ID:

dan-mir-286

 Coordinate:

scaffold_13266:9731359-9731461 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.3 -31.4 -31.4

Flybase annnotation

utr3 [utr3_minus_3618]; pre_miRNA [Dana\mir-286-RM]; miRNA [Dana\miR-286-RA]

No Repeatable elements found

Sense Strand Reads

CAACGAAGAATCAATTCATCAAATTGTAAGTGATTTTTAGCATCAGAATTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTCACAAAAAAATTGGTTACCAACAAGCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGCTAAAGTGACTTGGAAATGTAAAGTTTCAAATAATATAC

***********************************************((((((((((((....((((.(((((((.((((((((((............(((........)))..)))))))))).)))).))).))))....))))))))))))..*********************************************** 		Read size # Mismatch Hit Count Total Norm Total M058

embryo

 V039

embryo

 M044

female body

 V106

head

 V055

head

 V105

male body
......................................................................................................................TGACTAGACCGAACACTCGTGCT.............................................................. 23 0 1 41249.00 41249 28095 12113 612 330 56 43
......................................................................................................................TGACTAGACCGAACACTCGTGCC.............................................................. 23 1 1 7839.00 7839 7807 29 1 2 0 0
......................................................................................................................TTACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 7611.00 7611 7576 35 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTGC............................................................... 22 0 1 4133.00 4133 3229 807 67 26 1 3
......................................................................................................................TTACTAGACCGAACACTCGTGCC.............................................................. 23 2 1 2038.00 2038 2037 1 0 0 0 0
......................................................................................................................TGATTAGACCGAACACTCGTGCT.............................................................. 23 1 1 1330.00 1330 1320 10 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCGTGC............................................................... 22 1 1 903.00 903 901 2 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTGCTT............................................................. 24 1 1 568.00 568 431 111 19 4 2 1
......................................................................................................................TGACTAGACCGAACACTCGTG................................................................ 21 0 1 376.00 376 251 89 22 9 5 0
......................................................................................................................TGATTAGACCGAACACTCGTGCC.............................................................. 23 2 1 336.00 336 336 0 0 0 0 0
......................................................................................................................TTATTAGACCGAACACTCGTGCT.............................................................. 23 2 1 260.00 260 260 0 0 0 0 0
......................................................................................................................TGACTAGACCGCACACTCGTGCT.............................................................. 23 1 1 200.00 200 27 172 0 0 1 0
......................................................................................................................TGACTAGACCGAACACTCGCGCT.............................................................. 23 1 1 198.00 198 44 151 1 0 2 0
......................................................................................................................TAACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 152.00 152 141 11 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTTCT.............................................................. 23 1 1 149.00 149 38 105 1 5 0 0
......................................................................................................................TGACTATACCGAACACTCGTGCT.............................................................. 23 1 1 146.00 146 75 68 0 2 0 1
......................................................................................................................TGACTAGACCGACCACTCGTGCT.............................................................. 23 1 1 145.00 145 123 21 0 0 0 1
......................................................................................................................TGATTAGACCGAACACTCGTGC............................................................... 22 1 1 140.00 140 139 1 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTGAC.............................................................. 23 2 1 134.00 134 134 0 0 0 0 0
......................................................................................................................TGACTAGACCGAACCCTCGTGCT.............................................................. 23 1 1 131.00 131 81 50 0 0 0 0
......................................................................................................................TCACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 125.00 125 113 11 0 1 0 0
......................................................................................................................TGACTAGACCCAACACTCGTGCT.............................................................. 23 1 1 117.00 117 4 113 0 0 0 0
......................................................................................................................TGCCTAGACCGAACACTCGTGCT.............................................................. 23 1 1 116.00 116 109 7 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCGTGCTT............................................................. 24 2 1 108.00 108 108 0 0 0 0 0
......................................................................................................................TGACTAGCCCGAACACTCGTGCT.............................................................. 23 1 1 105.00 105 95 9 0 1 0 0
......................................................................................................................TGACTAGACCGAACACTCGGGCT.............................................................. 23 1 1 98.00 98 59 39 0 0 0 0
......................................................................................................................TGACTAGACCGAACATTCGTGCT.............................................................. 23 1 1 87.00 87 83 4 0 0 0 0
......................................................................................................................CGACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 80.00 80 60 20 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTGAT.............................................................. 23 1 1 78.00 78 65 9 1 2 1 0
......................................................................................................................TGACTAGACCGAACACTCTTGCT.............................................................. 23 1 1 75.00 75 35 38 1 1 0 0
......................................................................................................................TGACTAGACCAAACACTCGTGCT.............................................................. 23 1 1 75.00 75 53 21 0 1 0 0
......................................................................................................................TTATTAGACCGAACACTCGTGCC.............................................................. 23 3 1 74.00 74 74 0 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCGTG................................................................ 21 1 1 72.00 72 71 1 0 0 0 0
......................................................................................................................GGACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 72.00 72 51 19 2 0 0 0
......................................................................................................................TGACTAGACCGAACACTCCTGCT.............................................................. 23 1 1 71.00 71 2 69 0 0 0 0
.....................................................................................................................CTGACTAGACCGAACACTCGTGCT.............................................................. 24 1 1 71.00 71 61 9 1 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTGT............................................................... 22 1 1 70.00 70 36 33 0 1 0 0
......................................................................................................................TGACTAGACCGAACACTCGT................................................................. 20 0 1 70.00 70 23 36 1 5 0 5
.......................................................................................................................GACTAGACCGAACACTCGTGCT.............................................................. 22 0 1 70.00 70 14 7 49 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTGTT.............................................................. 23 1 1 68.00 68 39 26 3 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTGCG.............................................................. 23 1 1 67.00 67 46 21 0 0 0 0
......................................................................................................................TTACTAGCCCGAACACTCGTGCT.............................................................. 23 2 1 65.00 65 65 0 0 0 0 0
......................................................................................................................TGACTAGAACGAACACTCGTGCT.............................................................. 23 1 1 64.00 64 45 10 8 1 0 0
......................................................................................................................TGACTAGACCGAACACGCGTGCT.............................................................. 23 1 1 60.00 60 11 49 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTGCTC............................................................. 24 1 1 60.00 60 50 9 1 0 0 0
......................................................................................................................TGACTAGACTGAACACTCGTGCT.............................................................. 23 1 1 59.00 59 41 18 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTCCT.............................................................. 23 1 1 57.00 57 7 49 0 1 0 0
......................................................................................................................TGACTAGACCTAACACTCGTGCT.............................................................. 23 1 1 57.00 57 1 56 0 0 0 0
......................................................................................................................TGACTGGACCGAACACTCGTGCT.............................................................. 23 1 1 56.00 56 51 4 0 1 0 0
......................................................................................................................TGACTAGACCGAACACTCGAGCT.............................................................. 23 1 1 52.00 52 25 26 1 0 0 0
......................................................................................................................TGACTAGACCGAACACCCGTGCT.............................................................. 23 1 1 51.00 51 17 34 0 0 0 0
......................................................................................................................TGGCTAGACCGAACACTCGTGCT.............................................................. 23 1 1 47.00 47 15 30 1 1 0 0
......................................................................................................................TTACTAGACCGACCACTCGTGCT.............................................................. 23 2 1 47.00 47 47 0 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTACT.............................................................. 23 1 1 46.00 46 14 30 0 2 0 0
......................................................................................................................TGACTAGACCGAACACTCGTGCTA............................................................. 24 0 1 45.00 45 35 8 2 0 0 0
......................................................................................................................TGACTAGACCGAACACTTGTGCT.............................................................. 23 1 1 45.00 45 24 19 0 2 0 0
......................................................................................................................TTACTAGACCGAACACTCGTGAC.............................................................. 23 3 1 44.00 44 44 0 0 0 0 0
......................................................................................................................TTATTAGACCGAACACTCGTGC............................................................... 22 2 1 42.00 42 42 0 0 0 0 0
..............................................................GGCGATTGTCGGTATGGTCGCT....................................................................................................................... 22 0 1 38.00 38 34 3 1 0 0 0
......................................................................................................................TAACTAGACCGAACACTCGTGCC.............................................................. 23 2 1 38.00 38 37 1 0 0 0 0
......................................................................................................................TGCCTAGACCGAACACTCGTGCC.............................................................. 23 2 1 38.00 38 38 0 0 0 0 0
......................................................................................................................TGACTAGACCGAACATTCGTGCC.............................................................. 23 2 1 36.00 36 36 0 0 0 0 0
......................................................................................................................TGACTAGAGCGAACACTCGTGCT.............................................................. 23 1 1 34.00 34 2 3 28 0 1 0
......................................................................................................................TGACTAGACCGAACACTCG.................................................................. 19 0 1 33.00 33 31 1 1 0 0 0
......................................................................................................................GTACTAGACCGAACACTCGTGCT.............................................................. 23 2 1 33.00 33 33 0 0 0 0 0
........................................................................................................................ACTAGACCGAACACTCGTGCT.............................................................. 21 0 1 32.00 32 19 7 4 2 0 0
......................................................................................................................TTACTATACCGAACACTCGTGCT.............................................................. 23 2 1 32.00 32 32 0 0 0 0 0
......................................................................................................................TGACTACACCGAACACTCGTGCT.............................................................. 23 1 1 32.00 32 6 26 0 0 0 0
......................................................................................................................TGACTAGACCGACCACTCGTGCC.............................................................. 23 2 1 31.00 31 30 1 0 0 0 0
......................................................................................................................CTACTAGACCGAACACTCGTGCT.............................................................. 23 2 1 31.00 31 30 1 0 0 0 0
......................................................................................................................TGACTAGACCGGACACTCGTGCT.............................................................. 23 1 1 31.00 31 6 25 0 0 0 0
......................................................................................................................TGACTAGGCCGAACACTCGTGCT.............................................................. 23 1 1 31.00 31 12 18 0 1 0 0
......................................................................................................................TGACTAGCCCGAACACTCGTGCC.............................................................. 23 2 1 30.00 30 30 0 0 0 0 0
......................................................................................................................AGACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 30.00 30 21 9 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCGTGAT.............................................................. 23 2 1 30.00 30 30 0 0 0 0 0
......................................................................................................................TCACTAGACCGAACACTCGTGCC.............................................................. 23 2 1 30.00 30 30 0 0 0 0 0
......................................................................................................................TGACTAGACCGTACACTCGTGCT.............................................................. 23 1 1 28.00 28 2 26 0 0 0 0
..............................................................GGCGATTGTCGGTATGGTCGC........................................................................................................................ 21 0 1 28.00 28 26 0 1 1 0 0
......................................................................................................................TGACTAGACCGAATACTCGTGCT.............................................................. 23 1 1 28.00 28 19 8 0 1 0 0
......................................................................................................................TGACTAGACCGAGCACTCGTGCT.............................................................. 23 1 1 28.00 28 11 16 0 1 0 0
......................................................................................................................TGACTAGATCGAACACTCGTGCT.............................................................. 23 1 1 26.00 26 5 14 7 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTAC............................................................... 22 1 1 26.00 26 20 5 0 1 0 0
......................................................................................................................ATACTAGACCGAACACTCGTGCT.............................................................. 23 2 1 25.00 25 24 0 0 0 0 1
......................................................................................................................TTCCTAGACCGAACACTCGTGCT.............................................................. 23 2 1 24.00 24 22 2 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTAGTGCT.............................................................. 23 1 1 23.00 23 3 15 0 4 0 1
......................................................................................................................TTACTAGACCGAACATTCGTGCT.............................................................. 23 2 1 23.00 23 23 0 0 0 0 0
......................................................................................................................TGACTAGACCGAACAATCGTGCT.............................................................. 23 1 1 22.00 22 1 21 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTGA............................................................... 22 1 1 22.00 22 20 1 0 1 0 0
......................................................................................................................TGACTAGACCGAACACTCGTGCA.............................................................. 23 1 1 22.00 22 16 5 0 0 1 0
......................................................................................................................TGACTAGACCGAACACTCATGCT.............................................................. 23 1 1 22.00 22 4 17 1 0 0 0
......................................................................................................................TGACCAGACCGAACACTCGTGCT.............................................................. 23 1 1 21.00 21 11 10 0 0 0 0
......................................................................................................................TGACTAGACCGAACCCTCGTGCC.............................................................. 23 2 1 20.00 20 17 3 0 0 0 0
......................................................................................................................TGACTAGACCGAACGCTCGTGCT.............................................................. 23 1 1 20.00 20 8 12 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGCTCT.............................................................. 23 2 1 20.00 20 1 19 0 0 0 0
......................................................................................................................TGACTGGACCGAACACTCGTGCC.............................................................. 23 2 1 19.00 19 19 0 0 0 0 0
......................................................................................................................TGACTAGACCCAACACTCGTACT.............................................................. 23 2 1 19.00 19 0 19 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCTTGCT.............................................................. 23 2 1 18.00 18 17 1 0 0 0 0
......................................................................................................................TGACTAGACCGATCACTCGTGCT.............................................................. 23 1 1 17.00 17 2 15 0 0 0 0
......................................................................................................................TTACTAGACCAAACACTCGTGCT.............................................................. 23 2 1 17.00 17 16 1 0 0 0 0
..............................................................GGCGATTGTCGGTATGGTCGCC....................................................................................................................... 22 1 1 17.00 17 17 0 0 0 0 0
......................................................................................................................TTACTAGACCGAACCCTCGTGCT.............................................................. 23 2 1 17.00 17 17 0 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCGTGTT.............................................................. 23 2 1 17.00 17 17 0 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCGTGT............................................................... 22 2 1 16.00 16 16 0 0 0 0 0
......................................................................................................................TTACTAGCCCGAACACTCGTGCC.............................................................. 23 3 1 16.00 16 16 0 0 0 0 0
......................................................................................................................GGACTAGACCGAACACTCGTGCC.............................................................. 23 2 1 16.00 16 15 1 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGGGCC.............................................................. 23 2 1 16.00 16 16 0 0 0 0 0
..............................................................GTCGATTGTCGGTATGGTCGCT....................................................................................................................... 22 1 1 16.00 16 16 0 0 0 0 0
......................................................................................................................TGACTATACCGAACACTCGTGC............................................................... 22 1 1 15.00 15 10 5 0 0 0 0
......................................................................................................................TGACTAGACCGACCACTCGTGC............................................................... 22 1 1 15.00 15 13 2 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCGTGCG.............................................................. 23 2 1 15.00 15 14 1 0 0 0 0
.......................................................................................................................GACTAGACCGAACACTCGTGC............................................................... 21 0 1 15.00 15 3 1 11 0 0 0
.....................................................................................................................CTGACTAGACCGAACACTCGTGCC.............................................................. 24 2 1 14.00 14 14 0 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCGGGCT.............................................................. 23 2 1 14.00 14 13 1 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGCGCC.............................................................. 23 2 1 14.00 14 11 3 0 0 0 0
......................................................................................................................TGACTTGACCGAACACTCGTGCT.............................................................. 23 1 1 14.00 14 12 2 0 0 0 0
......................................................................................................................TGACTAGACCGAACCCTCGTGC............................................................... 22 1 1 14.00 14 9 5 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGCGC............................................................... 22 1 1 14.00 14 3 11 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTTC............................................................... 22 1 1 13.00 13 3 9 0 1 0 0
......................................................................................................................TGACTAAACCGAACACTCGTGCT.............................................................. 23 1 1 13.00 13 3 9 0 1 0 0
......................................................................................................................TGATTATACCGAACACTCGTGCT.............................................................. 23 2 1 13.00 13 13 0 0 0 0 0
......................................................................................................................TGACTAGAACGAACACTCGTGCC.............................................................. 23 2 1 13.00 13 13 0 0 0 0 0
......................................................................................................................TGACTAGAACGAACACTCGTGC............................................................... 22 1 1 13.00 13 8 3 2 0 0 0
......................................................................................................................TGACTAGACCGCACACTCGTGC............................................................... 22 1 1 13.00 13 4 9 0 0 0 0
......................................................................................................................TGACTCGACCGAACACTCGTGCT.............................................................. 23 1 1 13.00 13 1 11 0 1 0 0
......................................................................................................................TGACTAGACCGAACACTCTTGCC.............................................................. 23 2 1 13.00 13 12 1 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTGGT.............................................................. 23 1 1 12.00 12 4 8 0 0 0 0
......................................................................................................................TGACTAGCCCGAACACTCGTGAT.............................................................. 23 2 1 12.00 12 12 0 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTGCTTT............................................................ 25 1 1 12.00 12 10 0 1 1 0 0
......................................................................................................................TTACTAGACCGAACACTCGCGCT.............................................................. 23 2 1 12.00 12 11 1 0 0 0 0
......................................................................................................................TGATTAGACCGAACACTCGTGCTT............................................................. 24 2 1 12.00 12 12 0 0 0 0 0
......................................................................................................................TGCCTAGACCGAACACTCGTGC............................................................... 22 1 1 12.00 12 12 0 0 0 0 0
......................................................................................................................TGACTAGACCGAACACACGTGCT.............................................................. 23 1 1 12.00 12 2 9 0 1 0 0
......................................................................................................................TGACTAGACCAAACACTCGTGCC.............................................................. 23 2 1 12.00 12 12 0 0 0 0 0
......................................................................................................................TCACTAGACCGAACACTCGTGC............................................................... 22 1 1 12.00 12 12 0 0 0 0 0
......................................................................................................................TGACTATACCGAACACTCGTGCC.............................................................. 23 2 1 12.00 12 9 3 0 0 0 0
......................................................................................................................TGACTAGACCGAAAACTCGTGCT.............................................................. 23 1 1 12.00 12 3 9 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCGTTCT.............................................................. 23 2 1 12.00 12 10 2 0 0 0 0
......................................................................................................................AGACTAGACCGAACACTCGTGCC.............................................................. 23 2 1 12.00 12 12 0 0 0 0 0
......................................................................................................................CGACTAGACCGAACACTCGTGCC.............................................................. 23 2 1 12.00 12 12 0 0 0 0 0
......................................................................................................................TGACTAGACAGAACACTCGTGCT.............................................................. 23 1 1 12.00 12 0 12 0 0 0 0
......................................................................................................................CGACTAGACCGAACACTCGTGC............................................................... 22 1 1 12.00 12 10 0 1 1 0 0
......................................................................................................................TGGCTAGACCGAACACTCGTGCC.............................................................. 23 2 1 11.00 11 10 1 0 0 0 0
......................................................................................................................TGCTTAGACCGAACACTCGTGCT.............................................................. 23 2 1 11.00 11 11 0 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCGTCCT.............................................................. 23 2 1 11.00 11 6 5 0 0 0 0
......................................................................................................................TAACTAGACCGAACACTCGTGC............................................................... 22 1 1 11.00 11 9 2 0 0 0 0
......................................................................................................................TGATTAGACCGAACACTCGTGAC.............................................................. 23 3 1 11.00 11 11 0 0 0 0 0
.........................................................................................................................CTAGACCGAACACTCGTGCT.............................................................. 20 0 1 11.00 11 6 5 0 0 0 0
......................................................................................................................TTACTATACCGAACACTCGTGCC.............................................................. 23 3 1 11.00 11 11 0 0 0 0 0
......................................................................................................................TTACTAGACCGACCACTCGTGCC.............................................................. 23 3 1 10.00 10 10 0 0 0 0 0
......................................................................................................................TGTCTAGACCGAACACTCGTGCT.............................................................. 23 1 1 10.00 10 6 4 0 0 0 0
......................................................................................................................TGAATAGACCGAACACTCGTGCT.............................................................. 23 1 1 10.00 10 0 10 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGGGC............................................................... 22 1 1 10.00 10 5 4 0 0 1 0
......................................................................................................................TTACTAGACCGAACACTCGAGCT.............................................................. 23 2 1 10.00 10 10 0 0 0 0 0
......................................................................................................................TGACAAGACCGAACACTCGTGCT.............................................................. 23 1 1 10.00 10 10 0 0 0 0 0
......................................................................................................................TGACTAGACTGAACACTCGTGCC.............................................................. 23 2 1 9.00 9 9 0 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCCTGC............................................................... 22 1 1 9.00 9 1 8 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCCTCCT.............................................................. 23 2 1 9.00 9 0 9 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTTGTGCC.............................................................. 23 2 1 9.00 9 9 0 0 0 0 0
......................................................................................................................TGACTAGACCGCACACTCGCGCT.............................................................. 23 2 1 9.00 9 0 9 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCGTGCTC............................................................. 24 2 1 9.00 9 8 1 0 0 0 0
......................................................................................................................TGACTAGACCGAAGACTCGTGCT.............................................................. 23 1 1 9.00 9 4 5 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCGTGCTA............................................................. 24 1 1 9.00 9 9 0 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCCCGCT.............................................................. 23 2 1 9.00 9 0 9 0 0 0 0
......................................................................................................................TGACTAGACCCAACACTCGTGC............................................................... 22 1 1 9.00 9 0 9 0 0 0 0
......................................................................................................................TGACTAGACCACACACTCGTGCT.............................................................. 23 2 1 9.00 9 0 9 0 0 0 0
......................................................................................................................TGACTAGACCCAACACTCGCGCT.............................................................. 23 2 1 9.00 9 0 9 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTTCC.............................................................. 23 2 1 9.00 9 9 0 0 0 0 0
......................................................................................................................TGACTAGCCCGAACACTCGTGC............................................................... 22 1 1 9.00 9 8 1 0 0 0 0
......................................................................................................................TTACTAGACCCAACACTCGTGCT.............................................................. 23 2 1 9.00 9 1 8 0 0 0 0
......................................................................................................................TGACTGGACCGAACACTCGTGC............................................................... 22 1 1 9.00 9 8 1 0 0 0 0
......................................................................................................................TTACTAGAACGAACACTCGTGCT.............................................................. 23 2 1 8.00 8 8 0 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTGTC.............................................................. 23 2 1 8.00 8 6 2 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCGTGA............................................................... 22 2 1 8.00 8 8 0 0 0 0 0
......................................................................................................................TGACTAGACCGCACACTCGTCCT.............................................................. 23 2 1 8.00 8 0 8 0 0 0 0
......................................................................................................................TGACTAGACCGAACACGCGTGCG.............................................................. 23 2 1 8.00 8 1 7 0 0 0 0
......................................................................................................................TGACTAGCCCGAACACGCGTGCT.............................................................. 23 2 1 8.00 8 8 0 0 0 0 0
.....................................................................................................................CGGACTAGACCGAACACTCGTGCT.............................................................. 24 2 1 8.00 8 8 0 0 0 0 0
......................................................................................................................TTGCTAGACCGAACACTCGTGCT.............................................................. 23 2 1 8.00 8 6 2 0 0 0 0
......................................................................................................................TTACTAGACTGAACACTCGTGCT.............................................................. 23 2 1 8.00 8 8 0 0 0 0 0
......................................................................................................................TTACTAGACCGAACATTCGTGCC.............................................................. 23 3 1 8.00 8 8 0 0 0 0 0
......................................................................................................................TGACGAGACCGAACACTCGTGCT.............................................................. 23 1 1 8.00 8 3 5 0 0 0 0
......................................................................................................................TAACTAGACCGAACACTCGTGCTT............................................................. 24 2 1 7.00 7 7 0 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTCT............................................................... 22 2 1 7.00 7 7 0 0 0 0 0
......................................................................................................................TGACTAGACCGACCACTCGTGAT.............................................................. 23 2 1 7.00 7 7 0 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCATGCC.............................................................. 23 2 1 7.00 7 7 0 0 0 0 0
......................................................................................................................TGACTAGACCCAACACTCGTTCT.............................................................. 23 2 1 7.00 7 0 7 0 0 0 0
......................................................................................................................TGACTAGACCGAACCCTCGCGCT.............................................................. 23 2 1 7.00 7 1 6 0 0 0 0
......................................................................................................................TGATTAGACCGAACATTCGTGCT.............................................................. 23 2 1 7.00 7 7 0 0 0 0 0
......................................................................................................................TTACTAGACCGCACACTCGTGCT.............................................................. 23 2 1 7.00 7 7 0 0 0 0 0
......................................................................................................................TGATTAGACCGAACACTCGTG................................................................ 21 1 1 7.00 7 7 0 0 0 0 0
......................................................................................................................GGACTAGACCGAACACTCGTGC............................................................... 22 1 1 7.00 7 5 2 0 0 0 0
......................................................................................................................TTACTAGCCCGAACACTCGTGC............................................................... 22 2 1 7.00 7 7 0 0 0 0 0
.....................................................................................................................CTGACTAGACCGAACACTCGTGC............................................................... 23 1 1 7.00 7 7 0 0 0 0 0
......................................................................................................................TGACTAGACCCAACACTCGTCCT.............................................................. 23 2 1 7.00 7 0 7 0 0 0 0
......................................................................................................................TGACTAGACCGCACCCTCGTGCT.............................................................. 23 2 1 7.00 7 0 7 0 0 0 0
......................................................................................................................TTACTAGACCGAACCCTCGTGCC.............................................................. 23 3 1 7.00 7 7 0 0 0 0 0
......................................................................................................................TGACTAGACCGAACATTCGTGC............................................................... 22 1 1 7.00 7 7 0 0 0 0 0
......................................................................................................................TGACTATACCGAACACTCTTGCT.............................................................. 23 2 1 7.00 7 0 6 0 1 0 0
......................................................................................................................TGACTAGACCGAACACCCGCGCT.............................................................. 23 2 1 7.00 7 0 7 0 0 0 0
......................................................................................................................GTACTAGACCGAACACTCGTGCC.............................................................. 23 3 1 6.00 6 6 0 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTTGTGC............................................................... 22 1 1 6.00 6 3 3 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCTTGCC.............................................................. 23 3 1 6.00 6 6 0 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTC................................................................... 18 0 1 6.00 6 5 1 0 0 0 0
......................................................................................................................TGACTAGACCGAACTCTCGTGCT.............................................................. 23 1 1 6.00 6 2 4 0 0 0 0
......................................................................................................................TTACTAGACTGAACACTCGTGCC.............................................................. 23 3 1 6.00 6 6 0 0 0 0 0
......................................................................................................................TTACTAGACCGAACCCTCGTGC............................................................... 22 2 1 6.00 6 6 0 0 0 0 0
......................................................................................................................AGACTAGACCGAACACTCGTGC............................................................... 22 1 1 6.00 6 6 0 0 0 0 0
......................................................................................................................TGACTAGACCGAACACGCGTGAT.............................................................. 23 2 1 6.00 6 6 0 0 0 0 0
......................................................................................................................TTACTGGACCGAACACTCGTGCT.............................................................. 23 2 1 6.00 6 6 0 0 0 0 0
......................................................................................................................TGACTAGACCGAACACCCGTGCC.............................................................. 23 2 1 6.00 6 1 5 0 0 0 0
......................................................................................................................TGACTAGACCCCACACTCGTGCT.............................................................. 23 2 1 6.00 6 0 6 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTCCC.............................................................. 23 2 1 6.00 6 5 1 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGAGCC.............................................................. 23 2 1 6.00 6 5 1 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCGTAC............................................................... 22 2 1 6.00 6 6 0 0 0 0 0
......................................................................................................................TGACTATACCGAACACTCGTTCT.............................................................. 23 2 1 6.00 6 0 6 0 0 0 0
......................................................................................................................CTACTAGACCGAACACTCGTGCC.............................................................. 23 3 1 6.00 6 6 0 0 0 0 0
......................................................................................................................TGACTAGATCGAACACTCGTGCC.............................................................. 23 2 1 5.00 5 5 0 0 0 0 0
......................................................................................................................TTACTAGACCCAACACTCGTACT.............................................................. 23 3 1 5.00 5 0 5 0 0 0 0
......................................................................................................................TGACTATACCGAACACTCGTCCT.............................................................. 23 2 1 5.00 5 0 5 0 0 0 0
.............................................................TGGCGATTGTCGGTATGGTCGC........................................................................................................................ 22 0 1 5.00 5 4 1 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTGCTAT............................................................ 25 0 1 5.00 5 1 4 0 0 0 0
......................................................................................................................TGACTAGACCGCACACTCTTGCT.............................................................. 23 2 1 5.00 5 0 5 0 0 0 0
......................................................................................................................TGACTAGACCAAACACTCGTGC............................................................... 22 1 1 5.00 5 3 2 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGCGCTT............................................................. 24 2 1 5.00 5 2 3 0 0 0 0
......................................................................................................................TGACTAGACCGACCCCTCGTGCT.............................................................. 23 2 1 5.00 5 1 4 0 0 0 0
......................................................................................................................TGATTAGACCGAACCCTCGTGCT.............................................................. 23 2 1 5.00 5 5 0 0 0 0 0
......................................................................................................................TGACTATACCGAACACTCGCGCT.............................................................. 23 2 1 5.00 5 0 5 0 0 0 0
......................................................................................................................TTCCTAGACCGAACACTCGTGCC.............................................................. 23 3 1 5.00 5 5 0 0 0 0 0
......................................................................................................................TGACTAGACCGCACACTCGTGCC.............................................................. 23 2 1 5.00 5 3 2 0 0 0 0
......................................................................................................................TGACTAGCCCGCACACTCGTGCT.............................................................. 23 2 1 5.00 5 0 5 0 0 0 0
......................................................................................................................TGACTAGACCCAACACCCGTGCT.............................................................. 23 2 1 5.00 5 0 5 0 0 0 0
..........................................................................................................................TAGACCGAACACTCGTGCT.............................................................. 19 0 1 5.00 5 5 0 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCGTACT.............................................................. 23 2 1 5.00 5 3 2 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCGGGCC.............................................................. 23 3 1 5.00 5 5 0 0 0 0 0
......................................................................................................................TGACCAGACCGAACACTCGTGCC.............................................................. 23 2 1 5.00 5 5 0 0 0 0 0
......................................................................................................................TGGCTAGACCGATCACTCGTGCT.............................................................. 23 2 1 5.00 5 0 5 0 0 0 0
......................................................................................................................TGACTAGACCGAACGCTCGTGCC.............................................................. 23 2 1 5.00 5 5 0 0 0 0 0
......................................................................................................................TGACTAGACCGAGCACTCGTGC............................................................... 22 1 1 5.00 5 3 2 0 0 0 0
......................................................................................................................TGACTAGACCTAACACTCGTTCT.............................................................. 23 2 1 5.00 5 0 5 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCGTGCTTT............................................................ 25 2 1 5.00 5 5 0 0 0 0 0
......................................................................................................................TTACTAGACCGACCACTCGTGC............................................................... 22 2 1 5.00 5 5 0 0 0 0 0
..............................................................GGCGATTGTCGGTTTGGTCGCT....................................................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0
...................................................................................................................ATCTGACTAGACCGAACACTCGTGCT.............................................................. 26 2 1 5.00 5 5 0 0 0 0 0
......................................................................................................................TTACAAGACCGAACACTCGTGCT.............................................................. 23 2 1 5.00 5 4 1 0 0 0 0
..........................................................................................................................TAGACCGAACACTCGTGC............................................................... 18 0 1 5.00 5 4 1 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTCC............................................................... 22 1 1 5.00 5 2 3 0 0 0 0
......................................................................................................................TGACTAGACCGAATACTCGTGC............................................................... 22 1 1 5.00 5 4 0 1 0 0 0
......................................................................................................................TGACTAGACCTAACACTCGTGCC.............................................................. 23 2 1 5.00 5 2 3 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCG.................................................................. 19 1 1 4.00 4 4 0 0 0 0 0
......................................................................................................................TGACTAGACCCAACAATCGTACT.............................................................. 23 3 1 4.00 4 0 4 0 0 0 0
......................................................................................................................TCACTAGACCCAACACTCGTGCT.............................................................. 23 2 1 4.00 4 0 4 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCTTGC............................................................... 22 1 1 4.00 4 1 3 0 0 0 0
......................................................................................................................TAACTAAACCGAACACTCGTGCT.............................................................. 23 2 1 4.00 4 0 4 0 0 0 0
......................................................................................................................TGACTAGCCCCAACACTCGTGCT.............................................................. 23 2 1 4.00 4 0 4 0 0 0 0
......................................................................................................................TGACTAGACCGGACACTCGTGC............................................................... 22 1 1 4.00 4 0 4 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCCTTCT.............................................................. 23 2 1 4.00 4 0 4 0 0 0 0
.......................................................................................................................GACTAGACCGAACACTCGTG................................................................ 20 0 1 4.00 4 1 0 3 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTACC.............................................................. 23 2 1 4.00 4 4 0 0 0 0 0
......................................................................................................................TGACTAGTCCGAACACTCGTGCT.............................................................. 23 1 1 4.00 4 1 3 0 0 0 0
......................................................................................................................TTACTAAACCGAACACTCGTGCT.............................................................. 23 2 1 4.00 4 4 0 0 0 0 0
......................................................................................................................TTACTAGACCGAACACCCGTGCT.............................................................. 23 2 1 4.00 4 4 0 0 0 0 0
......................................................................................................................TGACTAGACCTAACACTCGTCCT.............................................................. 23 2 1 4.00 4 0 4 0 0 0 0
......................................................................................................................TGACTAGACCGAACACCCGTTCT.............................................................. 23 2 1 4.00 4 0 4 0 0 0 0
......................................................................................................................TGACTAGACCAAACACTCTTGCT.............................................................. 23 2 1 4.00 4 1 3 0 0 0 0
......................................................................................................................TGATTAGACCGAACACTCGTGAT.............................................................. 23 2 1 4.00 4 4 0 0 0 0 0
..................................................................................................................GATCTGACTAGACCGAACACTCGTGCT.............................................................. 27 2 1 4.00 4 4 0 0 0 0 0
......................................................................................................................TTACTAGACCTAACACTCGTGCT.............................................................. 23 2 1 4.00 4 1 3 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTTGTGCC.............................................................. 23 3 1 4.00 4 4 0 0 0 0 0
......................................................................................................................TGACTAGCCCGACCACTCGTGCT.............................................................. 23 2 1 4.00 4 1 3 0 0 0 0
......................................................................................................................TGACTAGACCGACCACTCGTTCC.............................................................. 23 3 1 4.00 4 4 0 0 0 0 0
....................................................................................TTTTCACAAAAAAATTGGTTACCAAC............................................................................................. 26 0 1 4.00 4 4 0 0 0 0 0
.......................................................................................................................GACTAGACCGAACACTCGTGCC.............................................................. 22 1 1 4.00 4 4 0 0 0 0 0
....................................................................................TTTTCACAAAAAAATTGGTTACCA............................................................................................... 24 0 1 4.00 4 4 0 0 0 0 0
......................................................................................................................TGACTAGACCGAACACGCGTGCC.............................................................. 23 2 1 4.00 4 3 1 0 0 0 0
......................................................................................................................AGACTAGACCGAACACTCCTGCT.............................................................. 23 2 1 4.00 4 0 4 0 0 0 0
......................................................................................................................TTACCAGACCGAACACTCGTGCC.............................................................. 23 3 1 4.00 4 4 0 0 0 0 0
..............................................................GTCGATTGTCGGTATGGTCGC........................................................................................................................ 21 1 1 4.00 4 4 0 0 0 0 0
....................................................................................TTTTCACAAAAAAATTGGTTACC................................................................................................ 23 0 1 4.00 4 4 0 0 0 0 0
..............................................................GGCGATTGTCGGTTTGGTCGC........................................................................................................................ 21 1 1 4.00 4 4 0 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCTTCCT.............................................................. 23 2 1 4.00 4 0 4 0 0 0 0
......................................................................................................................TGACTAGACCGAACAGTCGTGCT.............................................................. 23 1 1 4.00 4 1 3 0 0 0 0
......................................................................................................................TGACTAGAGCGAACACTCGTGC............................................................... 22 1 1 4.00 4 0 0 4 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTGGC.............................................................. 23 2 1 4.00 4 4 0 0 0 0 0
......................................................................................................................TGACTAGACCGAACCTTCGTGCT.............................................................. 23 2 1 4.00 4 4 0 0 0 0 0
......................................................................................................................TGATTAGACCGAACACTCTTGCT.............................................................. 23 2 1 4.00 4 4 0 0 0 0 0
......................................................................................................................TGACTAGACCGAACACTCGTT................................................................ 21 1 1 4.00 4 0 2 0 1 0 1
....................................................................................................................TCTGACTAGACCGAACACTCGTGCC.............................................................. 25 3 1 4.00 4 4 0 0 0 0 0
......................................................................................................................TGACTAGACCTAACACTCATGCT.............................................................. 23 2 1 4.00 4 0 4 0 0 0 0
......................................................................................................................TGACTAGACCGCACACTCGTTCT.............................................................. 23 2 1 4.00 4 0 4 0 0 0 0
......................................................................................................................TGATTAGAACGAACACTCGTGCT.............................................................. 23 2 1 4.00 4 4 0 0 0 0 0
......................................................................................................................TGACTAGACTGAACACTCGTGC............................................................... 22 1 1 4.00 4 1 3 0 0 0 0
......................................................................................................................TAACTAGACCCAACACTCGTGCT.............................................................. 23 2 1 4.00 4 0 4 0 0 0 0
....................................................................................................................TCTGACTAGACCGAACACTCGTGCT.............................................................. 25 2 1 4.00 4 4 0 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCATGCT.............................................................. 23 2 1 4.00 4 4 0 0 0 0 0
......................................................................................................................TGACTATACCGCACACTCGTGCT.............................................................. 23 2 1 4.00 4 0 4 0 0 0 0
......................................................................................................................TGACTAGACCGGACACGCGTGCT.............................................................. 23 2 1 4.00 4 0 4 0 0 0 0
......................................................................................................................TTACTAGACCGAACACTCGTGCA.............................................................. 23 2 1 4.00 4 3 1 0 0 0 0
......................................................................................................................TTATTAGACCGAACACTCGTGCTT............................................................. 24 3 1 4.00 4 4 0 0 0 0 0
......................................................................................................................TGACTAGCCCGAACACTCGTGA............................................................... 22 2 1 4.00 4 4 0 0 0 0 0
........................................................................................................................ACTAGACCGAACACTCGTGCC.............................................................. 21 1 1 4.00 4 4 0 0 0 0 0
......................................................................................................................TGACTAGACCGCACACTCGTACT.............................................................. 23 2 1 4.00 4 0 4 0 0 0 0

Anti-sense strand reads

GTTGCTTCTTAGTTAAGTAGTTTAACATTCACTAAAAATCGTAGTCTTAAAATTTTAACTTACCGCTAACAGCCATACCAGCGAAAAAGTGTTTTTTTAACCAATGGTTGTTCGCTTCACTGATCTGGCTTGTGAGCACGATATTAAAATTTTACAAGTAGTTCGATTTCACTGAACCTTTACATTTCAAAGTTTATTATATG

***********************************************((((((((((((....((((.(((((((.((((((((((............(((........)))..)))))))))).)))).))).))))....))))))))))))..*********************************************** 		Read size # Mismatch Hit Count Total Norm Total M044

female body

 V055

head

 V105

male body		 V106

head

 M058

embryo
.......................................CGTAGTCTTACAATTTTAA................................................................................................................................................. 19 1 1 1.00 1 1 0 0 0 0
......................................GCGTAGTCTTACAATTTTA.................................................................................................................................................. 19 2 5 0.20 1 0 0 0 1 0
....................................ACGCGTAGTCTTACAATTTTA.................................................................................................................................................. 21 3 5 0.20 1 0 0 1 0 0
......................................TCGTTGTCTCAAAATGTTAAC................................................................................................................................................ 21 3 7 0.14 1 0 1 0 0 0
.........................................................................CATACCAGCGACAAGGCGT............................................................................................................... 19 3 17 0.06 1 0 1 0 0 0
.........TACATAAGTAGTTCAACATT.............................................................................................................................................................................. 20 3 17 0.06 1 1 0 0 0 0
...................................................................AAGAACCATACAAGCGAAAA.................................................................................................................... 20 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_13266:9731309-9731511 + dan-mir-286 Known_mirbase CAACGAA----GAAT-CAATTC-A-TC----------------------------------------------------------------------------------------AAATTGTAAGTGATTTT-TAG--------CAT----------------------C-A---------GAA-TTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTCAC-AAA-A--AAATT---GGTT----ACCAACAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGCTAA-------------AGT------G-ACT-TGGAAATGTAAAG-----------TT---TC------------------------------------AAATA-ATATAC
droBip1 scf7180000396427:874291-874473 + CAACAAA----GAAT-CCAGTC-A------------------------------------------------------------------------------------------TCAAATGTAAGTGGTTAT-TAG--------CAT----------------------C-A---------GAA-TTTTAGAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTTCACA-AAAG---------GGTT----TCCATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCTAA-------------AGT------G---T--------------------------T---TC------------------------------------AAATA-GTGTTT
droKik1 scf7180000302679:89333-89550 - CGACGGA----GACTCCAACA--------------------------------------------------------GCAGCACCAAGAAAGT--AA------AGTTCCAAAAGTGAAAAGAAACAGCTAAT--------------T----------------------A-C---------CAG-TTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTGAA-A----CCA-------GGTT----CCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGTTAG------GGGATAAAGT------GCAGT-TGTAA---CAA-------------GT---TA------------------------------------A------TATAT
droFic1 scf7180000454039:848010-848197 - CATCGAATCTT-----CAAACA-A-A--------------------------------------------------------------CCAAT--AA--------TC---------C--AACAAGTGAACTTAAGG--------CTC----------------------A-T---------CAG-TTTTAAAATTAAATGGCGATTGTCGGTATAGTCGCTTTTACAA-A----C---------ATTT----CCTTTCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACAGACAAG--------------GT------GAAGT-TACCAGTGAAA-----------------------------------------------------------------AAC
droEle1 scf7180000491201:2013963-2014154 - CATCGCTT--------CAACCA-TA---------------------------------------------------------------CAAAGCCAA--------TA--------CAAAAGTAAGTGATAAT-CGG--------TGC----------------------T-C---------CAGTTTTTAAAATTGAATGGCGAATGTCGGTATGGTCGCTTTTTAAA-A----T---------GGTT----TCGACCAA---------GCGTAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCCAA--------------GT------GATGTTTTTTAGTGAAA----------------------------------------------------------------GAGG
droRho1 scf7180000780066:73600-73798 + CATCGCTACTT-----CAACCA-TA---------------------------------------------------------------TAAATACAA--------TA--------CAAAAGTAAGTGATAAT-TGG--------CAC----------------------T-C---------CAG-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTAAT-A----C---------GGTT----CCGACCAA---------GCTAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAGTTTTCAACTTGCCTA--------------GT------GAAAT-TATTAGTGAAA------------------------AGAAG---------------------------A-------CATC
droBia1 scf7180000302143:3059786-3059974 - CAACGTA----AACT------G-A----------------------------------------------------------------AAAAT--A-------CGTG--------CCAAAGTAAGTGAGAA---GG--------GCC----------------------T-C---------CAG-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-A----C---------GGTG----ACGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATACTCAACAAGCGAA--------------GT------GAAGT-TAAAGGTGCAA----------------------------------------------------------GTG-GGCCAT
droTak1 scf7180000415384:83994-84189 + CAAG------------CAACCA-AA---------------------------------------------------------------GAAAT--AA--------TC--------TCAAAGTAAGTGATACC-AGG--------CTC----------------------T-C---------CAG-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-A----C---------GATT----ACCATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTTA--------------GT------GAAGT-TA-AAGTTAAA-------------GTTAATG------------------------------------TGAAT-G-TAGG
droEug1 scf7180000409474:2396811-2396986 + CATCAAGACTT-----TAAAC---------------------------------------------------------------------------------------------TGAAAAGTAAGTGATAAT-TGG--------CAA----------------------T-C---------CAG-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCGCTTTTTCAA-A----C---------G------------------------ACTAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATAATCAACAAGCTAA--------------GT------GAA-------AGTTAAA-------------AA---GCAAA-AATAA---------------------------A-------GATC
dm3 chr2R:15548881-15549089 - dme-mir-286 Known_mirbase CGTCGCAACTT-----CAAATC-A-AT-------------------------------------------------------------TA-----AATCAAAAAA---------TCAAGAGTAAGTGATATT-GGG--------CAC----------------------T-C---------CAG-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-A-GAAA---------GGTT----TCGATTAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------------GT------AAAGT-TGCGAGTGAAA-------------AT---TA------------------------------------AAATA-T-TATG
droSim2 2r:16196152-16196359 - dsi-mir-286 Known_mirbase CGTCGCTACTT-----CAAATC-A-AC--------------------------------------------------------------------AATCCAAAAA---------GCAAGAGTAAGTGATATT-GGG--------CAC----------------------T-C---------CAG-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCAAA-GAAA---------GGTT----TCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------------GT------GAAGT-TGCAAGTGAAA-------------CT---TC------------------------------------AAATA-T-TCTG
droSec2 scaffold_1:13063610-13063811 - dse-mir-286 Known_mirbase CAACTAC----------AAATC-A-AC--------------------------------------------------------------------AATCAAAAAA---------TCAAGAGTAAGTTATATT-GGG--------CAC----------------------T-C---------CAG-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCA-A-TAAA---------GGTT----TCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------------GT------GAAGT-TGCAAGTGAAA-------------CT---TC------------------------------------AAATA-T-TCTG
droYak3 2R:13623700-13623910 + dya-mir-286 Known_mirbase CGACGCAGCTA-----CAAATC-A-AC---------------------------------------------------------------AGT--AA--------TG-CAAAAGAGAAGAGTAAGTGTTA-T-AGG--------CAC----------------------T-C---------CAG-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-A----AGA-------GGTT----TCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------------GT------GAAGT-TGCAAGTGAAAT-------------T-AATC------------------------------------AGATA-CTGGGG
droEre2 scaffold_4845:9749134-9749333 - der-mir-286 Known_mirbase CGACGCAACTA-----CAAATC-A-AC---------------------------------------------------------------AAC--A-------AATG---------CAGAGTAAGTGTTA-T-AGG--------CAC----------------------T-G---------CAG-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-A----GAA-------GGTT----TCGATCGA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCACA-------C-----TGT------GAAGT-TGCGAGTGAAA------------------------ACAAA---------------------------A------GATAC
dp5 3:12677510-12677743 - dps-mir-286 Known_mirbase CAACAAGTGTA-----CAAGAA-----TGGCGAT---------------------AA-----AGTGTGTGTGTCGCAGAAA----------------------------------------------------AAG--------AAG----------------------A-C---------AAA-TTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACC-A----G---------GGTT----CCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCCA------ACC----AGTGAC----------GAAAGTGACAA--------AAGT-------GAAAA---AAGTGACAAAGTTTGTGTACACTCCA--CGAGT-T-GATA
droPer2 scaffold_2:8905923-8906127 + dpe-mir-286 Known_mirbase CAACAAGTGTA-----CAAGAA-----TGGCGAT---------------------AA-----AGTGTGTGTGTCGCAGAAA----------------------------------------------------AAG--------AAG----------------------A-C---------AAA-TTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACC-A----G---------GGTT----CCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCCA------ACC----AGTGAC----------GGAAGTGACAA--------AAGT-------GA----------------------------------AAAAA-G-TGAC
droWil2 scf2_1100000004514:1651702-1651919 - dwi-mir-286 Known_mirbase CAACCCA----AAAAGTTAGCCAA------------------------------------------------------CCAAA-----C----------------------------TTAGTGAGTGACTAT---G--------CAA-------------TTGAA----A-T---------TAC-TTTTAAAATTGAATGGCGATTGTCGGTATAGTCTCTTTTTCCA-A----AAATCTTGTTTGTTTTTGCCAATCTA------ATAAGAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCAAC-------------AAC------CAACA-AGCTAGTGAGAA--------GAAT-------T-----------------------------------AA-CT-T-TAAC
droVir3 scaffold_12875:4112040-4112302 + dvi-mir-286 Known_mirbase GAGAAAA----TAACG-CAGCT---------------CAGATATTCCAGTGTTT--------------------------------------------------------------C------AGTGTGA---CAGTGTTCCAGTATTCCAGTGTTTCAATTCCAATATTCCA--------GTA-TTTTAAAATTAAATGGCGATTGTCGGTATGGTCGCTTTTTCAA-A----CAA-------TATA----CCATT-AT-----CTATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACGTATATAAAAAGCACA----AGTTCTCG----------ATTTGATAA--------CCGT-------CG------------CAATATATATATATAT---ATATA--TC-TATAT
droMoj3 scaffold_6496:20936718-20936979 - dmo-mir-286 Known_mirbase GCACAAA----GGAGG--AG------------TGTTTCAG---TTCCAGTGTTT--------------------------------------------------------------CACTAT-----------CAGTGTTTCAC--TTTCAGTGTTTCATTTCCAGTGTTCGAAAATTATAAAA-TTTTAAAATTAAATGGCGATTGTCGGTATGGTCTCTTTTTCAA-C----ATA-------TA--------CACCAAACATTCTATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAATTTCA------ATT-----AT------AAAAT-TTCTAGTGCATG-GTTCAAA----CT---TA--AAA---AGAAAACAA-------------------AA--TC-TATAT
droGri2 scaffold_15112:2108763-2109000 - dgr-mir-286-1 Known_mirbase AAGAAAA----GAATATAAAA------TGGTGAA-------TTTTGCAGTGTTTTGCAGTGTTTTGTGTGTGTTGCAGTCAAA-----CC------------------------------------------------------CAG----------------------C-CA--------GTA-TTTTAAAATTAAATGGCGATTGTCGGTATGGTCGCTTTTGAAC-CTA-A--ACTCT---ATAT----ACAATA--------TATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACATAGGCA-------TC----AGTTTTGGTTAAAT-GAAAAATGATA-------------AA---TC------------------------------------GA--TC-TATAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CAACGAA----GAAT-CAATTC-A-TC----------------------------------------------------------------------------------------AAATTGTAAGTGATTTT-TAG--------CAT----------------------C-A---------GAA-TTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTCAC-AAA-A--AAATT---GGTT----ACCAACAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGCTAA-------------AGT------G-ACT-TGGAAATGTAAAG-----------TT---TC------------------------------------AAATA-ATATACSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT......................................................................................................................................23141249.004124961228095121135643330
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC......................................................................................................................................2317839.0078391780729002
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.......................................................................................................................................2214133.0041336732298071326
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT.....................................................................................................................................241568.0056819431111214
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG........................................................................................................................................211376.003762225189509
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC......................................................................................................................................231134.0013401340000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.......................................................................................................................................22170.007003633001
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT.........................................................................................................................................20170.007012336055
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT......................................................................................................................................22170.007049147000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG......................................................................................................................................23167.006704621000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC.....................................................................................................................................24160.00601509000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA.....................................................................................................................................24145.00452358000
.......................................................................................................................................................................................................GGCGATTGTCGGTATGGTCGCT...................................................................................................................................................................................................................22138.00381343000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG..........................................................................................................................................19133.00331311000
.....................................................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT......................................................................................................................................21132.00324197002
.......................................................................................................................................................................................................GGCGATTGTCGGTATGGTCGC....................................................................................................................................................................................................................21128.00281260001
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.......................................................................................................................................22122.00220201001
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA......................................................................................................................................23122.00220165100
.......................................................................................................................................................................................................GGCGATTGTCGGTATGGTCGCC...................................................................................................................................................................................................................22117.00170170000
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC.......................................................................................................................................21115.00151131000
......................................................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT......................................................................................................................................20111.0011065000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC......................................................................................................................................2318.008062000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT.......................................................................................................................................2217.007070000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTC...........................................................................................................................................1816.006051000
......................................................................................................................................................................................................TGGCGATTGTCGGTATGGTCGC....................................................................................................................................................................................................................2215.005041000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT....................................................................................................................................2515.005014000
.......................................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT......................................................................................................................................1915.005050000
.......................................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGC.......................................................................................................................................1815.005041000
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTG........................................................................................................................................2014.004310000
.............................................................................................................................................................................................................................TTTTCAC-AAA-A--AAATT---GGTT----ACCAAC..............................................................................................................................................................................2614.004040000
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC......................................................................................................................................2214.004040000
.............................................................................................................................................................................................................................TTTTCAC-AAA-A--AAATT---GGTT----ACCA................................................................................................................................................................................2414.004040000
.............................................................................................................................................................................................................................TTTTCAC-AAA-A--AAATT---GGTT----ACC.................................................................................................................................................................................2314.004040000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGGC......................................................................................................................................2314.004040000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTT........................................................................................................................................2114.004002011
.....................................................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCC......................................................................................................................................2114.004040000
droBip1
CAACAAA----GAAT-CCAGTC-A------------------------------------------------------------------------------------------TCAAATGTAAGTGGTTAT-TAG--------CAT----------------------C-A---------GAA-TTTTAGAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTTCACA-AAAG---------GGTT----TCCATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCTAA-------------AGT------G---T--------------------------T---TC------------------------------------AAATA-GTGTTTSizeHit CountTotal NormTotal
No Reads
droKik1
CGACGGA----GACTCCAACA--------------------------------------------------------GCAGCACCAAGAAAGT--AA------AGTTCCAAAAGTGAAAAGAAACAGCTAAT--------------T----------------------A-C---------CAG-TTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTGAA-A----CCA-------GGTT----CCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGTTAG------GGGATAAAGT------GCAGT-TGTAA---CAA-------------GT---TA------------------------------------A------TATATSizeHit CountTotal NormTotal
No Reads
droFic1
CATCGAATCTT-----CAAACA-A-A--------------------------------------------------------------CCAAT--AA--------TC---------C--AACAAGTGAACTTAAGG--------CTC----------------------A-T---------CAG-TTTTAAAATTAAATGGCGATTGTCGGTATAGTCGCTTTTACAA-A----C---------ATTT----CCTTTCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACAGACAAG--------------GT------GAAGT-TACCAGTGAAA-----------------------------------------------------------------AACSizeHit CountTotal NormTotal
No Reads
droEle1
CATCGCTT--------CAACCA-TA---------------------------------------------------------------CAAAGCCAA--------TA--------CAAAAGTAAGTGATAAT-CGG--------TGC----------------------T-C---------CAGTTTTTAAAATTGAATGGCGAATGTCGGTATGGTCGCTTTTTAAA-A----T---------GGTT----TCGACCAA---------GCGTAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCCAA--------------GT------GATGTTTTTTAGTGAAA----------------------------------------------------------------GAGGSizeHit CountTotal NormTotal
No Reads
droRho1
CATCGCTACTT-----CAACCA-TA---------------------------------------------------------------TAAATACAA--------TA--------CAAAAGTAAGTGATAAT-TGG--------CAC----------------------T-C---------CAG-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTAAT-A----C---------GGTT----CCGACCAA---------GCTAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAGTTTTCAACTTGCCTA--------------GT------GAAAT-TATTAGTGAAA------------------------AGAAG---------------------------A-------CATCSizeHit CountTotal NormTotal
No Reads
droBia1
CAACGTA----AACT------G-A----------------------------------------------------------------AAAAT--A-------CGTG--------CCAAAGTAAGTGAGAA---GG--------GCC----------------------T-C---------CAG-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-A----C---------GGTG----ACGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATACTCAACAAGCGAA--------------GT------GAAGT-TAAAGGTGCAA----------------------------------------------------------GTG-GGCCATSizeHit CountTotal NormTotal
No Reads
droTak1
CAAG------------CAACCA-AA---------------------------------------------------------------GAAAT--AA--------TC--------TCAAAGTAAGTGATACC-AGG--------CTC----------------------T-C---------CAG-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-A----C---------GATT----ACCATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTTA--------------GT------GAAGT-TA-AAGTTAAA-------------GTTAATG------------------------------------TGAAT-G-TAGGSizeHit CountTotal NormTotal
No Reads
droEug1
CATCAAGACTT-----TAAAC---------------------------------------------------------------------------------------------TGAAAAGTAAGTGATAAT-TGG--------CAA----------------------T-C---------CAG-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCGCTTTTTCAA-A----C---------G------------------------ACTAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATAATCAACAAGCTAA--------------GT------GAA-------AGTTAAA-------------AA---GCAAA-AATAA---------------------------A-------GATCSizeHit CountTotal NormTotal
No Reads
dm3
CGTCGCAACTT-----CAAATC-A-AT-------------------------------------------------------------TA-----AATCAAAAAA---------TCAAGAGTAAGTGATATT-GGG--------CAC----------------------T-C---------CAG-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-A-GAAA---------GGTT----TCGATTAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------------GT------AAAGT-TGCGAGTGAAA-------------AT---TA------------------------------------AAATA-T-TATGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT......................................................................................................................................231525385.0052538500001844492491179644580310000000150094021181100107123122121319641123116271130002830000000000000000005431528573130591871321553705829104251310212210513823417245933700554163110617284194130431747304473416410201311974721110000025110098522175144797567043979747361422316330970102650415035101026004113118241811147801225711590005072102102163170000003013724244844828281448487482623146306000009401128001087726728710417412145254925398772141225101851011117538195281574923038250128161353514111720659313929815573919202151438155920102739133268554211331714564181459243861062591524831801441731980
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCT...................................................................................................................................................................................................................22145803.00458030000402895253516000000000000000000000000300000000000000000100000000000000000000000101001034815757615729812144401600421422010331029142114211860260073055191024000000000000100000000000821058116736470100010000000000000100020200000100000000000000000000000805000200000000000010011170110010000073640000000000000000010001000000210000000402000000110132524201400000000000120011000100000001120200000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.......................................................................................................................................22124186.00241860000011391136811100000000001001000000005101021032032000072100080000000000000000000000004322323887804500116400111249610618631623104540229093013000212000000000000100167215993818229020524100041644630005000901600003202001200051012120300010000801113000000100651166972611652730641412190000101512350132129120205601381851042161310029210313420221015011525132512316541150020200006031210912053023942225444886747254531310
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG........................................................................................................................................2118414.0084140000001314120000000000000000000000003493000000010111000110000010000000000000000000000003935381311100001202100311820001040006751016001000000010000000000000270331549243927000140000000000000101000001001000100001021000000000000000500000000000101116100421220002000024833800100001002000031601000110200130202701211028010413111162952010300113202001110100702014013112911102143130
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT.....................................................................................................................................2415866.0058660000003201770000000000000000000000000000000000400100000000000000000000000000000000034318415528240000210001013302600301411000149342340100001010001000000000001263267255063040001000000000000000000010010010100000010120010000000000000100000000000011112056020300200001052070010001010400000110000000101021021221116132100030102035247004000010010031004042112300001259150112270
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTCT.....................................................................................................................................................................................................................2015774.0057740000000410000000000000000000000000540200000000000000000000000000000000000000000000006012270000000010000000000001000400000000000000000000000000017191464000000040000000000000000000000000000000000000000000000000000000000000000000000000000000003400000000000000000000000000000000000000000000000002303200000000100000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT.........................................................................................................................................2014804.004804000000000000000000000000000000000025930000001003000000000000000000000000000000000000517200000100000010000000000000120000000000000000000000000010157119889250000000000000040610000000000000000000020100000000000000002100200000000030500070300000000809200100100000001021000000000000600026010103010010021937465501011000010000018219130124034160721141421150
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC......................................................................................................................................2313154.00315400000015513810000000000000000000000000000000000000000000000000000000000000000000000002491499814136003002000001001700009170008112043000000001000000000000000961593422562200000000000000000000000000000000000000000200000000000000000000000000000000001036110000000003568000000000020000250000000000000000201150300000000110517700000000000101000100000010000001040001020
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTCTC....................................................................................................................................................................................................................2112028.00202800000069220000000000000000000000001000000010000000000000000000000000000000000000016027216720200000200000000000200273300028103000000000100000000000000013789732410000000000000000000000000000000000000000000000000000020000000000000010000000010200000000138000000000000000000000010000000000000100000000000111192400600001000000000000000000010000000000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA.....................................................................................................................................2411874.0018740000006192100000000000000010000000000200000000000000000004000000000000000000000000152111487625000002002000000000008700059502700000000000000000000000057151359108181000020030000000000000000000000000000000000000000000000000000000000000000131317321620001100305200000000000000021000000000000101110415040000000103812000000000000000000010000010000000150001000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT....................................................................................................................................2511018.0010180000002102000000000000000000000000000000000000000000000000000000000000000000000000926825491600000000100000000000010003100400000000000000000000000014356519200000100000000000000000000000000000000000200000000000000002000000000000000403070023100010002419000000000000000000000000000000000000010000000000038433000020000000000000000000000000000120000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA......................................................................................................................................231501.005010000101478517000000000000000000000000001000000000000000000000000000000000000000000003877108001000000000100100001400082032001000000000000000000000317423740000000000000010000000100000000000100000000000000000000000000000000000000000008011001000069000000000000000000000000000000002200001600000100073900000000000000000000000001000000000001000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG..........................................................................................................................................191419.0041900000000000000000000000000000000001650100000000000000000002000000000000000000000000500000000000010000100000020000410700000000000000000000000011715120300000000000000000000000000000000000000000000000000000000000000000030000001000300000000008220000000000000000100000000000000000020000000000000845410000000000000000100000000000100100000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG......................................................................................................................................231390.00390000010299100000000000000000000000000000000000000000000000000000000000000000000000101212170000000000000000000054000261031000000000000000000000000926397840000000000000000000000000000000000100000020000000000000000000000000000000000000010000000036000000000010000010001000000000000000000000000000065200000000000000000000000000000000010000100
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT......................................................................................................................................221359.003590000001420000000000000000000000000000000000000000000000000000000000000000000000003125162010000000000000000000000000170090010000000000000000000003818160000000000000000000000230000000100000000006000000000000000000000000000000000000210800000000470000000000000000200000000000000000000300000000000121900000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.......................................................................................................................................221268.0026800000002340000000000000000000000000000000000000000000000000000000000000000000000074131300000010000011000000000000720000000000000000000000000011317304100000000000000000000010000000000010000000000000000000000000000000000000000000303000100001390000000000100001700001000000000000010000000000000741400000000000000000000000020000100800011100
.............................................................................................................................................................................................................................TTTTCAA-A-GAAA---------GGTT----TCGATTAA---------GCG................................................................................................................................................................271195.0019500000000000000000000000000000000000000000000000000000000000000000000000000000000080500000000000000000000000000000000000000000000000000000000436010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000110000000000000000000000000000000000000000000000000163200000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC.....................................................................................................................................241188.00188000000020000000000000000000000000000000000000000000000000000000000000000000000000121183020000000000000000000001000100000000000000000000000000006824900000000000000000000000000000000000000000002000000000000000000000000000000010001010000000026000000000000000000000000000000000001000000010000043600000000000000000001000000000000000000000
.....................................................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT......................................................................................................................................211160.0016000000000100000000000000000000000000000000000000000000000000000000000000000000000090372000000000000200000000000021030000000000000000000000005491000000000000000000000000000000000000000000100000000000000000000000000000001000000300000000670000000000000000300000000000000002000000000000000701600000000000000000000000000000000020000000
.......................................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT......................................................................................................................................191141.00141000000000000000000000000000000000000000000000000000000000000000000000000000000000130161000000000010012010000000000400000000000000000000000000031620800000000000000000000000000000100000000000000000000000000100000000000000000000000000000000055000000000000000000000000000000000000000000000000033100000000000000000000000000000000000000000
.....................................................................................................................................................................................................ATGGCGAATGTCGGTATGGTC......................................................................................................................................................................................................................211125.001250000000000000000000000000000000000000000000000000000000000000000000000000000000006032000000000000000000000000000000000000000000000000000000152840000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000080900000000000000000000000000000000020000000
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCC...................................................................................................................................................................................................................221123.00123000000461100000000000000000000000000000000000000000000000000000000000000000000000309032000000100000000000000140000002000000000000000000000000014600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000029000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT......................................................................................................................................201121.001210000000110000000000000000000000000200000000000000000000000000000000000000000000001128410000000000000010000000000400300000000000000000000000011591170000000000000000000000000000000000000000000000000000000000000000000000000000001000000000036000000000000000000000000000000000000000000000000026400000000000000000000000000000000000000000
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTC......................................................................................................................................................................................................................191113.001130000000000000000000000000000000000240000000000000000000000000000000000000000000000300020000000000000000000000000000000000000000000000000000040157000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000019200000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AGACCGAACACTCGTGCT......................................................................................................................................18197.00970000000000000000000000000000000000000000000001000000000000000000000000000000000001034110000000000014110000000000010000000000000000000000000081025010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032000000000000000000000000000000000200000000000000016200000000000000000000000000000000000000000
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGT.......................................................................................................................................................................................................................18193.009300000000000000000000000000000000000000000000000000000000000000000000000000000000050001000000000000000000000000010000000000000000000000000001752000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000059100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTATC...................................................................................................................................26190.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004346000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.......................................................................................................................................22180.0080000000111117000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000001000000000000000000000000000213500000000000000000000000000000000000000000000000000000000000000000000000000000001010000000053000000000000000000000000000000000000000000000000021200000000000000000000010000000000000000000
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCTT..................................................................................................................................................................................................................23176.0076000000000000000000000000000000000000000000000000000000000000000000000000000000000118161160000000000000001000002000100100000000000000000000000005400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000
......................................................................................................................................................................................................TGGCGAATGTCGGTATGGTCTCT...................................................................................................................................................................................................................23165.006500000001000000000000000000000000000000000000000000000000000000000000000000000000016001600000000000000000000800000006000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000023100000000000000000000000000000000000000000
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCA...................................................................................................................................................................................................................22157.005700000061011000000000000000000000000000000000000000000000000000000000000000000000001910020000000000000004000005000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCTA..................................................................................................................................................................................................................23156.005600000001000000000000000000000000000000000000000000000000000000000000000000000000075001100000000000000000000400000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................TTTTCAA-A-GAAA---------GGTT----TCGATTAA---------G..................................................................................................................................................................25155.00550000000000000000000000000000000000100000000000000000000000000000000000000000000002001000000000000000000000000000000000000000000000000000000223001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000035600000000000000000000000000000000000000000
........................................................................................................................................................................................................GCGAATGTCGGTATGGTCTCT...................................................................................................................................................................................................................21154.005400000002000000000000000000000000000000000000000000000000000000000000000000000000080101100000000000010000000040001006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTC...........................................................................................................................................18146.00460000000000000000000000000000000000000000000010000000000000000000000000000000000007010000000000000000000000000001004000000000000000020000000111001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000000000000000000000000000091300000000000000000000000000000000000000000
.........................................................................................................................................................................................................CGAATGTCGGTATGGTCTCT...................................................................................................................................................................................................................20141.0041000000100000000000000000000000000020000000000000000000000000000000000000000000000620170000000000000000000014000100300000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................TTTTCAA-A-GAAA---------GGTT----TCGATTAA---------GCGA...............................................................................................................................................................28135.00350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000075500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000017000000000000000000000000000000000000000000
......................................................................................................................................................................................................TGGCGAATGTCGGTATGGTCTC....................................................................................................................................................................................................................22135.00350000000000000000000000000000000000000000000000000000000000000000000000000000000001081000000000000010000000000000004000000000000000000000000001800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC......................................................................................................................................23134.00340000002000000000000000000000000000000000000000000000000000000000000000000000000002113000000100000000000000000000001000000000000000000000000102300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000014100000000000000000000000000000000100000000
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCG...................................................................................................................................................................................................................22134.003400000003000000000000000000000000000000000000000000000000000000000000000000000000010011200000000000000010000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG.....................................................................................................................................24134.0034000000010000000000000000000000000020000000000000000000000000000000000000000000000901000000000000000000000000000000000000000000000000000000002400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005100000000000000000000000000000000000000000001000006200000000000000000000000000000000000000000
.............................................................................................................................................................................................................................TTTTCAA-A-GAAA---------GGTT----TCGATTAA---------GC.................................................................................................................................................................26132.00320000000000000000000000000000000000000000000000000010000000000000000000000000000000051000000000000000000000000000000000000000000000000000000039000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAA....................................................................................................................................25129.0029000000000000000000000000000000000000000000000000000000000000000000000000000000000203100000000000000000000002000100000000000000000000000000001200100000000000000000000000000000000000000000000000000000000000000000000000001000904000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................GAATGTCGGTATGGTCTCT...................................................................................................................................................................................................................19127.00270000000000000000000000000000000000100000000000000000000000000000000000000000000001000200000000000000000000000000000000000000000000000000000155000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG........................................................................................................................................23127.0027000000030200000000000000000000000000000000000000000000000000000000000000000000000221700000000000000000000000000320000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCTC..................................................................................................................................................................................................................23125.00250000000000000000000000000000000000000000000000000000000000000000000000000000000005080000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
droSim2
CGTCGCTACTT-----CAAATC-A-AC--------------------------------------------------------------------AATCCAAAAA---------GCAAGAGTAAGTGATATT-GGG--------CAC----------------------T-C---------CAG-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCAAA-GAAA---------GGTT----TCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------------GT------GAAGT-TGCAAGTGAAA-------------CT---TC------------------------------------AAATA-T-TCTGSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT......................................................................................................................................2311382795.001382795251910879609732122304085121213235111035311169942314100
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC......................................................................................................................................231113758.001137583351081128210003113785026800000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.......................................................................................................................................22169704.00697042838646695171922272860658882781634000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG......................................................................................................................................23154047.00540478652537391002160016000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG..........................................................................................................................................1914915.0049151994845135008191500000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT.....................................................................................................................................2414724.0047241210225250015101138742053901000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG........................................................................................................................................2114456.004456281325101132410844582143900000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG.......................................................................................................................................2213354.00335495333800000000200000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA.....................................................................................................................................2412731.00273141978000211386276119000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC......................................................................................................................................2311653.00165341164700000000100000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT....................................................................................................................................2511566.00156611701006065875207700000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.......................................................................................................................................2211150.0011508278700000119033102000
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCT...................................................................................................................................................................................................................221976.009761147610014324822201000000
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT......................................................................................................................................221722.0072211557150010343407900000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT.........................................................................................................................................201603.00603813100315511057817501000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA......................................................................................................................................231478.004781132200063635902300000
.............................................................................................................................................................................................................................TTTTCCAAA-GAAA---------GGTT----TCGATCA.............................................................................................................................................................................241299.002990029010000340100000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTC...........................................................................................................................................181266.00266002070325008230000000
.............................................................................................................................................................................................................................TTTTCCAAA-GAAA---------GGTT----TCGATCAA---------G..................................................................................................................................................................261171.001710016000000370100000
.....................................................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT......................................................................................................................................211170.001700010100000251403000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC.....................................................................................................................................241137.00137017700010191502400000
......................................................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT......................................................................................................................................201124.00124007300000201201900000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.......................................................................................................................................221121.001218285000116501300000
.......................................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT......................................................................................................................................19196.0096002500010191603500000
........................................................................................................................................................................................................................................................................................AGACCGAACACTCGTGCT......................................................................................................................................18181.008110370000019143700000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG.....................................................................................................................................24174.0074006400000350200000
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC......................................................................................................................................22167.0067006700000000000000
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTCTC....................................................................................................................................................................................................................21159.00590029001201590300000
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCC...................................................................................................................................................................................................................22158.0058005800000000000000
.................................................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG........................................................................................................................................23149.004900130000021150000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT.......................................................................................................................................22145.00451060000024140000000
..................................................................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGCT......................................................................................................................................24145.0045004100000200200000
.............................................................................................................................................................................................................................TTTTCCAAA-GAAA---------GGTT----TCGATCAA---------GCG................................................................................................................................................................28137.0037003000010510000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTG......................................................................................................................................23136.00360020000000001600000
.............................................................................................................................................................................................................................TTTTCCAAA-GAAA---------GGTT----TCGAT...............................................................................................................................................................................22136.0036003300000110100000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGG.........................................................................................................................................20136.0036003600000000000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT.....................................................................................................................................24135.0035003000000110300000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACT............................................................................................................................................17134.0034000000108250000000
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC.......................................................................................................................................21133.0033002400000410400000
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCG......................................................................................................................................22132.0032003200000000000000
.....................................................................................................................................................................................................ATGGCGAATGTCGGTATGGTC......................................................................................................................................................................................................................21129.00290015000000101300000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC......................................................................................................................................23127.0027002400000000300000
..........................................................................................................................................................................................................................................................................................ACCGAACACTCGTGCT......................................................................................................................................16127.0027000000001980000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACAC.............................................................................................................................................16125.00250000000010150000000
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTCT.....................................................................................................................................................................................................................20115.001500900010220100000
.................................................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGT.........................................................................................................................................22115.0015001000000000500000
droSec2
CAACTAC----------AAATC-A-AC--------------------------------------------------------------------AATCAAAAAA---------TCAAGAGTAAGTTATATT-GGG--------CAC----------------------T-C---------CAG-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCA-A-TAAA---------GGTT----TCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------------GT------GAAGT-TGCAAGTGAAA-------------CT---TC------------------------------------AAATA-T-TCTGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT......................................................................................................................................231271567.002715671362212640486136
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.......................................................................................................................................22110716.001071666310498149
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT.....................................................................................................................................2412288.00228873225523
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG........................................................................................................................................2111158.001158102112818
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC......................................................................................................................................231482.004824046612
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.......................................................................................................................................221440.00440114326
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA.....................................................................................................................................241333.00333603189
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT......................................................................................................................................221204.002041030992
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT....................................................................................................................................251192.00192201873
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT.........................................................................................................................................201140.00140221333
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA......................................................................................................................................23188.008841785
.....................................................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT......................................................................................................................................21173.007340681
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG......................................................................................................................................23152.005210510
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC.....................................................................................................................................24148.004800471
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT.......................................................................................................................................22145.004540392
.............................................................................................................................................................................................................................TTTTCCA-A-TAAA---------GGTT----TCGATCAA---------GCG................................................................................................................................................................27134.003420311
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCT...................................................................................................................................................................................................................22132.003250270
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.......................................................................................................................................22122.002202182
........................................................................................................................................................................................................................................................................................AGACCGAACACTCGTGCT......................................................................................................................................18121.002100210
......................................................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT......................................................................................................................................20121.002110200
.......................................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT......................................................................................................................................19120.002010190
.............................................................................................................................................................................................................................TTTTCCA-A-TAAA---------GGTT----TCGATCAA---------GC.................................................................................................................................................................26118.001800180
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTC...........................................................................................................................................18116.001630130
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG..........................................................................................................................................19116.001610150
.............................................................................................................................................................................................................................TTTTCCA-A-TAAA---------GGTT----TCGATCAA---------G..................................................................................................................................................................25112.001200120
.................................................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGT.........................................................................................................................................2219.0090090
.....................................................................................................................................................................................................ATGGCGAATGTCGGTATGGTC......................................................................................................................................................................................................................2119.0090081
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG.....................................................................................................................................2419.0091080
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC.......................................................................................................................................2117.0072050
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA......................................................................................................................................2316.0060060
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCTCT........................................................................................................................................2116.0061041
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC......................................................................................................................................2315.0050050
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGGCT.......................................................................................................................................2214.0040040
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTT........................................................................................................................................2113.0030030
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGCCT.......................................................................................................................................2213.0030030
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT.....................................................................................................................................2413.0030030
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCAT.....................................................................................................................................2413.0030021
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTCT.....................................................................................................................................................................................................................2013.0030030
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAA....................................................................................................................................2513.0030030
.................................................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG........................................................................................................................................2313.0030030
.............................................................................................................................................................................................................................TTTTCCA-A-TAAA---------GGTT----TCGATCAA---------GCGA...............................................................................................................................................................2812.0020020
.............................................................................................................................................................................................................................TTTTCCA-A-TAAA---------GGTT----TCGATCA.............................................................................................................................................................................2312.0020020
.....................................................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCTT.....................................................................................................................................2212.0020020
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCTT.....................................................................................................................................2312.0020020
droYak3
CGACGCAGCTA-----CAAATC-A-AC---------------------------------------------------------------AGT--AA--------TG-CAAAAGAGAAGAGTAAGTGTTA-T-AGG--------CAC----------------------T-C---------CAG-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-A----AGA-------GGTT----TCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------------GT------GAAGT-TGCAAGTGAAAT-------------T-AATC------------------------------------AGATA-CTGGGGSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT......................................................................................................................................2311113308.00111330841019110027701097537210740010
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC......................................................................................................................................231264917.002649177702646062340000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.......................................................................................................................................22156464.005646457125223441544300000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT.....................................................................................................................................24112894.001289441122915941300000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC......................................................................................................................................2314780.00478010477630000000
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCT...................................................................................................................................................................................................................2212118.002118212088270000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG......................................................................................................................................2311773.0017731501702541100000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC.....................................................................................................................................2411451.001451001425250100000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.......................................................................................................................................2211083.001083107882940000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG........................................................................................................................................211892.00892336732111100000
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCC...................................................................................................................................................................................................................221709.007090070900000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA.....................................................................................................................................241530.0053010464650000000
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT......................................................................................................................................221468.0046809416420100000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC......................................................................................................................................231213.002130021210000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.......................................................................................................................................221203.002030019580000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG..........................................................................................................................................191195.001954018920000000
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTCTC....................................................................................................................................................................................................................211169.001690016540000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA......................................................................................................................................231168.0016802146191000000
..................................................................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGCT......................................................................................................................................241136.001360013420000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT.........................................................................................................................................201118.001181087300000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT.......................................................................................................................................221115.001150011500000000
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC......................................................................................................................................22195.0095009500000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT.....................................................................................................................................24177.0077007160000000
.......................................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT......................................................................................................................................19175.00750059150100000
.....................................................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT......................................................................................................................................21168.00680047201000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT....................................................................................................................................25157.00570128270100000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGGC......................................................................................................................................23155.0055005500000000
......................................................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT......................................................................................................................................20154.0054004860000000
droEre2
CGACGCAACTA-----CAAATC-A-AC---------------------------------------------------------------AAC--A-------AATG---------CAGAGTAAGTGTTA-T-AGG--------CAC----------------------T-G---------CAG-TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-A----GAA-------GGTT----TCGATCGA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCACA-------C-----TGT------GAAGT-TGCGAGTGAAA------------------------ACAAA---------------------------A------GATACSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT......................................................................................................................................231107629.001076293537544691495304817
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC......................................................................................................................................23110737.001073719105590158010
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.......................................................................................................................................2219280.0092801836142029420130
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT.....................................................................................................................................2411090.001090457390302130
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG........................................................................................................................................211930.00930534500427000
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT......................................................................................................................................221335.0033528225028000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.......................................................................................................................................221287.002872750210000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC......................................................................................................................................231157.00157015700000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG......................................................................................................................................231150.00150067083000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT.........................................................................................................................................201142.001421230116020
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCT...................................................................................................................................................................................................................22193.0093206409000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA.....................................................................................................................................24185.00851351021000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC.....................................................................................................................................24183.0083161021000
.....................................................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT......................................................................................................................................21154.0054926019000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.......................................................................................................................................22137.0037126010000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA......................................................................................................................................23131.0031216011020
.......................................................................................................................................................................................................GGCGAATGTCGGTATGGTCTCC...................................................................................................................................................................................................................22125.002502500000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG..........................................................................................................................................19124.002401806000
......................................................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT......................................................................................................................................20120.00207508000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC......................................................................................................................................23117.001701403000
.......................................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT......................................................................................................................................19116.001621013000
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC.......................................................................................................................................21114.00149401000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT....................................................................................................................................25112.00121209000
.....................................................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGC.......................................................................................................................................20111.00113305000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT.......................................................................................................................................2219.0093600000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG.....................................................................................................................................2419.0095202000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT.....................................................................................................................................2417.0070304000
dp5
CAACAAGTGTA-----CAAGAA-----TGGCGAT---------------------AA-----AGTGTGTGTGTCGCAGAAA----------------------------------------------------AAG--------AAG----------------------A-C---------AAA-TTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACC-A----G---------GGTT----CCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCCA------ACC----AGTGAC----------GAAAGTGACAA--------AAGT-------GAAAA---AAGTGACAAAGTTTGTGTACACTCCA--CGAGT-T-GATASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT......................................................................................................................................231197384.00197384133833115522589773971221015
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.......................................................................................................................................22199256.009925622251671405629785011218
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC......................................................................................................................................23129723.00297230172935012922700000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG........................................................................................................................................21113749.00137490106060060667701050
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.......................................................................................................................................2214474.00447408615280285900001
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT.....................................................................................................................................2412419.0024190801631670100010
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT.........................................................................................................................................201946.00946028163075401000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC......................................................................................................................................231781.00781007801000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.......................................................................................................................................221425.0042501032109400000
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT......................................................................................................................................221385.0038503113703700000
.......................................................................................................................................................................................................GGCGATTGTCGGTTTGGTCGCT...................................................................................................................................................................................................................221347.0034701626306800000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA......................................................................................................................................231324.0032402122118100000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG......................................................................................................................................231287.002870119868200000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC.....................................................................................................................................241287.002870325412801000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA.....................................................................................................................................241273.00273013152010800000
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC.......................................................................................................................................211239.0023902042001500000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG..........................................................................................................................................191206.002060615414500000
.......................................................................................................................................................................................................GGCGATTGTCGGTTTGGTCGC....................................................................................................................................................................................................................211163.001637211902504060
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC......................................................................................................................................231124.001240110901400000
.......................................................................................................................................................................................................GGCGATTGTCGGTTTGGTCGCC...................................................................................................................................................................................................................221106.00106001050100000
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTG........................................................................................................................................20193.009308820300000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG.......................................................................................................................................22145.004502803500000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTC........................................................................................................................................21142.004200360600000
.....................................................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT......................................................................................................................................21138.0038091701200000
.............................................................................................................................................................................................................................TTTTACC-A----G---------GGTT----CCGATCAA---------GCGAAG.............................................................................................................................................................27134.003400300400000
.......................................................................................................................................................................................................GGCGATTGTCGGTTTGGTCG.....................................................................................................................................................................................................................20131.003113901215000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGC.........................................................................................................................................20129.002900260300000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTA........................................................................................................................................21129.002900200900000
.....................................................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGC.......................................................................................................................................20121.002109201000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA......................................................................................................................................23120.0020001001000000
.......................................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGC.......................................................................................................................................18120.002002101700000
droPer2
CAACAAGTGTA-----CAAGAA-----TGGCGAT---------------------AA-----AGTGTGTGTGTCGCAGAAA----------------------------------------------------AAG--------AAG----------------------A-C---------AAA-TTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACC-A----G---------GGTT----CCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCCA------ACC----AGTGAC----------GGAAGTGACAA--------AAGT-------GA----------------------------------AAAAA-G-TGACSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT......................................................................................................................................231112653.0011265392737218192824220192
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.......................................................................................................................................22137199.0037199307858362931316
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC......................................................................................................................................2317731.0077317692038010
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG........................................................................................................................................2116311.00631149963412270486
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG......................................................................................................................................2313635.0036353609024020
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG.......................................................................................................................................2212076.002076206907000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.......................................................................................................................................2211969.00196913842583000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT.....................................................................................................................................241665.006655104143080
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG..........................................................................................................................................191653.0065364417010
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT.........................................................................................................................................201533.005333821146031
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.......................................................................................................................................221378.00378363213000
.......................................................................................................................................................................................................GGCGATTGTCGGTTTGGTCGC....................................................................................................................................................................................................................211160.00160134040022
.......................................................................................................................................................................................................GGCGATTGTCGGTTTGGTCGCT...................................................................................................................................................................................................................221109.0010998011000
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT......................................................................................................................................22194.009461248010
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC......................................................................................................................................23187.00878601000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA.....................................................................................................................................24186.008669017000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA......................................................................................................................................23182.008254025030
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTC...........................................................................................................................................18165.00656500000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT.....................................................................................................................................24146.00464204000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGG.........................................................................................................................................20141.00414100000
.......................................................................................................................................................................................................GGCGATTGTCGGTTTGGTCG.....................................................................................................................................................................................................................20135.00353003002
.....................................................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT......................................................................................................................................21133.00332229000
......................................................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT......................................................................................................................................20124.00242301000
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC.......................................................................................................................................21123.00231364000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC.....................................................................................................................................24119.00191306000
.......................................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT......................................................................................................................................19113.0013508000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAA......................................................................................................................................23112.00121200000
.......................................................................................................................................................................................................GGCGATTGTCGGTTTGGTCGCC...................................................................................................................................................................................................................22110.00101000000
.......................................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGC.......................................................................................................................................1819.009009000
.....................................................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGC.......................................................................................................................................2018.008602000
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTG........................................................................................................................................2018.008431000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTA........................................................................................................................................2118.008602000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA......................................................................................................................................2317.007403000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCG.....................................................................................................................................2416.006600000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGC.........................................................................................................................................2016.006600000
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC......................................................................................................................................2215.005500000
......................................................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGC.......................................................................................................................................1915.005302000
........................................................................................................................................................................................................................................................................................AGACCGAACACTCGTGCT......................................................................................................................................1814.004301000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCT..........................................................................................................................................1914.004400000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTC........................................................................................................................................2114.004103000
.................................................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG........................................................................................................................................2313.003012000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGGG......................................................................................................................................2313.003300000
.......................................................................................................................................................................................................GGCGATTGTCGGTTTGGTC......................................................................................................................................................................................................................1913.003200001
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCG......................................................................................................................................2213.003300000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCC.....................................................................................................................................2413.003300000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG.....................................................................................................................................2413.003300000
droWil2
CAACCCA----AAAAGTTAGCCAA------------------------------------------------------CCAAA-----C----------------------------TTAGTGAGTGACTAT---G--------CAA-------------TTGAA----A-T---------TAC-TTTTAAAATTGAATGGCGATTGTCGGTATAGTCTCTTTTTCCA-A----AAATCTTGTTTGTTTTTGCCAATCTA------ATAAGAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCAAC-------------AAC------CAACA-AGCTAGTGAGAA--------GAAT-------T-----------------------------------AA-CT-T-TAACSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT......................................................................................................................................231463839.00463839674107864596932388
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.......................................................................................................................................22146657.0046657142175046072268
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.......................................................................................................................................2215681.0056818100564617
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT.....................................................................................................................................2415244.0052444211520414
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG........................................................................................................................................2115172.00517221320510118
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA.....................................................................................................................................2411257.001257016012392
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC......................................................................................................................................231683.0068376106006
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT.........................................................................................................................................201590.005901015799
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA......................................................................................................................................231568.005680705592
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT......................................................................................................................................221367.0036719202731
.......................................................................................................................................................................................................GGCGATTGTCGGTATAGTCTCT...................................................................................................................................................................................................................221292.002920002911
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA......................................................................................................................................231143.001430001430
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG......................................................................................................................................231114.001142200920
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC.....................................................................................................................................241100.00100110980
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.......................................................................................................................................22196.0096110940
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT.......................................................................................................................................22192.0092000920
.................................................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGT.........................................................................................................................................22187.0087000870
.....................................................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT......................................................................................................................................21172.0072030690
.......................................................................................................................................................................................................GGCGATTGTCGGTATAGTCTC....................................................................................................................................................................................................................21172.0072000720
.................................................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG........................................................................................................................................23153.0053010520
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT....................................................................................................................................25152.0052000520
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC.......................................................................................................................................21137.00370140230
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG.....................................................................................................................................24137.0037010360
........................................................................................................................................................................................................................................................................................AGACCGAACACTCGTGCT......................................................................................................................................18128.0028000271
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCAT.....................................................................................................................................24126.0026010250
....................................................................................................................................................................................................AATGGCGATTGTCGGTATAGTC......................................................................................................................................................................................................................22124.0024000240
.......................................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT......................................................................................................................................19123.0023000221
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG..........................................................................................................................................19122.0022410170
.........................................................................................................................................................................................................CGATTGTCGGTATAGTCTCTTT.................................................................................................................................................................................................................22120.0020000200
......................................................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT......................................................................................................................................20119.0019000190
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC......................................................................................................................................23118.0018000180
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG.......................................................................................................................................22117.0017100070
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCTA.....................................................................................................................................23117.0017030140
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCTT.....................................................................................................................................23115.0015030120
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTC........................................................................................................................................21114.0014000140
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCTGC........................................................................................................................................21113.0013000130
....................................................................................................................................................................................................AATGGCGATTGTCGGTATAGT.......................................................................................................................................................................................................................21111.0011000110
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT.....................................................................................................................................24111.0011000110
.....................................................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGC.......................................................................................................................................20110.001001090
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTT........................................................................................................................................21110.0010000100
......................................................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGC.......................................................................................................................................1919.00901080
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTAT.......................................................................................................................................2218.00800080
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTG......................................................................................................................................2318.00800080
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTTT.......................................................................................................................................2218.00800080
.................................................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCG..........................................................................................................................................2117.00700070
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCGT.....................................................................................................................................2416.00600060
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGCCT.......................................................................................................................................2216.00600060
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTC...........................................................................................................................................1815.00503020
.......................................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGC.......................................................................................................................................1815.00501040
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGT.......................................................................................................................................2115.00502030
..................................................................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGCT......................................................................................................................................2415.00502030
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTG........................................................................................................................................2014.00402020
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTAT.....................................................................................................................................2414.00400040
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCC.....................................................................................................................................2414.00420020
..................................................................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTG........................................................................................................................................2214.00401030
.................................................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTGA.......................................................................................................................................2414.00400040
.................................................................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTT........................................................................................................................................2314.00400040
.......................................................................................................................................................................................................GGCGATTGTCGGTATAGTCTCTT..................................................................................................................................................................................................................2314.00400040
................................................................................................................................................................................................................................................................................AAGTGACTAGACCGAACACTCGT.........................................................................................................................................2314.00400040
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGGCT.......................................................................................................................................2214.00400040
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTA........................................................................................................................................2113.00300030
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAA......................................................................................................................................2313.00300030
droVir3
GAGAAAA----TAACG-CAGCT---------------CAGATATTCCAGTGTTT--------------------------------------------------------------C------AGTGTGA---CAGTGTTCCAGTATTCCAGTGTTTCAATTCCAATATTCCA--------GTA-TTTTAAAATTAAATGGCGATTGTCGGTATGGTCGCTTTTTCAA-A----CAA-------TATA----CCATT-AT-----CTATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACGTATATAAAAAGCACA----AGTTCTCG----------ATTTGATAA--------CCGT-------CG------------CAATATATATATATAT---ATATA--TC-TATATSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT......................................................................................................................................2312436012.00243601271716461968720113010036335842141414210542562106931859116038191995114939761017122119616719622587918222315371629890114230826462312211078624908047251036028924173063299209540014372398629064112856946104861788420453227931018411169
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.......................................................................................................................................22144003.0044003821106656200000000291001000300010000031601927674200524154305922253161255121084079211638541863125013859859203038146600000156176742101366911669614593334379
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC......................................................................................................................................23116543.001654370226013539000000000000000000000000000000104200001526115424918216127315224310749767200014966000002010296300000921933712
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG..........................................................................................................................................19115114.00151148802100000000000000000000000000000000310037741456115514601137993208996718768185196005514501218100000710350011012118201610
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG......................................................................................................................................23110567.0010567546501370000000001000000000000000000000010003545904655102284053810405631125703416623503420119647100001435000001971322
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.......................................................................................................................................2217294.0072943307400000000001000000000000000001007812120145833623253742336563540677831123223017820059149800000252313014100310114512076106
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT.....................................................................................................................................2416460.00646041116800000000012000100010000000000190297813254100092322133002432384542434072401631751591004154871200020281203022009467693336
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC.....................................................................................................................................2415195.005195020107500000000000000000010000012001003150003262732244013071643192684752621611791441005631830200013142740002116273357
.......................................................................................................................................................................................................GGCGATTGTCGGTATGGTCGCT...................................................................................................................................................................................................................2212134.00213400085000000001700000000000000000060641232585990000201601021142712011100014400000404516200203011853587578
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA.....................................................................................................................................2411732.00173201118900000000000001010000000010002502267118100000071038910990721285510048302821000316200000148600422103535391419
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG........................................................................................................................................2111460.00146010140294000000000100010020000000442122410148010063942475747575079403038280008618910000612462130433840432824
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA......................................................................................................................................2311130.001130000830000000000000000000000000000405422600002442864502355275231283715010723000000362818700000110224332313
.......................................................................................................................................................................................................GGCGATTGTCGGTATGGTCGC....................................................................................................................................................................................................................211676.00676100240000000000000000000000000000001003000017127105493325512846161911120001630000035112001001016141215
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.......................................................................................................................................221635.0063510060000000000000000000000000000000001000000403544442271287018181616000229000004820000000152526913
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG.......................................................................................................................................221558.0055847050000000000000000000000000000000000000023425595023513563312246240006330000000101000013230
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC......................................................................................................................................231533.0053300013900000000000000000000000000000000000000127233340163022423721291700026260000000200000000200
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC......................................................................................................................................231409.0040906025700000000000000000000000000000000100000071942931671211000110000010400000030000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT.....................................................................................................................................241393.0039300050000000000000000000000000000000010000011516303219532158281729180004400000000200000010021
..................................................................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGCT......................................................................................................................................241315.0031500070000000000000000000000000000000002000004962182183683064360009000000118000000128763
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAG......................................................................................................................................231151.001510006000000000000000000000000000000000000614899152257217678000250000000200000000100
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT.........................................................................................................................................201145.00145000120100000001000000010000000000020200000006243394620110009440000003800002075313
......................................................................................................................................................................................................TGGCGATTGTCGGTATGGTCGC....................................................................................................................................................................................................................221141.00141000400000000000000000000000000000000010000018766101661842640001050000011500000021431
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT......................................................................................................................................221126.001261013100000000000000000000000000000000100000076624163123200031200000102000001171534
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTC...........................................................................................................................................181110.00110000300000000000000000000000000000000000001116811931241341640001200000000200000000000
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG.....................................................................................................................................241105.001050001300000000000000000000000000001000000000078443123133752000740000010100000020311
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAA......................................................................................................................................23187.008700040000000000000000000000000000000110000019373413331164000100000000600000134710
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA......................................................................................................................................23170.007000017000000000000000000000000000010013000000332333231020000290000010300000024110
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACT............................................................................................................................................17167.0067000000000000000000000000000000000000000000131100212002001000000001121000000201153
.....................................................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT......................................................................................................................................21154.005400022000000000100000000000000000000001000000011015132111000660000001000000000000
.......................................................................................................................................................................................................GGCGATTGTCGGTATGGTCG.....................................................................................................................................................................................................................20153.005300010000000001000000000000000000000000000000000000000000000600000318000000306123
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTG......................................................................................................................................23145.00450001000000000000000000000000000000001000010111445352223000010000000300000011300
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTTT.......................................................................................................................................22142.00420003000000000000000000000000000000000000001116046252020000330000000100000001010
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT....................................................................................................................................25136.00360006000000000000000000000000000000058400000110202011000000032000000000000000000
.......................................................................................................................................................................................................GGCGATTGTCGGTATGGTCGCC...................................................................................................................................................................................................................22135.003500033000000000000000000000000000000000000000100000000000000000000000100000000000
......................................................................................................................................................................................................TGGCGATTGTCGGTATGGTCGCT...................................................................................................................................................................................................................23131.00310001000000000000000000000000000000101500001111011000000000000000040400000012132
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTGT.....................................................................................................................................24128.00280002000000000000000000000000000000000000000120141040421000220000000000000000101
..................................................................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGC.......................................................................................................................................23128.00280007000000000000000000000000000000000000000040001000000000000000003500000031112
......................................................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT......................................................................................................................................20126.00260002000000000000000000000000000000000000000220036041002100120000000000000000000
droMoj3
GCACAAA----GGAGG--AG------------TGTTTCAG---TTCCAGTGTTT--------------------------------------------------------------CACTAT-----------CAGTGTTTCAC--TTTCAGTGTTTCATTTCCAGTGTTCGAAAATTATAAAA-TTTTAAAATTAAATGGCGATTGTCGGTATGGTCTCTTTTTCAA-C----ATA-------TA--------CACCAAACATTCTATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAATTTCA------ATT-----AT------AAAAT-TTCTAGTGCATG-GTTCAAA----CT---TA--AAA---AGAAAACAA-------------------AA--TC-TATATSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT......................................................................................................................................2311201864.00120186419135541225106626611
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC......................................................................................................................................231229220.002292200225002289950
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.......................................................................................................................................221172966.00172966913735201592200
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT.....................................................................................................................................24124007.00240070144610225591
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.......................................................................................................................................22110104.0010104026050074990
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC.....................................................................................................................................2416588.00658812340063521
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG........................................................................................................................................2114274.00427427120035600
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC......................................................................................................................................2313832.003832020038300
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA.....................................................................................................................................2413555.00355513610031930
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG......................................................................................................................................2311832.0018320840017480
.......................................................................................................................................................................................................GGCGATTGTCGGTATGGTCTCT...................................................................................................................................................................................................................2211086.0010860100010760
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA......................................................................................................................................2311020.001020075009450
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT......................................................................................................................................221930.00930358008690
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.......................................................................................................................................221776.00776027017480
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC......................................................................................................................................231494.0049409004850
.......................................................................................................................................................................................................GGCGATTGTCGGTATGGTCTCC...................................................................................................................................................................................................................221382.0038200003820
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCG..........................................................................................................................................191325.0032507003180
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTTC....................................................................................................................................251277.00277010002670
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT....................................................................................................................................251241.00241072001690
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT.........................................................................................................................................201237.00237296001390
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC......................................................................................................................................221217.0021700002170
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT.......................................................................................................................................221170.0017001001690
.......................................................................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT......................................................................................................................................191159.00159047001120
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG.....................................................................................................................................241136.00136014001220
.....................................................................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT......................................................................................................................................211136.00136013001230
.......................................................................................................................................................................................................GGCGATTGTCGGTATGGTCTC....................................................................................................................................................................................................................211118.0011804001140
....................................................................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC.......................................................................................................................................211116.0011608001080
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTCC....................................................................................................................................251103.001030500980
......................................................................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT......................................................................................................................................20198.009801100870
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT.....................................................................................................................................24180.00800700730
droGri2
AAGAAAA----GAATATAAAA------TGGTGAA-------TTTTGCAGTGTTTTGCAGTGTTTTGTGTGTGTTGCAGTCAAA-----CC------------------------------------------------------CAG----------------------C-CA--------GTA-TTTTAAAATTAAATGGCGATTGTCGGTATGGTCGCTTTTGAAC-CTA-A--ACTCT---ATAT----ACAATA--------TATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACATAGGCA-------TC----AGTTTTGGTTAAAT-GAAAAATGATA-------------AA---TC------------------------------------GA--TC-TATATSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT......................................................................................................................................23219.0038533
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.......................................................................................................................................2221.50321
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG........................................................................................................................................2121.00220
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA......................................................................................................................................2320.50101
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.......................................................................................................................................2220.50110
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT.....................................................................................................................................2420.50101
...................................................................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT.........................................................................................................................................2020.50101

Generated: 10/20/2015 at 07:39 PM