ID:

dan-mir-306

 Coordinate:

scaffold_12916:15864863-15864947 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-44.2 -43.4 -43.4

Flybase annnotation

intron [Dana\GF14005-in]; pre_miRNA [Dana\mir-306-RM]; utr5 [utr5_plus_2209]; miRNA [Dana\miR-306-RA]; CDS [Dana\GF14005-cds]

No Repeatable elements found

Sense Strand Reads

GGTAAGGATTAAATGGAAATCTATTCCGATTGGATGTGAAAGTGCCAGAAGTCCACTTGGTAGCTCAGGTACTTAGTGACTCTCAATGCATTTGACATTTTGGGAGCCACTTTGTGCCTGGGCCATCAGTGCGACTATATCTTCTATTAAAAAAATTGTTTAAAATATATGGTATATAGTGTTCT

*************************************************((((((((.(((.((((((((((..((((.(((((((.............))))))).))))..)))))))))).))))))).))))..*********************************************** 		Read size # Mismatch Hit Count Total Norm Total M044

female body

 M058

embryo

 V106

head

 V039

embryo

 V055

head

 V105

male body
................................................................TCAGGTACTTAGTGACTCTCA.................................................................................................... 21 0 1 15411.00 15411 9457 2974 614 2185 131 50
................................................................TCAGGTACTTAGTGACTCTCAA................................................................................................... 22 0 1 10973.00 10973 7735 1114 678 1248 175 23
.....................................................................................................GGGAGCCACTTTGTGCCTGGGC.............................................................. 22 0 1 3408.00 3408 255 246 2705 55 95 52
................................................................TCAGGTACTTAGTGACTCTC..................................................................................................... 20 0 1 3234.00 3234 556 2125 162 227 151 13
................................................................TCAGGTACTTAGTGACTCTCAAA.................................................................................................. 23 1 1 1146.00 1146 606 239 142 140 17 2
.................................................................CAGGTACTTAGTGACTCTCA.................................................................................................... 20 0 1 922.00 922 915 4 0 3 0 0
.................................................................CAGGTACTTAGTGACTCTCAA................................................................................................... 21 0 1 740.00 740 739 1 0 0 0 0
................................................................TCAGGTACTTAGTGACTCTCAC................................................................................................... 22 1 1 522.00 522 169 272 22 55 2 2
................................................................TCAGGTACGTAGTGACTCTCA.................................................................................................... 21 1 1 367.00 367 364 0 0 3 0 0
................................................................TCAGGTACTTAGTGACTCT...................................................................................................... 19 0 1 352.00 352 167 74 37 18 55 1
.....................................................................................................GGGAGCCACTTTGTGCCTGGG............................................................... 21 0 1 347.00 347 170 43 60 9 51 14
................................................................TCAGGTACGTAGTGACTCTCAA................................................................................................... 22 1 1 272.00 272 271 0 0 1 0 0
.....................................................................................................GGGAGCCACTTTGTGCCTGGGCT............................................................. 23 1 1 246.00 246 7 0 234 2 2 1
................................................................TCAGGTACTTAGTGACTCTCAAAA................................................................................................. 24 2 1 218.00 218 103 56 18 39 1 1
................................................................TCAGGTACTTAGTGACTCTCACC.................................................................................................. 23 2 1 164.00 164 23 125 2 13 0 1
................................................................TCAGGTACATAGTGACTCTCA.................................................................................................... 21 1 1 164.00 164 163 0 1 0 0 0
................................................................TGAGGTACTTAGTGACTCTCA.................................................................................................... 21 1 1 161.00 161 1 159 0 1 0 0
................................................................TCAGGTACATAGTGACTCTCAA................................................................................................... 22 1 1 116.00 116 116 0 0 0 0 0
................................................................TGAGGTACTTAGTGACTCTC..................................................................................................... 20 1 1 113.00 113 0 113 0 0 0 0
................................................................TCAGGTACTTAGTGACTCTCAT................................................................................................... 22 1 1 105.00 105 71 15 4 9 6 0
.....................................................................................................GGGAGCCACTTTGTGCCTGG................................................................ 20 0 1 96.00 96 50 20 18 1 4 3
................................................................TCAGGTACTTAGTGACTCTCAAC.................................................................................................. 23 1 1 91.00 91 37 43 0 11 0 0
.....................................................................................................GTGAGCCACTTTGTGCCTGGGC.............................................................. 22 1 1 81.00 81 0 64 17 0 0 0
................................................................TCAGGGACTTAGTGACTCTCA.................................................................................................... 21 1 1 78.00 78 0 33 1 39 5 0
................................................................TCAGGTACTTAGTGACTCTCAAT.................................................................................................. 23 0 1 78.00 78 48 22 4 4 0 0
..................................................................AGGTACTTAGTGACTCTCA.................................................................................................... 19 0 1 77.00 77 59 2 0 13 3 0
................................................................TCAGGTACCTAGTGACTCTCA.................................................................................................... 21 1 1 77.00 77 73 2 0 2 0 0
................................................................TCAGGTACTTAGTGACTCTCT.................................................................................................... 21 1 1 72.00 72 40 10 9 6 7 0
................................................................TCAGGTACCTAGTGACTCTCAA................................................................................................... 22 1 1 66.00 66 66 0 0 0 0 0
................................................................TCAGGTACTTAGTGACTCTCCA................................................................................................... 22 1 1 65.00 65 0 0 0 65 0 0
................................................................TCAGGTACTTAGTGACTCTCACA.................................................................................................. 23 2 1 65.00 65 15 40 0 10 0 0
.....................................................................................................GGGAGCCACTTTGTGCCTGGGCA............................................................. 23 1 1 64.00 64 3 0 56 0 3 2
.................................................................CAGGTACTTAGTGACTCTCAAA.................................................................................................. 22 1 1 60.00 60 60 0 0 0 0 0
..................................................................AGGTACTTAGTGACTCTCAA................................................................................................... 20 0 1 60.00 60 47 0 0 10 3 0
................................................................TCAGGGACTTAGTGACTCTCAA................................................................................................... 22 1 1 57.00 57 0 15 5 29 8 0
................................................................TGAGGTACTTAGTGACTCTCAA................................................................................................... 22 1 1 53.00 53 0 51 1 1 0 0
.....................................................................................................GGGAGCCACTTTGTGCCTGGGT.............................................................. 22 1 1 51.00 51 10 7 25 0 0 9
.....................................................................................................GGTAGCCACTTTGTGCCTGGGC.............................................................. 22 1 1 50.00 50 1 0 49 0 0 0
................................................................TCAGGTACTTAGTTACTCTCA.................................................................................................... 21 1 1 50.00 50 10 2 3 34 1 0
................................................................TCAGGTACTTAGTGACTCTCC.................................................................................................... 21 1 1 50.00 50 2 6 3 37 1 1
.................................................................CAGGTACTTAGTGACTCTC..................................................................................................... 19 0 1 49.00 49 49 0 0 0 0 0
......................................................................................................GGAGCCACTTTGTGCCTGGGC.............................................................. 21 0 1 46.00 46 21 1 22 2 0 0
................................................................TCAGGTACTTAGTGACTCTCAAAAA................................................................................................ 25 3 1 40.00 40 18 10 1 11 0 0
.....................................................................................................GGGAGCCACTTTGTGCCTGGTC.............................................................. 22 1 1 39.00 39 0 1 34 1 1 2
.....................................................................................................GGGAGCCACTTTGTGCCTGGGA.............................................................. 22 1 1 39.00 39 2 3 30 1 1 2
...................................................................................................TTGGGAGCCACTTTGTGCCTGG................................................................ 22 0 1 39.00 39 8 21 2 8 0 0
................................................................GCAGGTACTTAGTGACTCTCA.................................................................................................... 21 1 1 36.00 36 26 6 0 3 1 0
.................................................................CAGGTACTGAGTGACTCTCA.................................................................................................... 20 1 1 36.00 36 36 0 0 0 0 0
................................................................TCAGGTACGTAGTGACTCTCAAA.................................................................................................. 23 2 1 34.00 34 33 1 0 0 0 0
.....................................................................................................GGGAGCCACTTTGTGCCTGGAC.............................................................. 22 1 1 34.00 34 0 9 24 0 1 0
................................................................TCAGGTACTTAGTGACTCTCAAG.................................................................................................. 23 1 1 34.00 34 23 5 5 1 0 0
................................................................TCAGGTACTTCGTGACTCTCA.................................................................................................... 21 1 1 34.00 34 1 30 0 3 0 0
................................................................TCAGGCACTTAGTGACTCTCA.................................................................................................... 21 1 1 34.00 34 6 6 0 19 3 0
.....................................................................................................GGGAGCCACTTTGTTCCTGGGC.............................................................. 22 1 1 33.00 33 0 0 30 1 1 1
................................................................TCAGGTACTTAGTGACTCTCAG................................................................................................... 22 1 1 33.00 33 30 0 2 1 0 0
................................................................TCATGTACTTAGTGACTCTCA.................................................................................................... 21 1 1 32.00 32 3 12 2 15 0 0
................................................................TCAGGGACTTAGTGACTCTC..................................................................................................... 20 1 1 31.00 31 0 21 1 2 7 0
................................................................TCAGGTACTTAGTGACTCTCACT.................................................................................................. 23 1 1 31.00 31 7 13 1 9 1 0
.................................................................CAGGTACTGAGTGACTCTCAA................................................................................................... 21 1 1 30.00 30 30 0 0 0 0 0
................................................................TCAGGTACGTAGTGACTCTC..................................................................................................... 20 1 1 29.00 29 26 2 0 0 1 0
................................................................TCAGGTACTTAGTGACTCTCACCA................................................................................................. 24 3 1 28.00 28 3 24 0 1 0 0
................................................................TCAGGTACTTAGTGACTCC...................................................................................................... 19 1 1 28.00 28 0 28 0 0 0 0
................................................................TCAGGTACTTAGCGACTCTCA.................................................................................................... 21 1 1 28.00 28 6 11 0 9 2 0
................................................................TCAGGTACTTAGTTACTCTCAA................................................................................................... 22 1 1 27.00 27 10 3 2 11 1 0
................................................................TCAGGTACTTAGTGACTCTCATT.................................................................................................. 23 1 1 26.00 26 22 2 1 0 0 1
................................................................GCAGGTACTTAGTGACTCTCAA................................................................................................... 22 1 1 24.00 24 20 4 0 0 0 0
.....................................................................................................GGGAGCCACTTTGTGCCTGGGCC............................................................. 23 0 1 23.00 23 2 1 13 2 5 0
................................................................CCAGGTACTTAGTGACTCTCA.................................................................................................... 21 1 1 22.00 22 11 9 1 1 0 0
......................................................................................................GGAGCCACTTTGTGCCTGGG............................................................... 20 0 1 22.00 22 22 0 0 0 0 0
................................................................TTAGGTACTTAGTGACTCTCA.................................................................................................... 21 1 1 21.00 21 0 18 0 2 1 0
................................................................TCAGGTACTTAGTGACTCTCG.................................................................................................... 21 1 1 21.00 21 4 3 4 5 4 1
................................................................CCAGGTACTTAGTGACTCTCAA................................................................................................... 22 1 1 21.00 21 8 3 0 9 1 0
.....................................................................................................GGGATCCACTTTGTGCCTGGGC.............................................................. 22 1 1 20.00 20 0 1 19 0 0 0
.................................................................CAGGTACTAAGTGACTCTCA.................................................................................................... 20 1 1 19.00 19 19 0 0 0 0 0
................................................................TCATGTACTTAGTGACTCTCAA................................................................................................... 22 1 1 19.00 19 5 9 2 3 0 0
................................................................ACAGGTACTTAGTGACTCTCA.................................................................................................... 21 1 1 19.00 19 13 4 0 1 1 0
................................................................TTAGGTACTTAGTGACTCTCAA................................................................................................... 22 1 1 19.00 19 2 13 0 3 1 0
.....................................................................................................GGGAGACACTTTGTGCCTGGGC.............................................................. 22 1 1 19.00 19 0 1 18 0 0 0
................................................................TCAGGTACTTAGCGACTCTCAA................................................................................................... 22 1 1 18.00 18 5 5 2 6 0 0
................................................................TCGGGTACTTAGTGACTCTCAA................................................................................................... 22 1 1 18.00 18 10 3 3 2 0 0
................................................................TCAGGTACTTAGTGCCTCTCA.................................................................................................... 21 1 1 18.00 18 0 14 1 3 0 0
................................................................TCAGGTACTTAGTGGCTCTCA.................................................................................................... 21 1 1 18.00 18 12 3 0 3 0 0
................................................................TCAGGTACTTCGTGACTCTC..................................................................................................... 20 1 1 18.00 18 0 17 0 1 0 0
................................................................TCAGGTACTTCGTGACTCTCAA................................................................................................... 22 1 1 18.00 18 0 11 1 6 0 0
...............................................................CTCAGGTACTTAGTGACTCTCA.................................................................................................... 22 0 1 17.00 17 8 4 0 5 0 0
................................................................TCAGGCACTTAGTGACTCTCAA................................................................................................... 22 1 1 17.00 17 3 3 1 7 3 0
................................................................TCAGGTACTTAGTGACTCCCA.................................................................................................... 21 1 1 17.00 17 10 5 0 2 0 0
................................................................TCAGTTACTTAGTGACTCTCA.................................................................................................... 21 1 1 17.00 17 3 6 0 8 0 0
................................................................TCAGTTACTTAGTGACTCTCAA................................................................................................... 22 1 1 17.00 17 13 1 1 2 0 0
................................................................TCAGGTACTTAGGGACTCTCA.................................................................................................... 21 1 1 16.00 16 10 1 1 3 1 0
................................................................TCAGGTACTTATTGACTCTCA.................................................................................................... 21 1 1 16.00 16 1 1 2 12 0 0
................................................................TCAGGTACTTAGTCACTCTCAA................................................................................................... 22 1 1 16.00 16 11 0 1 4 0 0
................................................................TCAGGTAATTAGTGACTCTCA.................................................................................................... 21 1 1 16.00 16 0 14 0 2 0 0
................................................................TCATGTACTTAGTGACTCTC..................................................................................................... 20 1 1 16.00 16 0 16 0 0 0 0
................................................................TTAGGTACTTAGTGACTCTC..................................................................................................... 20 1 1 15.00 15 0 13 0 2 0 0
................................................................TCAGGAACTTAGTGACTCTCA.................................................................................................... 21 1 1 15.00 15 2 1 0 10 2 0
......................................................................................................GGAGCCACTTTGTGCCTGGGCC............................................................. 22 0 1 14.00 14 5 3 5 0 1 0
.....................................................................................................GGGAGCCACTTTGTGCCTGGT............................................................... 21 1 1 14.00 14 5 2 5 0 1 1
................................................................TCAGGTAATTAGTGACTCTC..................................................................................................... 20 1 1 14.00 14 0 12 1 0 1 0
................................................................TCAGGTACTTAGTCACTCTCA.................................................................................................... 21 1 1 14.00 14 2 0 0 12 0 0
................................................................TGAGGTACTTAGTGACTCTCAC................................................................................................... 22 2 1 13.00 13 0 13 0 0 0 0
.....................................................................................................GTGAGCCACTTTGTGCCTGGG............................................................... 21 1 1 13.00 13 1 11 1 0 0 0
...................................................................................................TTGGGAGCCACTTTGTGCCTGGG............................................................... 23 0 1 13.00 13 3 3 5 2 0 0
................................................................TCAGGTACTTAGTGACTCTCAACA................................................................................................. 24 2 1 13.00 13 2 10 0 1 0 0
................................................................TCAGGTACTTACTGACTCTCA.................................................................................................... 21 1 1 13.00 13 5 2 0 5 0 1
.....................................................................................................TGGAGCCACTTTGTGCCTGGGC.............................................................. 22 1 1 13.00 13 0 0 13 0 0 0
.....................................................................................................GGGTGCCACTTTGTGCCTGGGC.............................................................. 22 1 1 13.00 13 0 12 1 0 0 0
.................................................................CAGGTACTTAGTGACTCT...................................................................................................... 18 0 1 13.00 13 13 0 0 0 0 0
................................................................TCAGGTACTTACTGACTCTCAA................................................................................................... 22 1 1 13.00 13 2 5 0 6 0 0
................................................................TCAGGTACTTAGTGATTCTC..................................................................................................... 20 1 1 12.00 12 0 10 0 0 2 0
.....................................................................................................GGGAGCCACTTTGTGCCTGGGTT............................................................. 23 2 1 12.00 12 3 0 8 0 1 0
................................................................TCAGGTGCTTAGTGACTCTCA.................................................................................................... 21 1 1 12.00 12 5 3 1 3 0 0
................................................................TCAGGTACTTAGTGACTC....................................................................................................... 18 0 1 12.00 12 4 5 0 1 2 0
.....................................................................................................GGGAGCCACTTTGTGCCTGGGCTT............................................................ 24 2 1 11.00 11 1 1 9 0 0 0
.................................................................CAGGTACTAAGTGACTCTCAA................................................................................................... 21 1 1 11.00 11 11 0 0 0 0 0
................................................................TCAGGTACTTAGTGACCCTCA.................................................................................................... 21 1 1 11.00 11 4 0 0 7 0 0
................................................................TCAGGTACTTAGTGACTCTTA.................................................................................................... 21 1 1 11.00 11 3 5 1 2 0 0
................................................................TCAGGTACCTAGTGACTCTC..................................................................................................... 20 1 1 11.00 11 5 6 0 0 0 0
.................................................................CAGGTACTTAGTGACTCTCAC................................................................................................... 21 1 1 11.00 11 10 1 0 0 0 0
................................................................TCAGGTACTTAGTGGCTCTCAA................................................................................................... 22 1 1 11.00 11 6 1 3 1 0 0
................................................................TCAGGTACTTAGTGACTCTCGA................................................................................................... 22 1 1 11.00 11 5 2 3 1 0 0
.................................................................CAGGTACTTAGTGACTCTCAAT.................................................................................................. 22 0 1 10.00 10 10 0 0 0 0 0
................................................................TCAGGTACTTAGCGACTCTC..................................................................................................... 20 1 1 10.00 10 2 3 0 3 2 0
................................................................ACAGGTACTTAGTGACTCTCAA................................................................................................... 22 1 1 10.00 10 8 1 0 1 0 0
.....................................................................................................GGCAGCCACTTTGTGCCTGGGC.............................................................. 22 1 1 10.00 10 0 7 3 0 0 0
.....................................................................................................GGGAGCCACTTTGTGCCTGGGG.............................................................. 22 1 1 10.00 10 0 0 3 3 4 0
................................................................TCAGGTACTTAGTGACTCTCAATT................................................................................................. 24 1 1 10.00 10 6 3 0 0 0 1
................................................................TCAGGTACTTAGTGACTCTCAAAT................................................................................................. 24 2 1 10.00 10 9 0 0 1 0 0
...................................................................GGTACTTAGTGACTCTCA.................................................................................................... 18 0 1 10.00 10 10 0 0 0 0 0
.....................................................................................................GGGAGCAACTTTGTGCCTGGGC.............................................................. 22 1 1 10.00 10 0 0 10 0 0 0
.....................................................................................................GGGAGCCACTTTGTGCCTGGCC.............................................................. 22 1 1 10.00 10 0 0 9 0 1 0
................................................................TCAGGTACGTAGTGACTCTCAC................................................................................................... 22 2 1 10.00 10 10 0 0 0 0 0
................................................................TCAGGTACTTAGAGACTCTCAA................................................................................................... 22 1 1 10.00 10 6 3 1 0 0 0
.....................................................................................................GGGAGCCACTTTGTGCCTTGGC.............................................................. 22 1 1 10.00 10 0 0 7 3 0 0
..................................................................AGGTACTTAGTGACTCTC..................................................................................................... 18 0 1 10.00 10 6 1 0 3 0 0
................................................................TCAGGTACATAGTGACTCTCAAA.................................................................................................. 23 2 1 10.00 10 10 0 0 0 0 0
................................................................TCAGCTACTTAGTGACTCTCA.................................................................................................... 21 1 1 10.00 10 3 0 0 7 0 0
.....................................................................................................GGGAGCCAGTTTGTGCCTGGGC.............................................................. 22 1 1 10.00 10 9 0 1 0 0 0
................................................................TCAGGTACTTAGTGACTATCA.................................................................................................... 21 1 1 9.00 9 0 0 2 7 0 0
................................................................TCAGGTACTTAGTGATTCTCA.................................................................................................... 21 1 1 9.00 9 0 9 0 0 0 0
................................................................TCAGGTACTTAGTGACCCTCAA................................................................................................... 22 1 1 9.00 9 5 1 0 3 0 0
................................................................TCACGTACTTAGTGACTCTCA.................................................................................................... 21 1 1 9.00 9 5 0 1 3 0 0
.....................................................................................................GGGAGCCACTTTGTGCCTG................................................................. 19 0 1 9.00 9 7 0 0 0 2 0
................................................................TCAGGCACTTAGTGACTCTC..................................................................................................... 20 1 1 9.00 9 1 6 0 0 2 0
................................................................TAAGGTACTTAGTGACTCTCAA................................................................................................... 22 1 1 9.00 9 1 0 6 2 0 0
................................................................TCAGATACTTAGTGACTCTCA.................................................................................................... 21 1 1 9.00 9 1 0 1 7 0 0
................................................................TAAGGTACTTAGTGACTCTCA.................................................................................................... 21 1 1 9.00 9 2 1 2 2 2 0
................................................................TCAGGTACTTAGGGACTCTCAA................................................................................................... 22 1 1 8.00 8 3 1 2 0 2 0
................................................................TGAGGTACTTAGTGACTCTCAAA.................................................................................................. 23 2 1 8.00 8 0 7 0 1 0 0
.....................................................................................................GTGAGCCACTTTGTGCCTGG................................................................ 20 1 1 8.00 8 0 8 0 0 0 0
.................................................................CAGGTACTTAGTGACTCTCAAAA................................................................................................. 23 2 1 8.00 8 8 0 0 0 0 0
...............................................................CTCAGGTACTTAGTGACTCTCAA................................................................................................... 23 0 1 8.00 8 5 1 0 2 0 0
............................................CCAGAAGTCCACTTGGTAGC......................................................................................................................... 20 0 1 8.00 8 0 2 3 2 1 0
................................................................TCAGGTACTTAGTGACTCTA..................................................................................................... 20 1 1 8.00 8 5 1 2 0 0 0
................................................................TCAGGTACTTAGTGACTCCCAA................................................................................................... 22 1 1 8.00 8 5 1 2 0 0 0
................................................................TCAGGTACTTGGTGACTCTCA.................................................................................................... 21 1 1 8.00 8 0 4 0 3 1 0
................................................................TCAGGTACTCAGTGACTCTCA.................................................................................................... 21 1 1 8.00 8 3 1 1 3 0 0
................................................................TCAGGTACTTAGTGACTCTCATA.................................................................................................. 23 2 1 8.00 8 3 2 2 1 0 0
................................................................TCAGGTACTTAGAGACTCTCA.................................................................................................... 21 1 1 8.00 8 1 5 2 0 0 0
................................................................TCAGGAACTTAGTGACTCTCAA................................................................................................... 22 1 1 8.00 8 1 0 1 4 2 0
......................................................................................................GGAGCCACTTTGTGCCTGG................................................................ 19 0 1 8.00 8 6 2 0 0 0 0
......................................................................................................GGAGCCACTTTGTGCCTGGGCT............................................................. 22 1 1 8.00 8 0 2 6 0 0 0
................................................................TCAGGTACTTAGTGCCTCTCAA................................................................................................... 22 1 1 8.00 8 0 1 0 7 0 0
................................................................TCATGTACTTAGTGACTCTCAAA.................................................................................................. 23 2 1 7.00 7 0 4 1 2 0 0
................................................................CCAGGTACTTAGTGACTCTC..................................................................................................... 20 1 1 7.00 7 0 7 0 0 0 0
................................................................TCAGGTACTTAGTGACTCTT..................................................................................................... 20 1 1 7.00 7 2 4 0 0 1 0
................................................................TCGGGTACTTAGTGACTCTCA.................................................................................................... 21 1 1 7.00 7 1 2 0 4 0 0
................................................................TCAGGTACTTAGTGCCTCTC..................................................................................................... 20 1 1 7.00 7 0 7 0 0 0 0
................................................................TCAGGTACTTAGTGATTCTCAA................................................................................................... 22 1 1 7.00 7 0 3 2 1 1 0
.....................................................................................................GGGAGCCACCTTGTGCCTGGGC.............................................................. 22 1 1 7.00 7 0 0 7 0 0 0
.................................................................CAGGTACTCAGTGACTCTCA.................................................................................................... 20 1 1 7.00 7 7 0 0 0 0 0
...............................................................CTCAGGTACTTAGTGACTCTC..................................................................................................... 21 0 1 7.00 7 2 4 0 0 1 0
................................................................TCAGGAACTTAGTGACTCTC..................................................................................................... 20 1 1 7.00 7 0 3 0 1 3 0
................................................................TCAGGTACTTAGTGACTCTCAAAC................................................................................................. 24 2 1 7.00 7 6 0 0 1 0 0
................................................................TCAGGTACTTAGTGACTCTAA.................................................................................................... 21 1 1 7.00 7 3 0 1 3 0 0
.................................................................CAGGTACTTAGTGACTCTCAT................................................................................................... 21 1 1 7.00 7 7 0 0 0 0 0
......................................................................................................GGAGCCACTTTGTGCCTGGGCA............................................................. 22 1 1 7.00 7 0 0 5 2 0 0
................................................................GCAGGTACTTAGTGACTCTC..................................................................................................... 20 1 1 7.00 7 0 6 0 1 0 0
................................................................TCAGGTACTTAGTGAATCTCA.................................................................................................... 21 1 1 7.00 7 1 0 0 5 1 0
................................................................TCCGGTACTTAGTGACTCTCA.................................................................................................... 21 1 1 7.00 7 1 2 0 3 0 1
...............................................................TTCAGGTACTTAGTGACTCTCAA................................................................................................... 23 1 1 6.00 6 6 0 0 0 0 0
................................................................TCAGGTACTTAGTGACTCTCACAA................................................................................................. 24 3 1 6.00 6 4 2 0 0 0 0
.................................................................CAGGTACTCAGTGACTCTCAA................................................................................................... 21 1 1 6.00 6 6 0 0 0 0 0
................................................................TCAGGTACTTAGTAACTCTCA.................................................................................................... 21 1 1 6.00 6 2 1 0 3 0 0
................................................................TCAGGTACTTAGTGACTCTTAA................................................................................................... 22 1 1 6.00 6 4 2 0 0 0 0
...............................................................ATCAGGTACTTAGTGACTCTCAA................................................................................................... 23 1 1 6.00 6 6 0 0 0 0 0
...................................................................................................TGGGGAGCCACTTTGTGCCTGG................................................................ 22 1 1 6.00 6 0 6 0 0 0 0
................................................................TCAGGTACATAGTGACTCTC..................................................................................................... 20 1 1 6.00 6 5 0 0 1 0 0
................................................................TCAGGTACTTATTGACTCTCAA................................................................................................... 22 1 1 6.00 6 1 1 0 4 0 0
.....................................................................................................GGGAGCCACTTTGTGCATGGGC.............................................................. 22 1 1 6.00 6 0 0 6 0 0 0
.....................................................................................................GGGAGCCACTTTGTGCCTGAGC.............................................................. 22 1 1 6.00 6 0 1 5 0 0 0
................................................................TCAGGTACTTAATGACTCTCA.................................................................................................... 21 1 1 6.00 6 2 1 0 3 0 0
................................................................TCAGGTAATTAGTGACTCTCAA................................................................................................... 22 1 1 6.00 6 0 5 0 0 1 0
................................................................TCAGGTACTTAGTGACTCTCAAAAAA............................................................................................... 26 3 1 6.00 6 3 3 0 0 0 0
.................................................................TCAGTACTTAGTGACTCTCAA................................................................................................... 21 3 2 5.50 11 9 2 0 0 0 0
................................................................TCAAGTACTTAGTGACTCTCA.................................................................................................... 21 1 1 5.00 5 1 2 0 1 1 0
....................................................................GTACTTAGTGACTCTCAA................................................................................................... 18 0 1 5.00 5 5 0 0 0 0 0
................................................................TCAGGTACTTAGCGACTCTCAC................................................................................................... 22 2 1 5.00 5 0 2 0 3 0 0
................................................................TCAGGTACTTAGTGACTCTCAAAG................................................................................................. 24 1 1 5.00 5 3 2 0 0 0 0
................................................................TCAGGTGCTTAGTGACTCTCAA................................................................................................... 22 1 1 5.00 5 2 0 1 2 0 0
................................................................TCAGGCACTTAGTGACTCTCAAA.................................................................................................. 23 2 1 5.00 5 0 0 1 3 1 0
................................................................TCAGGTACTTAGTGACTCTCCAA.................................................................................................. 23 2 1 5.00 5 0 0 0 5 0 0
.....................................................................................................GGTAGCCACTTTGTGCCTGGGCT............................................................. 23 2 1 5.00 5 0 0 5 0 0 0
.....................................................................................................GGGAGCCACTTTGTGCCTGGC............................................................... 21 1 1 5.00 5 0 2 3 0 0 0
.....................................................................................................GGGAGCCACTTTGTGCCTGGACT............................................................. 23 2 1 5.00 5 0 0 5 0 0 0
.....................................................................................................GGGAGCCATTTTGTGCCTGGGC.............................................................. 22 1 1 5.00 5 5 0 0 0 0 0
.....................................................................................................GGGAGCCAATTTGTGCCTGGGC.............................................................. 22 1 1 5.00 5 3 0 0 2 0 0
................................................................TCAGGTACCTAGTGACTCTCAC................................................................................................... 22 2 1 5.00 5 4 1 0 0 0 0
...................................................................GGTACTTAGTGACTCTCAA................................................................................................... 19 0 1 5.00 5 5 0 0 0 0 0
.................................................................CAGGTACTTAGTGACTCTCT.................................................................................................... 20 1 1 5.00 5 5 0 0 0 0 0
.....................................................................................................GCGAGCCACTTTGTGCCTGGGC.............................................................. 22 1 1 5.00 5 0 2 3 0 0 0
................................................................TCAGGTACTTAGTGACTCTCTA................................................................................................... 22 1 1 5.00 5 0 1 2 2 0 0
...............................................................ATCAGGTACTTAGTGACTCTCA.................................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0
................................................................TCAGGTACTTAGTTACTCTCAC................................................................................................... 22 2 1 5.00 5 1 1 0 3 0 0
.....................................................................................................GGGAGCCACTTTGTGCCTGGGTTT............................................................ 24 3 1 5.00 5 2 0 2 0 0 1
................................................................TCACGTACTTAGTGACTCTCAA................................................................................................... 22 1 1 5.00 5 1 1 0 3 0 0
.....................................................................................................GGGAGCCAGTTTGTGCCTGG................................................................ 20 1 1 5.00 5 5 0 0 0 0 0
.....................................................................................................GGGAGCCACTTTGTGCCTAGGC.............................................................. 22 1 1 5.00 5 0 0 5 0 0 0
.............................................CAGAAGTCCACTTGGTAGC......................................................................................................................... 19 0 1 5.00 5 0 4 1 0 0 0
................................................................TCAGGTACTTACTCACTCTCA.................................................................................................... 21 2 1 4.00 4 0 0 0 4 0 0
.....................................................................................................GAGAGCCACTTTGTGCCTGGGC.............................................................. 22 1 1 4.00 4 0 2 1 0 0 1
.....................................................................................................GGGAGCCACTTCGTGCCTGGGC.............................................................. 22 1 1 4.00 4 0 0 3 0 0 1
................................................................TCAGGTACTTAGTGACTTTCA.................................................................................................... 21 1 1 4.00 4 0 2 1 0 1 0
.................................................................CAGGTACTTAGTGACTCTCAAC.................................................................................................. 22 1 1 4.00 4 4 0 0 0 0 0
.................................................................CAGGTACTTAGTGACTCTCACA.................................................................................................. 22 2 1 4.00 4 3 1 0 0 0 0
................................................................TCAGGGACTTAGTGACTCTCAAA.................................................................................................. 23 2 1 4.00 4 0 2 0 2 0 0
................................................................TCAGGTACTTAGAGACTCTC..................................................................................................... 20 1 1 4.00 4 0 4 0 0 0 0
.....................................................................................................GGGAGCCACTTTGTGCCTGGGTA............................................................. 23 2 1 4.00 4 0 1 2 0 1 0
................................................................TCAGGGACTTAGTGACTCTCCA................................................................................................... 22 2 1 4.00 4 0 0 0 3 1 0
.....................................................................................................GGGAGCCAGTTTGTGCCTGGG............................................................... 21 1 1 4.00 4 4 0 0 0 0 0
................................................................TCAGGTACTTAGTGACGCTCA.................................................................................................... 21 1 1 4.00 4 1 1 0 1 1 0
................................................................TCAGGTACGTAGGGACTCTCAA................................................................................................... 22 2 1 4.00 4 4 0 0 0 0 0
....................................................................................................TGGGAGCCACTTTGTGCCTGGGC.............................................................. 23 0 1 4.00 4 2 0 2 0 0 0
................................................................TCAGGTACTTAATGACTCTCAA................................................................................................... 22 1 1 4.00 4 3 0 0 1 0 0
................................................................TCAGGTACTTAGTGACTATCAA................................................................................................... 22 1 1 4.00 4 0 0 3 1 0 0
................................................................TCAGGTACTTAGTGACTCTGAA................................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0
.....................................................................................................GGGAGCCACTTTGTCCCTGGGC.............................................................. 22 1 1 4.00 4 0 0 2 0 2 0
................................................................TCCGGTACTTAGTGACTCTC..................................................................................................... 20 1 1 4.00 4 0 1 0 1 1 1
.................................................................CAGGTACTTAGTGACTCTCATT.................................................................................................. 22 1 1 4.00 4 4 0 0 0 0 0
.................................................................CAGGTACTTAGTGACTCTCAAG.................................................................................................. 22 1 1 4.00 4 4 0 0 0 0 0
................................................................TCAGGTACTTAGTGACTCTCAATA................................................................................................. 24 1 1 4.00 4 2 1 0 1 0 0
................................................................TCAGGTACGTAGTGACTCTCAT................................................................................................... 22 2 1 4.00 4 4 0 0 0 0 0
.....................................................................................................GGGAGCCACTTTGTGCCTGTGC.............................................................. 22 1 1 4.00 4 0 0 3 1 0 0
................................................................TCAGGTACGTAGTGACTCTCAAAA................................................................................................. 24 3 1 4.00 4 4 0 0 0 0 0
................................................................TGAGGTACTTAGTGACTCT...................................................................................................... 19 1 1 4.00 4 0 4 0 0 0 0
................................................................TCATGTACTTAGTGACTCTCAC................................................................................................... 22 2 1 4.00 4 0 4 0 0 0 0
...............................................................GTCAGGTACTTAGTGACTCTCAA................................................................................................... 23 1 1 4.00 4 4 0 0 0 0 0
................................................................TGAGGTACTTAGTGACTCTCAAC.................................................................................................. 23 2 1 4.00 4 0 4 0 0 0 0
.....................................................................................................GGGAGCCACTCTGTGCCTGGGC.............................................................. 22 1 1 4.00 4 0 0 3 0 1 0
................................................................TCAGGTAATTCGTGACTCTC..................................................................................................... 20 2 1 4.00 4 0 4 0 0 0 0
................................................................TCAGGTACTTAGTTACTCTC..................................................................................................... 20 1 1 4.00 4 0 0 0 4 0 0
................................................................TCAGGAACTTAGTGACTCT...................................................................................................... 19 1 1 4.00 4 0 0 0 1 3 0
...................................................................................................TTGGGAGCCACTTTGTGCCTG................................................................. 21 0 1 4.00 4 1 3 0 0 0 0
...............................................................GTCAGGTACTTAGTGACTCTCA.................................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0
................................................................TCAGGTATTTAGTGACTCTCA.................................................................................................... 21 1 1 4.00 4 0 2 1 0 1 0
................................................................TCAGGTACTTAGTGACTCTCAATG................................................................................................. 24 0 1 4.00 4 4 0 0 0 0 0
................................................................TCAGATACTTAGTGACTCTCAA................................................................................................... 22 1 1 4.00 4 2 0 0 2 0 0
................................................................TCAGGTACGTAGGGACTCTCA.................................................................................................... 21 2 1 4.00 4 4 0 0 0 0 0
................................................................TCAGGTACGTAGTGACTCTCAG................................................................................................... 22 2 1 4.00 4 4 0 0 0 0 0
................................................................TCAGGTACATAGTGACTCTCAG................................................................................................... 22 2 1 3.00 3 3 0 0 0 0 0
................................................................TCAGGCACTTAGTGACTCTCTA................................................................................................... 22 2 1 3.00 3 0 0 0 2 1 0
.....................................................................................................GGGAGCTACTTTGTGCCTGGGCT............................................................. 23 2 1 3.00 3 0 0 3 0 0 0
.................................................................CAGGTACTTAGTGACTCTCAAAAA................................................................................................ 24 3 1 3.00 3 3 0 0 0 0 0
................................................................ACAGGTACTTAGTGACTCTCAC................................................................................................... 22 2 1 3.00 3 1 1 0 0 1 0
................................................................TCAGGTACTTAGTGACGCTC..................................................................................................... 20 1 1 3.00 3 1 2 0 0 0 0
................................................................TCAGGTACCTAGTGACTCTCAAA.................................................................................................. 23 2 1 3.00 3 2 0 0 1 0 0
................................................................TCAGGGACTTAGTGACTCTCAC................................................................................................... 22 2 2 3.00 6 0 5 0 0 1 0
................................................................TGAGGTACTTAGTGACTCTCAT................................................................................................... 22 2 1 3.00 3 0 3 0 0 0 0
.....................................................................................................GGGAGCTACTTTGTGCCTGGGC.............................................................. 22 1 1 3.00 3 0 0 3 0 0 0
................................................................GCAGGTACTTAGTGACTCTCAAA.................................................................................................. 23 2 1 3.00 3 2 1 0 0 0 0
.....................................................................................................GGGAGCCAATTTGTGCCTGGG............................................................... 21 1 1 3.00 3 3 0 0 0 0 0
.....................................................................................................GGGATCCACTTTGTTCCTGGGC.............................................................. 22 2 1 3.00 3 0 0 3 0 0 0
................................................................TCAGGTACTTAGTGACTTTCAA................................................................................................... 22 1 1 3.00 3 0 0 2 1 0 0
.................................................................CAGGTACTTAGTGACTCTCACT.................................................................................................. 22 1 1 3.00 3 3 0 0 0 0 0
.....................................................................................................GGGATCCACTTTGTGCCTGGTC.............................................................. 22 2 1 3.00 3 0 0 3 0 0 0
..................................................................AGGTACTTAGTGACTCTCAC................................................................................................... 20 1 1 3.00 3 2 0 0 1 0 0
.....................................................................................................GGGAGCCACTTTGTGCCTGGGAA............................................................. 23 2 1 3.00 3 0 3 0 0 0 0
................................................................TCAGTTACTTAGTGACTCTCAAA.................................................................................................. 23 2 1 3.00 3 1 1 1 0 0 0
.....................................................................................................GGGAGCCACTTTGTTCCTGGG............................................................... 21 1 1 3.00 3 0 0 2 1 0 0
.................................................................CAGGTACTTAGTGACTCTCAAAT................................................................................................. 23 2 1 3.00 3 3 0 0 0 0 0
................................................................TCAGGTACTTAGGGACTCTC..................................................................................................... 20 1 1 3.00 3 1 1 0 0 1 0
.......................................................................................................GAGCCACTTTGTGCCTGGGC.............................................................. 20 0 1 3.00 3 1 0 2 0 0 0
................................................................TCAGGTACTTAGTGAATCTCAA................................................................................................... 22 1 1 3.00 3 0 0 0 3 0 0
................................................................TCAGGTACTTTGTGACTCTCA.................................................................................................... 21 1 1 3.00 3 1 0 0 2 0 0
................................................................TCAGGTAGTTAGTGACTCTCAA................................................................................................... 22 1 1 3.00 3 1 1 0 1 0 0
.....................................................................................................GGGAGCCACTTTGTACCTGGGC.............................................................. 22 1 1 3.00 3 0 0 2 1 0 0
................................................................TTAGGTACTTAGTGACTCTCAC................................................................................................... 22 2 1 3.00 3 0 1 0 2 0 0
................................................................TCAGGTACTCAGTGACTCTCAA................................................................................................... 22 1 1 3.00 3 1 0 1 1 0 0
................................................................TCAGGTACTTAGTGTCTCTCAA................................................................................................... 22 1 1 3.00 3 1 0 0 1 1 0
................................................................TCAGTTACTTAGTGACTCTC..................................................................................................... 20 1 1 3.00 3 1 1 0 1 0 0
.....................................................................................................GGGAGCCACTTTATGCCTGGGC.............................................................. 22 1 1 3.00 3 0 0 2 0 0 1
..................................................................AGGTACTTAGTGACTCTCAAA.................................................................................................. 21 1 1 3.00 3 2 0 0 1 0 0
.....................................................................................................GGGAGCCACTTTTTGCCTGGGC.............................................................. 22 1 1 3.00 3 1 0 2 0 0 0
.....................................................................................................GGGAGCCACTTTGTGCCTGGCCT............................................................. 23 2 1 3.00 3 0 0 3 0 0 0
................................................................TCAGGGACTTAGTGACGCTCAA................................................................................................... 22 2 1 3.00 3 0 0 0 3 0 0
.....................................................................................................GGGAGACACTTTGTGCCTGGGCT............................................................. 23 2 1 3.00 3 0 0 3 0 0 0
................................................................ACAGGTACTTAGTGACTCTC..................................................................................................... 20 1 1 3.00 3 0 3 0 0 0 0
.....................................................................................................GGGTGCCACTTTGTGCCTGG................................................................ 20 1 1 3.00 3 0 3 0 0 0 0
................................................................TCAGGTACTTGGTGACTCTCAA................................................................................................... 22 1 1 3.00 3 1 1 0 1 0 0
................................................................TCAGGTACTTAGTTACTCTCAAA.................................................................................................. 23 2 1 3.00 3 1 1 0 1 0 0
................................................................TCAGGTACTTACTTACTCTCA.................................................................................................... 21 2 1 3.00 3 0 0 0 3 0 0

Anti-sense strand reads

CCATTCCTAATTTACCTTTAGATAAGGCTAACCTACACTTTCACGGTCTTCAGGTGAACCATCGAGTCCATGAATCACTGAGAGTTACGTAAACTGTAAAACCCTCGGTGAAACACGGACCCGGTAGTCACGCTGATATAGAAGATAATTTTTTTAACAAATTTTATATACCATATATCACAAGA

***********************************************((((((((.(((.((((((((((..((((.(((((((.............))))))).))))..)))))))))).))))))).))))..************************************************* 		Read size # Mismatch Hit Count Total Norm Total V055

head

 M058

embryo
...................................................................CGATGAATCCCTGAGCGTTA.................................................................................................. 20 3 3 0.33 1 1 0
.........................................CACGGTCTTCAGGTGCACA............................................................................................................................. 19 2 12 0.08 1 0 1
....................................................................CGTCAATGACTGAGAGTTA.................................................................................................. 19 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_12916:15864813-15864997 - dan-mir-306 Known_mirbase GGTAAGGAT--TAA-------A--------------------------------TG--------------GA-AAT------CTA-----TTC-------CGATTGGAT---G---TGA-----A-----AG--TGCC-----AGAAGTCCAC---------TTG-GTAGCTCAGGTACTTAGTGACTCTCAAT--------GC-ATTTGAC-ATTTTGGGAGCCACTTTGTGCCTGGGCCATCAGTGCGACTATATC----T-TCT--------------------------------------------------------A-------------TT-AAAAAAA------------------------------------------------------TTGT-----------------T---------------------TAAAATATATGGTATAT-----------AGTGTT--CT------
droBip1 scf7180000396717:103544-103726 - GGTAAGGAT--TTG---CTGAT--------------------------------TAAATG----------GA-AAA------A-T----ATTGTG-------------A-AAG-----------------TT--GACC---CGAAAAGTCCAC---------TTA-ATGGCTCAGGTACTTAGTGACTCTCAAT--------GT-ATTTGAC-ATTTTGAGAGCCACTTTGTGCCTGGGCCATCAGTGTGGCTATATC----T-TCT--------------------------------------------------------ATATAATCATGGTAAT-ATAGTGT------------------------------------------------------TGAA------------------------------------------------------------------ATATAGT--AT------
droKik1 scf7180000302382:529354-529492 + G---------------------------------------------------------------------------------------------------------------------------------------------------CCCACTTG------ATG-ATGGCTCAGGTACTTAGTGACTCTCAAA--------TGCCTTGAAAAGTTTTGAGAGTCTCTCTGTGCCTAGGCTGTAGGTGAGGCAAACTC----A-ACT--------------------------------------------------------AC------------AT-ACA-------------------------------------------------------------T-----------CAAT---------------------TAAATTAT------------TAAATTAAATTACTGTT--TT------
droFic1 scf7180000454078:624000-624194 + GGTGAGAAA--TTG---TTTTT---------------------------------TAAAGTGAA--------T---ATGGAT--------CAG-------TGGCTATAG-CAG---TGC-----A-----TA--TTTT-----CTGTGCTTGC---------TCG-ATGGCTCAGGTACTTAGTGACTCTCAAT--------GG-ATTTCAC-ATTTTGGGAGTCGCTCTGTGCCTGTGCTGCAAGTAAGACATTCTC----CTACA--------------------------------------------------------A-------------AAAAAAGTGT------------------------------------------------------TAAA-----------------AAT----------------AAGTTGATTAC--------------------AACAGG--TT------
droEle1 scf7180000490579:645500-645721 - GGTAAGAAT--TTAAACAA--A--------------------------------AAGAAGTGCA--------C---TTGGAT---A---TCAG-------TATATTTAT-AAGC-GTGC-----A-----TTT-GATT-----TTAAGCCCAC---------TTG-ATTGCTCAGGTACTTAGTGACTCTCAAT--------GC-TTTTGAC-ATTTTGGGAGTCGCTCTGTGCCTGTGCTGCCAGTGAAGCAATGTC----T-ACA--------------------------------------------------------G-------------GT-AAAGTGA------------------------------------------------------TAAA-----------------TATAGTTTCATCACAACCA---------ACATGTTAAAA-----------AGTGTT--TAAAGAAT
droRho1 scf7180000768553:9326-9543 + GGTAAACAT--TTT---TA-------TA---------------------------CAAAGTGCA--------T---ATGGAAC-AGTG-TCAG-------TGTATATCT-CAGTAGTGC-----A-----TAT-ATTT-----TTGAGCCCAC---------TCG-ATGGCTCAGGTACTTAGTGACTCTCAAT--------GC-TTTCGAC-ATTTTGGGAGTCGCTCTGTGCCTGTGCTGCCAGTGAAGCATTCTC----C-CCA--------------------------------------------------------T-------------TA-AAAGTGT------------------------------------------------------TAAC-----------------TATAATTGCAATAAAAGCA---------ATATGTGAACT-----------AGTTTT--TA------
droBia1 scf7180000301468:857944-858149 + GGTACGAGC--TGT-TTCCTTATACATG---------------------------CAAAGTGCT--------T---GTGGAT--------AAG-------TGT-TTTAT-CAG---TGGAA---A-----AT--GAAT-----TCAAGCTTAC---------TAG-GTGGCTCAGGTACTTAGTGACTCTCAAT--------GC-TTTCGAC-ACTTTGGGACTCGCTCTGTACCTGCGCTGCCGGTGAGGCCCTCTC----T-ACA--------------------------------------------------------A-------------AG-AA----A------------------------------------------------------TACA-----------------AAA----------------TAGTATAT-ATAA-----------TATAAGAAGTGCT--CT------
droTak1 scf7180000415914:422607-422802 + GGTAGGGAT--TTC--------------------------------------------------------------TTATA--------TGAGTGTATAT--TATATAT-CAG---TGC-----A-----TATCTCTT-----TTAAGCCCAC---------TCG-ATGGCTCAGGTACTTAGTGACTCTCAAT--------GC-TTTCGAC-ATTTTGGGAGTCGCTCTGTGCCTGCGCCGCCAGTAAGGCATTCTC----C-ACA--------------------------------------------------------G-----------AAAT-AAAGTGT------------------------------------------------------TAAA-----------TAAATAAAT----------------AAGTAAA-----------------TATAAGAAGTGAT--TT------
droEug1 scf7180000408961:272290-272485 + GGTAAGAAT--ATATGTACATATGTATA---------------------------TAAAGTACA--------A---ATGGAT--------CAA-------TGTG----C-AAG---TGA-----C-----TA--TTTT-----TCAAGTCCAC---------TTA-ATGGCTCAGGTACTTAGTGACTCTCAAT--------GA-TTTTGAC-AATTTGGGAGTCGCTCTGTGCCTGTGCTGCTAGTGAGGCAATCTTC---T-ACA--------------------------------------------------------A-------------AT-AAAGTGA------------------------------------------------------A---------------------------------------------TTTACATATCAACA-----------AGTGAT--TA------
dm3 chr2L:16698348-16698549 + dme-mir-306 Known_mirbase GGTATGTGT--TAT-------T--------------------------------TA--------------GT-GGT------GTTTCTT-GTG-------TGTTTAAAT-CAG---TGA-----A-----TA--GTTT-----AAAAGTCCAC---------TCG-ATGGCTCAGGTACTTAGTGACTCTCAAT--------GC-TTTTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGCCAGTGGGACATAATC----T-ACA--------------------------------------------------------A-------------AT-AAAGTGA------------------------------------------------------TAAT-----------CAGTGATAT----------------CAGTGAAATACATTGCAATG-----------AGTGCC--TT------
droSim2 2l:16265175-16265370 + dsi_274 confident GGTATGTGT--TAT-------T--------------------------------TA--------------GT-GGT------GACTTTA-GTG-------TGTTTAAAT-CAG---TGA-----A-----TA--GTTT-----AAAAGTCCAC---------TCG-ATGGCTCAGGTACTTAGTGACTCTCAAT--------GC-CTTTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGCCAGTGGGACATAATC----T-ACA--------------------------------------------------------A-------------AT-AAAGTGA------------------------------------------------------TAAG-----------------TAC----------------CAGTGAATTACATTGAAATG-----------AGTGCC--TC------
droSec2 scaffold_7:345365-345560 + dse-mir-306 Known_mirbase GGTATGTTT--TAT-------T--------------------------------TA--------------GT-GGT------GACTTTA-GTG-------TGTTTAAAT-CAG---TGA-----A-----CA--GTTT-----AAAATTCCAC---------TCG-ATGGCTCAGGTACTTAGTGACTCTCAAT--------GC-CTTTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGCCAGTGGGACATAATC----T-ACA--------------------------------------------------------A-------------AT-AAAGGGA------------------------------------------------------TAAG-----------------TAC----------------CAGTGAATAACATTGAAATG-----------AGTGCC--TC------
droYak3 2R:4404515-4404710 - dya-mir-306 Known_mirbase GGTACGTAC--TTT------------------------------------------GTAGTGCACGATTCG-A---TTAAA--------TCTG-------TGTATAAAT-CAG---TGA-----A-----AA--GTTT-----TAAAGTCCAC---------TCG-GTGGCTCAGGTACTTAGTGACTCTCAAT--------GC-TTTTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGCCAGTAGGACATAATC----C-ACA--------------------------------------------------------A-------------AT-AAAGTGA------------------------------------------------------TT----------------------------------------------TACATTGGAATA-----------AGTGAA--TTGAGAGT
droEre2 scaffold_4845:19767992-19768202 + der-mir-306 Known_mirbase GGTAAGTAC--TTT-GTAC-------TG---------------------------CACGGTTCG--------C---TTAAA--------TCTG-------TGTACAAGT-CAG---TGA-----A-----TA--GTTT-----AAGTGTCCAC---------TCG-GTGGCTCAGGTACTTAGTGACTCTCAAT--------GC-TTTTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGCCAGTGGGACGCAATC----A-ACA--------------------------------------------------------AA------------AT-AAAGTGA------------------------------------------------------TAAG-----------------TAC----------------AAGTGAATTGCATTGGAATA-----------AGTGACT-TAGAGTGC
dp5 4_group3:8443757-8443953 + dps-mir-306 Known_mirbase GGTAAGGGTGTTAA-------T--------------------------------TTGATGTG-----------GGC------G-CCTTC-GAG-------TGTTTAT-C-GAG---TGA-----T-----TT--ATCT-----ACAAGCACAC---------TTTGCCGGCTCAGGTACTTAGTGACTCTCAAT--------GC-TTTCGAC-ATCTTGAGAGTCTCTCTGTGCCTGCACTGGCGGTGGTGCAACTGC----A-ACG--------------------------------------------------------A-------------TTAAGGGTGT------------------------------------------------------TCCT-----------------AAT----------------AAGTGT--------------TA--TAATAAAAGTGTT--TT------
droPer2 scaffold_1:9894876-9895072 + dpe-mir-306 Known_mirbase GGTAAGGGTGTTAA-------T--------------------------------TTGATGCG-----------GGC------G-CCTTC-GAG-------TGTTTAT-C-GAG---TGA-----T-----TT--ATCT-----ACAAGCACAC---------TTTGCCGGCTCAGGTACTTAGTGACTCTCAAT--------GC-TTTCGAC-ATCTTGAGAGTCTCTCTGTGCCTGCACTGGCGGTGGTGCAACTGC----A-ACG--------------------------------------------------------A-------------TTAAGGGTGT------------------------------------------------------TCCT-----------------AAT----------------AAGTGT--------------TA--TATTTAGAGTGTT--AT------
droWil2 scf2_1100000004945:873662-873885 - dwi-mir-306-2 Known_mirbase GGTGAGCAA--ATA---CCTATTAAATACTTATCC-------------------AT--------------AA-GGT------GACAAAA-AAG-------TGACTATAC-AA----AGTGA---T-----AC--GAGTTAT--CTC---TGCC---------TAA-ACAGCTCAGGTACTTAGTGACTCTCAAA--------GAATATATATAGACTTGAGAGACGCTCTGTACCTAGACTGTTG-TGT--------C----T-GCG--------------------------------------------------------G-------------A-----------------------ATGTCAACATCATGTGTGTGTGTGTGTGTGATATATAGTG----------------------------------------ACATA-------------------TTATTATAGTAAT--GG------
droVir3 scaffold_12963:12863138-12863365 - dvi-mir-306 Known_mirbase GGTAAGAAA--CGT---C---------------------------------------------------GGC-CAC------CAGT---GCCGTGTCAGTTGTGCTTTT-CCG---TGC-----T-----GAACTCCT-----CCC---GCCC--TGCACACCCC-GCTGCTCAGGTACTTAGTGACTCTCAATCATCTATTGC-TTTGCAT-ACCTTGAGGGTCGCTCTGTGCCTGTGCCGCCTGTGCTGCACAACC----A-ACG--------------------------------------------------------A-------------CG-AGATGCA--------------------------TACGTGACCCTGACCGTGACCGGGAGTG----------------------------------------AAGTGT--------------AA--TAGCC--AGGATT--AG------
droMoj3 scaffold_6500:7201889-7202130 + dmo-mir-306 Known_mirbase GGTAAGAAC--TCA-----------------------------------------------------------GGC------T-CCATC--AA-------TATAGCTAGAGAG---TGC-----C-----CG--ATTC-----ATGA-TGTCC--AGCACACGCT-GCAGCTCAGGTACTTAGTGACTCTCAATCACATATTGC-TTTGCAT-ACTTTGAGGGTCGCTCTGTGCCTGTGCCGCCCGTGTTGCACACAGCCACA-CAATTGTGAATTCGAGTTCGAACTCCCCGGACTAGAGAATACAAGTGCAAGTGTCTTGTA-------------A-------------------------------------------------------------------------------------------------------------------TGTAAA-------------CGTGTTTTT-AAATAT
droGri2 scaffold_14978:830807-831085 + dgr-mir-306 Known_mirbase GGTAAGCCC--AGAGAGAG--A----TA-------AAAAAGCGAAAGATTCGTTC-GT------CGATTGGT-TCT------TATT---CTTGTGTTAAT---CATTAT-CAG---TGTTAAATGTGGAAAAACCAAT-----CC-AATCCGC--TGCACACGTT-GCTGCTCAGGTACTTAGTGACTCTCAATTCAACATTGT-ATTGCACGCCTTTGAGGGTCGCTCTGTGCCTGTGTTGCACGTGTTGCATTCAC----A-CCA--------------------------------------------------------T--------------C-CGAGTGATTTGTGTCCTTTGAGTGT------------------------------------CGATTTGTGTTACATCTAT---------------------ACGGT-------------------TATTTAAAGTGCT--TC------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GGTAAGGAT--TAA-------A--------------------------------TG--------------GA-AAT------CTA-----TTC-------CGATTGGAT---G---TGA-----A-----AG--TGCC-----AGAAGTCCAC---------TTG-GTAGCTCAGGTACTTAGTGACTCTCAAT--------GC-ATTTGAC-ATTTTGGGAGCCACTTTGTGCCTGGGCCATCAGTGCGACTATATC----T-TCT--------------------------------------------------------A-------------TT-AAAAAAA------------------------------------------------------TTGT-----------------T---------------------TAAAATATATGGTATAT-----------AGTGTT--CT------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................21115411.001541194572974218513150614
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................22110973.001097377351114124817523678
..........................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGC........................................................................................................................................................................................................................................................2213408.0034082552465595522705
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................2013234.003234556212522715113162
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................2311146.001146606239140172142
............................................................................................................................................................................CAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................201922.0092291543000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................211740.0074073910000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................221522.00522169272552222
...........................................................................................................................................................................TCAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................191352.00352167741855137
..........................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGG.........................................................................................................................................................................................................................................................211347.00347170439511460
..........................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGCT.......................................................................................................................................................................................................................................................231246.0024670221234
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.............................................................................................................................................................................................................................................................................................241218.0021810356391118
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------..............................................................................................................................................................................................................................................................................................231164.001642312513012
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.......................................................................................................................................................................................................................................................................................................221105.0010571159604
..........................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGG..........................................................................................................................................................................................................................................................20196.0096502014318
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------..............................................................................................................................................................................................................................................................................................23191.0091374311000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------..............................................................................................................................................................................................................................................................................................23178.007848224004
.............................................................................................................................................................................AGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................19177.007759213300
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCT........................................................................................................................................................................................................................................................................................................21172.007240106709
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------..............................................................................................................................................................................................................................................................................................23165.0065154010000
..........................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGCA.......................................................................................................................................................................................................................................................23164.00643003256
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................22160.00606000000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................20160.006047010300
..........................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGT........................................................................................................................................................................................................................................................22151.005110700925
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCC........................................................................................................................................................................................................................................................................................................21150.00502637113
............................................................................................................................................................................CAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................19149.00494900000
...........................................................................................................................................................................................................................GGAGCCACTTTGTGCCTGGGC........................................................................................................................................................................................................................................................21146.004621120022
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA-...........................................................................................................................................................................................................................................................................................25140.0040181011001
..........................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGA........................................................................................................................................................................................................................................................22139.00392311230
........................................................................................................................................................................................................................TTGGGAGCCACTTTGTGCCTGG..........................................................................................................................................................................................................................................................22139.00398218002
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------..............................................................................................................................................................................................................................................................................................23134.00342351005
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG.......................................................................................................................................................................................................................................................................................................22133.00333001002
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.............................................................................................................................................................................................................................................................................................24128.00283241000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCC..........................................................................................................................................................................................................................................................................................................19128.00280280000
..........................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGCC.......................................................................................................................................................................................................................................................23123.00232125013
...........................................................................................................................................................................................................................GGAGCCACTTTGTGCCTGGG.........................................................................................................................................................................................................................................................20122.00222200000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCG........................................................................................................................................................................................................................................................................................................21121.0021435414
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................22117.0017845000
...........................................................................................................................................................................................................................GGAGCCACTTTGTGCCTGGGCC.......................................................................................................................................................................................................................................................22114.0014530105
..........................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGT.........................................................................................................................................................................................................................................................21114.0014520115
........................................................................................................................................................................................................................TTGGGAGCCACTTTGTGCCTGGG.........................................................................................................................................................................................................................................................23113.0013332005
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.............................................................................................................................................................................................................................................................................................24113.00132101000
............................................................................................................................................................................CAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................18113.00131300000
..........................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGTT.......................................................................................................................................................................................................................................................23112.0012300108
...........................................................................................................................................................................TCAGGTACTTAGTGACTC...........................................................................................................................................................................................................................................................................................................18112.0012451200
..........................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGCTT......................................................................................................................................................................................................................................................24111.0011110009
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................21111.00111010000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------..............................................................................................................................................................................................................................................................................................22110.00101000000
..........................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGG........................................................................................................................................................................................................................................................22110.0010003403
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.............................................................................................................................................................................................................................................................................................24110.0010630010
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.............................................................................................................................................................................................................................................................................................24110.0010901000
..............................................................................................................................................................................GGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................18110.00101000000
.............................................................................................................................................................................AGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................18110.0010613000
..........................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTG...........................................................................................................................................................................................................................................................1919.009700200
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.............................................................................................................................................................................................................................................................................................2318.008800000
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................2318.008512000
........................................................................................................................................CC-----AGAAGTCCAC---------TTG-GTAGC.............................................................................................................................................................................................................................................................................................................................2018.008022103
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTA.........................................................................................................................................................................................................................................................................................................2018.008510002
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------..............................................................................................................................................................................................................................................................................................2318.008321002
...........................................................................................................................................................................................................................GGAGCCACTTTGTGCCTGG..........................................................................................................................................................................................................................................................1918.008620000
...........................................................................................................................................................................................................................GGAGCCACTTTGTGCCTGGGCT.......................................................................................................................................................................................................................................................2218.008020006
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTT.........................................................................................................................................................................................................................................................................................................2017.007240100
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................2117.007240100
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.............................................................................................................................................................................................................................................................................................2417.007601000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAT.......................................................................................................................................................................................................................................................................................................2117.007700000
...........................................................................................................................................................................................................................GGAGCCACTTTGTGCCTGGGCA.......................................................................................................................................................................................................................................................2217.007002005
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.............................................................................................................................................................................................................................................................................................2416.006420000
...............................................................................................................................................................................GTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................1815.005500000
..........................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGC.........................................................................................................................................................................................................................................................2115.005020003
..............................................................................................................................................................................GGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................1915.005500000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCT........................................................................................................................................................................................................................................................................................................2015.005500000
..........................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGTTT......................................................................................................................................................................................................................................................2415.005200012
.........................................................................................................................................C-----AGAAGTCCAC---------TTG-GTAGC.............................................................................................................................................................................................................................................................................................................................1915.005040001
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------..............................................................................................................................................................................................................................................................................................2214.004400000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCACA--------..............................................................................................................................................................................................................................................................................................2214.004310000
..........................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGTA.......................................................................................................................................................................................................................................................2314.004010102
.........................................................................................................................................................................................................................TGGGAGCCACTTTGTGCCTGGGC........................................................................................................................................................................................................................................................2314.004200002
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAG--------..............................................................................................................................................................................................................................................................................................2214.004400000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.............................................................................................................................................................................................................................................................................................2414.004211000
........................................................................................................................................................................................................................TTGGGAGCCACTTTGTGCCTG...........................................................................................................................................................................................................................................................2114.004130000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------G.............................................................................................................................................................................................................................................................................................2414.004400000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------AA-...........................................................................................................................................................................................................................................................................................2413.003300000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................2013.003201000
..........................................................................................................................................................................................................................GGGAGCCACTTTGTGCCTGGGAA.......................................................................................................................................................................................................................................................2313.003030000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------T.............................................................................................................................................................................................................................................................................................2313.003300000
............................................................................................................................................................................................................................GAGCCACTTTGTGCCTGGGC........................................................................................................................................................................................................................................................2013.003100002
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................2113.003201000
droBip1
GGTAAGGAT--TTG---CTGAT--------------------------------TAAATG----------GA-AAA------A-T----ATTGTG-------------A-AAG-----------------TT--GACC---CGAAAAGTCCAC---------TTA-ATGGCTCAGGTACTTAGTGACTCTCAAT--------GT-ATTTGAC-ATTTTGAGAGCCACTTTGTGCCTGGGCCATCAGTGTGGCTATATC----T-TCT--------------------------------------------------------ATATAATCATGGTAAT-ATAGTGT------------------------------------------------------TGAA------------------------------------------------------------------ATATAGT--AT------SizeHit CountTotal NormTotal
No Reads
droKik1
G---------------------------------------------------------------------------------------------------------------------------------------------------CCCACTTG------ATG-ATGGCTCAGGTACTTAGTGACTCTCAAA--------TGCCTTGAAAAGTTTTGAGAGTCTCTCTGTGCCTAGGCTGTAGGTGAGGCAAACTC----A-ACT--------------------------------------------------------AC------------AT-ACA-------------------------------------------------------------T-----------CAAT---------------------TAAATTAT------------TAAATTAAATTACTGTT--TT------SizeHit CountTotal NormTotal
No Reads
droFic1
GGTGAGAAA--TTG---TTTTT---------------------------------TAAAGTGAA--------T---ATGGAT--------CAG-------TGGCTATAG-CAG---TGC-----A-----TA--TTTT-----CTGTGCTTGC---------TCG-ATGGCTCAGGTACTTAGTGACTCTCAAT--------GG-ATTTCAC-ATTTTGGGAGTCGCTCTGTGCCTGTGCTGCAAGTAAGACATTCTC----CTACA--------------------------------------------------------A-------------AAAAAAGTGT------------------------------------------------------TAAA-----------------AAT----------------AAGTTGATTAC--------------------AACAGG--TT------SizeHit CountTotal NormTotal
No Reads
droEle1
GGTAAGAAT--TTAAACAA--A--------------------------------AAGAAGTGCA--------C---TTGGAT---A---TCAG-------TATATTTAT-AAGC-GTGC-----A-----TTT-GATT-----TTAAGCCCAC---------TTG-ATTGCTCAGGTACTTAGTGACTCTCAAT--------GC-TTTTGAC-ATTTTGGGAGTCGCTCTGTGCCTGTGCTGCCAGTGAAGCAATGTC----T-ACA--------------------------------------------------------G-------------GT-AAAGTGA------------------------------------------------------TAAA-----------------TATAGTTTCATCACAACCA---------ACATGTTAAAA-----------AGTGTT--TAAAGAATSizeHit CountTotal NormTotal
No Reads
droRho1
GGTAAACAT--TTT---TA-------TA---------------------------CAAAGTGCA--------T---ATGGAAC-AGTG-TCAG-------TGTATATCT-CAGTAGTGC-----A-----TAT-ATTT-----TTGAGCCCAC---------TCG-ATGGCTCAGGTACTTAGTGACTCTCAAT--------GC-TTTCGAC-ATTTTGGGAGTCGCTCTGTGCCTGTGCTGCCAGTGAAGCATTCTC----C-CCA--------------------------------------------------------T-------------TA-AAAGTGT------------------------------------------------------TAAC-----------------TATAATTGCAATAAAAGCA---------ATATGTGAACT-----------AGTTTT--TA------SizeHit CountTotal NormTotal
No Reads
droBia1
GGTACGAGC--TGT-TTCCTTATACATG---------------------------CAAAGTGCT--------T---GTGGAT--------AAG-------TGT-TTTAT-CAG---TGGAA---A-----AT--GAAT-----TCAAGCTTAC---------TAG-GTGGCTCAGGTACTTAGTGACTCTCAAT--------GC-TTTCGAC-ACTTTGGGACTCGCTCTGTACCTGCGCTGCCGGTGAGGCCCTCTC----T-ACA--------------------------------------------------------A-------------AG-AA----A------------------------------------------------------TACA-----------------AAA----------------TAGTATAT-ATAA-----------TATAAGAAGTGCT--CT------SizeHit CountTotal NormTotal
No Reads
droTak1
GGTAGGGAT--TTC--------------------------------------------------------------TTATA--------TGAGTGTATAT--TATATAT-CAG---TGC-----A-----TATCTCTT-----TTAAGCCCAC---------TCG-ATGGCTCAGGTACTTAGTGACTCTCAAT--------GC-TTTCGAC-ATTTTGGGAGTCGCTCTGTGCCTGCGCCGCCAGTAAGGCATTCTC----C-ACA--------------------------------------------------------G-----------AAAT-AAAGTGT------------------------------------------------------TAAA-----------TAAATAAAT----------------AAGTAAA-----------------TATAAGAAGTGAT--TT------SizeHit CountTotal NormTotal
No Reads
droEug1
GGTAAGAAT--ATATGTACATATGTATA---------------------------TAAAGTACA--------A---ATGGAT--------CAA-------TGTG----C-AAG---TGA-----C-----TA--TTTT-----TCAAGTCCAC---------TTA-ATGGCTCAGGTACTTAGTGACTCTCAAT--------GA-TTTTGAC-AATTTGGGAGTCGCTCTGTGCCTGTGCTGCTAGTGAGGCAATCTTC---T-ACA--------------------------------------------------------A-------------AT-AAAGTGA------------------------------------------------------A---------------------------------------------TTTACATATCAACA-----------AGTGAT--TA------SizeHit CountTotal NormTotal
No Reads
dm3
GGTATGTGT--TAT-------T--------------------------------TA--------------GT-GGT------GTTTCTT-GTG-------TGTTTAAAT-CAG---TGA-----A-----TA--GTTT-----AAAAGTCCAC---------TCG-ATGGCTCAGGTACTTAGTGACTCTCAAT--------GC-TTTTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGCCAGTGGGACATAATC----T-ACA--------------------------------------------------------A-------------AT-AAAGTGA------------------------------------------------------TAAT-----------CAGTGATAT----------------CAGTGAAATACATTGCAATG-----------AGTGCC--TT------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................211766317.0076631700104812501436525227922645101600296348410456020627131781202469238110145517391811258216911756432134623241002404169873013282089417521381480569432530342517000000000000000004646346744385693216411112724949591263112292022101591105831399866147737823120254551108825592793205039027422109412509642068011467710703302773461826217922112021717479168135210413371471171814919013912520823843323401226571458019812661313716242143169243262281657344949786060994203214063165272603733464902738351912022666129264819932812948634520132421192025392344212356981084494023114287287663103519161410338900743670612516271127141425302474513614320180342679239521230845523317341118320400357436316123842243433721401917707133426141274155648952120608391251474410648209266920371690399531220514942391527381947880261115861141476901846131301246952327941751297242714711610719940911421165328418945850397117457850466331043323273817511787366433713473309263672849224424361197672114521860938938912418512909135413300
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................221710671.0071067110006625775713633320400000557127196234607342333411719170267258381061194447612111453333536269424919665072750117873855298221644880076565500000000000000000170281708714043111612089834152380937130223534491193131214602015549153279272742380914717031661644522236540122310813446178608632168377973974766122110240281331422717111822443627112310561711457730602902220277110271490211616422182253422549202311436512793291536080244843554190744181936163252330600592032112159283136495869524519165335925785371182142424904045052065632821321510692802849850943912368998161152764738046930225235787671800628171100334360114394619993780952203043489896284755520127516405546411755196233222934221222732943842114139043856228418248864580279463131171343846264733889290612373031031342139926227134736369414622364946442901402595526944362928388591066671620122428516140012013301374747273953271446903436658158646368316692111032621735117222
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................231121263.0012126300001311041120310000047831085900240000000310714233680181234674561035731756338159997563269780000000000000000000000015431613126810884104383841603214002221432250252019053771628118982236116560118151512783715315827632006288626715220250179324119423363248239529155180317356243293423241303862317248380017801701661314611292250911034212201711053331471940037385512811203431875310000029352792057056231196763873718555613845939563941325919300173912002310117539194198581304915360976317611183016100109471986720719752474932962251524041635333173378213640629175663929332967481604725446292160649968121581484011196631441759262673564512510417143273211420685101114412363701441663191141793
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................201106203.00106203000021544001111102007422223787010286217715418721280627412487963348035461115132161266444033587391200563033000000000000000008282833970695486395156037366111145174517981800924324152116362414559938313363933234212202291801471816518714126250000001251850389294135424244539165345331449110398124135178293318657113729023383469028424712188173171955288540431041840211409715135640001860454900000641760043007957346651172280392108257208081095915412668326632312028011004960255712136924430198501661726040814511146515421116729338372242316857371672104125214979017898454375182912416193347031511661266217259186521476637880117663610520452164489551201611581151294304761452022502044520169177763527718132092123109424016351315895427520
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................22148875.0048875000000030000000000001512213005000000012416881367619540628653967137565278711800000000000000000000000358335301248118131430171118104114216000241023353526653313008224982606550784272511000504839398205367743145481107956671243509556573522501121042400290061111222304321012446030869324200510345642121660000003161699018305648240326443551827853183052437476206277009304120737726421720335329103143615033143615543414932549355145141709369153098665173117710564627356333111813024777083217118410086504113359301141634321055161414324115045290
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGC........................................................................................................................................................................................................................................................22126323.0026323100019811202418835132293914500511706072134501010514918210216011370392910002511700000000000000000453471352372163951413731781123426476050326372617445866610712817678596796393258092372941248038673283518038161871120171720442421015193720101540144017281513491761711401000130604502247221062046151111819163501020414342618003003103008400000048338071225109650592189110121111110384037783197000013008151144111129581561457310459741044919312426186524178932171217161213074313851580710114241201319314317211460082030010012592156422472531283485211373824321102862118910191445762681459343
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTG.........................................................................................................................................................................................................................................................21119913.0019913000034552031522637320064120120152451118113104541011153721343310122130001612000000000000000000777647541115772788073819813481112216914383995161868420615146515922259289435547733128338224531361010022301431671098614444758801329131210016977001106072309764025311917245013310825410226028000661221100101000101130000009221623371518710318017919929917620518341444000023161026512388451433262445191001250146052841481615324781111453373012321119136122142139614917391513111133119103780220065353411911809108201324352930755001407319221965
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.............................................................................................................................................................................................................................................................................................24116778.001677800000023000110000000717290002000000022016681523574422166874426109442590000000000000000000000016216112811604924177204200000217300020011810104020410270171010318091119010025211010402611715453584682975052329312922210010500002744019004192130280462020105524444392011532322200017315000000064182384317126925666642441139795620837001020005302041284106937110300562831312232519894813624226726938339573973211111015111000318428127641400101015344692216101403220215316347132113335180
...........................................................................................................................................................................TCAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................19116054.0016054000000000000000000005214517025611133350220541881054441740112432933710007739360000000000000000020001906162712270509005820200230601186017199572613013111120572060301031223335814312300000115334541615715402129552571218926156533824157307713705041842135137366701637360357356214000410741000028004000231712369665623121755120191021714259005800001381238673323651922111640161352922835492138784931224743330529213411913059231522481331382052407227934716121618241034223281324031734166546041010501161213521024418834616460
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droSim2
GGTATGTGT--TAT-------T--------------------------------TA--------------GT-GGT------GACTTTA-GTG-------TGTTTAAAT-CAG---TGA-----A-----TA--GTTT-----AAAAGTCCAC---------TCG-ATGGCTCAGGTACTTAGTGACTCTCAAT--------GC-CTTTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGCCAGTGGGACATAATC----T-ACA--------------------------------------------------------A-------------AT-AAAGTGA------------------------------------------------------TAAG-----------------TAC----------------CAGTGAATTACATTGAAATG-----------AGTGCC--TC------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
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............................................................................................................................................................................CAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................2011318.001318304122300111139233100000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.............................................................................................................................................................................................................................................................................................2411307.0013070059002252024853719100000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGC........................................................................................................................................................................................................................................................221798.007982023320028631413497773010
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------..............................................................................................................................................................................................................................................................................................231783.007831801132002041981751403200000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCC..........................................................................................................................................................................................................................................................................................................191675.006754833115900001001000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTC...........................................................................................................................................................................................................................................................................................................181623.0062373224120022257354307101002
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................201594.0059420286007574155117701300000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCT........................................................................................................................................................................................................................................................................................................211557.005572735550800342746504901000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTG.........................................................................................................................................................................................................................................................211480.00480200320019818062451014000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCG........................................................................................................................................................................................................................................................................................................211458.0045895221413900505231213400000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.............................................................................................................................................................................................................................................................................................241445.0044502320083621671223001000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.............................................................................................................................................................................................................................................................................................241433.004331023500110561241145003001
.................................................................................................................................................................................ACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................161402.004020000001095793233000000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................191284.00284403470022436244421700000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.............................................................................................................................................................................................................................................................................................241275.002753262004448109601000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.............................................................................................................................................................................................................................................................................................241272.002723214600636164571100000
................................................................................................................................................................................TACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................171265.0026500000038371083943000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.............................................................................................................................................................................................................................................................................................241241.002412013400554972451000000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................221233.0023300017300121917111000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCC........................................................................................................................................................................................................................................................................................................211192.0019252691001211443731700000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG.......................................................................................................................................................................................................................................................................................................221178.00178123178001113454225200000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------AA-...........................................................................................................................................................................................................................................................................................251175.00175001200263170440001000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.............................................................................................................................................................................................................................................................................................241167.00167057600204435491000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------AA-A..........................................................................................................................................................................................................................................................................................261159.00159001000222462481010000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------..............................................................................................................................................................................................................................................................................................231147.00147213000382952220000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------T.............................................................................................................................................................................................................................................................................................241124.00124195614000135881000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------AA-...........................................................................................................................................................................................................................................................................................251119.00119000000201448361000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCG..........................................................................................................................................................................................................................................................................................................191113.001136194300000000000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------T.............................................................................................................................................................................................................................................................................................241106.001061101700029212170000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------A.............................................................................................................................................................................................................................................................................................241104.00104306200231834180000000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................211103.001030006001020362110000000
...........................................................................................................................................................................TCAGGTACTTAGTGA..............................................................................................................................................................................................................................................................................................................15292.0018400000021311418100000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACG--------..............................................................................................................................................................................................................................................................................................23189.00891061700010191870200000
...............................................................................................................................................................................GTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................18177.00770000005261054000000
............................................................................................................................................................................CAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................19173.0073104600000422000000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................21170.00700004800071041000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------A.............................................................................................................................................................................................................................................................................................24168.006800010091228180000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTA.........................................................................................................................................................................................................................................................................................................20165.00651032002930171000000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.............................................................................................................................................................................................................................................................................................23159.0059001390013950100000
................................................................................................................................................................................TACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................16158.00580000006628513000000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGA........................................................................................................................................................................................................................................................22156.00560010003015315001000
..................................................................................................................................................................................CTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................15156.0056000000463835000000
.................................................................................................................................................................................ACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................15152.00520000002171725000000
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................23146.00462012000251042000000
..............................................................................................................................................................................GGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................19145.00450009000311814000000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCT............................................................................................................................................................................................................................................................18145.00451623300000003000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AT-...........................................................................................................................................................................................................................................................................................25144.00441000008517130000000
...........................................................................................................................................................................TCAGGTACTTAGTGAC.............................................................................................................................................................................................................................................................................................................16141.0041000000248615001014
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------TT-...........................................................................................................................................................................................................................................................................................25141.00410010007710160000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------TA-...........................................................................................................................................................................................................................................................................................25141.00410100001271650000000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................20135.00351003001041250000000
.................................................................................................................................................................................ACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................17234.506900000053131434000000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------A.............................................................................................................................................................................................................................................................................................22134.0034000100569121000000
.............................................................................................................................................................................AGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................18133.003360220023548100000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GC-C..........................................................................................................................................................................................................................................................................................26132.0032111800042330000000
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................22129.0029101100051442100000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GC-CT.........................................................................................................................................................................................................................................................................................27127.0027511500004200000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTT.........................................................................................................................................................................................................................................................................................................20127.0027131130021321000000
................................................................................................................................................................................TACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................18226.5053100000892834000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCGC.......................................................................................................................................................................................................................................................................................................22125.0025000000108330100000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------TA-A..........................................................................................................................................................................................................................................................................................26123.0023000000137120000000
...............................................................................................................................................................................GTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................17123.0023000000004217000000
.............................................................................................................................................................................AGGTACTTAGTGACT............................................................................................................................................................................................................................................................................................................15122.0022000000000022000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCAA.........................................................................................................................................................................................................................................................................................................20122.002210000028542000000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGG........................................................................................................................................................................................................................................................22122.0022000000000002200000
droSec2
GGTATGTTT--TAT-------T--------------------------------TA--------------GT-GGT------GACTTTA-GTG-------TGTTTAAAT-CAG---TGA-----A-----CA--GTTT-----AAAATTCCAC---------TCG-ATGGCTCAGGTACTTAGTGACTCTCAAT--------GC-CTTTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGCCAGTGGGACATAATC----T-ACA--------------------------------------------------------A-------------AT-AAAGGGA------------------------------------------------------TAAG-----------------TAC----------------CAGTGAATAACATTGAAATG-----------AGTGCC--TC------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................22134533.00345333133312418161260
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................21124680.0024680220369815431003
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................2112835.0028352832012
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................2312680.002680223615183246
............................................................................................................................................................................CAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................2011965.0019651963011
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................2011531.00153185328366284
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................2211430.0014301289104982
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGC........................................................................................................................................................................................................................................................221315.0031521554253
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.............................................................................................................................................................................................................................................................................................241312.0031225512432
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------..............................................................................................................................................................................................................................................................................................231250.002502244184
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------..............................................................................................................................................................................................................................................................................................231237.0023715862053
...........................................................................................................................................................................TCAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................191218.0021813604636
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................221205.00205205000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.......................................................................................................................................................................................................................................................................................................221198.0019817301213
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTG.........................................................................................................................................................................................................................................................211197.001971821311
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------..............................................................................................................................................................................................................................................................................................231144.00144134073
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................201144.001441181187
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................211123.00123123000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------..............................................................................................................................................................................................................................................................................................231119.00119111062
.............................................................................................................................................................................AGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................19192.009275098
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCG........................................................................................................................................................................................................................................................................................................21186.008686000
............................................................................................................................................................................CAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................19179.007978010
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------..............................................................................................................................................................................................................................................................................................23170.007059083
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA-...........................................................................................................................................................................................................................................................................................25156.005643085
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.............................................................................................................................................................................................................................................................................................24134.003433001
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.............................................................................................................................................................................................................................................................................................23127.002727000
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................23124.002423010
..............................................................................................................................................................................GGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................18124.002424000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCT........................................................................................................................................................................................................................................................................................................21123.002312218
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAT.......................................................................................................................................................................................................................................................................................................21121.002121000
...........................................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTG.........................................................................................................................................................................................................................................................20120.002020000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG.......................................................................................................................................................................................................................................................................................................22119.001918001
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................22116.001615010
..............................................................................................................................................................................GGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................19115.001515000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.............................................................................................................................................................................................................................................................................................24115.001514010
............................................................................................................................................................................CAGGTACTTAGTGACTCTCACC--------..............................................................................................................................................................................................................................................................................................22114.001414000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCA.......................................................................................................................................................................................................................................................23113.001312010
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.............................................................................................................................................................................................................................................................................................24113.001310210
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------..............................................................................................................................................................................................................................................................................................22112.001212000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCACA--------..............................................................................................................................................................................................................................................................................................22112.001212000
...........................................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTGC........................................................................................................................................................................................................................................................21112.001211001
...........................................................................................................................................................................TCAGGTACTTAGTGACTC...........................................................................................................................................................................................................................................................................................................18111.00115033
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................21111.00118012
............................................................................................................................................................................CAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................18110.001010000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................2019.0099000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------..............................................................................................................................................................................................................................................................................................2219.0099000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.............................................................................................................................................................................................................................................................................................2419.0097020
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACG--------..............................................................................................................................................................................................................................................................................................2319.0097011
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.............................................................................................................................................................................................................................................................................................2418.0088000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAG.......................................................................................................................................................................................................................................................................................................2118.0088000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGT........................................................................................................................................................................................................................................................2217.0077000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------..............................................................................................................................................................................................................................................................................................2317.0077000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.............................................................................................................................................................................................................................................................................................2417.0076001
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAG--------..............................................................................................................................................................................................................................................................................................2216.0066000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCT........................................................................................................................................................................................................................................................................................................2016.0066000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTT.........................................................................................................................................................................................................................................................................................................2015.0053011
...........................................................................................................................................................................TCAGGTACTTAGTGACTCAA.........................................................................................................................................................................................................................................................................................................2015.0052030
...............................................................................................................................................................................GTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................1815.0055000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCACA--------A.............................................................................................................................................................................................................................................................................................2315.0055000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTT.........................................................................................................................................................................................................................................................2115.0055000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.............................................................................................................................................................................................................................................................................................2415.0055000
.............................................................................................................................................................................AGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................1815.0053011
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------T.............................................................................................................................................................................................................................................................................................2414.0042011
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------A.............................................................................................................................................................................................................................................................................................2414.0043010
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCGC.......................................................................................................................................................................................................................................................................................................2214.0044000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCC........................................................................................................................................................................................................................................................................................................2114.0043001
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................2413.0033000
............................................................................................................................................................................................................................GGGTCACTCTGTGCCTGTGC........................................................................................................................................................................................................................................................2013.0033000
.....................................................................................................................................................................................................................ATTTTGGGGGTCACTCTGTGCCTGTGC........................................................................................................................................................................................................................................................2713.0031020
...........................................................................................................................................................................TCAGGTACTTAGTGACTCA..........................................................................................................................................................................................................................................................................................................1913.0032010
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................2113.0031002
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------AA-...........................................................................................................................................................................................................................................................................................2412.0022000
droYak3
GGTACGTAC--TTT------------------------------------------GTAGTGCACGATTCG-A---TTAAA--------TCTG-------TGTATAAAT-CAG---TGA-----A-----AA--GTTT-----TAAAGTCCAC---------TCG-GTGGCTCAGGTACTTAGTGACTCTCAAT--------GC-TTTTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGCCAGTAGGACATAATC----C-ACA--------------------------------------------------------A-------------AT-AAAGTGA------------------------------------------------------TT----------------------------------------------TACATTGGAATA-----------AGTGAA--TTGAGAGTSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................21116357.00163577408256506419301221913210021
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................2219791.00979165358611922963127235260040
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................2013549.0035496824092152789013430010
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGC........................................................................................................................................................................................................................................................2211364.001364418710661050200000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................2311292.001292192633311102133180020
............................................................................................................................................................................CAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................201857.008570856100000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................191742.00742507119605193100010
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................221676.00676722223363121200001
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................211614.006140612101000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------..............................................................................................................................................................................................................................................................................................231220.0022071079760210000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------..............................................................................................................................................................................................................................................................................................231184.0018466169930000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.............................................................................................................................................................................................................................................................................................241156.0015617804781200010
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------..............................................................................................................................................................................................................................................................................................231144.0014453210430000000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTG.........................................................................................................................................................................................................................................................211139.0013908243112010000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.......................................................................................................................................................................................................................................................................................................221119.0011910683421220000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCC..........................................................................................................................................................................................................................................................................................................19192.00927202000000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCT........................................................................................................................................................................................................................................................................................................21189.008956171231000000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................22167.0067067000000000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................20161.00610431130400000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------..............................................................................................................................................................................................................................................................................................23152.00529122730100000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCC........................................................................................................................................................................................................................................................................................................21150.00502308130600000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA-...........................................................................................................................................................................................................................................................................................25150.00507311010100000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................19148.00480280191000000
............................................................................................................................................................................CAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................19136.0036034200000000
...........................................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTGC........................................................................................................................................................................................................................................................21136.00362231100000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------..............................................................................................................................................................................................................................................................................................23135.00352221100000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTC...........................................................................................................................................................................................................................................................................................................18127.0027115900200000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................21123.0023022100000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCG........................................................................................................................................................................................................................................................................................................21122.0022152230000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.............................................................................................................................................................................................................................................................................................24121.0021141420000000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGG........................................................................................................................................................................................................................................................22119.0019100180000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG.......................................................................................................................................................................................................................................................................................................22119.0019412110100000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCT.......................................................................................................................................................................................................................................................23117.0017211130000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCG..........................................................................................................................................................................................................................................................................................................19113.0013130000000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.............................................................................................................................................................................................................................................................................................24113.001313810000000
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................22112.001208210010000
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................21110.001031301200000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCC.......................................................................................................................................................................................................................................................2319.00900720000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------T.............................................................................................................................................................................................................................................................................................2419.00912600000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.............................................................................................................................................................................................................................................................................................2419.00902600100000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAT.......................................................................................................................................................................................................................................................................................................2118.00808000000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.............................................................................................................................................................................................................................................................................................2418.00811600000000
........................................................................................................................................TT-----TAAAGTCCAC---------TCG-GTGGC.............................................................................................................................................................................................................................................................................................................................2018.00800710000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTT.........................................................................................................................................................................................................................................................................................................2018.00810500200000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................2117.00715010000000
..............................................................................................................................................................................GGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................1817.00715100000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.............................................................................................................................................................................................................................................................................................2417.00721400000000
.........................................................................................................................................................................................ACTCTCAAT--------GC-TTTTGAC-ATTTTGGGGGT........................................................................................................................................................................................................................................................................2917.00700000000007
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGT........................................................................................................................................................................................................................................................2217.00704120000000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------..............................................................................................................................................................................................................................................................................................2217.00707000000000
............................................................................................................................................................................CAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................1817.00716000000000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------..............................................................................................................................................................................................................................................................................................2216.00606000000000
.............................................................................................................................................................................AGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................1816.00614010000000
..............................................................................................................................................................................GGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................1916.00606000000000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.............................................................................................................................................................................................................................................................................................2315.00505000000000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCT............................................................................................................................................................................................................................................................1815.00532000000000
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................2315.00503020000000
...........................................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTG.........................................................................................................................................................................................................................................................2015.00505000000000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------AA-...........................................................................................................................................................................................................................................................................................2415.00505000000000
...........................................................................................................................................................................TCAGGTACTTAGTGAC.............................................................................................................................................................................................................................................................................................................1615.00500000000050
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.............................................................................................................................................................................................................................................................................................2414.00403100000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.............................................................................................................................................................................................................................................................................................2414.00404000000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------T.............................................................................................................................................................................................................................................................................................2414.00402200000000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGA........................................................................................................................................................................................................................................................2214.00401300000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCTT.......................................................................................................................................................................................................................................................................................................2214.00413000000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTA.........................................................................................................................................................................................................................................................................................................2014.00402100100000
...............................................................................................................................................................................GTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................1813.00303000000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------T.............................................................................................................................................................................................................................................................................................2413.00301200000000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCA.......................................................................................................................................................................................................................................................2313.00303000000000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTG...........................................................................................................................................................................................................................................................1913.00300300000000
.........................................................................................................................................T-----TAAAGTCCAC---------TCG-GTGGC.............................................................................................................................................................................................................................................................................................................................1913.00300300000000
......................................................................................................................................GTTT-----TAAAGTCCAC---------TCG-GTGGC.............................................................................................................................................................................................................................................................................................................................2213.00300210000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTTG........................................................................................................................................................................................................................................................................................................2112.00201000100000
.............................................................................................................................................................................................................................GGTCACTCTGTGCCTGTGC........................................................................................................................................................................................................................................................1912.00202000000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCATC--------..............................................................................................................................................................................................................................................................................................2312.00200200000000
.........................................................................................................................................................................GCTCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................2312.00202000000000
droEre2
GGTAAGTAC--TTT-GTAC-------TG---------------------------CACGGTTCG--------C---TTAAA--------TCTG-------TGTACAAGT-CAG---TGA-----A-----TA--GTTT-----AAGTGTCCAC---------TCG-GTGGCTCAGGTACTTAGTGACTCTCAAT--------GC-TTTTGAC-ATTTTGGGGGTCACTCTGTGCCTGTGCTGCCAGTGGGACGCAATC----A-ACA--------------------------------------------------------AA------------AT-AAAGTGA------------------------------------------------------TAAG-----------------TAC----------------AAGTGAATTGCATTGGAATA-----------AGTGACT-TAGAGTGCSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................22155099.00550995214644332546419715204
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................21151360.00513604785855216699521815647
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................2114679.0046794675100120
............................................................................................................................................................................CAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................2014162.0041624158010030
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................2313789.0037893462362641241973
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................2012705.0027052124888041603120
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................2211216.0012161116346247290
...........................................................................................................................................................................TCAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................191493.0049340952228470
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.............................................................................................................................................................................................................................................................................................241469.004694336241167
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGC........................................................................................................................................................................................................................................................221423.00423199952302887
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------..............................................................................................................................................................................................................................................................................................231392.003923626213108
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.......................................................................................................................................................................................................................................................................................................221374.00374360313340
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................221343.00343343000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------..............................................................................................................................................................................................................................................................................................231265.0026519931179180
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................201229.00229215054050
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCG........................................................................................................................................................................................................................................................................................................211193.00193189002110
.............................................................................................................................................................................AGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................191188.00188176117030
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------..............................................................................................................................................................................................................................................................................................231170.001701501003151
............................................................................................................................................................................CAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................191167.00167167000000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTG.........................................................................................................................................................................................................................................................211144.001441234052100
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................211109.00109109000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------..............................................................................................................................................................................................................................................................................................231104.0010493713000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA-...........................................................................................................................................................................................................................................................................................25195.009590012020
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------..............................................................................................................................................................................................................................................................................................23193.009389021010
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................22174.0074610020110
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................23158.005854010030
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.............................................................................................................................................................................................................................................................................................24157.005754000210
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCT........................................................................................................................................................................................................................................................................................................21155.0055350512120
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG.......................................................................................................................................................................................................................................................................................................22144.004444000000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------..............................................................................................................................................................................................................................................................................................22138.003838000000
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................21136.003660510240
............................................................................................................................................................................CAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................18134.003434000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.............................................................................................................................................................................................................................................................................................24133.003329301000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAT.......................................................................................................................................................................................................................................................................................................21133.003333000000
..............................................................................................................................................................................GGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................18128.002828000000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.............................................................................................................................................................................................................................................................................................23127.002727000000
..............................................................................................................................................................................GGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................19124.002424000000
...........................................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTGC........................................................................................................................................................................................................................................................21120.002020000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.............................................................................................................................................................................................................................................................................................24118.001818000000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------..............................................................................................................................................................................................................................................................................................22117.001717000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCC........................................................................................................................................................................................................................................................................................................21117.00171059011
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAG.......................................................................................................................................................................................................................................................................................................21116.001616000000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................21115.001513002000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.............................................................................................................................................................................................................................................................................................24114.001413100000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.............................................................................................................................................................................................................................................................................................24114.001414000000
...........................................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTG.........................................................................................................................................................................................................................................................20113.001313000000
.............................................................................................................................................................................AGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................18113.001311010100
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.............................................................................................................................................................................................................................................................................................24112.001210200000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCACC--------..............................................................................................................................................................................................................................................................................................22111.001111000000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCA.......................................................................................................................................................................................................................................................2318.0088000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTC...........................................................................................................................................................................................................................................................................................................1817.0074100020
...........................................................................................................................................................................................................................GGGGTCACTCTGTGCCTGTGCT.......................................................................................................................................................................................................................................................2217.0076100000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCACA--------..............................................................................................................................................................................................................................................................................................2217.0077000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTA.........................................................................................................................................................................................................................................................................................................2016.0063000030
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTT.........................................................................................................................................................................................................................................................................................................2016.0065000010
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------AA-...........................................................................................................................................................................................................................................................................................2416.0066000000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGT........................................................................................................................................................................................................................................................2216.0066000000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................2016.0066000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------T.............................................................................................................................................................................................................................................................................................2416.0064110000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCGC.......................................................................................................................................................................................................................................................................................................2215.0055000000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTG...........................................................................................................................................................................................................................................................1914.0044000000
..........................................................................................................................................................................................................................GGGGGTCACTCTGTGCCTGTGCT.......................................................................................................................................................................................................................................................2314.0041102000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAG--------..............................................................................................................................................................................................................................................................................................2214.0044000000
dp5
GGTAAGGGTGTTAA-------T--------------------------------TTGATGTG-----------GGC------G-CCTTC-GAG-------TGTTTAT-C-GAG---TGA-----T-----TT--ATCT-----ACAAGCACAC---------TTTGCCGGCTCAGGTACTTAGTGACTCTCAAT--------GC-TTTCGAC-ATCTTGAGAGTCTCTCTGTGCCTGCACTGGCGGTGGTGCAACTGC----A-ACG--------------------------------------------------------A-------------TTAAGGGTGT------------------------------------------------------TCCT-----------------AAT----------------AAGTGT--------------TA--TAATAAAAGTGTT--TT------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................21194649.009464973713373228517315643184829740373489
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................22178816.0078816375451034487152140573621261515963120
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................2319293.009293164573711417616521137763
............................................................................................................................................................................CAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................2016809.00680906764514002267
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................2016035.00603534437741711015119619270329132
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................2115251.00525105192205004066
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.............................................................................................................................................................................................................................................................................................2412643.002643118748702500637181
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAC........................................................................................................................................................................................................................................................2212583.0025830156084614012303415
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................2211582.00158241144104293163241137
...........................................................................................................................................................................TCAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................1911381.00138135110418617420716919
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCA.........................................................................................................................................................................................................................................................2111059.00105909973253001525
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA-...........................................................................................................................................................................................................................................................................................251908.009080672130300202171
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------..............................................................................................................................................................................................................................................................................................231682.0068203583669422311620
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................221650.006500637100001020
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.......................................................................................................................................................................................................................................................................................................221487.004871287825103105615
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGC..........................................................................................................................................................................................................................................................201431.0043103742484001173
............................................................................................................................................................................CAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................191394.00394038920100200
.............................................................................................................................................................................AGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................191382.00382132620223010810
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................201340.0034002730021413524
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.............................................................................................................................................................................................................................................................................................231202.00202019800000202
...........................................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCAC........................................................................................................................................................................................................................................................211187.001870173122000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------..............................................................................................................................................................................................................................................................................................231185.0018501261816003310
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------..............................................................................................................................................................................................................................................................................................231184.0018401034354102422
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.............................................................................................................................................................................................................................................................................................241171.001710791123106636
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAA........................................................................................................................................................................................................................................................221157.0015701331220001000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................211127.00127012220100200
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCT........................................................................................................................................................................................................................................................................................................211127.001271065536522290
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------..............................................................................................................................................................................................................................................................................................231121.00121584116400920
............................................................................................................................................................................CAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................181104.00104010400000000
...........................................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCA.........................................................................................................................................................................................................................................................201104.00104010220000000
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................22184.008406821310351
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.............................................................................................................................................................................................................................................................................................24183.0083037700003441
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------AA-...........................................................................................................................................................................................................................................................................................24176.007607600000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG.......................................................................................................................................................................................................................................................................................................22167.006705410501600
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------..............................................................................................................................................................................................................................................................................................23167.006705910100501
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTG...........................................................................................................................................................................................................................................................19165.006506210000110
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................23163.006305131020510
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCG........................................................................................................................................................................................................................................................................................................21159.005914021701250
..............................................................................................................................................................................GGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................18158.005805800000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.............................................................................................................................................................................................................................................................................................24153.0053010200004001
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.............................................................................................................................................................................................................................................................................................24153.005304500000800
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.............................................................................................................................................................................................................................................................................................24153.0053032600001500
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................21153.005304200000911
........................................................................................................................................CT-----ACAAGCACAC---------TTTGCCGGC.............................................................................................................................................................................................................................................................................................................................21150.0050032601000110
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------..............................................................................................................................................................................................................................................................................................22150.005004400000600
...........................................................................................................................................................................TCAGGTACTTAGTGACTC...........................................................................................................................................................................................................................................................................................................18143.0043112730001514
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCC........................................................................................................................................................................................................................................................................................................21142.0042012431620050
..............................................................................................................................................................................GGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................19137.003703700000000
...........................................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGC..........................................................................................................................................................................................................................................................19134.003403310000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------CT-C..........................................................................................................................................................................................................................................................................................26128.002800000002800
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.............................................................................................................................................................................................................................................................................................24127.0027011000001501
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTA.........................................................................................................................................................................................................................................................................................................20123.00230600010880
.............................................................................................................................................................................AGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................18122.002201400230120
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GC-...........................................................................................................................................................................................................................................................................................25121.002101001100540
............................................................................................................................................................................CAGGTACTTAGTGACTCTCACA--------..............................................................................................................................................................................................................................................................................................22121.002101910000100
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTT.........................................................................................................................................................................................................................................................................................................20120.002001102000070
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------TT-...........................................................................................................................................................................................................................................................................................25120.00200720000911
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------..............................................................................................................................................................................................................................................................................................23120.002009000001010
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAT.......................................................................................................................................................................................................................................................................................................21120.002002000000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.............................................................................................................................................................................................................................................................................................24120.002001440000200
............................................................................................................................................................................CAGGTACTTAGTGACTCTCACC--------..............................................................................................................................................................................................................................................................................................22119.001901800000100
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------G.............................................................................................................................................................................................................................................................................................24117.001705100001100
.........................................................................................................................................................................................................................TGAGAGTCTCTCTGTGCCTGCA.........................................................................................................................................................................................................................................................22116.001601200000400
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAAA.......................................................................................................................................................................................................................................................23114.001401300000100
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCTT.......................................................................................................................................................................................................................................................................................................22114.00140900000050
...........................................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCACA.......................................................................................................................................................................................................................................................22114.001401300000001
.........................................................................................................................................T-----ACAAGCACAC---------TTTGCCGGC.............................................................................................................................................................................................................................................................................................................................20113.001311010000001
...............................................................................................................................................................................GTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................18113.001301100100100
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------T.............................................................................................................................................................................................................................................................................................24113.001303000001000
...........................................................................................................................................................................TCAGGTACTTAGTGA..............................................................................................................................................................................................................................................................................................................15112.00120000000624
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCACC.......................................................................................................................................................................................................................................................23112.00120731100000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------AA-...........................................................................................................................................................................................................................................................................................25112.00120310000800
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------AA-A..........................................................................................................................................................................................................................................................................................26112.001201000001100
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------..............................................................................................................................................................................................................................................................................................22112.001201110000000
.........................................................................................................................................................................................................................TGAGAGTCTCTCTGTGCCTGC..........................................................................................................................................................................................................................................................21111.001101100000000
...........................................................................................................................................................................TCAGGTACTTAGTGACT............................................................................................................................................................................................................................................................................................................17111.00110000000641
...........................................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCAA........................................................................................................................................................................................................................................................21111.001101100000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCATG--------..............................................................................................................................................................................................................................................................................................23110.00100000000820
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------T.............................................................................................................................................................................................................................................................................................24110.00100230000131
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GC-T..........................................................................................................................................................................................................................................................................................26110.00100510000310
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------TA-C..........................................................................................................................................................................................................................................................................................26110.00100000000640
...........................................................................................................................................................................TCAGGTACTTAGTGACTCC..........................................................................................................................................................................................................................................................................................................1919.0092250000000
.......................................................................................................................................TCT-----ACAAGCACAC---------TTTGCCGGC.............................................................................................................................................................................................................................................................................................................................2219.0090620100000
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAAAA......................................................................................................................................................................................................................................................2419.0090900000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCCT.......................................................................................................................................................................................................................................................................................................2219.0095100100020
............................................................................................................................................................................CAGGTACTTAGTGACTCTCACC--------A.............................................................................................................................................................................................................................................................................................2319.0090900000000
..............................................................................................................................................................................GGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................2019.0090810000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------TT-...........................................................................................................................................................................................................................................................................................2518.0080200000600
................................................................................................................................................................................TACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................1718.0080000000503
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AT-...........................................................................................................................................................................................................................................................................................2518.0080600000200
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCCC.......................................................................................................................................................................................................................................................................................................2218.0080104000210
...........................................................................................................................................................................TCAGGTACTTAGTGACTCA..........................................................................................................................................................................................................................................................................................................1918.0080000100403
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................2117.0070501000010
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCT.........................................................................................................................................................................................................................................................2117.0070601000000
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGT..........................................................................................................................................................................................................................................................2017.0070700000000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAG--------..............................................................................................................................................................................................................................................................................................2217.0070700000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCAA.........................................................................................................................................................................................................................................................................................................2017.0070000000511
.................................................................................................................................................................................ACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................1617.0070000000304
............................................................................................................................................................................CAGGTACTTAGTGACTCTCT........................................................................................................................................................................................................................................................................................................2017.0070700000000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................2017.0070600000100
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAT........................................................................................................................................................................................................................................................2217.0070510000010
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCC.........................................................................................................................................................................................................................................................2117.0070610000000
...........................................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCACC.......................................................................................................................................................................................................................................................2216.0060501000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------TA-...........................................................................................................................................................................................................................................................................................2516.0060000000204
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCACA.......................................................................................................................................................................................................................................................2316.0060510000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------A.............................................................................................................................................................................................................................................................................................2416.0060500000100
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------A.............................................................................................................................................................................................................................................................................................2216.0060600000000
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTT...........................................................................................................................................................................................................................................................1916.0060600000000
.................................................................................................................................................................................ACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................1516.0060000000303
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAGA--------A.............................................................................................................................................................................................................................................................................................2416.0060200000400
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------CA-...........................................................................................................................................................................................................................................................................................2516.0060000000501
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GA-...........................................................................................................................................................................................................................................................................................2515.0050000000500
...............................................................................................................................................ACAAGCACAC---------TTTGCCGGC.............................................................................................................................................................................................................................................................................................................................1915.0050500000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------A.............................................................................................................................................................................................................................................................................................2415.0050400100000
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................2415.0050500000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------C.............................................................................................................................................................................................................................................................................................2415.0050001000400
.........................................................................................................................................................................................................................TGAGAGTCTCTCTGTGCCT............................................................................................................................................................................................................................................................1915.0050500000000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------AA-...........................................................................................................................................................................................................................................................................................2315.0050400000100
droPer2
GGTAAGGGTGTTAA-------T--------------------------------TTGATGCG-----------GGC------G-CCTTC-GAG-------TGTTTAT-C-GAG---TGA-----T-----TT--ATCT-----ACAAGCACAC---------TTTGCCGGCTCAGGTACTTAGTGACTCTCAAT--------GC-TTTCGAC-ATCTTGAGAGTCTCTCTGTGCCTGCACTGGCGGTGGTGCAACTGC----A-ACG--------------------------------------------------------A-------------TTAAGGGTGT------------------------------------------------------TCCT-----------------AAT----------------AAGTGT--------------TA--TATTTAGAGTGTT--AT------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................22149916.00499167364742991342834466
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................21145389.00453891114418841607389284111
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................2114627.004627046270000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................2014043.004043040374110
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................2313874.0038741203655811170
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................2013161.00316189017927920613856
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.............................................................................................................................................................................................................................................................................................241764.007646567821000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................191759.00759502201926183
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................221610.0061042537101551
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................221348.0034803480000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AA-...........................................................................................................................................................................................................................................................................................251259.00259262285000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.......................................................................................................................................................................................................................................................................................................221245.0024562344010
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------..............................................................................................................................................................................................................................................................................................231232.0023262187100
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................201226.0022602171530
.............................................................................................................................................................................AGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................191205.002050176171020
............................................................................................................................................................................CAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................191166.0016611650000
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAC........................................................................................................................................................................................................................................................221161.0016181389060
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG.......................................................................................................................................................................................................................................................................................................221152.0015211501000
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCA.........................................................................................................................................................................................................................................................211111.0011101071210
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------..............................................................................................................................................................................................................................................................................................23185.008532476000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.............................................................................................................................................................................................................................................................................................23176.00760760000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------..............................................................................................................................................................................................................................................................................................23170.007015514000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................21168.00680680000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------..............................................................................................................................................................................................................................................................................................23166.00665582100
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCT........................................................................................................................................................................................................................................................................................................21144.00441985525
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................23140.00400400000
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGC..........................................................................................................................................................................................................................................................20133.00330320001
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCG........................................................................................................................................................................................................................................................................................................21131.003117122000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------..............................................................................................................................................................................................................................................................................................23130.00301290000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCC........................................................................................................................................................................................................................................................................................................21127.00277510311
...........................................................................................................................................................................TCAGGTACTTAGTGACTCC..........................................................................................................................................................................................................................................................................................................19126.00262510000
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAA........................................................................................................................................................................................................................................................22125.00250250000
..............................................................................................................................................................................GGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................18123.00230230000
..............................................................................................................................................................................GGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................19123.00230230000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------AA-...........................................................................................................................................................................................................................................................................................24122.00220220000
...........................................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCAC........................................................................................................................................................................................................................................................21122.00220220000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------..............................................................................................................................................................................................................................................................................................22121.00210210000
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................22121.00210192000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.............................................................................................................................................................................................................................................................................................24121.00210201000
...........................................................................................................................................................................TCAGGTACTTAGTGACTC...........................................................................................................................................................................................................................................................................................................18120.00201450100
............................................................................................................................................................................CAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................18119.00191180000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................21119.00190190000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAT.......................................................................................................................................................................................................................................................................................................21117.00170170000
.............................................................................................................................................................................AGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................18115.00150100320
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.............................................................................................................................................................................................................................................................................................24113.00133100000
...............................................................................................................................................................................GTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................18112.00120120000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA--------A.............................................................................................................................................................................................................................................................................................24111.0011290000
...........................................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCA.........................................................................................................................................................................................................................................................20110.00100100000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAG.......................................................................................................................................................................................................................................................................................................21110.00100100000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.............................................................................................................................................................................................................................................................................................24110.00100100000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.............................................................................................................................................................................................................................................................................................24110.0010280000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAGA--------..............................................................................................................................................................................................................................................................................................2319.009090000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCACA--------..............................................................................................................................................................................................................................................................................................2218.008080000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCACC--------..............................................................................................................................................................................................................................................................................................2218.008710000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------..............................................................................................................................................................................................................................................................................................2218.008080000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GC-T..........................................................................................................................................................................................................................................................................................2616.006510000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCATA--------..............................................................................................................................................................................................................................................................................................2316.006051000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTT.........................................................................................................................................................................................................................................................................................................2016.006040110
...........................................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGC..........................................................................................................................................................................................................................................................1916.006060000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAG--------..............................................................................................................................................................................................................................................................................................2216.006060000
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTG...........................................................................................................................................................................................................................................................1915.005030002
..............................................................................................................................................................................GGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................2015.005050000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCG..........................................................................................................................................................................................................................................................................................................1915.005500000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCA..........................................................................................................................................................................................................................................................................................................1914.004040000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------A.............................................................................................................................................................................................................................................................................................2414.004040000
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................2114.004021010
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAAA.......................................................................................................................................................................................................................................................2314.004040000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------GC-...........................................................................................................................................................................................................................................................................................2514.004130000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.............................................................................................................................................................................................................................................................................................2414.004220000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------TA-...........................................................................................................................................................................................................................................................................................2513.003030000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------G.............................................................................................................................................................................................................................................................................................2413.003030000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTA.........................................................................................................................................................................................................................................................................................................2013.003021000
...........................................................................................................................................................................................................................AGAGTCTCTCTGTGCCTGCAA........................................................................................................................................................................................................................................................2113.003030000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------AT-...........................................................................................................................................................................................................................................................................................2513.003030000
........................................................................................................................................CT-----ACAAGCACAC---------TTTGCCGGC.............................................................................................................................................................................................................................................................................................................................2113.003110100
..........................................................................................................................................................................................................................GAGAGTCTCTCTGTGCCTGCAAAA......................................................................................................................................................................................................................................................2413.003030000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------A.............................................................................................................................................................................................................................................................................................2213.003030000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------AA-...........................................................................................................................................................................................................................................................................................2312.002020000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------C.............................................................................................................................................................................................................................................................................................2412.002020000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------T.............................................................................................................................................................................................................................................................................................2412.002020000
droWil2
GGTGAGCAA--ATA---CCTATTAAATACTTATCC-------------------AT--------------AA-GGT------GACAAAA-AAG-------TGACTATAC-AA----AGTGA---T-----AC--GAGTTAT--CTC---TGCC---------TAA-ACAGCTCAGGTACTTAGTGACTCTCAAA--------GAATATATATAGACTTGAGAGACGCTCTGTACCTAGACTGTTG-TGT--------C----T-GCG--------------------------------------------------------G-------------A-----------------------ATGTCAACATCATGTGTGTGTGTGTGTGTGATATATAGTG----------------------------------------ACATA-------------------TTATTATAGTAAT--GG------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................2128714.5017429239575571662171244
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................2228614.0017228244056741473491751
..........................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGAC........................................................................................................................................................................................................................................................2222118.504237353511252358180
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................2021732.00346419085414825186
...........................................................................................................................................................................TCAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................1921032.502065177317217643
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................232864.00172891737086535
..........................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACT.......................................................................................................................................................................................................................................................232850.0017001364345475173
..........................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGA.........................................................................................................................................................................................................................................................212554.50110999726184325
............................................................................................................................................................................CAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................202384.507692760070
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................212259.505191515021
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------..............................................................................................................................................................................................................................................................................................232242.004841426322032
..........................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAG..........................................................................................................................................................................................................................................................202234.00468430141248
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------A.............................................................................................................................................................................................................................................................................................242218.004361122102040
...........................................................................................................................................................................................................................AGAGACGCTCTGTACCTAGACT.......................................................................................................................................................................................................................................................222190.503812679212460
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................222101.00202559413814
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCT........................................................................................................................................................................................................................................................................................................21278.501571299289
........................................................................................................................................................................................................................TTGAGAGACGCTCTGTACCTAG..........................................................................................................................................................................................................................................................22259.001181151020
...........................................................................................................................................................................................................................AGAGACGCTCTGTACCTAGA.........................................................................................................................................................................................................................................................20258.501171042056
..........................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACC.......................................................................................................................................................................................................................................................23255.501111032006
...........................................................................................................................................................................TCAGGTACTTAGTGACTCC..........................................................................................................................................................................................................................................................................................................19255.001101091000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.......................................................................................................................................................................................................................................................................................................22249.509922310433
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................20246.00921460387
.............................................................................................................................................................................AGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................19245.509135002810
..........................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGAA........................................................................................................................................................................................................................................................22244.5089782333
..........................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGG.........................................................................................................................................................................................................................................................21242.5085850000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................22241.5083082010
...........................................................................................................................................................................................................................AGAGACGCTCTGTACCTAGAC........................................................................................................................................................................................................................................................21236.00725714010
..........................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGAAA.......................................................................................................................................................................................................................................................23235.5071660113
...........................................................................................................................................................................................................................AGAGACGCTCTGTACCTAGACA.......................................................................................................................................................................................................................................................22235.0070524356
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------..............................................................................................................................................................................................................................................................................................23226.5053473111
............................................................................................................................................................................CAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................19226.0052250000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCG........................................................................................................................................................................................................................................................................................................21226.0052435031
..........................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACA.......................................................................................................................................................................................................................................................23222.50451515618
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------..............................................................................................................................................................................................................................................................................................23222.504513210110
.........................................................................................................................................................................................................................TGAGAGACGCTCTGTACCTAG..........................................................................................................................................................................................................................................................21220.0040390001
........................................................................................................................................................................................................................TTGAGAGACGCTCTGTACCT............................................................................................................................................................................................................................................................20219.5039380001
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------A.............................................................................................................................................................................................................................................................................................24219.00380240140
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------..............................................................................................................................................................................................................................................................................................23218.0036031041
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCC........................................................................................................................................................................................................................................................................................................21217.0034243043
...........................................................................................................................................................................TCAGGTACTTAGTGACTC...........................................................................................................................................................................................................................................................................................................18214.0028260020
...........................................................................................................................................................................................................................AGAGACGCTCTGTACCTAGACTGT.....................................................................................................................................................................................................................................................24213.5027141048
..........................................................................................................................................................................................................................GAGAGACGCTCTGTACCT............................................................................................................................................................................................................................................................18212.0024191022
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAT--------..............................................................................................................................................................................................................................................................................................22212.0024024000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCG..........................................................................................................................................................................................................................................................................................................19212.0024240000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT--------T.............................................................................................................................................................................................................................................................................................24211.5023017060
.........................................................................................................................................................................................................................TGAGAGACGCTCTGTACCTAGA.........................................................................................................................................................................................................................................................22211.0022153121
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG.......................................................................................................................................................................................................................................................................................................22210.502154093
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA--------A.............................................................................................................................................................................................................................................................................................23210.0020020000
............................................................................................................................................................................................................................GAGACGCTCTGTACCTAGACTGT.....................................................................................................................................................................................................................................................2329.5019100027
...........................................................................................................................................................................................................................AGAGACGCTCTGTACCTAG..........................................................................................................................................................................................................................................................1929.5019152002
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACT--------..............................................................................................................................................................................................................................................................................................2329.501976060
...........................................................................................................................................................................................................................AGAGACGCTCTGTACCTAGACC.......................................................................................................................................................................................................................................................2229.0018180000
............................................................................................................................................................................CAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................1829.0018117000
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................2329.0018020115
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------T.............................................................................................................................................................................................................................................................................................2428.5017010070
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................2228.5017111050
..........................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACG.......................................................................................................................................................................................................................................................2328.0016150010
............................................................................................................................................................................................................................GAGACGCTCTGTACCTAGAC........................................................................................................................................................................................................................................................2028.0016151000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCATT--------..............................................................................................................................................................................................................................................................................................2327.501546032
..............................................................................................................................................................................GGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................1827.5015015000
............................................................................................................................................................................................................................GAGACGCTCTGTACCTAGACT.......................................................................................................................................................................................................................................................2126.501372211
..........................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACTT......................................................................................................................................................................................................................................................2426.0012120000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAAA--------..............................................................................................................................................................................................................................................................................................2126.001204080
..........................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGT.........................................................................................................................................................................................................................................................2125.501191100
..............................................................................................................................................................................GGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................1925.0010010000
............................................................................................................................................................................................................................GAGACGCTCTGTACCTAGACTG......................................................................................................................................................................................................................................................2225.0010100000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................2125.0010010000
.........................................................................................................................................................................GCTCAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................2125.001090010
..........................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACTG......................................................................................................................................................................................................................................................2425.0010100000
.......................................................................................................................................................................CAGCTCAGGTACTTAGTGACT............................................................................................................................................................................................................................................................................................................2125.001080011
...........................................................................................................................................................................................................................AGAGACGCTCTGTACCTAGACG.......................................................................................................................................................................................................................................................2224.50980001
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAT.......................................................................................................................................................................................................................................................................................................2123.50706010
.........................................................................................................................................................................................................................TGAGAGACGCTCTGTACCT............................................................................................................................................................................................................................................................1923.50770000
.............................................................................................................................................................................AGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................1823.50704030
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG--------A.............................................................................................................................................................................................................................................................................................2423.00602040
..........................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGAAC.......................................................................................................................................................................................................................................................2323.00660000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTA.........................................................................................................................................................................................................................................................................................................2023.00601032
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAC--------..............................................................................................................................................................................................................................................................................................2223.00606000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------C.............................................................................................................................................................................................................................................................................................2422.50512020
...............................................................................................................................................................................GTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................1822.50504001
...........................................................................................................................................................................................................................AGAGACGCTCTGTACCTAGACTT......................................................................................................................................................................................................................................................2322.50520021
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------A.............................................................................................................................................................................................................................................................................................2422.50504010
.............................................................................................................................................................................................................................AGACGCTCTGTACCTAGACTGT.....................................................................................................................................................................................................................................................2222.50540001
...........................................................................................................................................................................................................................AGAGACGCTCTGTACCTAGAAA.......................................................................................................................................................................................................................................................2222.50540100
...........................................................................................................................................................................................................................AGAGACGCTCTGTACCTAGG.........................................................................................................................................................................................................................................................2022.50550000
.......................................................................................................................................................................CAGCTCAGGTACTTAGTGACTC...........................................................................................................................................................................................................................................................................................................2222.50511021
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................2122.00430010
............................................................................................................................................................................CAGGTACTTAGTGACTCTCACC--------..............................................................................................................................................................................................................................................................................................2222.00422000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC--------A.............................................................................................................................................................................................................................................................................................2422.00404000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAAT--------..............................................................................................................................................................................................................................................................................................2121.50301020
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA--------G.............................................................................................................................................................................................................................................................................................2421.50303000
.........................................................................................................................................................................GCTCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................2221.50310011
..........................................................................................................................................................................................................................GAGAGACGCTCTGTACCTAGACTA......................................................................................................................................................................................................................................................2421.50311100
........................................................................................................................................................................................................................TTGAGAGACGCTCTGTACCC............................................................................................................................................................................................................................................................2021.50330000
........................................................................................................................................................................AGCTCAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................2221.50320001
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCATC--------..............................................................................................................................................................................................................................................................................................2321.50312000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC--------T.............................................................................................................................................................................................................................................................................................2421.50310020
droVir3
GGTAAGAAA--CGT---C---------------------------------------------------GGC-CAC------CAGT---GCCGTGTCAGTTGTGCTTTT-CCG---TGC-----T-----GAACTCCT-----CCC---GCCC--TGCACACCCC-GCTGCTCAGGTACTTAGTGACTCTCAATCATCTATTGC-TTTGCAT-ACCTTGAGGGTCGCTCTGTGCCTGTGCCGCCTGTGCTGCACAACC----A-ACG--------------------------------------------------------A-------------CG-AGATGCA--------------------------TACGTGACCCTGACCGTGACCGGGAGTG----------------------------------------AAGTGT--------------AA--TAGCC--AGGATT--AG------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................221272895.002728952454118717295917123331229819712351817415258514218469394587761106145335921199510884168051752977124320252372236880520813010578806263162659849141315161031127311431191881115713381403307235628883452410324730998542884197276928073994393977392540282557746778
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................211189946.001899464336651623720644381887648014681992770452041105452212309265674241507138010595827508872725974459527141613439541992914623710542033253999399101291489171025163631151914201016901594946134102895061906919693768624202453207015952622225061532497283660346308
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA......................................................................................................................................................................................................................................................................................................23139380.0039380374390226810516451111538183520820161650102920211318691499135759240619564513863112411361164910942794814220110501110100261215101263824477048991745898895571622722824141358958713881644
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................20131429.00314293057201293324207114197951411215945725210926421713720340833152996573310337399687624721116760183994123015596087653680143326242757221129181741720194342324234810243693682981913103679503493849861029
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................22120137.00201379012066924777965231515158201233331549393213723422431631414610662138120321041461216910640133213013444232202231250173415222922252122672660622476637624158640152612911415
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGC........................................................................................................................................................................................................................................................22116013.001601323131339315813148181583694631425621101169056120525599161632175412310203710127210112327372625471081096588617377898238899172427222623571363157419252146293141415
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAA.....................................................................................................................................................................................................................................................................................................24113822.001382213424565175112100094311213505304442635103448577461434614361632540324919030000100000000000131005702352274227370218216592142106141536213289554578
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA......................................................................................................................................................................................................................................................................................................2318584.0085841535923302110013011000210015131316165422252205370509001000020001000200024000302614741540975200184174144142197743278301835898
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC......................................................................................................................................................................................................................................................................................................2316758.006758557186303212200000001301241187335465230156621200021160664254176125843411624100010423408221493507426398515705160203244414457
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT......................................................................................................................................................................................................................................................................................................2314949.00494988906019316010013112427951010850759914615854462053818628310666391101010231101010200142100811095455334201551621027714511732660111276275
...........................................................................................................................................................................TCAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................1914333.004333177654269915141200110415327124142362254404474648464142127651834626625711729622702131100221110111311233206122292181031251309764137115859228966
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTG.........................................................................................................................................................................................................................................................2111776.001776101015658836516408350001056171563315176649437256503174311222428312711200011200111110000001228130145015171369778533716111251012
............................................................................................................................................................................CAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................2011667.001667001481200000000012214220130129201113521311071810901000000000000000000001000322004022000135
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC......................................................................................................................................................................................................................................................................................................2311649.00164913118314230000000011000431357128191041842362482110002010010100000401001362272371874346262351441004963157166
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCC........................................................................................................................................................................................................................................................................................................2111442.0014421751760915172012100005142198268433714253444465140511011210010203600000010100002100234100033231141317202330271035811
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................2111261.001261027923001000000024212202504137585525123212303452193210000000000000000000000000212137303210311
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.......................................................................................................................................................................................................................................................................................................2211215.001215333276470100021137399026773835685853652672251326337302190000000000010000000150024347076576131361284310152336
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................2011154.0011541159114470000012165667510131044767772116611217465866788684334900000000000000000001500223235202427030112
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACAA.....................................................................................................................................................................................................................................................................................................2411020.0010200014310000000000000002004151322161111280202743231000000000000000000000000023111611608445287106732338682
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATA.....................................................................................................................................................................................................................................................................................................241979.009790081000000000002000000035101071313111413674010120011100000000010000722272261413220237112306776
.............................................................................................................................................................................AGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................191758.0075810940738010413015927396111520313130372615113636443834139840000000000000001000250022814303222412011
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAACA.....................................................................................................................................................................................................................................................................................................241731.00731101000000000100000000001010000022031086200022101110000000000000010131164762922205035348592
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCT.......................................................................................................................................................................................................................................................231716.007161281030100010000002001001101000100000011000053252201002031160011120321251141017610511311011
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACCA.....................................................................................................................................................................................................................................................................................................241599.0059911210000000000010000000010001200010223000000000000000000010000001111139532100153531439068
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCT........................................................................................................................................................................................................................................................................................................211584.0058430523001441010000784554282322561020102126755168000001000010100000009000257553987911145165101433
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCC.......................................................................................................................................................................................................................................................231553.005536374043000010000010004110000002030300000000094410423110100122860000000395267466412000100
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATT.....................................................................................................................................................................................................................................................................................................241494.0049402740000001000110002020213657324401311310200102011112211103000161273947429914147842340
...........................................................................................................................................................................TCAGGTACTTAGTGACT............................................................................................................................................................................................................................................................................................................171439.00439000000000000000000000000000000000000000000101000202210034170000121146437700000088695766
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................231427.00427005100000000003013310873422456452395301903042342431000000000000000000000000020000000001110
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAT.....................................................................................................................................................................................................................................................................................................241327.00327015200000000110100010003541159439818148111000000000000000000000005647512195718620741013
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCT............................................................................................................................................................................................................................................................181316.003162920001020000000000000040001000000000010000010100010000000000000000040723944524400000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG......................................................................................................................................................................................................................................................................................................231244.0024400131010000001000000000004223002311410200000000000000000000010008633281310512611210672223
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................221211.00211001510000000000310412027014926121710514100141891030000000000000000000000000021000100000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTC...........................................................................................................................................................................................................................................................................................................181193.0019312851611120000003101000337517414323141422500000001000000000010101030111715878410011
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTG...........................................................................................................................................................................................................................................................191176.001760330101020000000000000013116010000000120000301123011010000000001011032241920152400000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACCT.....................................................................................................................................................................................................................................................................................................241172.00172510000000000000000000000000001110000110010000010000000000100000201117131212877168551322
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG.......................................................................................................................................................................................................................................................................................................221171.00171311326110000000000000300556931512518873520000000000000000000000010995141001035359
............................................................................................................................................................................CAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................191149.00149101190000000000000001002101131121230032200000000000000000000000000000010000010001
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAAA......................................................................................................................................................................................................................................................................................................211141.001410070100000000011000010036739430993101519661000000000000000000000006320020013000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCG........................................................................................................................................................................................................................................................................................................211138.001381518531010000001030110021181132306005821120000000000000000000100011347130221210022
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA......................................................................................................................................................................................................................................................................................................221134.0013400780000000000000000000001174700460636410000000000000000000000002011000110000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAACT.....................................................................................................................................................................................................................................................................................................241124.001241120000000000000000000000010300400000100000000000010000000000000098811777912833513
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGG........................................................................................................................................................................................................................................................221123.001239171040400000000000000000000000010010116000010000000000000004230000000864041000000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCC..........................................................................................................................................................................................................................................................................................................191116.00116178502000000000000000010000000100200000012000000000000000000001000000000001120000
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGT........................................................................................................................................................................................................................................................221106.001060031233010201010000000295234011521010221000000001000000000062101204242236603021
.............................................................................................................................................................................AGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................18196.00960150102000001021022035074412123631678180000000000000000000001000010100030000100
.........................................................................................................................................................................................................................TGAGGGTCGCTCTGTGCCTGTG.........................................................................................................................................................................................................................................................22188.00881121322090503110101011121148000010243020000000000000000000001000143103111310121
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATCATC..................................................................................................................................................................................................................................................................................................27187.008710000000000010000000000011010001001000000001000000000000000000010161112524000332227
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTA.........................................................................................................................................................................................................................................................................................................20179.0079004000400000000000000010001001011042523100000000000000000001001022110000000521519
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................21175.007500620000000000000000001000320001100000000000000000000000000000000000121000000001
.................................................................................................................................................C---GCCC--TGCACACCCC-GCTGC.............................................................................................................................................................................................................................................................................................................................20167.0067007200000000000000000000000010000000001000000000010100000002000020001653810700001
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATC.....................................................................................................................................................................................................................................................................................................24166.00663017001000000000000020000000512100000000000001010000110001100000074324412012232
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAAT....................................................................................................................................................................................................................................................................................................25162.006210200000000000000000000004410010102321000000000000000000000000010811320010152222
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGA........................................................................................................................................................................................................................................................22160.00601021100010000000000000010210010100021020000000000000000000002102326420102243225
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCATC......................................................................................................................................................................................................................................................................................................23157.005770430000000000010000000010001092600000000000000000000000000000000022001041011110
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAAA......................................................................................................................................................................................................................................................................................................24157.0057002000000000000000000010038103202505113101000000000000000000000000000000000000000
...............................................................................................................................................................................GTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................18155.00550030100000000021000100002332130010111020000000000000000000000003047100000030135
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCATA......................................................................................................................................................................................................................................................................................................23154.00541002100000000000000000011100330220200210000000000000000000000000099520101210110
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAAAA.....................................................................................................................................................................................................................................................................................................22153.00530010000000000000000000006420120320588330000000000000000000000002020000000010000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCCC.......................................................................................................................................................................................................................................................................................................22148.004841103010000000010031421100000011001000011000000000000100000000000002400020020000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................20146.00460040010000000001000111121202100211230101000000000000000000000001511023310000000
.........................................................................................................................................................................................................................TGAGGGTCGCTCTGTGCCT............................................................................................................................................................................................................................................................19142.00420300000011000000000000000000000000000012000000000000000000000000001017765700000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAG.....................................................................................................................................................................................................................................................................................................24141.00410021000000000000000000000100000100030110000000000000000000000000097211001002125
.........................................................................................................................................................................................................................TGAGGGTCGCTCTGTGCCTGT..........................................................................................................................................................................................................................................................21139.00390010020030100011000000120014100111011120000000000000000000011000023100001010021
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAAA.....................................................................................................................................................................................................................................................................................................23139.003900260000000000000000000002001010000031100000000000000000000000000010000002100000
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGT..........................................................................................................................................................................................................................................................20137.00371010001000100000000102104121300310010010000000000000000000001001121001111001010
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTT.........................................................................................................................................................................................................................................................................................................20136.00360210100000000001000001031210211310064210000000000000000000000000010000000000010
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACG......................................................................................................................................................................................................................................................................................................23135.00353010000000000000000000000000010000100000000000000000000000000000266300101121213
...........................................................................................................................................................................................................................AGGGTCGCTCTGTGCCTGTGC........................................................................................................................................................................................................................................................21135.003500201000000000000000000000010001000000000000000000000000000012002000221110000000
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................21134.00340010000000000021010000112220220120424120000000000000000000001000000000000000000
................................................................................................................................................................................TACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................17131.00310000000000000000000000000000000000000000000000000000000000001002244300000080043
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCA.......................................................................................................................................................................................................................................................23130.00300040000010000000000000000000000000000000000000000000000000000010002054714000010
............................................................................................................................................................................CAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................18129.002900250000000000000000000100000200100000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCCC......................................................................................................................................................................................................................................................24129.00298000000000000000000000000000000100000000000000000000000000010000000036224200000
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTT.........................................................................................................................................................................................................................................................21128.00280000000000000000010001001000000000000000000000000000000000000000000034724500000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAAC....................................................................................................................................................................................................................................................................................................25127.00270020000000000000000000000000000000000000000000000000000000000001054600000040221
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATCA....................................................................................................................................................................................................................................................................................................25127.00270011000000000000000000000000000000000000000000000000000000000000024212101501132
................................................................................................................................................CC---GCCC--TGCACACCCC-GCTGC.............................................................................................................................................................................................................................................................................................................................21126.00261001000000000000000000000000010000000000000000000000000000100000100072025500000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCAA.........................................................................................................................................................................................................................................................................................................20225.00500000000000000000000001010334212140182300000000000000000000000000503001002020100
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCTT......................................................................................................................................................................................................................................................24125.00251000000000000000000100000000000000000000000000000000000000000000000032338400000
.................................................................................................................................................................................................TCATCTATTGC-TTTGCAT-ACCTT..............................................................................................................................................................................................................................................................................23124.00240031000000000000000000102410000020000000000000000000000000000005400000000000010
...........................................................................................................................................................................................................................AGGGTCGCTCTGTGCCTGTGCT.......................................................................................................................................................................................................................................................22124.00240000000000000000000000000001000000000000000001000111000000000000000021635200000
droMoj3
GGTAAGAAC--TCA-----------------------------------------------------------GGC------T-CCATC--AA-------TATAGCTAGAGAG---TGC-----C-----CG--ATTC-----ATGA-TGTCC--AGCACACGCT-GCAGCTCAGGTACTTAGTGACTCTCAATCACATATTGC-TTTGCAT-ACTTTGAGGGTCGCTCTGTGCCTGTGCCGCCCGTGTTGCACACAGCCACA-CAATTGTGAATTCGAGTTCGAACTCCCCGGACTAGAGAATACAAGTGCAAGTGTCTTGTA-------------A-------------------------------------------------------------------------------------------------------------------TGTAAA-------------CGTGTTTTT-AAATATSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................21149212.004921222712252526128423326104
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................22127227.002722714693157726641910170102
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................2018978.0089782067150101142648830
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................2213124.00312488483242121102
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGC........................................................................................................................................................................................................................................................2212579.0025792089816543119092
............................................................................................................................................................................CAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................2012226.0022262185502340
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA......................................................................................................................................................................................................................................................................................................2312119.0021191495807105198
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................2111467.001467145810080
...........................................................................................................................................................................TCAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................191813.008135491324182081
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAA.....................................................................................................................................................................................................................................................................................................241629.00629549915641
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA......................................................................................................................................................................................................................................................................................................231485.0048515016013180
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT......................................................................................................................................................................................................................................................................................................231445.0044515112032763
............................................................................................................................................................................CAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................191221.00221209000120
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC......................................................................................................................................................................................................................................................................................................231192.00192364001520
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACC......................................................................................................................................................................................................................................................................................................231178.0017886101630
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTG.........................................................................................................................................................................................................................................................211160.0016045392812306
.............................................................................................................................................................................AGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................191150.001501003811100
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGG........................................................................................................................................................................................................................................................221149.0014901412600
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAA......................................................................................................................................................................................................................................................................................................221147.0014714700000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCT........................................................................................................................................................................................................................................................................................................211139.00139524410690
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.......................................................................................................................................................................................................................................................................................................221129.0012953115672
....................................................................................................................................................TGTCC--AGCACACGCT-GCAGC.............................................................................................................................................................................................................................................................................................................................201106.0010613000930
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACAA.....................................................................................................................................................................................................................................................................................................24188.00888210050
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................21186.00868600000
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................20186.008663121730
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCC........................................................................................................................................................................................................................................................................................................21172.00721625111190
...........................................................................................................................................................................TCAGGTACTTAGTGACTCC..........................................................................................................................................................................................................................................................................................................19170.00700000700
............................................................................................................................................................................CAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................18158.00585800000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAAA.....................................................................................................................................................................................................................................................................................................23149.00494700020
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................22143.004316200250
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCC.......................................................................................................................................................................................................................................................23143.00430364300
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCG........................................................................................................................................................................................................................................................................................................21137.00377411231
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATT.....................................................................................................................................................................................................................................................................................................24135.00357300250
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAG.......................................................................................................................................................................................................................................................................................................22133.00332431050
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAACA.....................................................................................................................................................................................................................................................................................................24131.003111100190
..................................................................................................................................................A-TGTCC--AGCACACGCT-GCAGC.............................................................................................................................................................................................................................................................................................................................21129.00292000270
...........................................................................................................................................................................................................................AGGGTCGCTCTGTGCCTGTGC........................................................................................................................................................................................................................................................21123.00231710050
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGT........................................................................................................................................................................................................................................................22122.00221141330
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACCA.....................................................................................................................................................................................................................................................................................................24122.00225000170
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTA.........................................................................................................................................................................................................................................................................................................20120.00201700030
...........................................................................................................................................................................TCAGGTACTTAGTGACTC...........................................................................................................................................................................................................................................................................................................18120.00207000130
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAG......................................................................................................................................................................................................................................................................................................23119.00191500040
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATA.....................................................................................................................................................................................................................................................................................................24118.0018900090
.............................................................................................................................................................................AGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................18118.0018641070
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................23117.00171310030
..............................................................................................................................................................................GGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................18116.00161400020
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAT.....................................................................................................................................................................................................................................................................................................24114.00143000110
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAT......................................................................................................................................................................................................................................................................................................22113.00131300000
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................21111.0011300080
..............................................................................................................................................................................GGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................19110.00101000000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCACAA.....................................................................................................................................................................................................................................................................................................23110.00101000000
............................................................................................................................................................................CAGGTACTTAGTGACTCTCACA......................................................................................................................................................................................................................................................................................................2219.009900000
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATC.....................................................................................................................................................................................................................................................................................................2419.009200061
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCATC......................................................................................................................................................................................................................................................................................................2317.007401020
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTT.........................................................................................................................................................................................................................................................................................................2017.007100060
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................2017.007410110
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCCC.......................................................................................................................................................................................................................................................................................................2217.007321010
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACCT.....................................................................................................................................................................................................................................................................................................2416.006010050
.........................................................................................................................................................................................................................TGAGGGTCGCTCTGTGCCTGTG.........................................................................................................................................................................................................................................................2216.006130020
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGCT.......................................................................................................................................................................................................................................................2316.006120030
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGA........................................................................................................................................................................................................................................................2215.005100031
.................................................................................................................................................................................................TCACATATTGC-TTTGCAT-ACTTT..............................................................................................................................................................................................................................................................................2315.005100040
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCATA......................................................................................................................................................................................................................................................................................................2315.005100040
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAACT.....................................................................................................................................................................................................................................................................................................2415.005000050
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAAA......................................................................................................................................................................................................................................................................................................2115.005500000
............................................................................................................................................................................................................................GGGTCGCTCTGTGCCTGTGC........................................................................................................................................................................................................................................................2014.004200020
...........................................................................................................................................................................TCAGGTACTTAGTGACTCAA.........................................................................................................................................................................................................................................................................................................2014.004110020
droGri2
GGTAAGCCC--AGAGAGAG--A----TA-------AAAAAGCGAAAGATTCGTTC-GT------CGATTGGT-TCT------TATT---CTTGTGTTAAT---CATTAT-CAG---TGTTAAATGTGGAAAAACCAAT-----CC-AATCCGC--TGCACACGTT-GCTGCTCAGGTACTTAGTGACTCTCAATTCAACATTGT-ATTGCACGCCTTTGAGGGTCGCTCTGTGCCTGTGTTGCACGTGTTGCATTCAC----A-CCA--------------------------------------------------------T--------------C-CGAGTGATTTGTGTCCTTTGAGTGT------------------------------------CGATTTGTGTTACATCTAT---------------------ACGGT-------------------TATTTAAAGTGCT--TC------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................2111712.001712169715
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................221530.0053051812
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................201204.002042022
............................................................................................................................................................................CAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................201185.001851850
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................22184.0084840
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGT........................................................................................................................................................................................................................................................22168.0068608
...........................................................................................................................................................................TCAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................19165.0065650
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................21149.0049490
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTG.........................................................................................................................................................................................................................................................21117.0017161
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCT........................................................................................................................................................................................................................................................................................................21115.0015141
............................................................................................................................................................................CAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................19114.0014140
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAA......................................................................................................................................................................................................................................................................................................23112.0012120
.................................................................................................................................................................................................TTCAACATTGT-ATTGCACGCCTTT..............................................................................................................................................................................................................................................................................2419.00990
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAC.......................................................................................................................................................................................................................................................................................................2117.00770
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAT.......................................................................................................................................................................................................................................................................................................2217.00770
.............................................................................................................................................................................AGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................1917.00770
............................................................................................................................................................................CAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................1815.00550
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAT......................................................................................................................................................................................................................................................................................................2315.00550
...........................................................................................................................................................................................................................AGGGTCGCTCTGTGCCTGTGT........................................................................................................................................................................................................................................................2115.00550
.................................................................................................................................................................................................TTCAACATTGT-ATTGCACGCCTT...............................................................................................................................................................................................................................................................................2314.00440
.............................................................................................................................................................................AGGTACTTAGTGACTCTCAA.......................................................................................................................................................................................................................................................................................................2013.00330
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAC......................................................................................................................................................................................................................................................................................................2313.00330
............................................................................................................................................................................CAGGTACTTAGTGACTCTCT........................................................................................................................................................................................................................................................................................................2013.00330
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATT.....................................................................................................................................................................................................................................................................................................2413.00330
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................2212.00220
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTG...........................................................................................................................................................................................................................................................1912.00220
.............................................................................................................................................................................AGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................1812.00220
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTG.........................................................................................................................................................................................................................................................................................................2011.00110
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCT............................................................................................................................................................................................................................................................1811.00110
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAT......................................................................................................................................................................................................................................................................................................2211.00110
...........................................................................................................................................................................TCAGGTACTTAGTGACTT...........................................................................................................................................................................................................................................................................................................1811.00110
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCC........................................................................................................................................................................................................................................................................................................2111.00110
........................................................................................................................................................................TGCTCAGGTACTTAGTGACT............................................................................................................................................................................................................................................................................................................2011.00110
.................................................................................................................................................................................................TTCAACATTGT-ATTGCACGCCT................................................................................................................................................................................................................................................................................2211.00110
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCACA......................................................................................................................................................................................................................................................................................................2311.00110
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCTC.........................................................................................................................................................................................................................................................................................................2111.00110
...........................................................................................................................................................................TCAGGTACTTAGTGACTC...........................................................................................................................................................................................................................................................................................................1811.00110
............................................................................................................................................................................CAGGTACTTAGTGACTCTCAAAAA....................................................................................................................................................................................................................................................................................................2411.00110
........................................................................................................................................................................................................................TTGAGGGTCGCTCTGTGCCT............................................................................................................................................................................................................................................................2011.00101
..........................................................................................................................................................................CTCAGGTACTTAGTGACTCT..........................................................................................................................................................................................................................................................................................................2011.00110
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGTT.......................................................................................................................................................................................................................................................2311.00110
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATTC....................................................................................................................................................................................................................................................................................................2511.00110
...........................................................................................................................................................................TCAGGTACTTAGTGACTCG..........................................................................................................................................................................................................................................................................................................1911.00110
...........................................................................................................................................................................................................................AGGGTCGCTCTGTGCCTGTG.........................................................................................................................................................................................................................................................2011.00110
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAGG.....................................................................................................................................................................................................................................................................................................2411.00110
...................................................................................................................................................................................................................CGCCTTTGAGGGTCGCTCTG.................................................................................................................................................................................................................................................................2011.00110
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTGTTT......................................................................................................................................................................................................................................................2411.00110
.....................................................................................................................................................................................................................CCTTTGAGGGTCGCTCTGT................................................................................................................................................................................................................................................................1911.00110
..........................................................................................................................................................................................................................GAGGGTCGCTCTGTGCCTGTT.........................................................................................................................................................................................................................................................2111.00110
..............................................................................................................................................................................GGTACTTAGTGACTCTCA........................................................................................................................................................................................................................................................................................................1811.00110
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAAAA.....................................................................................................................................................................................................................................................................................................2411.00110
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAATGG....................................................................................................................................................................................................................................................................................................2511.00110
...........................................................................................................................................................................TCAGGTACTTAGTGACTCTCAGCA.....................................................................................................................................................................................................................................................................................................2420.50110

Generated: 10/20/2015 at 07:32 PM