ID:

dan-mir-275

 Coordinate:

scaffold_12916:15333995-15334081 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-42.9

Flybase annnotation

pre_miRNA [Dana\mir-275-RM]; miRNA [Dana\miR-275-RA]

No Repeatable elements found

Sense Strand Reads

TTCTTTTTTTTTATATATCTACATCTTCAACTTCAAGTCCAGCACTCTCCAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTGCAACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCAGACATATATCCGCCATACAAAAGTATATAATGCAAATCCTTCAGAAAATCCCACT

*************************************************..((((.(((((.(((((((((.((((..(((..(((((..........))))).)))..))))..))))))))).))))).))))...************************************************* 		Read size # Mismatch Hit Count Total Norm Total M044

female body

 M058

embryo

 V105

male body		 V106

head

 V039

embryo

 V055

head
.....................................................................................................TCAGGTACCTGAAGTAGCGCGC................................................................ 22 0 1 250221.00 250221 102928 125055 9396 7443 2854 2545
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCG............................................................... 23 0 1 248276.00 248276 216149 14826 6952 7541 455 2353
.....................................................................................................TCAGGTACCTGAAGTAGCGCG................................................................. 21 0 1 92111.00 92111 25949 37295 19199 2244 6260 1164
.....................................................................................................TCAGGTACCTGAAGTAGCGC.................................................................. 20 0 1 22089.00 22089 3243 13204 3956 652 705 329
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCGT.............................................................. 24 0 1 20328.00 20328 17421 971 340 1533 10 53
......................................................................................................CAGGTACCTGAAGTAGCGCGCG............................................................... 22 0 1 12472.00 12472 12266 108 21 66 1 10
.....................................................................................................TGAGGTACCTGAAGTAGCGCGC................................................................ 22 1 1 8783.00 8783 17 8751 13 1 1 0
.....................................................................................................TCAGGTACGTGAAGTAGCGCGCG............................................................... 23 1 1 7865.00 7865 7861 0 1 2 0 1
......................................................................................................CAGGTACCTGAAGTAGCGCGC................................................................ 21 0 1 6927.00 6927 6371 467 31 40 6 12
.....................................................................................................TCAGGTACCTGAAGTAGCGCGT................................................................ 22 1 1 6778.00 6778 3278 1485 1525 262 74 154
.....................................................................................................TCAGGTACCTGAAGTAGCGCGA................................................................ 22 1 1 4804.00 4804 1030 2976 437 69 279 13
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCGA.............................................................. 24 1 1 4626.00 4626 2909 1402 55 229 25 6
.....................................................................................................TCAGGTACGTGAAGTAGCGCGC................................................................ 22 1 1 3820.00 3820 3804 10 4 1 0 1
.....................................................................................................TCAGGTACATGAAGTAGCGCGCG............................................................... 23 1 1 3328.00 3328 3272 21 11 19 2 3
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCT............................................................... 23 1 1 3165.00 3165 2434 443 156 79 14 39
.....................................................................................................TGAGGTACCTGAAGTAGCGCG................................................................. 21 1 1 2545.00 2545 4 2507 32 1 0 1
.....................................................................................................TCAGGTACCTGAAGTAGCG................................................................... 19 0 1 2280.00 2280 797 446 932 27 24 54
.....................................................................................................TCAGGTACATGAAGTAGCGCGC................................................................ 22 1 1 1882.00 1882 1666 178 9 17 3 9
................................................................CGCGCTAATCAGTGACCGGGGCT.................................................................................................... 23 0 1 1808.00 1808 1060 49 268 378 2 51
.....................................................................................................TCAGGTACTTGAAGTAGCGCGCG............................................................... 23 1 1 1696.00 1696 1688 4 2 1 0 1
......................................................................................................CAGGTACCTGAAGTAGCGCG................................................................. 20 0 1 1684.00 1684 1509 148 14 6 4 3
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT............................................................. 25 1 1 1565.00 1565 1335 16 49 160 1 4
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCA............................................................... 23 1 1 1525.00 1525 654 709 71 41 36 14
.....................................................................................................TTAGGTACCTGAAGTAGCGCGC................................................................ 22 1 1 1296.00 1296 22 1253 10 7 3 1
.....................................................................................................TCAGGGACCTGAAGTAGCGCGC................................................................ 22 1 1 1223.00 1223 24 1055 14 12 42 76
.....................................................................................................TGAGGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 1191.00 1191 30 1149 7 3 0 2
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCGC.............................................................. 24 1 1 1137.00 1137 814 266 8 45 0 4
.....................................................................................................TCATGTACCTGAAGTAGCGCGC................................................................ 22 1 1 1131.00 1131 39 1027 14 44 6 1
.....................................................................................................TCAGGTACGTGAAGTAGCGCG................................................................. 21 1 1 1094.00 1094 1083 2 7 0 2 0
......................................................................................................CAGGTACCTGAAGTAGCGCGCGT.............................................................. 23 0 1 972.00 972 936 8 0 27 0 1
.......................................................................................................AGGTACCTGAAGTAGCGCGCG............................................................... 21 0 1 886.00 886 797 24 9 36 3 17
.....................................................................................................TGAGGTACCTGAAGTAGCGC.................................................................. 20 1 1 882.00 882 0 876 5 1 0 0
.....................................................................................................TCAGGTACCTGAAGTAGCGCAC................................................................ 22 1 1 878.00 878 18 717 82 53 6 2
.....................................................................................................TCAGGTACCTGAAGTGGCGCGCG............................................................... 23 1 1 837.00 837 645 5 93 71 0 23
.....................................................................................................TCAGGTACTTGAAGTAGCGCGC................................................................ 22 1 1 830.00 830 756 65 4 1 0 4
.....................................................................................................GCAGGTACCTGAAGTAGCGCGC................................................................ 22 1 1 742.00 742 305 422 1 1 3 10
.....................................................................................................GCAGGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 709.00 709 649 44 9 1 0 6
.....................................................................................................TCAGGTACGTGAAGTAGCGCGCGT.............................................................. 24 1 1 684.00 684 683 0 0 1 0 0
.....................................................................................................TCAGGTACATGAAGTAGCGCG................................................................. 21 1 1 625.00 625 506 59 39 7 9 5
.....................................................................................................TCAGGTACCTGAAGTAGCGCGGG............................................................... 23 1 1 582.00 582 577 2 0 2 1 0
.......................................................................................................AGGTACCTGAAGTAGCGCGC................................................................ 20 0 1 556.00 556 352 133 17 18 17 19
.....................................................................................................TCAGGTACCTGACGTAGCGCGC................................................................ 22 1 1 555.00 555 4 506 24 3 14 4
.....................................................................................................TCAGGTACCTGAAGTAGCGCGTT............................................................... 23 2 1 553.00 553 325 16 167 21 0 24
.....................................................................................................TCAGGGACCTGAAGTAGCGCG................................................................. 21 1 1 530.00 530 4 336 34 4 123 29
.....................................................................................................TCAGGTACCTGAAGTATCGCGC................................................................ 22 1 1 508.00 508 73 121 111 142 54 7
.....................................................................................................TCAGGTACCTGAAGTGGCGCGC................................................................ 22 1 1 506.00 506 263 36 141 41 3 22
.....................................................................................................TCAGGTACCTGAAGTAGCGCC................................................................. 21 1 1 488.00 488 32 341 74 5 33 3
......................................................................................................CAGGTACCGGAAGTAGCGCGCG............................................................... 22 1 1 483.00 483 483 0 0 0 0 0
.....................................................................................................CCAGGTACCTGAAGTAGCGCGC................................................................ 22 1 1 482.00 482 76 376 7 10 6 7
.....................................................................................................TCAGGTAACTGAAGTAGCGCGC................................................................ 22 1 1 480.00 480 4 461 2 2 7 4
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCC............................................................... 23 1 1 461.00 461 115 303 18 9 9 7
.....................................................................................................TCAGGTACCTGAAGTAGCGCGAG............................................................... 23 1 1 421.00 421 266 41 45 64 1 4
.....................................................................................................TCAGGTACCTGAAGTAGCGCA................................................................. 21 1 1 417.00 417 29 99 236 19 30 4
.....................................................................................................TCAGGTACCTGAAGTATCGCG................................................................. 21 1 1 407.00 407 16 38 227 55 66 5
....................................................................................................CTCAGGTACCTGAAGTAGCGCGC................................................................ 23 1 1 399.00 399 136 259 1 1 1 1
.....................................................................................................TCAGTTACCTGAAGTAGCGCGC................................................................ 22 1 1 398.00 398 148 217 14 15 4 0
.....................................................................................................TTAGGTACCTGAAGTAGCGCG................................................................. 21 1 1 397.00 397 2 367 22 1 4 1
.....................................................................................................TCAGGTACCTGAAGTAGCTCGC................................................................ 22 1 1 380.00 380 25 172 59 84 37 3
.....................................................................................................TCAGGTACCTGAAGTAGCGCT................................................................. 21 1 1 366.00 366 33 78 205 18 29 3
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCTT.............................................................. 24 1 1 366.00 366 248 18 36 59 1 4
.....................................................................................................TCAGTTACCTGAAGTAGCGCGCG............................................................... 23 1 1 363.00 363 308 29 6 17 1 2
.....................................................................................................ACAGGTACCTGAAGTAGCGCGC................................................................ 22 1 1 359.00 359 100 250 4 0 1 4
.....................................................................................................TCATGTACCTGAAGTAGCGCG................................................................. 21 1 1 354.00 354 7 286 31 12 17 1
.....................................................................................................TCAGGTACCTGAAGCAGCGCGC................................................................ 22 1 1 352.00 352 57 219 12 14 25 25
.....................................................................................................TCAGGTACCTGAAGTAGCGCTC................................................................ 22 1 1 352.00 352 34 129 96 74 14 5
....................................................................................................CTCAGGTACCTGAAGTAGCGCGCG............................................................... 24 1 1 347.00 347 305 38 1 0 2 1
.....................................................................................................TCAGGTACCTGAAGTAGCGCGG................................................................ 22 1 1 328.00 328 274 36 5 5 7 1
.....................................................................................................TCAGGTACCTGAAGAAGCGCGC................................................................ 22 1 1 327.00 327 44 257 6 4 4 12
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT............................................................ 26 2 1 321.00 321 263 5 8 45 0 0
................................................................CGCGCTAATCAGTGACCGGGG...................................................................................................... 21 0 1 320.00 320 235 9 21 43 5 7
................................................................CGCGCTAATCAGTGACCGGGGC..................................................................................................... 22 0 1 319.00 319 192 28 11 82 4 2
.....................................................................................................TCAGGTACATGAAGTAGCGCGCGT.............................................................. 24 1 1 317.00 317 315 0 0 2 0 0
.....................................................................................................TCAGGTACCTGAAGTAGCGCGTG............................................................... 23 1 1 307.00 307 272 5 9 15 1 5
.....................................................................................................TCAGGTACCTGAAGTATCGCGCG............................................................... 23 1 1 306.00 306 85 8 71 131 4 7
.....................................................................................................TCATGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 295.00 295 106 132 17 34 2 4
.....................................................................................................TCAGGGACCTGAAGTAGCGCGCG............................................................... 23 1 1 294.00 294 47 141 12 26 9 59
.....................................................................................................TCCGGTACCTGAAGTAGCGCGC................................................................ 22 1 1 287.00 287 4 276 4 0 2 1
.....................................................................................................TCAGGCACCTGAAGTAGCGCGC................................................................ 22 1 1 280.00 280 44 160 18 9 9 40
.....................................................................................................TCAGGTACTTGAAGTAGCGCG................................................................. 21 1 1 275.00 275 235 23 10 1 5 1
.....................................................................................................TCAGGTACCTGAAGTAGCGTGC................................................................ 22 1 1 274.00 274 30 217 8 8 5 6
.....................................................................................................TCAGGTACCTGAAGTGGCGCG................................................................. 21 1 1 260.00 260 68 12 142 23 5 10
......................................................................................................CAGGTACCTGAAGTAGCGC.................................................................. 19 0 1 258.00 258 199 51 6 2 0 0
......................................................................................................CAGGTACCGGAAGTAGCGCGC................................................................ 21 1 1 256.00 256 256 0 0 0 0 0
.....................................................................................................TCAGGTACCTGAAGTAGCGCTCG............................................................... 23 1 1 252.00 252 75 10 82 73 6 6
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCAA.............................................................. 24 2 1 251.00 251 115 126 1 4 5 0
.....................................................................................................GCAGGTACCTGAAGTAGCGCG................................................................. 21 1 1 248.00 248 84 144 9 0 9 2
.....................................................................................................ACAGGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 248.00 248 194 46 2 1 0 5
.....................................................................................................TCAGGTACCTGACGTAGCGCG................................................................. 21 1 1 240.00 240 1 141 61 0 28 9
.....................................................................................................CCAGGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 233.00 233 168 43 7 10 0 5
.....................................................................................................TCAGGTACCTGAAGTAGCTCG................................................................. 21 1 1 228.00 228 10 38 92 20 64 4
.....................................................................................................TCAGGTACGTGAAGTAGCGCGT................................................................ 22 2 1 225.00 225 224 0 1 0 0 0
......................................................................................................CAGGTACCTGAAGTAGCGCGCGA.............................................................. 23 1 1 222.00 222 203 15 0 4 0 0
.....................................................................................................TCAGGTACCCGAAGTAGCGCGC................................................................ 22 1 1 221.00 221 63 130 8 11 2 7
.....................................................................................................TCAGGTACCTGAAGTAGC.................................................................... 18 0 1 215.00 215 90 83 1 26 0 15
.....................................................................................................TGAGGTACCTGAAGTAGCGCGA................................................................ 22 2 1 206.00 206 0 206 0 0 0 0
.....................................................................................................TTAGGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 201.00 201 30 153 9 7 0 2
......................................................................................................CAGGTACCTGAAGTAGCGCGCT............................................................... 22 1 1 201.00 201 194 2 1 4 0 0
.....................................................................................................TCAGGTACCTGAAGTAGCTCGCG............................................................... 23 1 1 199.00 199 53 16 35 87 3 5
......................................................................................................CAGGTACCAGAAGTAGCGCGCG............................................................... 22 1 1 197.00 197 197 0 0 0 0 0
.....................................................................................................TCAGGTACCTGAATTAGCGCGCG............................................................... 23 1 1 197.00 197 137 21 19 8 6 6
.....................................................................................................TCAGGTACCTAAAGTAGCGCGC................................................................ 22 1 1 196.00 196 14 138 35 3 5 1
................................................................CGCGCTAATCAGTGACCGGGGCTT................................................................................................... 24 1 1 193.00 193 156 6 21 7 0 3
.....................................................................................................TCAGGTACCTGAATTAGCGCGC................................................................ 22 1 1 192.00 192 47 113 10 6 13 3
.......................................................................................................AGGTACCTGAAGTAGCGCG................................................................. 19 0 1 191.00 191 72 43 19 3 42 12
.....................................................................................................TCAGGTAACTGAAGTAGCGCG................................................................. 21 1 1 190.00 190 0 175 7 0 5 3
.....................................................................................................TCAGGTACCTGAAGTAGCGCACG............................................................... 23 1 1 189.00 189 42 10 87 45 0 5
.....................................................................................................TCAGGCACCTGAAGTAGCGCGCG............................................................... 23 1 1 181.00 181 114 18 10 6 1 32
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCGG.............................................................. 24 1 1 180.00 180 162 11 3 4 0 0
.....................................................................................................TCAGGTACCTGAAGCAGCGCGCG............................................................... 23 1 1 177.00 177 110 39 4 9 3 12
......................................................................................................CAGGTACCTGAAGTAGCGCGT................................................................ 21 1 1 170.00 170 162 5 1 1 0 1
.....................................................................................................CCAGGTACCTGAAGTAGCGCG................................................................. 21 1 1 167.00 167 26 118 10 2 10 1
....................................................................................................TTCAGGTACCTGAAGTAGCGCGCG............................................................... 24 1 1 166.00 166 166 0 0 0 0 0
.....................................................................................................TCGGGTACCTGAAGTAGCGCGC................................................................ 22 1 1 165.00 165 47 92 1 24 0 1
.....................................................................................................TCAGGTACGTGAAGTAGCGCGTG............................................................... 23 2 1 163.00 163 163 0 0 0 0 0
.....................................................................................................TCAGTTACCTGAAGTAGCGCG................................................................. 21 1 1 162.00 162 47 66 34 3 11 1
.....................................................................................................TCAGGTACCTGAAGTTGCGCGC................................................................ 22 1 1 160.00 160 5 138 14 2 0 1
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA............................................................. 25 1 1 158.00 158 113 9 7 29 0 0
.....................................................................................................TCAGGTACCCGAAGTAGCGCGCG............................................................... 23 1 1 158.00 158 111 15 10 12 2 8
.....................................................................................................TCAGGTACCTGAAGTAGCGCCC................................................................ 22 1 1 155.00 155 44 38 38 15 15 5
.....................................................................................................TCGGGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 155.00 155 124 9 0 17 0 5
.....................................................................................................TCAGGCACCTGAAGTAGCGCG................................................................. 21 1 1 155.00 155 9 54 28 3 41 20
.....................................................................................................TCAGGTACCTGAGGTAGCGCGCG............................................................... 23 1 1 155.00 155 110 9 23 6 2 5
.....................................................................................................TCAGGTACCTGCAGTAGCGCG................................................................. 21 1 1 153.00 153 1 7 63 1 73 8
....................................................................................................GTCAGGTACCTGAAGTAGCGCGCG............................................................... 24 0 1 151.00 151 151 0 0 0 0 0
.....................................................................................................TCAGGTACCTGAAGTAGCGCGTTT.............................................................. 24 2 1 150.00 150 74 1 47 22 2 4
.....................................................................................................TCAGGTACCTGAAGCAGCGCG................................................................. 21 1 1 150.00 150 13 60 28 5 35 9
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA............................................................ 26 3 1 146.00 146 60 86 0 0 0 0
.....................................................................................................TCAGGGACCTGAAGTAGCGC.................................................................. 20 1 1 145.00 145 0 106 6 0 19 14
.....................................................................................................TCAGGTACGTGAAGTAGCGC.................................................................. 20 1 1 141.00 141 137 2 2 0 0 0
....................................................................................................CTCAGGTACCTGAAGTAGCGCG................................................................. 22 1 1 139.00 139 41 91 0 0 7 0
.....................................................................................................TCAGGTACCTGGAGTAGCGCGC................................................................ 22 1 1 137.00 137 30 48 38 7 8 6
.....................................................................................................TCAGGTACCTGAAGTAGTGCGC................................................................ 22 1 1 136.00 136 20 98 3 7 6 2
................................................................CGCGCTAATCAGTGACCGGG....................................................................................................... 20 0 1 136.00 136 105 4 5 18 0 4
.....................................................................................................TCAGGTACCTGAAGTAGCGAG................................................................. 21 1 1 136.00 136 4 5 99 18 9 1
......................................................................................................TCAGTACCTGAAGTAGCGCGCG............................................................... 22 3 1 134.00 134 117 5 6 6 0 0
.....................................................................................................TCAGGTGCCTGAAGTAGCGCGC................................................................ 22 1 1 134.00 134 39 83 4 2 1 5
.....................................................................................................TCAGGTACCTGAAGGAGCGCGCG............................................................... 23 1 1 130.00 130 115 5 0 0 2 8
.....................................................................................................TCAGGTACCTGAAGAAGCGCGCG............................................................... 23 1 1 130.00 130 89 36 3 1 0 1
.....................................................................................................TCAGGTACCTGAAGTACCGCGC................................................................ 22 1 1 130.00 130 51 29 15 6 10 19
.....................................................................................................TCAGGTACTTGAAGTAGCGCGCGT.............................................................. 24 1 1 129.00 129 129 0 0 0 0 0
.....................................................................................................TCAGGTACCTGAAGGAGCGCGC................................................................ 22 1 1 129.00 129 63 26 5 6 13 16
.....................................................................................................TCAGGTACCTGAAGTAGCGAGCG............................................................... 23 1 1 127.00 127 26 2 28 65 1 5
.....................................................................................................TCAGGTACCTGAAGTAGCGT.................................................................. 20 1 1 127.00 127 13 74 34 2 1 3
.....................................................................................................TCAGGTACCTGAGGTAGCGCGC................................................................ 22 1 1 126.00 126 50 41 15 12 3 5
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCTA.............................................................. 24 2 1 126.00 126 76 31 7 7 5 0
.....................................................................................................TCAGGTACCTGAAGTAGCACGC................................................................ 22 1 1 126.00 126 15 64 10 17 13 7
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA............................................................. 25 2 1 125.00 125 64 55 0 4 2 0
.....................................................................................................TCAGGTGCCTGAAGTAGCGCGCG............................................................... 23 1 1 123.00 123 91 13 10 5 1 3
.....................................................................................................TCAGGTACCTAAAGTAGCGCG................................................................. 21 1 1 120.00 120 4 53 56 2 4 1
.....................................................................................................TAAGGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 119.00 119 67 1 24 21 1 5
.....................................................................................................ACAGGTACCTGAAGTAGCGCG................................................................. 21 1 1 116.00 116 22 77 10 1 5 1
....................................................................................................TTCAGGTACCTGAAGTAGCGCGC................................................................ 23 1 1 116.00 116 111 5 0 0 0 0
.....................................................................................................TTAGGTACCTGAAGTAGCGC.................................................................. 20 1 1 114.00 114 0 106 6 2 0 0
.....................................................................................................TCAGGTACCTGAACTAGCGCGCG............................................................... 23 1 1 113.00 113 81 1 15 2 3 11
.....................................................................................................TCAGGTACCTGAAGTAGCGAGC................................................................ 22 1 1 111.00 111 13 17 32 42 3 4
......................................................................................................TCAGTACCTGAAGTAGCGCGC................................................................ 21 3 1 110.00 110 41 60 5 3 0 1
.....................................................................................................TCAGGTACGTGAAGTAGCGCGGG............................................................... 23 2 1 109.00 109 109 0 0 0 0 0
........................................................................................................GGTACCTGAAGTAGCGCGCG............................................................... 20 0 1 109.00 109 94 2 1 12 0 0
.....................................................................................................TCAGGAACCTGAAGTAGCGCGC................................................................ 22 1 1 109.00 109 15 75 1 0 2 16
......................................................................................................CAGGTACCCGAAGTAGCGCGCG............................................................... 22 1 1 109.00 109 109 0 0 0 0 0
.....................................................................................................TCAGGTACCTGGAGTAGCGCG................................................................. 21 1 1 107.00 107 11 8 63 3 17 5
.....................................................................................................TCAGGTACCTGACGTAGCGCGCG............................................................... 23 1 1 107.00 107 2 63 27 1 6 8
.....................................................................................................TCAGGTACCTGAAGTAGCGCCCG............................................................... 23 1 1 107.00 107 47 2 28 19 2 9
.....................................................................................................TAAGGTACCTGAAGTAGCGCGC................................................................ 22 1 1 105.00 105 21 15 33 31 0 5
.....................................................................................................TAAGGTACCTGAAGTAGCGCG................................................................. 21 1 1 103.00 103 2 6 83 7 1 4
.....................................................................................................TCAGGTACATGAAGTAGCGCGT................................................................ 22 2 1 101.00 101 98 2 1 0 0 0
.....................................................................................................TCAGGTACCTGGAGTAGCGCGCG............................................................... 23 1 1 100.00 100 62 6 15 9 1 7
.......................................................................................................AGGTACCTGAAGTAGCGCGCGT.............................................................. 22 0 1 100.00 100 84 4 1 10 1 0
.....................................................................................................TCAGGTACCTGAAGTAACGCGC................................................................ 22 1 1 100.00 100 20 47 8 8 10 7
.....................................................................................................TCAGGTACGTGAAGTAGCGCGCT............................................................... 23 2 1 100.00 100 100 0 0 0 0 0
.....................................................................................................TCATGTACCTGAAGTAGCGC.................................................................. 20 1 1 100.00 100 0 85 5 4 6 0
.....................................................................................................TCAGCTACCTGAAGTAGCGCGCG............................................................... 23 1 1 98.00 98 80 4 5 7 0 2
......................................................................................................CAGGTACCAGAAGTAGCGCGC................................................................ 21 1 1 98.00 98 98 0 0 0 0 0
.....................................................................................................TCAGGTACCTGAAGTGGCGC.................................................................. 20 1 1 97.00 97 15 7 63 10 0 2
.....................................................................................................TCAGGTACCTGAAGTAGCGTGCG............................................................... 23 1 1 95.00 95 47 23 9 10 0 6
.....................................................................................................TCAGGTACCTGAATTAGCGCG................................................................. 21 1 1 95.00 95 13 24 32 1 24 1
.....................................................................................................TCAGGTACCTTAAGTAGCGCG................................................................. 21 1 1 94.00 94 5 8 33 8 39 1
.....................................................................................................TCAGGTACCTGCAGTAGCGCGC................................................................ 22 1 1 94.00 94 3 27 30 2 21 11
.....................................................................................................TCAGGTACGTGAGGTAGCGCGCG............................................................... 23 2 1 94.00 94 94 0 0 0 0 0
.....................................................................................................TGAGGTACCTGAAGTAGCGCGCGA.............................................................. 24 2 1 92.00 92 0 92 0 0 0 0
.....................................................................................................TCAGGTACCTGACGTAGCGC.................................................................. 20 1 1 92.00 92 1 75 12 0 4 0
.....................................................................................................TCAGCTACCTGAAGTAGCGCGC................................................................ 22 1 1 92.00 92 41 32 7 7 1 4
.....................................................................................................TCAGGTAACTGAAGTAGCGCGA................................................................ 22 2 1 91.00 91 1 88 1 0 1 0
....................................................................................................ATCAGGTACCTGAAGTAGCGCGCG............................................................... 24 1 1 91.00 91 89 2 0 0 0 0
.....................................................................................................TGAGGTACCTGAAGTAGCGCGT................................................................ 22 2 1 91.00 91 0 90 1 0 0 0
.....................................................................................................TCAGGTACCTGAAGTAGAGCGCG............................................................... 23 1 1 88.00 88 42 4 18 20 1 3
.....................................................................................................TCCGGTACCTGAAGTAGCGCG................................................................. 21 1 1 88.00 88 0 81 5 1 1 0
.....................................................................................................TCAGGTACCTGAAGTAGCACGCG............................................................... 23 1 1 88.00 88 48 11 8 15 2 4
.....................................................................................................TCAGGTACCTGAAGTTGCGCG................................................................. 21 1 1 87.00 87 2 54 29 0 2 0
.....................................................................................................TCAGGTACGTGAAGTAGCGCGCGA.............................................................. 24 2 1 86.00 86 86 0 0 0 0 0
.....................................................................................................TCAGGTACCTGTAGTAGCGCG................................................................. 21 1 1 85.00 85 2 0 71 0 11 1
.....................................................................................................TCAGGTACCTGAAGTATCGC.................................................................. 20 1 1 83.00 83 2 12 46 9 14 0
.....................................................................................................TCAGGTACCTGAAGAAGCGCG................................................................. 21 1 1 82.00 82 12 58 3 1 2 6
.....................................................................................................TCAGGTACCTGAAGTCGCGCG................................................................. 21 1 1 81.00 81 5 0 54 1 20 1
.....................................................................................................TCAGATACCTGAAGTAGCGCGCG............................................................... 23 1 1 79.00 79 59 7 6 3 0 4
.....................................................................................................TCCGGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 79.00 79 9 67 2 1 0 0
.....................................................................................................TCAGGTACCTGAAGTACCGCGCG............................................................... 23 1 1 79.00 79 60 1 2 8 3 5
.....................................................................................................TCAGGTACATGAAGTAGCGC.................................................................. 20 1 1 79.00 79 53 17 6 1 0 2
.....................................................................................................TCAGGTACCTGAAGTAGCGTG................................................................. 21 1 1 78.00 78 5 53 10 1 8 1
.....................................................................................................TCAGGTACCTGAAGTAGTGCGCG............................................................... 23 1 1 78.00 78 42 15 11 7 0 3
.....................................................................................................TCAGGTATCTGAAGTAGCGCGC................................................................ 22 1 1 77.00 77 15 44 7 8 1 2
.....................................................................................................TCAGGTACCTAAAGTAGCGCGCG............................................................... 23 1 1 77.00 77 28 20 19 5 1 4
.....................................................................................................TCAGGTACCTGAAGTAGCGCGAA............................................................... 23 2 1 77.00 77 15 46 9 1 6 0
.....................................................................................................TCAGGTACCTGAGGTAGCGCG................................................................. 21 1 1 76.00 76 15 11 33 0 15 2
.....................................................................................................TCAGGTACCTGAAGTAGAGCG................................................................. 21 1 1 74.00 74 2 4 51 5 10 2
......................................................................................................CAGGTACCGGAAGTAGCGCG................................................................. 20 1 1 73.00 73 73 0 0 0 0 0
.....................................................................................................TCAGGTACCCGAAGTAGCGCG................................................................. 21 1 1 73.00 73 13 34 16 3 6 1
.....................................................................................................TCAGGTAACTGAAGTAGCGCGCG............................................................... 23 1 1 72.00 72 10 49 4 3 1 5
.....................................................................................................TCAGGTACCTCAAGTAGCGCGC................................................................ 22 1 1 72.00 72 8 34 15 2 11 2
.....................................................................................................TCAGGTACCTGAAGTAGCCCGC................................................................ 22 1 1 72.00 72 19 15 6 3 22 7
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCTTT............................................................. 25 2 1 72.00 72 49 1 15 7 0 0
.....................................................................................................TCAGGTACCTTAAGTAGCGCGC................................................................ 22 1 1 71.00 71 12 5 15 24 12 3
....................................................................................................ATCAGGTACCTGAAGTAGCGCGC................................................................ 23 1 1 70.00 70 66 4 0 0 0 0
.....................................................................................................TGAGGTACCTGAAGTAGCGCGCGT.............................................................. 24 1 1 69.00 69 1 68 0 0 0 0
.....................................................................................................TCAGGTACCTGAAGTAGAGCGC................................................................ 22 1 1 69.00 69 9 20 16 13 7 4
......................................................................................................CAGGTACCCGAAGTAGCGCGC................................................................ 21 1 1 69.00 69 69 0 0 0 0 0
.....................................................................................................TCAGGTACCTGAAGTAGTGCG................................................................. 21 1 1 68.00 68 5 29 19 4 9 2
......................................................................................................CAGGTACCTGAAGTAGCGCGCGTT............................................................. 24 1 1 68.00 68 65 0 0 3 0 0
.....................................................................................................TCAGGTACCTGAACTAGCGCGC................................................................ 22 1 1 68.00 68 29 15 15 4 3 2
.........................................................................................................GTACCTGAAGTAGCGCGCG............................................................... 19 0 1 67.00 67 59 0 6 1 0 1
.....................................................................................................TCAGATACCTGAAGTAGCGCGC................................................................ 22 1 1 66.00 66 18 37 5 3 1 2
.....................................................................................................TCAGGTACCTGAAGTAACGCGCG............................................................... 23 1 1 66.00 66 40 9 4 4 3 6
.....................................................................................................TCAGGTACCTGAACTAGCGCG................................................................. 21 1 1 66.00 66 6 6 29 1 23 1
.....................................................................................................TCAGGTACCTGAAGTAGCGCGTA............................................................... 23 2 1 65.00 65 18 3 30 11 2 1
.....................................................................................................TCAGGTACCTGAAGTCGCGCGCG............................................................... 23 1 1 65.00 65 29 3 23 5 3 2
.....................................................................................................TCAGGTACCTCAAGTAGCGCG................................................................. 21 1 1 64.00 64 2 10 25 1 21 5
........................................................................................................GGTACCTGAAGTAGCGCGC................................................................ 19 0 1 63.00 63 43 14 3 2 1 0
.....................................................................................................TCAGGTACCTGAAGTGGCGCGCGT.............................................................. 24 1 1 63.00 63 55 0 1 6 0 1
................................................................CGCGCTAATCAGTGACCGG........................................................................................................ 19 0 1 63.00 63 58 0 2 3 0 0
.....................................................................................................TCAGGTACCTGAAGTAGCCCG................................................................. 21 1 1 63.00 63 8 10 7 0 32 6
.....................................................................................................TCAGGTGCCTGAAGTAGCGCG................................................................. 21 1 1 63.00 63 9 30 14 0 7 3
.....................................................................................................TCAGGTACCTGAAGTAGCAC.................................................................. 20 1 1 63.00 63 0 56 3 1 2 1
.....................................................................................................TCAGGTAACTGAAGTAGCGC.................................................................. 20 1 1 62.00 62 1 57 2 1 1 0
.................................................................GCGCTAATCAGTGACCGGGGCT.................................................................................................... 22 0 1 62.00 62 53 0 7 2 0 0
....................................................................................................GTCAGGTACCTGAAGTAGCGCGC................................................................ 23 0 1 61.00 61 61 0 0 0 0 0
.....................................................................................................TCAGGTACCTTAAGTAGCGCGCG............................................................... 23 1 1 61.00 61 16 2 13 20 8 2
.....................................................................................................TCAAGTACCTGAAGTAGCGCGC................................................................ 22 1 1 61.00 61 12 30 14 2 1 2
.....................................................................................................TCAGGTACCTGAAGTAGCACG................................................................. 21 1 1 61.00 61 6 12 26 2 12 3
......................................................................................................CAGGTACCTGAAGTAGCGCGCA............................................................... 22 1 1 61.00 61 55 5 0 0 0 1
.....................................................................................................TCAGGTACCTGAAATAGCGCGCG............................................................... 23 1 1 60.00 60 42 2 10 4 1 1
.....................................................................................................TCACGTACCTGAAGTAGCGCGC................................................................ 22 1 1 60.00 60 21 18 10 4 3 4
.....................................................................................................TCAGGTACCTGAAGGAGCGCG................................................................. 21 1 1 60.00 60 15 5 4 0 33 3
....................................................................................................CGCAGGTACCTGAAGTAGCGCGC................................................................ 23 2 1 59.00 59 0 59 0 0 0 0
.....................................................................................................TGAGGTACCTGAAGTAGCGCAC................................................................ 22 2 1 58.00 58 0 58 0 0 0 0
.....................................................................................................GCAGGTACCTGAAGTAGCGC.................................................................. 20 1 1 57.00 57 12 41 2 0 1 1
.....................................................................................................TCAGGTACCTGAAGTAGCGGGCG............................................................... 23 1 1 56.00 56 46 2 4 2 1 1
.....................................................................................................TCGGGTACCTGAAGTAGCGCG................................................................. 21 1 1 56.00 56 8 29 7 6 5 1
.....................................................................................................TCAGGTACCTGAAATAGCGCGC................................................................ 22 1 1 56.00 56 17 25 11 0 3 0
.....................................................................................................TCAGGTACGTGAAGTAGCGCGG................................................................ 22 2 1 56.00 56 56 0 0 0 0 0
.....................................................................................................TCAGGTACATGAAGTAGCGCGTG............................................................... 23 2 1 55.00 55 55 0 0 0 0 0
.....................................................................................................TCAGGTACCTGAAGTAGCTC.................................................................. 20 1 1 55.00 55 2 21 16 2 13 1
.....................................................................................................TCAGGAACCTGAAGTAGCGCG................................................................. 21 1 1 54.00 54 2 22 13 0 10 7
.....................................................................................................TCAGGTACCTGCAGTAGCGCGCG............................................................... 23 1 1 53.00 53 2 1 31 8 2 9
.....................................................................................................CCAGGTACCTGAAGTAGCGC.................................................................. 20 1 1 53.00 53 5 40 4 2 2 0
.....................................................................................................TCAGGTACGTGAAGTAGCGCGCGTT............................................................. 25 2 1 53.00 53 53 0 0 0 0 0
.....................................................................................................TCAGGTACCTGAAGTAGCGCCG................................................................ 22 2 1 53.00 53 50 1 0 2 0 0
......................................................................................................CAGGTACCTGAAGTAGCGCGA................................................................ 21 1 1 52.00 52 42 9 1 0 0 0
.....................................................................................................TCAGGTACGTGAAGTAGCGCGAG............................................................... 23 2 1 52.00 52 52 0 0 0 0 0
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTA............................................................ 26 2 1 52.00 52 38 2 1 11 0 0
.....................................................................................................TCAGGTACCTGAAGTGGCGCGCGA.............................................................. 24 2 1 52.00 52 40 0 7 5 0 0
.........................................................................................................GTACCTGAAGTAGCGCGC................................................................ 18 0 1 51.00 51 33 12 4 2 0 0
.....................................................................................................TCAGGTACCTGAAGTTGCGCGCG............................................................... 23 1 1 51.00 51 16 15 15 1 3 1
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCGAT............................................................. 25 2 1 50.00 50 37 8 3 2 0 0
.....................................................................................................TCAGGTACGTGAAGTAGCGCGA................................................................ 22 2 1 50.00 50 50 0 0 0 0 0
.....................................................................................................TCACGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 49.00 49 33 0 10 2 0 4
.....................................................................................................TCAGGTACCTCAAGTAGCGCGCG............................................................... 23 1 1 49.00 49 25 5 14 4 1 0
.....................................................................................................TGAGGTACCTGAAGTAGCGCGCA............................................................... 23 2 1 49.00 49 1 48 0 0 0 0
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAA............................................................ 26 2 1 48.00 48 29 16 0 1 2 0
.....................................................................................................TCAGGTACCTGAAGTAGCGA.................................................................. 20 1 1 48.00 48 8 16 16 6 2 0
.....................................................................................................TCAGGTACCTGAAGTAGCGCGAAA.............................................................. 24 3 1 48.00 48 8 33 2 0 5 0
.....................................................................................................TCAGGTACCAGAAGTAGCGCGC................................................................ 22 1 1 48.00 48 19 25 0 2 1 1
.....................................................................................................TCAGATACCTGAAGTAGCGCG................................................................. 21 1 1 47.00 47 6 13 16 1 9 2
......................................................................................................CAGGTACCTGAAGTAGCGCGCGC.............................................................. 23 1 1 47.00 47 45 2 0 0 0 0
.....................................................................................................TCAGGTATCTGAAGTAGCGCGCG............................................................... 23 1 1 47.00 47 31 2 3 9 0 2
.....................................................................................................GCAGGTACCTGAAGTAGCGCGCGT.............................................................. 24 1 1 46.00 46 44 2 0 0 0 0
.....................................................................................................TCAGGTACCGGAAGTAGCGCGC................................................................ 22 1 1 45.00 45 6 35 0 0 0 4
....................................................................................................CTCAGGTACCTGAAGTAGCGC.................................................................. 21 1 1 45.00 45 6 38 0 0 1 0
.....................................................................................................TCAGGTACCTGAAGTAGCGCGCGAC............................................................. 25 2 1 45.00 45 40 4 0 1 0 0
.....................................................................................................TCAGGTACCTGAAGTACCGCG................................................................. 21 1 1 45.00 45 5 7 10 2 19 2
.....................................................................................................TCAGGTACCTGAAGTAGCGCAA................................................................ 22 2 1 44.00 44 6 31 4 1 2 0
......................................................................................................CAGGTACCTGAAGTGGCGCGCG............................................................... 22 1 1 44.00 44 44 0 0 0 0 0
......................................................................................................CAGGTACCTGAAGTAGCG................................................................... 18 0 1 44.00 44 40 4 0 0 0 0
.....................................................................................................TCAGGTACCTGAAGTAGCGCGGGT.............................................................. 24 1 1 44.00 44 44 0 0 0 0 0
.....................................................................................................TCAAGTACCTGAAGTAGCGCGCG............................................................... 23 1 1 43.00 43 28 3 6 4 0 2
.....................................................................................................TCAGGTACCTGAAATAGCGCG................................................................. 21 1 1 43.00 43 5 8 24 2 4 0
.....................................................................................................TCAGGAACCTGAAGTAGCGCGCG............................................................... 23 1 1 43.00 43 21 6 1 3 1 11
.....................................................................................................TCAGGTACCTGATGTAGCGCG................................................................. 21 1 1 43.00 43 2 0 34 0 3 4
.....................................................................................................TCAGGTACCTGAAGTAGCCCGCG............................................................... 23 1 1 42.00 42 23 5 5 3 0 6
.....................................................................................................TCAGGTACCTGTAGTAGCGCGC................................................................ 22 1 1 41.00 41 1 3 25 0 6 6
.....................................................................................................TCAGGTACTTGAAGTAGCGCGT................................................................ 22 2 1 41.00 41 39 0 1 0 0 1
.....................................................................................................TCAGGTACCTGAAGTAACGCG................................................................. 21 1 1 41.00 41 1 15 7 2 14 2
.....................................................................................................TGAGGGACCTGAAGTAGCGCGC................................................................ 22 2 1 41.00 41 0 39 0 0 1 1
.....................................................................................................TCAGGTACATGAAGTAGCGCGCGA.............................................................. 24 2 1 40.00 40 38 2 0 0 0 0
......................................................................................................GAGGTACCTGAAGTAGCGCGCG............................................................... 22 1 1 40.00 40 40 0 0 0 0 0
.....................................................................................................TCAGGTACCTGATGTAGCGCGC................................................................ 22 1 1 39.00 39 3 2 25 0 4 5
.....................................................................................................TCAGGTAAATGAAGTAGCGCGC................................................................ 22 2 1 39.00 39 0 38 0 0 1 0
.....................................................................................................TCAGGTACTTGAAGTAGCGCGTG............................................................... 23 2 1 39.00 39 39 0 0 0 0 0
................................................................CGCGCTAAGCAGTGACCGGGGCT.................................................................................................... 23 1 1 38.00 38 38 0 0 0 0 0
.......................................................................................................AGGTACCTGAAGTAGCGC.................................................................. 18 0 1 38.00 38 9 16 2 2 6 3
.....................................................................................................TCAGGTACCTGACGAAGCGCGC................................................................ 22 2 1 37.00 37 0 37 0 0 0 0
.....................................................................................................TCAGGTACATGAAGTAGCGCGGG............................................................... 23 2 1 37.00 37 37 0 0 0 0 0

Anti-sense strand reads

AAGAAAAAAAAATATATAGATGTAGAAGTTGAAGTTCAGGTCGTGAGAGGTCAGAGGATGGAACGCGCGATTAGTCACTGGCCCCGACCAAAAACGTTGTCAGTCCATGGACTTCATCGCGCGCACCACCGTCTGTATATAGGCGGTATGTTTTCATATATTACGTTTAGGAAGTCTTTTAGGGTGA

*************************************************..((((.(((((.(((((((((.((((..(((..(((((..........))))).)))..))))..))))))))).))))).))))...************************************************* 		Read size # Mismatch Hit Count Total Norm Total V039

embryo

 M044

female body

 V055

head

 V106

head
..................................................................................CGCCACCAAAAACGTTGCCAGT................................................................................... 22 3 1 1.00 1 1 0 0 0
...............................................................CGCGCGATTAGTCCATGGAC........................................................................................................ 20 3 3 0.33 1 0 1 0 0
................................................................................................CTGTCAGTCCATGGCGTTCA....................................................................... 20 3 3 0.33 1 0 0 1 0
.................AGCTGTAAAAGTTGAAGTTCG..................................................................................................................................................... 21 3 9 0.11 1 0 0 0 1
........................................................................................................................................ATGTAGGGGGTAGGTTTTCA............................... 20 3 11 0.09 1 1 0 0 0
..........................................GGGAGGGTTCAGAGGATGGA............................................................................................................................. 20 3 12 0.08 1 0 1 0 0
..........................................................................TGGCTGGGCCCGACCAAAA.............................................................................................. 19 3 17 0.06 1 0 0 1 0
............................................................................................................GGCAGTCATCGCGCGCAC............................................................. 18 3 18 0.06 1 0 1 0 0
.....AAAAAAAAATGTAGATGGAGA................................................................................................................................................................. 21 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_12916:15333945-15334131 + dan-mir-275 Known_mirbase TT---CTTTT-TTTTTATA------TATCTACATCTTCAACTTCAA------GTC--CAGCAC---------------------------------TC--------------------TC-CAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTT-----GCA-ACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATAT--CC--------------GC----------------------------------CATACA---AAAGTAT----ATAATG-----------------------CAAAT-CCTTCAG-----------A-----AAATCCCACT
droBip1 scf7180000396572:1689356-1689551 - T-----------------A------TATCTACATCTTCAACTTCAACTCCAGCTA--TA-CTCCAACTCC---------------------CATGT---------ACTC---------CA-AAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTT-----GCA-ACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATAT--CCGCC-----ATATCCGA----------------------------------CATACATGCAAAGTAT----ATAATG-----------------------CAAAT-CCTTCAC-----------A------------A--
droKik1 scf7180000302384:54772-55002 - AT----------------A------CATCTACATCTTAAACTTGGC------CTC--CAACTCCAGCTTGG---CTTATGCGGGACGGGATG-TGTTCCTTCCCAGCTG---------AAAAAGTCTCTTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTT-----ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATAT--CAT-C--------GCCAA----------------------------------C---------------------AACTCATACCTCGTGAATCGCGAATTTCGAAT-CCTCGAA-----------AA----GAATCCCAC-
droFic1 scf7180000454115:155599-155829 + TA---CATCTTATATTAAATATCTACATCTACATCTTCAACTCCAG------CTT--CAGCTCCTACTCGG---TATAC----------ATGATGTTCC--CC-AGCTGGAA------AA-AAGTCTACTGCCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTT-----ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACAT--CTC-C-----ATATCCAG----------------------------------CA-----------CGTTTA------------------GCTCGCC---GTCGAGT-CCTCGAA-----------AC----AAATCCCA--
droEle1 scf7180000491028:1624810-1624989 - A--------------------------TCTACATCTTCAACTCCAG------CTC--CAGT--------------ACAT----------ATGATGTTCC--C-CAACTG---------AA-AAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTC-----ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATAT--CTT-C-----ATTTTC-------------------------------------------------------------------------------A---GTCGAGT-CCTCGAA-----------AC----AAATCCCATG
droRho1 scf7180000766421:7625-7806 - AT------------------------ATCTACATCTTCAACTCCAG------CTC--CAG--------------TATAT----------ATGATGTTCC--C-CAGCTG---------AA-AAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTTT-C--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATAT--CTT-C-----ATTTCC-------------------------------------------------------------------------------A---GTCGAGT-CCTCGAA-----------AC----AGATCCCA--
droBia1 scf7180000302422:9125460-9125677 + AT------------------------ATCTACATCTGCAACTCCAGCCACAGCTCGACAGCCCCAACTCGG---CATAT---------GATGATGTTCC--CCCGGCTT---------AAAGAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTT-----GTATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACAGACAT--CTC-C-----ACATCCAC----------------------------------C-----------GCCTTTA------------------ACTCGCT---GGCGAGT-CCTCGAA-----------AC----AAATCCCG--
droTak1 scf7180000415604:142374-142590 - AT------------------------ATCTACATCTTCAACTCCAG------CTA--CAGCTCCTACTCGG---TATAT--AT-----GACGATGTTCC--CCCGGCTG---------AA-AAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTT-----ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACAT--CTC-CAACCCATCTCCA--------------------------------------------AACGCATTTA------------------ACTCGCT---GGCGAGT-CCTCGAA-----------AC----AAATCCCA--
droEug1 scf7180000409463:614634-614859 + AT------------------------ATCTACATCTCCAACTCCAG------CTA--CAGCTCCTACTCGGCAGTATAT--GTAT---AATGATGTTCT--CCC---TGAAAAGGCTTAA-ATGTCTTCTACCTTGCGCGCTAATCAGAGACCGGGGCTGG-----TTTTT-----ACATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACAT--CTC-C-----ATAT------------------------------GTCTTCATC-----------GCATTTA------------------ACTCGCT---GGCGAGT-CCTCGAA-----------AC----AAATCCCA--
dm3 chr2L:7425722-7425953 + dme-mir-275 Known_mirbase CTGGCCTG-----------------GCTCTTCATCTTCAACTCCAGCCA---CCA--CAGTTCCTACTCGT---TATAT--GT-----GATGATGTTCC--CCCGACTG---------TA-AAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTTT----ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATAT--CTC-C-----ATCTTCAC----------------------------------CATAT-------------AAATAAGCGAAA--T----GCTCGCA---GGCGAGT-CCTCGCC-----------AG----AAATCCCA--
droSim2 2l:7179693-7179927 + dsi-mir-275 Known_mirbase CTGGCCTGGC---TT--TA------TATCTACATCTTCAACTCCAG------CCG--CAGCTCCTACTCGT---TATAT--GT-----GATGATGTTCC--CCCGGCTG---------AA-AAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTTT----ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATAT--CTC-C-----ATCTCCGC----------------------------------CATAT-------------AAATAAGCCAAA--T----GCTCGCA---GGCGAGT-CCTCGCC-----------AG----AAATCCCA--
droSec2 scaffold_3:2941179-2941414 + dse-mir-275 Known_mirbase CTGGTCTGGC---TT--TA------TATCTACATCTTCAACTCCAG------CCG--CAGCTCCTACTCGT---TATAT--GT-----GATGATGTTCC--CCCGACTG---------AA-AAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTTG-----TTTTTT----ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATAT--CTC-C-----ATCTCCGT----------------------------------CATAT-------------AAATAAGCCAAA--T----GCTCGCA---GGCGAGTTCCTCGCC-----------AG----AAATCCCA--
droYak3 2L:5473722-5473948 - dya-mir-275 Known_mirbase TT---------------TA------TATCTACATCTTCAACTCCAG------CCA--CAGCTCCTACTCGT---TATAT--GC-----GATGATGTTCC--CCCGACTG-AA------CA-GAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTTT----ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATAT--CTC-C-----AACTCCAC--------------------------GA------TATAT-------------AAATAAGCCAAA--A----GCTCGCA---GGCGAGT-CCTCCAA-----------AG----AAACCC----
droEre2 scaffold_4929:16344449-16344665 + der-mir-275 Known_mirbase TT---------------TA------TGTCTACATCTTCAACTGCAGCCCCAGCCG--CAGCTCCTACTCGT---TGTAT--GT-----GATGATGTTCC--CCCGACTG---------AA-AAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTTT----ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATAT--CTC-C-----ATCTCCAC----------------------------------CATAT-------------AAATAAGACAAA--T----GCTCGCA---GGCGAGT-CCT-------------------------------
dp5 4_group1:4175704-4175864 + dps-mir-275 Known_mirbase AT------------------------ATCTCGTCCCACAACCCCAA------C--------------------------------------------CC--ACCTTCTT---------GA-AAGTCTCCTACCATGCGCGCTAATCAGAGACCGGGGCTGG-----TTTTTT----CACTGCAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CTAGACACGAA--CAT------------------------------------CTGTGTGGCATCATC-----------GTTT---------------CTA--------------------------------GGGAAT-AC--------------
droPer2 scaffold_5:1086425-1086585 - dpe-mir-275 Known_mirbase AT------------------------ATCTCGTCCCACAACCCCAA------C--------------------------------------------CC--ACCTTCTT---------GA-AAGTCTCCTACCATGCGCGCTAATCAGAGACCGGGGCTGG-----TTTTTT----CACTGCAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CTAGACACGAA--CAT------------------------------------CTGTGTGGCATCATC-----------GTTT---------------CTA--------------------------------GGGAAT-AC--------------
droWil2 scf2_1100000004585:5257515-5257692 - dwi-mir-275 Known_mirbase ---------------------------------------------------------------------------------------------------------------------------GTCTCTTACCTTGCGCGCTAATCAGTGACCAGGGCTGAGTAATTTTATT----CAATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTT-TTAGACCAAGATTCAT--C------------GCACGACGACGGCGACAACGACGA---CACAACA--------------AAA---------------AAA----------------CCATTTTAATCCATTTGGGATTTACCCCAAAGTTTTATT
droVir3 scaffold_12963:15419935-15420088 - dvi-mir-275 Known_mirbase GT---CTG------------------CTCTC-------TCCCCTAA--------------------CT------------------------------------CGCTG---------CG-CCGTCTTTTACCGTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTGGTTAT-CCCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCCAGACGTATT--CAT------------------------------------CT---------------------TAAGCTT----ACCATG----CC---------------------T-CCCTCAG-----------AT--------------
droMoj3 scaffold_6500:18399353-18399509 - dmo-mir-275 Known_mirbase GG------------------------T-------------------------CCG--CTGCGCC---------------------------------------C--------------GT-CCGTCTTTTACCGTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTCGATTAT-CTCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCTAGACGCATT--CAA------------------------------------CGCTCTGCTAGCA--------------ATT---------------CTA----------------GCATTCTACGCC-----------AG----ATGGCAAT--
droGri2 scaffold_15126:5008382-5008526 + dgr-mir-275 Known_mirbase GC---CT-------------------CTCTCTTTCTT---------------------------------------------------------------------------------CG-TCGTCGTTTACCGCGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTGATTAT-CCCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCCAGACGCATT--CAA----------------------------------------------------------------------------------------CAAA-C---GGCGCCT-GCTCAGC-----------AA----ACATCG-G--

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TT---CTTTT-TTTTTATA------TATCTACATCTTCAACTTCAA------GTC--CAGCAC---------------------------------TC--------------------TC-CAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTT-----GCA-ACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATAT--CC--------------GC----------------------------------CATACA---AAAGTAT----ATAATG-----------------------CAAAT-CCTTCAG-----------A-----AAATCCCACTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................221250221.002502211029281250552854254593967443
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................231248276.0024827621614914826455235369527541
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................................................................................................................21192111.0092111259493729562601164191992244
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGC....................................................................................................................................................................20122089.00220893243132047053293956652
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................24120328.00203281742197110533401533
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................22112472.0012472122661081102166
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................2116927.00692763714676123140
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................2216778.00677832781485741541525262
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................................................................................................................2214804.004804103029762791343769
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................2414626.0046262909140225655229
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................2313165.0031652434443143915679
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCG.....................................................................................................................................................................1912280.002280797446245493227
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCT.................................................................................................................................................................................................................2311808.001808106049251268378
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCG...................................................................................................................................................................2011684.001684150914843146
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................................................................................................................2511565.0015651335161449160
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................................................................................................................2311525.00152565470936147141
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGC................................................................................................................................................................2411137.00113781426604845
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................231972.00972936801027
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................211886.0088679724317936
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................................................................................................................201556.0055635213317191718
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTT.................................................................................................................................................................231553.005533251602416721
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................................................................................................................211488.0048832341333745
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................................................................................................................231461.0046111530397189
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCA...................................................................................................................................................................211417.00417299930423619
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCT...................................................................................................................................................................211366.00366337829320518
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGG..................................................................................................................................................................221328.00328274367155
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT..............................................................................................................................................................261321.00321263500845
........................................................................................................................................CGCGCTAATCAGTGACCGGGG...................................................................................................................................................................................................................211320.003202359572143
........................................................................................................................................CGCGCTAATCAGTGACCGGGGC..................................................................................................................................................................................................................221319.0031919228421182
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGC....................................................................................................................................................................191258.00258199510062
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCAA................................................................................................................................................................241251.002511151265014
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................231222.00222203150004
........................................................................................................................................................................................TCAGGTACCTGAAGTAGC......................................................................................................................................................................181215.002159083015126
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................221201.0020119420014
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCTT................................................................................................................................................................................................................241193.00193156603217
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCG...................................................................................................................................................................191191.0019172434212193
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGG................................................................................................................................................................241180.00180162110034
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................211170.0017016250111
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA...............................................................................................................................................................251158.00158113900729
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................241151.0015115100000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA..............................................................................................................................................................261146.0014660860000
........................................................................................................................................CGCGCTAATCAGTGACCGGG....................................................................................................................................................................................................................201136.00136105404518
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGT....................................................................................................................................................................201127.00127137413342
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCTA................................................................................................................................................................241126.0012676315077
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA...............................................................................................................................................................251125.0012564552004
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGCG.................................................................................................................................................................201109.0010994200112
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................221100.0010084410110
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAA.................................................................................................................................................................23177.007715466091
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGTT...............................................................................................................................................................24168.00686500003
............................................................................................................................................................................................GTACCTGAAGTAGCGCGCG.................................................................................................................................................................19167.00675900161
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTA.................................................................................................................................................................23165.0065183213011
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGC..................................................................................................................................................................19163.006343141032
........................................................................................................................................CGCGCTAATCAGTGACCGG.....................................................................................................................................................................................................................19163.00635800023
.........................................................................................................................................GCGCTAATCAGTGACCGGGGCT.................................................................................................................................................................................................................22162.00625300072
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................23161.00616100000
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCA.................................................................................................................................................................22161.00615550100
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCCG..................................................................................................................................................................22153.00535010002
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGA..................................................................................................................................................................21152.00524290010
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTA..............................................................................................................................................................26152.005238200111
............................................................................................................................................................................................GTACCTGAAGTAGCGCGC..................................................................................................................................................................18151.005133120042
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAT...............................................................................................................................................................25150.00503780032
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAA..............................................................................................................................................................26148.004829162001
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGA....................................................................................................................................................................20148.004881620166
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAAA................................................................................................................................................................24148.00488335020
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGC................................................................................................................................................................23147.00474520000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAC...............................................................................................................................................................25145.00454040001
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCAA..................................................................................................................................................................22144.00446312041
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCG.....................................................................................................................................................................18144.00444040000
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGC....................................................................................................................................................................18138.00389166322
droBip1
T-----------------A------TATCTACATCTTCAACTTCAACTCCAGCTA--TA-CTCCAACTCC---------------------CATGT---------ACTC---------CA-AAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTT-----GCA-ACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATAT--CCGCC-----ATATCCGA----------------------------------CATACATGCAAAGTAT----ATAATG-----------------------CAAAT-CCTTCAC-----------A------------A--SizeHit CountTotal NormTotal
No Reads
droKik1
AT----------------A------CATCTACATCTTAAACTTGGC------CTC--CAACTCCAGCTTGG---CTTATGCGGGACGGGATG-TGTTCCTTCCCAGCTG---------AAAAAGTCTCTTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTT-----ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATAT--CAT-C--------GCCAA----------------------------------C---------------------AACTCATACCTCGTGAATCGCGAATTTCGAAT-CCTCGAA-----------AA----GAATCCCAC-SizeHit CountTotal NormTotal
No Reads
droFic1
TA---CATCTTATATTAAATATCTACATCTACATCTTCAACTCCAG------CTT--CAGCTCCTACTCGG---TATAC----------ATGATGTTCC--CC-AGCTGGAA------AA-AAGTCTACTGCCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTT-----ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACAT--CTC-C-----ATATCCAG----------------------------------CA-----------CGTTTA------------------GCTCGCC---GTCGAGT-CCTCGAA-----------AC----AAATCCCA--SizeHit CountTotal NormTotal
No Reads
droEle1
A--------------------------TCTACATCTTCAACTCCAG------CTC--CAGT--------------ACAT----------ATGATGTTCC--C-CAACTG---------AA-AAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTC-----ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATAT--CTT-C-----ATTTTC-------------------------------------------------------------------------------A---GTCGAGT-CCTCGAA-----------AC----AAATCCCATGSizeHit CountTotal NormTotal
No Reads
droRho1
AT------------------------ATCTACATCTTCAACTCCAG------CTC--CAG--------------TATAT----------ATGATGTTCC--C-CAGCTG---------AA-AAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTTT-C--ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATAT--CTT-C-----ATTTCC-------------------------------------------------------------------------------A---GTCGAGT-CCTCGAA-----------AC----AGATCCCA--SizeHit CountTotal NormTotal
No Reads
droBia1
AT------------------------ATCTACATCTGCAACTCCAGCCACAGCTCGACAGCCCCAACTCGG---CATAT---------GATGATGTTCC--CCCGGCTT---------AAAGAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTT-----GTATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACAGACAT--CTC-C-----ACATCCAC----------------------------------C-----------GCCTTTA------------------ACTCGCT---GGCGAGT-CCTCGAA-----------AC----AAATCCCG--SizeHit CountTotal NormTotal
No Reads
droTak1
AT------------------------ATCTACATCTTCAACTCCAG------CTA--CAGCTCCTACTCGG---TATAT--AT-----GACGATGTTCC--CCCGGCTG---------AA-AAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTT-----ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACAT--CTC-CAACCCATCTCCA--------------------------------------------AACGCATTTA------------------ACTCGCT---GGCGAGT-CCTCGAA-----------AC----AAATCCCA--SizeHit CountTotal NormTotal
No Reads
droEug1
AT------------------------ATCTACATCTCCAACTCCAG------CTA--CAGCTCCTACTCGGCAGTATAT--GTAT---AATGATGTTCT--CCC---TGAAAAGGCTTAA-ATGTCTTCTACCTTGCGCGCTAATCAGAGACCGGGGCTGG-----TTTTT-----ACATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATACAT--CTC-C-----ATAT------------------------------GTCTTCATC-----------GCATTTA------------------ACTCGCT---GGCGAGT-CCTCGAA-----------AC----AAATCCCA--SizeHit CountTotal NormTotal
No Reads
dm3
CTGGCCTG-----------------GCTCTTCATCTTCAACTCCAGCCA---CCA--CAGTTCCTACTCGT---TATAT--GT-----GATGATGTTCC--CCCGACTG---------TA-AAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTTT----ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATAT--CTC-C-----ATCTTCAC----------------------------------CATAT-------------AAATAAGCGAAA--T----GCTCGCA---GGCGAGT-CCTCGCC-----------AG----AAATCCCA--SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................2317487238.00748723820001011101310413342880009002372243428724034860715135652175131089268353310131289327763037108105670447519247101757117829123035691734631232412600000000000000000000090817534775825392089231461921216313848582462088170113176749244414662012528424961082026611612319112171032674490853271112355743497456595629781423102613233048285127353959186193366249432002428742651535209109242863145941129403874481660483683114186113971594132420012866892974096718161180155570245715368156715659975328803595680285060352823318433126713395113198526561839811501913900287058752488588168350737385524240258823457073005116602150930135340562689931162441703742942121880519228918129007273523530876546461054139201154183981932216491947272152987166152159115774803152331316785413034493134126939760785717227602018484228653952276118668032737369595316408701913968951711600815857416115118417495755165993937817851787036110689270478596521223811243692667300117931635519864990131283113544149637485633139538347351553752189844149926811842335814083066348536830503062617354459164452502091159381288322796813369916841658890839
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................................................................................................................2115583494.0055834940000101219392948153140005001500106561123804237963212467939522261195392361340953221323057840188796237313151976940170536696471888030901524247218000000000000000000000304427322629122215324114229562326169299422317924339996114120231285202252753449811881107301292331012961915145370301117332231297103422813430281398368991207386360366710610426169171040582381415313041767512450152749132584024065455793922571411261123181465121827821396173763175805637329046124743231477183843332310722804934749318019304116451059945056727311669010020179228841413127615462126663844232868553462778437315762308351991818603155944411839565319492497236467126132800013268503112864560232720127860112353285088546532657526613819171915732139621766327175513621983053834964651338992403793661220417716461155158150379451583875417623270941989220004267381642353404214802049315534557316361153809519267987891041788228132558187704889449214122815656020228737411219233119072019310444811474837153406926489183053866250320160128502831374218680636171329293156252787533432409281060506196454619116005178881973411550010089913
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................2214379689.00437968920101715221318661112600090021882223636146075604612424316051047461914111440337972122317426316365031135873212678971854270540996248391014254674710000000000000000000006567582255361961131322919020818876165422812821275552129112111966502212815627766176415610137711125791781008271125311922431145171430552596750181531313377905585591093137652117037699702852701139860951002810779613811902240146617393187915102428547842873025165336254071163118180145818121849121445175747678259182629773323715417285038529934674417327123756459865103579310944310261765683307115600458200138481444492179441792606332078599161341769138559213482738745405240582300934543419509281001949134524920194209015081289347019516532117893139730103463463319815891119276108714259258317863045348914123630473501236341182821525370960299167781103301216582834384842507259893360378259131574152981717120470267414748321717602822413407526199704056010077910209247109938159245621545015467118498125747438201504104249312511722561892421196071432116450317473811670226842913433720415619867753097676974528218293786852663657022488
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGC....................................................................................................................................................................201512440.0051244000002036210002000200110163157410117726111114510301311096893425414703951375696152952072688422727863867438916524895100000000000000000000779658657294419621371612202010206810160082914261511241031213131101831189323724505628641367709580301085121331186925715461014803317218489689282668924228917131587136230248898123121411863736449564606559169241016076147135111621251148832211505971103124647833956486147031652303303012102259501682181481220913773615184915157571209383163221358114459971131131744884338234952532002131811073781314551633116670827519047538753391819299786510857612619019015751188118485941301065371420947951533170447172358247402384745132818717551229289341973293373946741932728421130892752801562205164712743653187150991010133416892331931309178772761235733341560823521508456079560214441154364641277511614350425849872677583752715621586325211579712651214740
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................241299131.0029913100000030202021000000628827101114214103931543421176311101911627331402259631035812779152102490000000000000000000000014151203116341425710229169061634812990051160475563794403317331506190129191102532309211126200211011928523225227111614812117014929113527922312091076235262804030019989401181002021051360172222911821241716176824684113157320070036110424921544338668222353110111654224453269482658415491246183812551113609341789794817125533861682274812230512655600237211549343719144473961604568232815615392140352199022821691432202972802775151911929323289586320913637242011987260415697843427262042272653739200535288353921457936038604560274546972017210453963545456448521415934411140212744787976619585969911146180934434171238530748242306686181239814334070110916320201
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................221180444.0018044400001042202002000000413732340023900000002310974656771610314041554226378813715852412190000000000000000000002021941577511101712415201211101177009252034654857992016601410566700200913551524107107000292381011094429289186248417184310274209302971682505701100426287138402227238186198014510106122518664416390331302630255526948931160131493772406000001201377118530623686373112591414235258975389768495819358396293460155411005034311555619554818439511881150802053943025251210717218725336715210837312393924301300322187484108147931528754510006286562385830816211009701782270170152117425237024993184254807534145146868172378517216405214834381866870774163331057625377709982533562546022373302138181839377718492771604214695252778112308
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCT.................................................................................................................................................................................................................231167798.00167798100035100312996102400736081115252236511088601601942039196147321491641882489342124459040430458011604333800000000000000000614940448911991485135874562339461401511211722413198470227231471562484939288241511314431026553908010538114429301011154147332222281920658236664938011786464275893373990123831178171111161175142013444255579123101422142652782841214671777114434555197831277342251181470202120010212101607725027410114651798166533306151478170364507508332483740435000010269101692615555040714301921682035915348986624443661941193442199427469313263251332852110140732933467125636352426659327774737325513679755873829613621224356321641391044944881221116730536122230589671167172281930213471388248552924903324644267131357958956971025801268248512789618724781326810270712032267128360
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................24189812.008981200000002100000000000284790001400000002578109664271331291324201720532931451700000000000000000000000197162179561407123011150125350011388187108201140171291001030150324225410103267283138021107691628511836855726101254437161010040303626192338450301010164412726311035021423522338772641242403197538460100018381971310483646152245193462201544158321180153278553385693680066135100001710039666194821293916611030292523191194617145996411194713316916963206283101554800210496371176395363301516142942741211810826252914491785522803523646557197424159482853654139018370821783046111219002891090122111361593337515804790720230425114062769
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........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGT....................................................................................................................................................................2011794.0017940000000000000000000000400070000000116220010132200131210000000000000000000000005440000010000000000000000000000000000000130001000004400450000129640122341410000000057038116020016161321903500571610000021000000100000030021868191310164101012100000011244334128940203024245513620158441646827104952533220023105355030191303184222140216812483452327544624304347863132713308177421000
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCTA................................................................................................................................................................................................................2411648.00164800002001100000000000200000000000000411031112012211020000000000000000000000000102121008110151026310010413201410201070000000000000000000000000010205594178880000000010023016312212625419000103403210011060000080202000100116301020117120010000000101504111000000010550012100422027138491592016619127416013111200080572150794612110385221311720616492919174103158106918121810
.........................................................................................................................................GCGCTAATCAGTGACCGGGGCT.................................................................................................................................................................................................................2211569.0015690000000000000000000012100021600000022024032302300021100000000000000000000000301100000003101001010000300001150000001000100000000002000000000000000254571541305000000001506303220322622460100182133200000800000200000007601824611629551091800000000100021892124203411302122279124713651482092732122143172104144101020271883322815412133240185226802821746568337153065102106171023140
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCG...................................................................................................................................................................1811380.0013800000000000000000000021000000000000000001100001001300000000000000000000000000110000000000000000000000000000000000000000000000000000010000100168022465241032000001007090001000000000000051600110000010220000003001200120118240001000000010000001101310000002024021311123630150512175610609527290122040111141035029271303197107033302363200012141102030
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTA..............................................................................................................................................................2611343.001343000000000000000000000000000000000000101200000101100000000000000000000000000013120000000000000000000000000000000000000000000000010000000216000002213100040000000000000000000110200000000000702250002426000007301201002006000100164400000000000010101001000000000021100010110026110211142817010104013000000200030006232101408122501031530107272626201224315122025443083021230
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAA.................................................................................................................................................................2311274.001274000000000000000000000000000000000001000010100001100010000000000000000000000012010100000000000000000000000000010100100000000000010000000010004602207121000000000000000000000000000000000200412200000500000022003000000500255106276510000000200000000010202003000031011120300019551860136701801000311301501011337717264100530344212127411307142847714402827276933102150
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGT..................................................................................................................................................................2011268.001268000000000000000000000200009000000061201000211112210010000000000000000000000011300000000010100000000000000000000000000000000000000000000000001020034383530070000020880001000010000001000070330530001051000000000000002948402249241374000000000003113121111480061101312054569113281511877115652221740800022022122211412223901183414383213373754292331621201317142229830190
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCCA................................................................................................................................................................2411195.00119500000000000000000000000000000000000132030010000224211000000000000000000000003100000600000000000100000000000000000000000000000001000000201102104411110100000000000400000000000000010000001000103000000500000720000000016510851169982800001000000110000001000001000110000000110012103219413941810100202000090000031424384211021634849216150241231147418371835614210
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA..............................................................................................................................................................2611185.00118500000000000000000000100000000000000622230200120000000000000000000000000000002100000000000000000000000000000000000000000000000000100000400100216080312000000000000000010000000010200000000000060000100000002511203014000410061050135231800000000000000000000000000000000000010100028132281152313523000000000060000617152610130013596181210112020256825671593100200
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAT...............................................................................................................................................................2511148.001148000000000000000000000000000000000000000000110000001010000000000000000000000010983000000000000000000000000000000000000100000010111100000001200220313100101000000030000303000000010002000000010010000002000004000000000073000101661472610021796600000000001000100010000100010122010010361257836866011010210100000034711133112611162952468203382763232142131652254615190
........................................................................................................................................CGCGCTAATCAGTGACCGGGGT..................................................................................................................................................................................................................2211109.0011090000000000000001000000020000000000010200002000000032000000000000000000000000000000001100020000001000210024110000001000000000000001000000000002101013301603100000010010031203452173548113360200110000000105000000400000002190181212011301000000002003015533913220210010524810013182224011104031376121361612301127315033121124114721374115424781315184346017131761752887130
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAA..............................................................................................................................................................2611075.001075000000000000000000000000000000000003010100100000200000000000000000000000000015010002010000000000000000000000000000101000000000010000001001001280102010000000000000000100000320201030000006112700003100000086100100000110124102113920001000000000000010100000000000000000100035135281173216285000000001020002002718321200035742110611214540131088371662332977
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................2211029.00102900000000000000000000000000000000002221111000000020110000000000000000000000002221000000000000000000000000000000000000000000000000000000000000810201102301000000001101001000000101010100003111122321100000000300000000014100254014930000010000000010101000100000001010013011004226437121491126100002101080001103216162303141961031232172341016631424834612210
droSim2
CTGGCCTGGC---TT--TA------TATCTACATCTTCAACTCCAG------CCG--CAGCTCCTACTCGT---TATAT--GT-----GATGATGTTCC--CCCGGCTG---------AA-AAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTTT----ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATAT--CTC-C-----ATCTCCGC----------------------------------CATAT-------------AAATAAGCCAAA--T----GCTCGCA---GGCGAGT-CCTCGCC-----------AG----AAATCCCA--SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................231523254.005232541962992622251009457410417543983277651615910511158551164333612491
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................................................................................................................211197740.0019774027041413072957012267631424294962448810410477818195512766240
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................221158428.001584282236199111453669002297130227266982056816046274114218157393415130
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................24196723.009672318332912100201252134917782102651115699988157992622
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................24141193.0041193113320810094379531873152434066443463284204
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................22121916.0021916213671950026093755288620255261227169018000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................................................................................................................22116931.00169311122221410028614140466230332631574051213001
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGC....................................................................................................................................................................2017111.007111125112756580096013011068946100435210336010037
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTT.................................................................................................................................................................2316572.00657202060082841414113546302000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................................................................................................................2516086.006086041100503465183941563884425001
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT..............................................................................................................................................................2614599.00459901000043312015201574328002
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................................................................................................................2313868.003868300190060171864239211631816528002
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGC................................................................................................................................................................2412578.002578234700586614443284837416129000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA...............................................................................................................................................................2512128.002128001100339397694373221180120000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCAA................................................................................................................................................................2412061.00206100380016123159747019752144000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................2311811.00181110016001081132910845562879004
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCT.................................................................................................................................................................................................................2311526.00152617715465569724429013183218322334210
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAA..............................................................................................................................................................2611473.00147300000015420648128643175164000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA..............................................................................................................................................................2611294.00129400530017121335218510029659000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCG.....................................................................................................................................................................1911022.0010221161177008277891481631214235106
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAT...............................................................................................................................................................251767.0076711200016114461513045298000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGC......................................................................................................................................................................181677.006775901620797432274080117007
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................221584.0058410013800203323131201581576023
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................211474.004740007002222131327494866000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAAA.............................................................................................................................................................271470.00470000100667314794726713000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA...............................................................................................................................................................251467.00467000000232621114263316001
........................................................................................................................................CGCGCTAATCAGTGACCGGGGC..................................................................................................................................................................................................................221409.0040910272199303014913842901060
..............................................................................................................................................................................................ACCTGAAGTAGCGCGCG.................................................................................................................................................................171341.0034100000041436912176000000
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................................................................................................................201334.003344201700491962422335000
.............................................................................................................................................................................................TACCTGAAGTAGCGCGCG.................................................................................................................................................................181326.0032600000081831082034000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTA.................................................................................................................................................................231323.0032300010091133506285000
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................211319.0031926020210613892442018204
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................................................................................................................231282.00282430000505930203355226000
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCG...................................................................................................................................................................191279.002790111010155619834413000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCA...................................................................................................................................................................211270.002700021000354543452851343001
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAT..............................................................................................................................................................261245.0024500000023010028211000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGG................................................................................................................................................................241244.0024463930060565113601522000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAA.................................................................................................................................................................231242.002420003002849784161432000
........................................................................................................................................CGCGCTAATCAGTGACCGGGG...................................................................................................................................................................................................................211240.002408521310746551613514000100
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCG...................................................................................................................................................................201239.00239310163002154731039100
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTTA................................................................................................................................................................241221.002210001001110004213000
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGC..................................................................................................................................................................191208.002080000000130204000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCAAA...............................................................................................................................................................251205.002050001001521663840555000
........................................................................................................................................CGCGCTAATCAGTGACCGGG....................................................................................................................................................................................................................201203.002034105385318499716102000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTA..............................................................................................................................................................261199.0019900000035323236145000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGATT..............................................................................................................................................................261176.0017600000074000011154000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTAA.............................................................................................................................................................271166.0016600010019164724013523000
..............................................................................................................................................................................................ACCTGAAGTAGCGCGC..................................................................................................................................................................161165.001650000001163154000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAT.................................................................................................................................................................231151.00151000000111374505106000
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCG...................................................................................................................................................................181151.001510002000000148100000
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGCG.................................................................................................................................................................201150.001500000000000150000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCT...................................................................................................................................................................211138.00138000320091171321360000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAAA................................................................................................................................................................241138.00138001400111655401055000
........................................................................................................................................CGCGCTAATCAGTGACCG......................................................................................................................................................................................................................181137.00137251011464800004000110
............................................................................................................................................................................................GTACCTGAAGTAGCGCGC..................................................................................................................................................................181136.0013601200061319194000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCTA................................................................................................................................................................241135.0013501110014212346829000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTAA................................................................................................................................................................241131.00131000000714202030463000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGG..................................................................................................................................................................221123.0012311241150071292551418000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAT..............................................................................................................................................................261122.0012200000010862001086000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................................................................................................................211116.00116002100121231111851410000
........................................................................................................................................CGCGCTAATCAGTGACCGG.....................................................................................................................................................................................................................191110.001106106364435242000010
............................................................................................................................................................................................GTACCTGAAGTAGCGCGCG.................................................................................................................................................................191103.00103000000176584000000
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCTT................................................................................................................................................................................................................24199.0099182011100764264414110
...............................................................................................................................................................................................CCTGAAGTAGCGCGCG.................................................................................................................................................................16198.0098000000715101452000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGT....................................................................................................................................................................20197.0097010000212231184000
..............................................................................................................................................................................................ACCTGAAGTAGCGCG...................................................................................................................................................................15192.0092000000559469000000
...............................................................................................................................................................................................CCTGAAGTAGCGCGC..................................................................................................................................................................15180.00800000002351555000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCAA..................................................................................................................................................................22178.00780001007635211034000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAC...............................................................................................................................................................25174.00740021002596310198000
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................23171.007100150032521901220002
............................................................................................................................................................................................GTACCTGAAGTAGCGCG...................................................................................................................................................................17170.0070000000113164000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCCG..................................................................................................................................................................22169.006900000061077102018000
..............................................................................................................................................................................................ACCTGAAGTAGCGCGCGT................................................................................................................................................................18165.00650001005833612000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGA....................................................................................................................................................................20165.00650000001115111430011000
.............................................................................................................................................................................................TACCTGAAGTAGCGCGCGA................................................................................................................................................................19162.006200000013123421000000
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCC.................................................................................................................................................................................................................23161.006128201300000000000000
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................22161.00610000005548250410000
.............................................................................................................................................................................................TACCTGAAGTAGCGCGC..................................................................................................................................................................17158.0058000000206446000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGATA..............................................................................................................................................................26158.00580020000231101336000
.............................................................................................................................................................................................TACCTGAAGTAGCGCG...................................................................................................................................................................16157.005700000010715619000000
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................22157.005700000024331401417000
................................................................................................................................................................................................CTGAAGTAGCGCGCG.................................................................................................................................................................15153.00530000003861323000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTTA.............................................................................................................................................................27153.0053000000100000250000
.................................................................................................................................................................................................TGAAGTAGCGCGCGT................................................................................................................................................................15152.00520000001552480000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCTT..................................................................................................................................................................22251.50103020500250000089000
...........................................................................................................................................................................................GGTACCTGAAGTAGCGC....................................................................................................................................................................17150.0050000000000050000000
..............................................................................................................................................................................................ACCTGAAGTAGCGCGCGA................................................................................................................................................................18149.00490000001072147000000
.............................................................................................................................................................................................TACCTGAAGTAGCGCGCGT................................................................................................................................................................19147.00470000001082333000000
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCTA................................................................................................................................................................................................................24146.0046011000211928066000
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................23143.0043000100000138012000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTC...............................................................................................................................................................25143.004300000088951066000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGACA..............................................................................................................................................................26139.0039003000671200182000
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGC....................................................................................................................................................................19139.0039120340001010000000
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................22139.00390000004510413012000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCCA................................................................................................................................................................24138.00380000005341040120000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGCA...............................................................................................................................................................25137.0037000100015420168000
droSec2
CTGGTCTGGC---TT--TA------TATCTACATCTTCAACTCCAG------CCG--CAGCTCCTACTCGT---TATAT--GT-----GATGATGTTCC--CCCGACTG---------AA-AAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTTG-----TTTTTT----ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-GCAGACATATAT--CTC-C-----ATCTCCGT----------------------------------CATAT-------------AAATAAGCCAAA--T----GCTCGCA---GGCGAGTTCCTCGCC-----------AG----AAATCCCA--SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................23199746.009974629487207872129428178
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................22180599.00805993864121846101539959
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................................................................................................................21154138.00541381679318088114247833
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................2418103.0081032527192819291719
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGC....................................................................................................................................................................2017493.00749326673081988757
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................2213672.00367212591437545431
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................2412766.0027668781127297464
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................................................................................................................2212449.0024499651049307128
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCT.................................................................................................................................................................................................................2312332.002332647396921368
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................2112092.0020922036241715
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................2211561.0015611484172436
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................2311407.00140772633879264
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................................................................................................................251996.0099623134556364
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCG...................................................................................................................................................................201834.008348098710
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCG.....................................................................................................................................................................191760.007604251529093
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................................................................................................................231690.00690148140240162
........................................................................................................................................CGCGCTAATCAGTGACCGGGGC..................................................................................................................................................................................................................221528.005281537770228
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................211506.005069471160181
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCTT................................................................................................................................................................................................................241408.00408210971487
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTT.................................................................................................................................................................231382.00382961711699
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................................................................................................................201347.003471081047164
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................................................................................................................231329.00329142794068
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGC................................................................................................................................................................241317.00317155486549
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCG...................................................................................................................................................................191264.00264376610358
........................................................................................................................................CGCGCTAATCAGTGACCGGGG...................................................................................................................................................................................................................211219.0021992492157
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCT...................................................................................................................................................................211212.002121791779
........................................................................................................................................................................................TCAGGTACCTGAAGTAGC......................................................................................................................................................................181166.001662706178
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGC....................................................................................................................................................................191152.00152149102
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCTA................................................................................................................................................................241140.0014017472452
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................................................................................................................211134.001349818810
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT..............................................................................................................................................................261123.001234252722
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................231116.00116112112
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA...............................................................................................................................................................251108.001089392535
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTA.................................................................................................................................................................23191.0091116677
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCA...................................................................................................................................................................21191.00913032209
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA...............................................................................................................................................................25186.008620361218
........................................................................................................................................CGCGCTAATCAGTGACCGGG....................................................................................................................................................................................................................20183.008347111015
........................................................................................................................................CGCGCTAATCAGTGACCGGGGT..................................................................................................................................................................................................................22173.00732326519
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCTTT-----..........................................................................................................................................................................................................25162.0062421019
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAA.................................................................................................................................................................23161.0061183553
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................21156.005653300
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAT...............................................................................................................................................................25155.00551228114
.........................................................................................................................................GCGCTAATCAGTGACCGGGGCT.................................................................................................................................................................................................................22154.005444424
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGA....................................................................................................................................................................20151.0051163032
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGA..................................................................................................................................................................21148.004848000
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................23147.004745200
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTA..............................................................................................................................................................26145.0045421911
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTTA................................................................................................................................................................24145.004553028
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGG................................................................................................................................................................24141.004130542
........................................................................................................................................CGCGCTAATCAGTGACCGG.....................................................................................................................................................................................................................19139.003930117
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGT....................................................................................................................................................................20139.0039151833
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................22138.0038123167
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................22138.003836101
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCTA................................................................................................................................................................................................................24136.0036141354
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCAA................................................................................................................................................................24134.0034610126
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCCA................................................................................................................................................................24129.002911954
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCCG....................................................................................................................................................................20129.002925301
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGC....................................................................................................................................................................18128.002811656
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCCG..................................................................................................................................................................22127.002727000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAT.................................................................................................................................................................23127.0027101232
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA..............................................................................................................................................................26127.00279891
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGC..................................................................................................................................................................19126.002616361
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCTA..................................................................................................................................................................22125.0025111103
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................23124.002424000
........................................................................................................................................CGCGCTAATCAGTGACCGGGGA..................................................................................................................................................................................................................22123.002341414
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCG.....................................................................................................................................................................18123.002323000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAT..............................................................................................................................................................26122.002231234
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................24119.001919000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCTT..................................................................................................................................................................22219.003829603
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGATT..............................................................................................................................................................26119.00199712
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCCGC...................................................................................................................................................................21318.6756371054
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGCG.................................................................................................................................................................20118.001811250
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGCT...............................................................................................................................................................25118.001811115
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTAA................................................................................................................................................................24118.001841040
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGG..................................................................................................................................................................22117.00179332
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAAA................................................................................................................................................................24117.001731220
............................................................................................................................................................................................GTACCTGAAGTAGCGCGCG.................................................................................................................................................................19116.00166271
........................................................................................................................................CGCGCTAATCAGTGACCGGGT...................................................................................................................................................................................................................21115.00156810
............................................................................................................................................................................................GTACCTGAAGTAGCGCGC..................................................................................................................................................................18114.00148330
.............................................................................................................................................................................................TACCTGAAGTAGCGCGCG.................................................................................................................................................................18113.00138023
droYak3
TT---------------TA------TATCTACATCTTCAACTCCAG------CCA--CAGCTCCTACTCGT---TATAT--GC-----GATGATGTTCC--CCCGACTG-AA------CA-GAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTTT----ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATAT--CTC-C-----AACTCCAC--------------------------GA------TATAT-------------AAATAAGCCAAA--A----GCTCGCA---GGCGAGT-CCTCCAA-----------AG----AAACCC----SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................22179339.007933916223457535433107572813054517123654
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................................................................................................................21141991.0041991451369218135375640579550661025134
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................23139366.003936631324310105407612133462436511628793
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGC....................................................................................................................................................................2018506.008506202816318220611124617442029150
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................2413438.0034381381803901348142454222267
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................2112426.002426323734111330010
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................2212282.0022824124043148471014071030
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCT.................................................................................................................................................................................................................2311690.001690131111310718538514000043
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................2211631.001631016021900210016
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCG.....................................................................................................................................................................1911282.00128218101591134751831170
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCG...................................................................................................................................................................201927.0092708784800100000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................241903.0090333477275300040011037
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................................................................................................................221840.00840033136868106570000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................231774.007740380339758320120
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................................................................................................................231303.0030313525910160000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGC................................................................................................................................................................241300.00300105922810020000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................................................................................................................231241.002410140601025230010
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................................................................................................................211214.0021402196102130000
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGC....................................................................................................................................................................191207.002070201500010000
........................................................................................................................................CGCGCTAATCAGTGACCGGGGC..................................................................................................................................................................................................................221202.00202491081673730009
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................................................................................................................201175.0017511119744390000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGC......................................................................................................................................................................181159.0015903613010180102457
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGG..................................................................................................................................................................221134.0013413110404030000
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................231132.0013201032000000027
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................................................................................................................251132.0013216533100241007
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTT.................................................................................................................................................................231124.0012405511238450000
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................211121.001211853834170000
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCG...................................................................................................................................................................191119.00119040143434240000
........................................................................................................................................CGCGCTAATCAGTGACCGGGG...................................................................................................................................................................................................................211102.00102259111512100020
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................21185.0085081400000000
.........................................................................................................................................GCGCTAATCAGTGACCGGGGCT.................................................................................................................................................................................................................22180.0080078101000000
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCTT................................................................................................................................................................................................................24171.0071847303130006
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCA...................................................................................................................................................................21162.006201921410170000
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCC.................................................................................................................................................................................................................23160.00602213700000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCT...................................................................................................................................................................21160.00600173011380000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGG................................................................................................................................................................24154.00542815511010003
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCG.....................................................................................................................................................................18150.0050050000000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGT....................................................................................................................................................................20144.00440122002370000
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................23132.0032032000000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCTA................................................................................................................................................................24132.00321151200040000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCAA................................................................................................................................................................24130.0030023410020000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT..............................................................................................................................................................26129.0029018600030020
........................................................................................................................................CGCGCTAATCAGTGACCGG.....................................................................................................................................................................................................................19128.0028022101210010
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA...............................................................................................................................................................25127.0027018720000000
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGA..................................................................................................................................................................21127.0027027000000000
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................23125.0025025000000000
........................................................................................................................................CGCGCTAATCAGTGACCGGG....................................................................................................................................................................................................................20124.0024017011210020
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA..............................................................................................................................................................26124.00240131000010000
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGC..................................................................................................................................................................19124.0024017200130001
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................24123.0023023000000000
........................................................................................................................................................................................TCAGGTACCTGAAGTA........................................................................................................................................................................16119.0019000000000613
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................22118.0018018000000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTC...............................................................................................................................................................25116.0016011500000000
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................22116.0016010100140000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAAA.............................................................................................................................................................27116.0016001000000015
............................................................................................................................................................................................GTACCTGAAGTAGCGCGC..................................................................................................................................................................18115.0015012110010000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA...............................................................................................................................................................25115.001506300060000
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGC....................................................................................................................................................................18114.001405101160000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTA.................................................................................................................................................................23114.001406310220000
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCTA................................................................................................................................................................................................................24113.0013012000010000
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGCG.................................................................................................................................................................20113.0013013000000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAT...............................................................................................................................................................25113.001325500010000
............................................................................................................................................................................................GTACCTGAAGTAGCGCGCG.................................................................................................................................................................19112.001208100020001
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCTT..................................................................................................................................................................22211.002217700160000
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCA.................................................................................................................................................................22110.0010010000000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAG.......................................................................................................................................................................17110.0010000000000100
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCG...................................................................................................................................................................22110.0010010000000000
droEre2
TT---------------TA------TGTCTACATCTTCAACTGCAGCCCCAGCCG--CAGCTCCTACTCGT---TGTAT--GT-----GATGATGTTCC--CCCGACTG---------AA-AAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTTT----ATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CCAGACATATAT--CTC-C-----ATCTCCAC----------------------------------CATAT-------------AAATAAGACAAA--T----GCTCGCA---GGCGAGT-CCT-------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................23197996.009799647037942237735113111274126766
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................22192078.00920786693323651574608131237192283
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................................................................................................................21190851.009085147090130514391511268801255076
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGC....................................................................................................................................................................20112090.0012090507426915174549993390
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................2216679.0066792802338720339630338
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................2414977.00497720194512737498291205
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCG.....................................................................................................................................................................1913876.003876152514702189635910
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................2113782.003782375072011120
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCG...................................................................................................................................................................2012614.002614257340118180
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCT.................................................................................................................................................................................................................2312610.002610640457647780553469
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................2212512.0025122400230174941
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................................................................................................................2211792.0017921315351231345531
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................2311570.0015707911130311955957
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................241994.00994437248513898284
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................................................................................................................231820.00820302151391243489
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCT...................................................................................................................................................................211513.0051342720521580
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................................................................................................................231509.0050911714551431638
........................................................................................................................................CGCGCTAATCAGTGACCGGGGC..................................................................................................................................................................................................................221495.00495100147927193145
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................211388.003881191221322130
........................................................................................................................................CGCGCTAATCAGTGACCGGGG...................................................................................................................................................................................................................211337.003371262142631300
........................................................................................................................................................................................TCAGGTACCTGAAGTAGC......................................................................................................................................................................181314.003141056001816817
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTT.................................................................................................................................................................231300.00300134090120370
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGC....................................................................................................................................................................191285.00285282000300
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCG...................................................................................................................................................................191253.0025395081065750
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................................................................................................................201239.00239159110128400
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGC................................................................................................................................................................241219.00219119104191858
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................................................................................................................251214.002148716036786
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................................................................................................................211202.0020215192717160
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGT....................................................................................................................................................................201165.001656625079130
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCTT................................................................................................................................................................................................................241151.0015159031312334
........................................................................................................................................CGCGCTAATCAGTGACCGGG....................................................................................................................................................................................................................201148.001486407029480
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................211148.00148148000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCA...................................................................................................................................................................211136.00136711035290
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................23193.009390010020
........................................................................................................................................CGCGCTAATCAGTGACCGG.....................................................................................................................................................................................................................19186.0086630001760
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCG.....................................................................................................................................................................18186.008684000110
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCCG....................................................................................................................................................................20163.006354000630
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGA..................................................................................................................................................................21163.006363000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCAA................................................................................................................................................................24160.006047100660
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................23159.0059280000229
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTA.................................................................................................................................................................23154.0054180202770
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCCG..................................................................................................................................................................22154.005447000250
.........................................................................................................................................GCGCTAATCAGTGACCGGGGCT.................................................................................................................................................................................................................22153.005345000530
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................22153.005353000000
........................................................................................................................................CGCGCTAATCAGTGACCGGGGT..................................................................................................................................................................................................................22151.0051702016917
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................23143.004343000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGG................................................................................................................................................................24142.004229000328
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGCG.................................................................................................................................................................20139.0039151002615
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA...............................................................................................................................................................25138.0038900051113
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGC....................................................................................................................................................................18137.0037180001180
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGG..................................................................................................................................................................22135.003529000510
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCCGC...................................................................................................................................................................21234.5069550101030
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGA....................................................................................................................................................................20134.0034120001750
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAA.................................................................................................................................................................23133.0033180101400
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT..............................................................................................................................................................26131.003126000320
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCTA................................................................................................................................................................24130.003017000580
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAT...............................................................................................................................................................25127.002730003120
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA..............................................................................................................................................................26124.002419200300
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................24124.002424000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAAA................................................................................................................................................................24123.002315000800
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGTT...................................................................................................................................................................21122.002270001230
........................................................................................................................................................................................TCAGGTACCTGAAGTA........................................................................................................................................................................16122.002200000022
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCA.................................................................................................................................................................................................................23121.002120100810
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA...............................................................................................................................................................25121.00217000437
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCG...................................................................................................................................................................22121.002121000000
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGC..................................................................................................................................................................19121.002118000120
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCTT..................................................................................................................................................................22220.0040270001210
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCA.................................................................................................................................................................22120.002018100100
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCTA................................................................................................................................................................................................................24117.00174000229
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTTA................................................................................................................................................................24117.001750001110
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCTTT-----..........................................................................................................................................................................................................25117.00179000530
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGT..................................................................................................................................................................20116.00169000430
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................22116.001620101120
........................................................................................................................................CGCGCTAATCAGTGACCGGGGA..................................................................................................................................................................................................................22116.00163000850
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCT.....................................................................................................................................................................19116.00167010620
dp5
AT------------------------ATCTCGTCCCACAACCCCAA------C--------------------------------------------CC--ACCTTCTT---------GA-AAGTCTCCTACCATGCGCGCTAATCAGAGACCGGGGCTGG-----TTTTTT----CACTGCAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CTAGACACGAA--CAT------------------------------------CTGTGTGGCATCATC-----------GTTT---------------CTA--------------------------------GGGAAT-AC--------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................................................................................................................21169204.006920411530102608393268813037224633776558
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................22157526.0057526333842053081407736166769465914991919
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................23131465.0031465517258639476141163977055677062329
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGC....................................................................................................................................................................20114661.0014661210995121929138634711913882110
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................................................................................................................2219334.0093340850536513126934480
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................2218238.008238363133311271131699745213917
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCG...................................................................................................................................................................2013379.00337903351932212000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................2412846.0028461148883854123691101127143
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................2112595.002595125061553553115
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCG.....................................................................................................................................................................1912044.00204401657532328176765224
........................................................................................................................................CGCGCTAATCAGAGACCGGGGCT.................................................................................................................................................................................................................2311359.0013594844232617581361722212
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................2411161.00116108781225945960159
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................2211147.00114701088450638123
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGC....................................................................................................................................................................191804.00804080010102000
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGA..................................................................................................................................................................211528.00528052510101000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................................................................................................................231441.00441128833181884116
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................................................................................................................201391.00391022068321121147
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTT.................................................................................................................................................................231384.0038402664729791151
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................211363.00363016626128145168
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................211358.00358035400003010
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................231343.003430233321111051212
........................................................................................................................................CGCGCTAATCAGAGACCGGGG...................................................................................................................................................................................................................211331.0033102502156158341
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCG...................................................................................................................................................................191310.0031001982032564414
........................................................................................................................................CGCGCTAATCAGAGACCGGGGC..................................................................................................................................................................................................................221269.0026911415747132683
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................................................................................................................251246.00246012034111902141
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGC................................................................................................................................................................241208.00208011945181613303
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................................................................................................................231198.00198010525312440423
........................................................................................................................................CGCGCTAATCAGAGACCGGG....................................................................................................................................................................................................................201176.0017601231017191321
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCG.....................................................................................................................................................................181116.00116011501000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAA.................................................................................................................................................................231102.0010208960700000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCA...................................................................................................................................................................211102.00102073100647110
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGA....................................................................................................................................................................20196.009608420601201
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGT....................................................................................................................................................................20190.009006762078000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAAA................................................................................................................................................................24187.008708310002010
........................................................................................................................................CGCGCTAATCAGAGACCGG.....................................................................................................................................................................................................................19183.008306510133226
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................23178.007807100002221
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................23169.006906810000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT..............................................................................................................................................................26166.006604901009160
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCCA................................................................................................................................................................24165.0065033110129000
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGC....................................................................................................................................................................18165.006505110327010
........................................................................................................................................................................................TCAGGTACCTGAAGTAGC......................................................................................................................................................................18164.006404951120213
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA..............................................................................................................................................................26163.006305470000200
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................................................................................................................21163.0063093831111000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCAA................................................................................................................................................................24157.005704910104200
.........................................................................................................................................GCGCTAATCAGAGACCGGGGCT.................................................................................................................................................................................................................22152.005204800003001
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGG..................................................................................................................................................................22148.004804310301000
........................................................................................................................................CGCGCTAATCAGAGACCGGGGCTT................................................................................................................................................................................................................24148.004802901006228
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCT...................................................................................................................................................................21147.004702892314000
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCG...................................................................................................................................................................22147.004704700000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA...............................................................................................................................................................25144.004403460103000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCAA..................................................................................................................................................................22143.004303640201000
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGT..................................................................................................................................................................20142.004202900029020
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCG...................................................................................................................................................................18141.004104000100000
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................22140.0040015120313303
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGC..................................................................................................................................................................19138.003803211103000
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGA..................................................................................................................................................................20135.003502910401000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTA.................................................................................................................................................................23132.0032020100110000
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................23131.003103100000000
........................................................................................................................................CGCGCTAATCAGAGACCGGGGT..................................................................................................................................................................................................................22129.0029014000213000
............................................................................................................................................................................................GTACCTGAAGTAGCGCGC..................................................................................................................................................................18126.002602500100000
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGCG.................................................................................................................................................................20124.002402100102000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCTT..................................................................................................................................................................22123.002301502105000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCCC................................................................................................................................................................24120.002001041005000
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCC.................................................................................................................................................................22120.002001700012000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAC.................................................................................................................................................................23119.001901431001000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCTA................................................................................................................................................................24118.001801220103000
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGTT.................................................................................................................................................................22117.001701600001000
........................................................................................................................................CGCGCTAATCAGAGACCGGGGCC.................................................................................................................................................................................................................23117.00170089000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTTA................................................................................................................................................................24116.00160810105010
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................22116.001601500010000
.........................................................................................................................................GCGCTAATCAGAGACCGGGG...................................................................................................................................................................................................................20115.001501400000100
........................................................................................................................................CGCGCTAATCAGAGACCGGGGCTTT-----..........................................................................................................................................................................................................25114.001401300001000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTAA................................................................................................................................................................24114.001401010002100
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGG................................................................................................................................................................24114.00140930001100
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA...............................................................................................................................................................25113.00130600014020
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCA.....................................................................................................................................................................19112.00120900020100
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................22112.00120900003000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCT.....................................................................................................................................................................19111.00110910010000
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................24111.001101100000000
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................21111.00110210008000
........................................................................................................................................CGCGCTAATCAGAGACCGGGT...................................................................................................................................................................................................................21111.00110600121010
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGGAG................................................................................................................................................................24111.001100000001100
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCCA................................................................................................................................................................23110.00100800002000
.........................................................................................................................................GCGCTAATCAGAGACCGGGGC..................................................................................................................................................................................................................21110.001001000000000
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGTT...............................................................................................................................................................24110.001001000000000
............................................................................................................................................................................................GTACCTGAAGTAGCGCGCG.................................................................................................................................................................19110.00100810001000
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCC.................................................................................................................................................................2119.0090700002000
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGA..................................................................................................................................................................2319.0090900000000
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................2319.0090900000000
........................................................................................................................................CGCGCTAATCAGAGACCGGT....................................................................................................................................................................................................................2019.0090601011000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCAC................................................................................................................................................................2419.0090630000000
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGT..................................................................................................................................................................1918.0080700001000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTC.................................................................................................................................................................2318.0080231011000
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGC....................................................................................................................................................................2118.0080800000000
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCA.................................................................................................................................................................2218.0080800000000
.........................................................................................................................................GCGCTAATCAGAGACCGGG....................................................................................................................................................................................................................1918.0080800000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAA..............................................................................................................................................................2618.0080800000000
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGAAA................................................................................................................................................................2318.0080800000000
droPer2
AT------------------------ATCTCGTCCCACAACCCCAA------C--------------------------------------------CC--ACCTTCTT---------GA-AAGTCTCCTACCATGCGCGCTAATCAGAGACCGGGGCTGG-----TTTTTT----CACTGCAGTCAGGTACCTGAAGTAGCGCGCGTGGTG-CTAGACACGAA--CAT------------------------------------CTGTGTGGCATCATC-----------GTTT---------------CTA--------------------------------GGGAAT-AC--------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................................................................................................................21127998.00279983917821182895419185438
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................22125709.002570948516158547145430084057
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................23111397.0011397143510419212529043802
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGC....................................................................................................................................................................2015110.005110123232267271594734
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................2212945.00294511478641142181070
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................................................................................................................2212519.002519623621145923
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................2111013.0010132964062615
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................241986.009861240025717498
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCG...................................................................................................................................................................201978.0097809653352
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCG.....................................................................................................................................................................191806.0080604881666125111
........................................................................................................................................CGCGCTAATCAGAGACCGGGGCT.................................................................................................................................................................................................................231567.0056794220133913665
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................221319.0031913022482
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................241296.002964419047051
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGC....................................................................................................................................................................191205.0020502010211
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTT.................................................................................................................................................................231199.001990563419117
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................................................................................................................231150.0015010832132418
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................231136.001360800191621
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGA..................................................................................................................................................................211125.0012501241000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................................................................................................................251103.0010302106076
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................................................................................................................20199.009915455313
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................................................................................................................23197.0097148129819
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................21189.00890880010
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGC................................................................................................................................................................24188.00887691416
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCG...................................................................................................................................................................19186.0086042168155
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGG..................................................................................................................................................................22175.00752674110
........................................................................................................................................CGCGCTAATCAGAGACCGGG....................................................................................................................................................................................................................20156.0056023271410
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................21153.0053019116161
........................................................................................................................................................................................TCAGGTACCTGAAGTAGC......................................................................................................................................................................18148.004801711281
........................................................................................................................................CGCGCTAATCAGAGACCGGGGC..................................................................................................................................................................................................................22141.004115184211
........................................................................................................................................CGCGCTAATCAGAGACCGGGG...................................................................................................................................................................................................................21139.00390270381
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCA...................................................................................................................................................................21138.00380207335
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCG.....................................................................................................................................................................18130.00300290010
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCCA................................................................................................................................................................24129.002901201511
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCT...................................................................................................................................................................21129.00290180245
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGA....................................................................................................................................................................20126.00260240200
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTA.................................................................................................................................................................23126.00260101258
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................23124.00240210201
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGC....................................................................................................................................................................18122.0022092371
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................................................................................................................21122.00220111163
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAAA................................................................................................................................................................24121.00210210000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGT....................................................................................................................................................................20119.0019080443
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAA.................................................................................................................................................................23118.00180171000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCTT..................................................................................................................................................................22117.00170201212
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................23116.00160160000
.........................................................................................................................................GCGCTAATCAGAGACCGGGGCT.................................................................................................................................................................................................................22115.00150120012
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................23115.00150150000
........................................................................................................................................CGCGCTAATCAGAGACCGGGGCTT................................................................................................................................................................................................................24114.0014650012
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCG...................................................................................................................................................................18112.00120100101
........................................................................................................................................CGCGCTAATCAGAGACCGGGGT..................................................................................................................................................................................................................22112.0012040224
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGT..................................................................................................................................................................20112.0012021261
........................................................................................................................................CGCGCTAATCAGAGACCGG.....................................................................................................................................................................................................................19112.0012070032
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCC.................................................................................................................................................................22111.00110110000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT..............................................................................................................................................................26111.0011050006
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGC..................................................................................................................................................................19111.0011063011
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA...............................................................................................................................................................25111.00110001010
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCAA................................................................................................................................................................24111.0011170111
........................................................................................................................................CGCGCTAATCAGAGACCGGGGCC.................................................................................................................................................................................................................23110.0010910000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA..............................................................................................................................................................26110.0010370000
............................................................................................................................................................................................GTACCTGAAGTAGCGCGC..................................................................................................................................................................18110.0010150112
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCG...................................................................................................................................................................22110.00100100000
........................................................................................................................................CGCGCTAATCAGAGACCG......................................................................................................................................................................................................................1819.009300060
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................2219.009080010
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGG................................................................................................................................................................2419.009341010
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTTA................................................................................................................................................................2419.009020007
........................................................................................................................................CGCGCTAATCAGAGACCGGGT...................................................................................................................................................................................................................2118.008200123
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGA..................................................................................................................................................................2018.008071000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCCGC...................................................................................................................................................................2118.008070100
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCAC................................................................................................................................................................2417.007150010
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAC...............................................................................................................................................................2516.006420000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCAA..................................................................................................................................................................2216.006041010
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA...............................................................................................................................................................2516.006230001
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCCC................................................................................................................................................................2415.005010112
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................2415.005040001
............................................................................................................................................................................................GTACCTGAAGTAGCGCGCG.................................................................................................................................................................1915.005040001
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCCA................................................................................................................................................................2314.004030001
droWil2
---------------------------------------------------------------------------------------------------------------------------GTCTCTTACCTTGCGCGCTAATCAGTGACCAGGGCTGAGTAATTTTATT----CAATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTT-TTAGACCAAGATTCAT--C------------GCACGACGACGGCGACAACGACGA---CACAACA--------------AAA---------------AAA----------------CCATTTTAATCCATTTGGGATTTACCCCAAAGTTTTATTSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................23165492.006549256745745267187377772
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................................................................................................................21163267.006326762157482804432331420
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................22150140.0050140871189421861259582508
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGC....................................................................................................................................................................2015450.0054501716886152798332
........................................................................................................................................CGCGCTAATCAGTGACCAGGGCT.................................................................................................................................................................................................................2314820.00482028561011193238522
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................2414288.004288513150102537448
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................2212683.002683226522918
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................2412258.0022581513352880179
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................................................................................................................2212248.002248070918149229
........................................................................................................................................CGCGCTAATCAGTGACCAGGGC..................................................................................................................................................................................................................2211448.00144870114533150419
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................2111210.001210011865163
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCG...................................................................................................................................................................201915.0091508843280
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................221911.0091103307746737
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................................................................................................................231618.0061801061045844
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCG.....................................................................................................................................................................191563.0056303143919317
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCG...................................................................................................................................................................191387.00387043153218
........................................................................................................................................CGCGCTAATCAGTGACCAGGGCC.................................................................................................................................................................................................................231341.003413400001
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................................................................................................................201283.002830611818915
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................211266.002662137205849
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................................................................................................................231265.0026524155213926
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGC................................................................................................................................................................241236.002361018981712
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................231194.0019401055759
........................................................................................................................................CGCGCTAATCAGTGACCAGGG...................................................................................................................................................................................................................211157.0015757763039
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCAA................................................................................................................................................................241140.001400690701
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGC....................................................................................................................................................................191139.001390133141
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................231138.001380137001
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................................................................................................................251132.0013209371121
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCA...................................................................................................................................................................21197.009701510675
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA..............................................................................................................................................................26194.00940740200
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCT...................................................................................................................................................................21192.0092041870
........................................................................................................................................................................................TCAGGTACCTGAAGTAGC......................................................................................................................................................................18192.009203025010
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA...............................................................................................................................................................25186.00860390443
.........................................................................................................................................GCGCTAATCAGTGACCAGGGCT.................................................................................................................................................................................................................22182.0082272323
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................23171.0071071000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................................................................................................................21166.0066143571
........................................................................................................................................CGCGCTAATCAGTGACCAGGGCG.................................................................................................................................................................................................................23161.0061600001
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCCA................................................................................................................................................................24158.00581201279
........................................................................................................................................CGCGCTAATCAGTGACCAGGGCTT................................................................................................................................................................................................................24153.00532023550
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................24151.0051149100
........................................................................................................................................CGCGCTAATCAGTGACCAGGGCTC................................................................................................................................................................................................................24146.0046404011
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGG................................................................................................................................................................24145.0045835020
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGCG.................................................................................................................................................................20139.0039025365
........................................................................................................................................CGCGCTAATCAGTGACCAGG....................................................................................................................................................................................................................20135.0035227042
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA...............................................................................................................................................................25134.00340141118
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGA..................................................................................................................................................................21133.0033033000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCTA................................................................................................................................................................24130.0030050250
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGC....................................................................................................................................................................18128.0028042193
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAA..............................................................................................................................................................26126.00260120131
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT..............................................................................................................................................................26126.0026023012
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAAA................................................................................................................................................................24125.00250120130
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAA.................................................................................................................................................................23124.0024050190
............................................................................................................................................................................................GTACCTGAAGTAGCGCGCG.................................................................................................................................................................19124.0024022011
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGC..................................................................................................................................................................19124.0024014343
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGG..................................................................................................................................................................22122.0022182110
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGA....................................................................................................................................................................20120.002007076
.............................................................................................................................................................................................TACCTGAAGTAGCGCGCG.................................................................................................................................................................18119.0019015022
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCCGC...................................................................................................................................................................21118.001809441
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................22118.001807434
............................................................................................................................................................................................GTACCTGAAGTAGCGCGC..................................................................................................................................................................18117.0017011231
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................21117.0017017000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCCG..................................................................................................................................................................22116.0016013012
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCC.................................................................................................................................................................22116.0016015100
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCAAA...............................................................................................................................................................25116.0016060100
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGA..................................................................................................................................................................20116.0016041110
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAAA.............................................................................................................................................................27115.0015011040
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................22115.0015015000
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCG...................................................................................................................................................................18115.0015011130
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTT.................................................................................................................................................................23114.001405360
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCG.....................................................................................................................................................................18114.0014014000
.........................................................................................................................................GCGCTAATCAGTGACCAGGGC..................................................................................................................................................................................................................21113.001325015
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCCG....................................................................................................................................................................20113.001309040
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCA.................................................................................................................................................................22113.0013012010
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAT...............................................................................................................................................................25112.001215060
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCAA..................................................................................................................................................................22112.001203090
........................................................................................................................................CGCGCTAATCAGTGACCAGGGCTTT...............................................................................................................................................................................................................25111.0011010001
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCG...................................................................................................................................................................22111.0011011000
........................................................................................................................................CGCGCTAATCAGTGACCAGGGCTGA...............................................................................................................................................................................................................25111.001102810
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................2219.00904050
........................................................................................................................................CGCGCTAATCAGTGACCAG.....................................................................................................................................................................................................................1919.00944010
........................................................................................................................................CGCGCTAATCAGTGACCAGGGCTA................................................................................................................................................................................................................2419.00916110
..........................................................................................................................................CGCTAATCAGTGACCAGGGCT.................................................................................................................................................................................................................2118.00812023
.............................................................................................................................................TAATCAGTGACCAGGGCT.................................................................................................................................................................................................................1818.00852001
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................2318.00808000
droVir3
GT---CTG------------------CTCTC-------TCCCCTAA--------------------CT------------------------------------CGCTG---------CG-CCGTCTTTTACCGTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTGGTTAT-CCCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCCAGACGTATT--CAT------------------------------------CT---------------------TAAGCTT----ACCATG----CC---------------------T-CCCTCAG-----------AT--------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................221937057.00937057396310941801214841797938145415502187191818202832880769521361700520177514401258261714821997267028752285338017734530786536386714498119812918205599045707197654352020125151561910221391462715311012749352418557035532578658956800622605334483377216302183473146421889189209497592748110911132778
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................231564088.005640881718524113324676505711822287231511768269623762984220210712181223365370312404300561188020601877148624401214636111143736468232484225610781044544820598043691518221715181420383369461632161249311759838118924003961364738299800105267928298562838319772130923275416604696460617572405760268151
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................................................................................................................211244896.00244896387501353253228097141093413541252680347819157653144836431210121430324611092492722243172714232323168623972842111026202197107326622014256921298846502102431243617436445982372519252186356421123166581783690312038154816367992275953618914733163951874622393
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................241136259.0013625947212943321523489211884286295210237349636663263826320710622974387033656071822837117396111371133200413333210200256920188537311521657293909285231431202163921091850343525091223472226127043
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGC....................................................................................................................................................................20171545.007154525831789882203434826331031120988114979323282902642603932062164720430368641527442711358770558397568661949646481330374634366112031427221412528801351818483288902267852851739829072135222054226398163517833
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA..............................................................................................................................................................26149367.004936700131820002012613220010000002109224000012011161002030369260222010871655322310183010852926113059155224028711511221319798999158582949511175
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................24138876.00388761086652440436304111012412465306393231217261152331272295012015610573125503874202683901741655613338616785350542103350231401365343509422804833635175385113755359919792022338326174022882276323662827
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................................................................................................................22110656.001065610077426123638104510314941566641234968941456518365243715361549228126608265122101000000001000000009022483946614191442454403417343217401492471595745
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGC................................................................................................................................................................2418910.00891011415771070310542122032743201221632625121684414501100000000000200000211173724291268132121143357291107961872182016531793
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................2218795.008795100840231214030105401041524250363921111719179813226664449031214280119241679189432008249410100001101000100001852993406344665746207392741182423153416394516551
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCT.................................................................................................................................................................................................................2317024.00702429271900113981351586883136411212321125612510786356132156785680177592191618218951154474134380211000010031113232452439444922876124456191205136742501891716183756
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA...............................................................................................................................................................2516088.00608810840000403266361011000003113921000180142111139100110100110010000000305016634545722468882138723318911049419511170
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCAA................................................................................................................................................................2413949.0039490023141040401248060000000031232214111010210803158374130140000000000000000000010506420244319772315101261181560516449541
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................................................................................................................2313906.003906121879030931341153139911716102766145141724101123102110233038261791330000000001100000001269260121202492811044224118262587346407386393
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCG.....................................................................................................................................................................1913853.0038533060047167336312475184441023126111814821015675037794214524294268628052516562416310000000001001100101028220682515719059272120716842724895117
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................2313615.003615001901696121318168171515326131340161743928221718292250165955939191122112216200100000000000102209122155910291521766661315310346370362312345
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................................................................................................................2313199.00319956858930510377430844768232133733226392531418108335054011201153012471537291141262364834682992614453571245373243
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCTA................................................................................................................................................................2412655.00265520161410608095810013210011531614912801024911145914712000000000000000000001090101271638853543347445259305295326449
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................2111980.0019801012473100109041120300102223211213102430416000000000000000000000010125600182152829111932219867679118
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAAA.............................................................................................................................................................2711880.001880002200003001355100000000012121000060662743001020000000000000004010171471887013136261039424329269366
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAA..............................................................................................................................................................2611380.00138000430000300550200000100010541001111011522113000100000100001000001000121056535134311620301944274196162224
........................................................................................................................................CGCGCTAATCAGTGACCGGGGC..................................................................................................................................................................................................................2211316.00131639109416611139951233215712171610289165119214212191423231051451100010000011015711456292125251021247811112710758111715
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCG...................................................................................................................................................................2011144.0011440010121701321027420001100001222102241012220000000000000000000002218010122033430046106
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................2211137.0011370275612000101023010011030201012711143100310001000000000000000000392902232251725162721029352348
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................2111008.00100841473561229309231534115510274122841219983426534038141775359530000000000000000000620164121123222925101612103167108
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................................................................................................................201987.00987407116871088131818794111213126314926135148243125332120177382513300000000000000000001391360102674131261410152071521
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAAA................................................................................................................................................................241968.009680015600103002161000000000140700000403527960000000000000000000000304118419564320110397568109109
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCAAA...............................................................................................................................................................251927.0092700630000000323000000000108282000014054691710000000000000000000000004654771523001713148146125160
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCA...................................................................................................................................................................211842.00842002481112454116201010010014552221045031411601000000000000000000010150220179169571000204231395555
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGG................................................................................................................................................................241792.00792211184000000013111010010011000000322001630000100000000101100002349516181469493733403618819676110
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................................................................................................................251782.007821115101408162923061441311275122123211416191382130001000010010000000102441361014189474135215316548475057
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAA.................................................................................................................................................................231751.007510012700200011130000000000350210001605520810000000000000000000010210211301444001003139563277110
........................................................................................................................................................................................TCAGGTACCTGAAGTAGC......................................................................................................................................................................181713.00713006432617494029490515627322321328813121132312259171471152990000000001000000000001211071314522313211561725
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCG...................................................................................................................................................................191691.006910054288631301822117585011327011695578761013615191513710000000000000000000020417401057320000023105
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGG..................................................................................................................................................................221668.006683981330012020050000010201011002201015241100000000000000100000002401612115762377010796133142
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAT...............................................................................................................................................................251650.00650202100000000310010030000100001011240314410000000000000000000000354224301627381515222213818691102
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCTAA...............................................................................................................................................................251598.00598001300100003500000000000002000007043136100000000000000000000000002536218100000151151019785
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCTC................................................................................................................................................................................................................241529.00529139401611410010000100233194130001555804000012000000000000000013101741100031503221515300020
........................................................................................................................................CGCGCTAATCAGTGACCGGGG...................................................................................................................................................................................................................211529.005294095884841013100328868641410143105229122492337733109400000000000000000004739041121091010010301251
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTAA.............................................................................................................................................................271404.00404001100000009192000000000012200000302654400000000000110000000300074181817992152858644967
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCCA................................................................................................................................................................241395.0039500430000200170620113124002550202150611161510000000000000000000010802117148354113162324318181422
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGATA..............................................................................................................................................................261392.00392002000000002900000000000011100004002510000000000000001000000000101820131537157770556873
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGA....................................................................................................................................................................201380.00380001111000111031000000000120501125212312410000000000000000000113000131130000005652290113
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTA..............................................................................................................................................................261351.0035100331212501105140100013000202222004045734000000000000000000002054109642710215196629202725
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA...............................................................................................................................................................251348.00348105400222005111110001102200200003612310800000000000000000100010161201778101697915637392942
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTC...............................................................................................................................................................251313.003131261230300050101011225191020000178920180100030000000000100000001021441222412122136301400822
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCAA..................................................................................................................................................................221304.00304001361010100010000000020039576000010086251120000000000000000000020307022265020000423153435
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCAC................................................................................................................................................................241301.003010011102000011000000000000000000020003020000000000000000000000102034303340013458473859
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGC....................................................................................................................................................................191286.002860023800000211010000000000000000001100000000000000000000000000011300230001031355310
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAT..............................................................................................................................................................261259.0025900020000000020000000000000000000000120000101010010000000000100010172010330012554453353
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAC...............................................................................................................................................................251256.0025601050000000030000000000100100000000000000000000000000000010000320137310116655446384540
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGC..................................................................................................................................................................191234.002340019033220162717647200102170341020173842100220000000000000000000000810010100000002251
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................................................................................................................211225.00225101151140322103100010011000000011210421202101000100010000100001332600017101082217033025
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT..............................................................................................................................................................261222.00222008700010007142110001010220108158703003200000001000100000000020761159735143053310121011
............................................................................................................................................................................................GTACCTGAAGTAGCGCGC..................................................................................................................................................................181205.00205107110619182919517101100019103001021040110011220000000000000000000011220011010000002002
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCTT................................................................................................................................................................................................................241204.0020430292513430000087043686112412356150102000000000000000000000000116021011015713900525
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCT...................................................................................................................................................................211201.00201001414003301112100000071011100110010331001000000000010000000012012000293412010002567108
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTT.................................................................................................................................................................231197.0019700224011423204010010270110011181554210112030000000000000000000013802048400001029198
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCTC................................................................................................................................................................241156.0015624430010000000101100310000005727030000010000000000100000000102000434412118186468810
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGCAA..............................................................................................................................................................261156.001560000000000024000000000000010000010004100000000000000000000000003013198010000153031815
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGACA..............................................................................................................................................................261147.0014700000000000020000000000000000000000110200000000000000000000100000010116001010518272725
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCTG................................................................................................................................................................241136.001363002000001000000000000011000000000011000000000000000000000020100079711210415541191316
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................231134.00134001210000000010000000000000100000000100000000000000000000000000001450740030225212422
........................................................................................................................................CGCGCTAATCAGTGACCGGG....................................................................................................................................................................................................................201126.00126102712001312000140230113201432528112532010000000000000000000223100212013100020200
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGC....................................................................................................................................................................181115.0011500902346473081110110200521113321144532210000000000000000000201400011000000012000
.........................................................................................................................................GCGCTAATCAGTGACCGGGGCT.................................................................................................................................................................................................................221114.0011410661221121000031000001100201111100000000000000000000000001011632500001102001000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTA.................................................................................................................................................................231111.0011100830002260030000000302102005609022123000000000000000000000001700064200000022448
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTAA................................................................................................................................................................241110.0011010220000000110000000001100212001312116210000000000000000000020400011134010000661462
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................231103.0010310291000000000000010000000000010202010010000000000000000000000270102169618507513
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTC.................................................................................................................................................................231101.0010141111080000000001000050110100569707000001000000000000000000000900011013604021121
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCC.....................................................................................................................................................................191100.00100201010500090000010000921003008921606000105000000010000000102000100010100201000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTC..............................................................................................................................................................26198.00981022010000000011000020000000128603020001000000000000020001000280033362211024889
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAC..............................................................................................................................................................26197.009700040000000010000000000000000000000000000000000000000000000000000643121011226151911
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCTT..................................................................................................................................................................22186.008620210001040000000000300100100003001110010000000000000000000000000149173316014258
.............................................................................................................................................................................................TACCTGAAGTAGCGCGCG.................................................................................................................................................................18182.00820050012355476310200151030010021004000000000000000000000000001042011010101021023
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCC.................................................................................................................................................................................................................23181.00812613236000000000000000000000000100000000000000000000000000000000200000000010000000
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................23180.008010180010000000000010000000000000000000000000000000000000000000100033000010001910616
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCTA..................................................................................................................................................................22179.00790023101001014100000010012012100040111021000000000000000000010100011123000010221310
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCCC................................................................................................................................................................24177.0077101000000000200000000000000001110000000000000000000000010002000002404122711601576
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGCA...............................................................................................................................................................25175.00750011000000002000000000011000000010025320000000000000000000000000025003000021211813
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCTA................................................................................................................................................................................................................24173.00730010002012001040112101302053100200034220000000000000000001000502300031210321104
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................22172.007200200000100470200112011221100000110041100000000000000000000102020110301022312114
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGT....................................................................................................................................................................20167.00670089010212003000000020010000103300140001000000000000000000011500053200000013112
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTTA................................................................................................................................................................24165.00650000000103004002010030101011261240114101000000000000000000010900023000000002124
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGCG.................................................................................................................................................................20164.00641081110424120210230120011010251300111000000000000000000000002900000000000000000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGAA.....................................................................................................................................................................19164.00640000000000000000000000000000000000000000000000000000000000000000015182000000155414
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................21161.006100561000000000000000000000000000100000010000000000000000000000100010000000000000
droMoj3
GG------------------------T-------------------------CCG--CTGCGCC---------------------------------------C--------------GT-CCGTCTTTTACCGTGCGCGCTAATCAGTGACCGGGGCTGG-----TTTCGATTAT-CTCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCTAGACGCATT--CAA------------------------------------CGCTCTGCTAGCA--------------ATT---------------CTA----------------GCATTCTACGCC-----------AG----ATGGCAAT--SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................22169767.006976713999171410461455431958358
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................23148251.004825110316969242334121804113090
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................................................................................................................21139068.0039068129991965273359178935579
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGC....................................................................................................................................................................20111927.001192736342968713762381535
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................................................................................................................2213794.0037941669254971679176
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................2413503.00350359515426412394293
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................2412994.0029944085550651711705
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................2211507.001507478421124701251
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCT.................................................................................................................................................................................................................2311437.001437607218210679542
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCG.....................................................................................................................................................................1911195.0011956387914375152
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................2311075.001075196104048647134
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................2111057.0010578984201485
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCG...................................................................................................................................................................201889.008897790011063
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................221748.00748652252807
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGC................................................................................................................................................................241642.0064273761152619
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................................................................................................................231588.0058880322938184
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................................................................................................................231491.00491544112136932
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGC....................................................................................................................................................................191288.00288268000173
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................................................................................................................211229.0022933222127
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCAA................................................................................................................................................................241167.00167958125011
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................................................................................................................251166.00166133355587
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAAA................................................................................................................................................................241161.001611124002718
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................................................................................................................201151.00151651012114310
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................211140.0014048722301419
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCA...................................................................................................................................................................211124.00124347116615
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGA..................................................................................................................................................................211116.0011610800080
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAA.................................................................................................................................................................231103.0010352201417
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA..............................................................................................................................................................26197.009734300573
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGG................................................................................................................................................................24186.008614331605
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCT...................................................................................................................................................................21186.008616210598
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCG...................................................................................................................................................................19185.00853212222710
........................................................................................................................................CGCGCTAATCAGTGACCGGGGC..................................................................................................................................................................................................................22185.0085413721616
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAT...............................................................................................................................................................25184.00845300724
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCTA................................................................................................................................................................24181.00811411024212
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAA...............................................................................................................................................................25176.007612500563
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCCA................................................................................................................................................................24172.0072126133911
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCAA..................................................................................................................................................................22170.007049100182
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGG..................................................................................................................................................................22170.007034211293
........................................................................................................................................................................................TCAGGTACCTGAAGTAGC......................................................................................................................................................................18168.006826068271
........................................................................................................................................CGCGCTAATCAGTGACCGGGG...................................................................................................................................................................................................................21161.00614205635
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT..............................................................................................................................................................26159.0059141032417
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTT.................................................................................................................................................................23158.0058100403014
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................23153.005339000131
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCG.....................................................................................................................................................................18144.00443900041
........................................................................................................................................CGCGCTAATCAGTGACCGGG....................................................................................................................................................................................................................20143.00433502114
.........................................................................................................................................GCGCTAATCAGTGACCGGGGCT.................................................................................................................................................................................................................22142.00423710202
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................21135.00352800070
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGA....................................................................................................................................................................20133.003315200124
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTC...............................................................................................................................................................25132.00327021715
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGT....................................................................................................................................................................20129.00292100251
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCTT................................................................................................................................................................................................................24129.00291801244
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................23126.00261900070
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGC..................................................................................................................................................................19126.00261210094
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGC....................................................................................................................................................................18125.00251430152
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCTC................................................................................................................................................................24120.0020512084
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCC.................................................................................................................................................................................................................23120.00200000191
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA...............................................................................................................................................................25120.0020410069
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAC...............................................................................................................................................................25119.00190000190
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGCG.................................................................................................................................................................20118.0018800082
........................................................................................................................................CGCGCTAATCAGTGACCGG.....................................................................................................................................................................................................................19118.00181600101
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCAAA...............................................................................................................................................................25117.00171010042
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTAA................................................................................................................................................................24117.00171400030
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGAC.................................................................................................................................................................23116.00160000160
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTAA..............................................................................................................................................................26115.0015800070
............................................................................................................................................................................................GTACCTGAAGTAGCGCGC..................................................................................................................................................................18115.0015800133
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCAC................................................................................................................................................................24115.00151000140
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................22114.0014301154
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGA..................................................................................................................................................................20114.0014730022
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCG...................................................................................................................................................................18114.0014600071
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................22114.00141400000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGATT..............................................................................................................................................................26113.0013210091
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGCAA..............................................................................................................................................................26112.0012700041
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCTA..................................................................................................................................................................22112.0012400062
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTA..............................................................................................................................................................26112.0012220062
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCTAT...............................................................................................................................................................25112.00121100100
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................23111.00111100000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGCT...............................................................................................................................................................25111.0011100181
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGAAA................................................................................................................................................................23111.00111100000
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTA.................................................................................................................................................................23110.0010210061
droGri2
GC---CT-------------------CTCTCTTTCTT---------------------------------------------------------------------------------CG-TCGTCGTTTACCGCGCGCGCTAATCAGTGACCGGGGCTGG-----TTTTGATTAT-CCCACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCCAGACGCATT--CAA----------------------------------------------------------------------------------------CAAA-C---GGCGCCT-GCTCAGC-----------AA----ACATCG-G--SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................2315759.00575914314328
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................2213179.00317913071872
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCG...................................................................................................................................................................2111779.0017797131066
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCT.................................................................................................................................................................................................................231774.00774341433
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGC....................................................................................................................................................................201479.00479268211
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................241256.0025698158
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................231145.0014530115
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................221109.001091072
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................21193.0093930
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCG.....................................................................................................................................................................19191.00915239
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGT..................................................................................................................................................................22189.00892663
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCG...................................................................................................................................................................20162.0062611
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCC.................................................................................................................................................................23153.0053647
........................................................................................................................................CGCGCTAATCAGTGACCGGGGC..................................................................................................................................................................................................................22150.0050446
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................21145.0045639
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCA.................................................................................................................................................................23142.0042537
.........................................................................................................................................GCGCTAATCAGTGACCGGGGCT.................................................................................................................................................................................................................22129.0029272
........................................................................................................................................................................................TCAGGTACCTGAAGTAGC......................................................................................................................................................................18128.0028280
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGC....................................................................................................................................................................19123.0023230
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGC..................................................................................................................................................................20120.0020812
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGA................................................................................................................................................................24117.001798
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTT...............................................................................................................................................................25117.0017611
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCG...................................................................................................................................................................19114.0014410
........................................................................................................................................CGCGCTAATCAGTGACCGGGG...................................................................................................................................................................................................................21111.0011101
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGA..................................................................................................................................................................22110.001064
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCT...................................................................................................................................................................2117.00734
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCC.................................................................................................................................................................................................................2316.00606
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCA.................................................................................................................................................................................................................2316.00624
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCTT................................................................................................................................................................................................................2416.00633
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCG.....................................................................................................................................................................1815.00550
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTTT..............................................................................................................................................................2615.00532
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGC................................................................................................................................................................2415.00523
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCC...................................................................................................................................................................2114.00413
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCGT................................................................................................................................................................2314.00440
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCT.................................................................................................................................................................2214.00440
.........................................................................................................................................GCGCTAATCAGTGACCGGGGC..................................................................................................................................................................................................................2113.00330
..........................................................................................................................................CGCTAATCAGTGACCGGGGC..................................................................................................................................................................................................................2012.00220
........................................................................................................................................CGCGCTAATCAGTGACCGG.....................................................................................................................................................................................................................1912.00220
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCG.................................................................................................................................................................................................................2312.00202
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGC....................................................................................................................................................................1812.00211
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGCG.................................................................................................................................................................2412.00220
..........................................................................................................................................CGCTAATCAGTGACCGGGGCT.................................................................................................................................................................................................................2112.00211
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCC.....................................................................................................................................................................1911.00101
........................................................................................................................................CGCGCTAATCAGTGACCG......................................................................................................................................................................................................................1811.00110
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTT.................................................................................................................................................................2311.00110
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCG...................................................................................................................................................................1811.00110
..........................................................................................................................................................................................AGGTACCTGAAGTAGCGCGCC.................................................................................................................................................................2111.00101
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCTGG-----..........................................................................................................................................................................................................2511.00110
............................................................................................................................................................................................GTACCTGAAGTAGCGCGCG.................................................................................................................................................................1911.00110
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTA...............................................................................................................................................................2511.00110
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCGC..................................................................................................................................................................2311.00110
........................................................................................................................................CGCGCTAATCAGTGACCGGGGCTG................................................................................................................................................................................................................2411.00110
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGT....................................................................................................................................................................2011.00110
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCCG....................................................................................................................................................................2011.00101
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCTT..................................................................................................................................................................2211.00110
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCA...................................................................................................................................................................2111.00101
.............................................................................................................................................................................................TACCTGAAGTAGCGCGCG.................................................................................................................................................................1811.00101
................................................................................................................................................................G-----TTTTGATTAT-CCCACAGGT......................................................................................................................................................................................2011.00110
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGTC.................................................................................................................................................................2311.00110
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGAAA..............................................................................................................................................................2611.00110
.........................................................................................................................................................................................CAGGTACCTGAAGTAGCGCGCA.................................................................................................................................................................2211.00110
........................................................................................................................................CGCGCTAATCAGTGACCGGG....................................................................................................................................................................................................................2011.00110
.......................................................................................................................................................................................GTCAGGTACCTGAAGTAGCGCG...................................................................................................................................................................2211.00110
...........................................................................................................................................................................................GGTACCTGAAGTAGCGCGCG.................................................................................................................................................................2011.00101
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCA.....................................................................................................................................................................1911.00110
........................................................................................................................................................................................TCAGGTACCTGAAGTAGCGCGCGTG...............................................................................................................................................................2511.00110
......................................................................................................................................................................................AGTCAGGTACCTGAAGTAGCGCG...................................................................................................................................................................2311.00110

Generated: 10/20/2015 at 07:31 PM