................................................2311.001100000
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTGTTT........................................................................................................2411.001100000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGCC.........................................................................................................2411.001010000
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGAA..................................................................2311.001100000
.................................................................................................................................................................................................AATCACAGGATTATACTGTT......................................................................2011.001000100
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAAAA..................................................................2411.001100000
.........................................................................................................................TG------------AA--CACA-TTCGATGTCT.................................................................................................................................1811.001000010
.........................................................................................................................................................TCGCAGTATATTTTTGTGTTTTG...........................................................................................................2311.001100000
..........................................................................................................................................................CGCAGTATATTTTTGTGTC..............................................................................................................1911.001000001
..........................................................................................................................................................CGCAGTATATTTTTGTGTTC.............................................................................................................2011.001000001
.................................................................................................................................................................................................AATCACAGGATTATACTTC.......................................................................1921.002100010
.........................................................................................................................................................TCGCAGTATATTTTTGTGTTT.............................................................................................................2111.001010000
......................................................................................................................................................................................................CAGGATTATACTGTGAGA...................................................................1811.001100000
......................................................................................................................................................................................................CAGGATTATACTGTGAGT...................................................................1811.001100000
............................................................................................................AATTAT------TTG------------AA--CACA-TTCGATGTCT.................................................................................................................................2511.001000010
......................................................................................................................................................................................................CAGGATTATACTGTGAGC...................................................................1811.001100000
................................................................................................................................................................................................AAATCACAGGATTATACTGT.......................................................................2011.001100000
.............................................................................................................................................................AGTATATTTTTGTGTTTTG...........................................................................................................1911.001100000
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTCC..........................................................................................................2311.001100000
....................................................................................................................................................................................................CACAGGATTATACTGTGAGA...................................................................2011.001100000
....................................................................................................................................................................................................CACAGGATTATACTGTGAC....................................................................1911.001000010
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTGTT.........................................................................................................2411.001100000
...........................................................................................................................................................GCAGTATATTTTTGTGTTTT............................................................................................................2011.001100000
droGri2
AC---ATCTA-TCAGCTATACA---------TT--AT---TTAGAAGTGTTTTCAATTTGATATACA-------TATATAGATAGAT-CTG-TTAAGCCCAC-------------------------------------CA-CTGTCGATGTCTCGCAGTATATTTTTGTGTTTTGTTTATTTTTGAAAATCAAATCACAGGATTATACTGTGAGTTATC------GC---CAGCAGCAAGGAC-----AACCAA-AT------------TTT---AA---TTSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.................................................................................................................................................................................................AATCACAGGATTATACTGTGA.....................................................................211155.001551532
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTTG...........................................................................................................221142.001426181
.................................................................................................................................................................................................AATCACAGGATTATACTGTG......................................................................20120.0020200
.................................................................................................................................................................................................AATCACAGGATTATACTGT.......................................................................19119.0019145
...........................................................................................................................................................GCAGTATATTTTTGTGTTTTG...........................................................................................................2119.00981
..................................................................................................................................................................................................ATCACAGGATTATACTGTGA.....................................................................2017.00770
..........................................................................................................................................................CGCAGTATATTTTTGTGTTTT............................................................................................................2117.00743
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAG....................................................................2213.00330
...........................................................................................................................................................GCAGTATATTTTTGTGTTTT............................................................................................................2013.00330
.................................................................................................................................................................................................AATCACAGGATTATACTG........................................................................1813.00330
.................................................................................................................................................................................................AATCACAGGATTATACTGTGAT....................................................................2221.50330
..................................................................................................................................................................................................ATCACAGGATTATACTGTG......................................................................1911.00110
.................................................................................................CCCAC-------------------------------------CA-CTGTCGATGTCT.................................................................................................................................1911.00110
.............................................................................................................................................................AGTATATTTTTGTGTTTTG...........................................................................................................1911.00110
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAG....................................................................2111.00110
................................................................................................................................................................................................AAATCACAGGATTATACTGTGA.....................................................................2211.00110
..................................................................................................................................................................................................ATCACAGGATTATACTGT.......................................................................1811.00110
.....................................................................................................................................................................................................ACAGGATTATACTGTGAG....................................................................1811.00110
..................................................................................................................................................................................................ATCACAGGATTATACTGTGAGT...................................................................2211.00110
.................................................................................................................................................................................................AATCACAGGATTATACTGTGATA...................................................................2320.50110
..............................................................................................................................................................GTATATTTTTGTGTTTTG...........................................................................................................1820.50110

Generated: 10/20/2015 at 11:21 PM