ID:

dan-mir-274

 Coordinate:

scaffold_13337:5918622-5918717 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

antisense_to_intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.6 -35.0 -35.0

Flybase annnotation

Antisense to intron [Dana\GF24527-in]; utr5 [utr5_plus_7681]; pre_miRNA [Dana\mir-274-RM]; miRNA [Dana\miR-274-RA]

No Repeatable elements found

Sense Strand Reads

TTATACTTTTATTGTTTCGGAGTGAAGTGCCTTTTTTTAAAAAACAGAAATGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTATTTTACAGGACATACAGGATTACTCGTTTTTGCGATCACAAATCCTGAAATTGCAGCAAAAAACAGCAAAGAAAACATTGTATTTGGTGTGAATTATTTTTATTAAATT

*************************************************.(((((((((((((.(((((((.((.((..((((((((.(((............))).))))))))..)))).)))))))...))))))))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total V106

head

 V055

head

 M044

female body

 V105

male body		 V039

embryo

 M058

embryo
................................................................TTTGTGACCGACACTAACGGGT.............................................................................................................. 22 0 1 187009.00 187009 127525 44408 11553 3515 6 2
................................................................TTTGTGACCGACACTAACGGGTA............................................................................................................. 23 0 1 19217.00 19217 7680 3390 7978 169 0 0
................................................................TTTGTGACCGACACTAACGGG............................................................................................................... 21 0 1 4206.00 4206 1399 666 2100 41 0 0
................................................................TTTGTGACCGACACTAACGG................................................................................................................ 20 0 1 3038.00 3038 2236 389 387 26 0 0
................................................................TTTGTGACCGACACTAACGGGA.............................................................................................................. 22 1 1 2281.00 2281 1468 660 106 47 0 0
................................................................TTTGTGACCGACACTAACGGGC.............................................................................................................. 22 1 1 1610.00 1610 433 1127 43 7 0 0
................................................................TTTGTGACCGACACTAACGGGTAA............................................................................................................ 24 1 1 1484.00 1484 999 366 103 16 0 0
................................................................TTTGTGACCGACACTAACGGGTAT............................................................................................................ 24 0 1 1398.00 1398 606 559 202 30 1 0
................................................................TTTGTGACCGACACTAACG................................................................................................................. 19 0 1 1302.00 1302 515 606 177 4 0 0
................................................................TTTGTGACCGACACTAACGGT............................................................................................................... 21 1 1 1251.00 1251 1137 89 21 4 0 0
.................................................................TTGTGACCGACACTAACGGGT.............................................................................................................. 21 0 1 1244.00 1244 105 100 1031 8 0 0
................................................................TTTGTGACCGACACTAACTGGT.............................................................................................................. 22 1 1 1130.00 1130 1028 80 6 16 0 0
................................................................TTGGTGACCGACACTAACGGGT.............................................................................................................. 22 1 1 989.00 989 857 131 1 0 0 0
................................................................TTTGTGACCGACACTAACGGAT.............................................................................................................. 22 1 1 870.00 870 797 30 1 42 0 0
................................................................TTTGTGACCGACACTAACGGGTT............................................................................................................. 23 1 1 806.00 806 398 268 133 7 0 0
................................................................TTTGTGACCGACACTAACGGGG.............................................................................................................. 22 1 1 725.00 725 270 412 39 4 0 0
................................................................TTTGTGACAGACACTAACGGGT.............................................................................................................. 22 1 1 696.00 696 323 175 188 10 0 0
.................................................................TTGTGACCGACACTAACGGGTA............................................................................................................. 22 0 1 679.00 679 8 7 664 0 0 0
................................................................TTTGTGACCGACACTAACGTGT.............................................................................................................. 22 1 1 651.00 651 518 121 2 10 0 0
................................................................TTTGTTACCGACACTAACGGGT.............................................................................................................. 22 1 1 621.00 621 551 56 11 3 0 0
................................................................TTTGTGACCGACACTAACGGCT.............................................................................................................. 22 1 1 608.00 608 422 162 1 23 0 0
................................................................TTTGTGACCTACACTAACGGGT.............................................................................................................. 22 1 1 552.00 552 462 76 11 3 0 0
................................................................TTTGTGACGGACACTAACGGGT.............................................................................................................. 22 1 1 492.00 492 40 28 423 1 0 0
................................................................TTTGTGACTGACACTAACGGGT.............................................................................................................. 22 1 1 439.00 439 228 114 94 3 0 0
................................................................TTTGTGACCGACACTAACGT................................................................................................................ 20 1 1 433.00 433 295 99 5 34 0 0
................................................................TTTGTGACCGACACTAACGGTT.............................................................................................................. 22 1 1 406.00 406 301 79 4 22 0 0
................................................................TTTGTGACCGACACTAACGGGTTT............................................................................................................ 24 1 1 404.00 404 225 143 29 7 0 0
................................................................TTTGGGACCGACACTAACGGGT.............................................................................................................. 22 1 1 347.00 347 8 336 2 1 0 0
................................................................TTTGCGACCGACACTAACGGGT.............................................................................................................. 22 1 1 303.00 303 140 146 13 4 0 0
................................................................CTTGTGACCGACACTAACGGGT.............................................................................................................. 22 1 1 280.00 280 186 83 9 2 0 0
................................................................TTTGTGACGGACACTAACGGGTA............................................................................................................. 23 1 1 279.00 279 2 0 277 0 0 0
................................................................TTTGTGACCGACACTACCGGGT.............................................................................................................. 22 1 1 271.00 271 30 239 0 2 0 0
................................................................TTTGTGACCGACGCTAACGGGT.............................................................................................................. 22 1 1 255.00 255 128 112 6 9 0 0
.............................................................................................................CTCGTTTTTGCGATCACAAATC................................................................. 22 0 1 240.00 240 219 8 10 3 0 0
................................................................TTTGTGACCGACACTAACAGGT.............................................................................................................. 22 1 1 239.00 239 160 73 3 3 0 0
................................................................TTTGTGGCCGACACTAACGGGT.............................................................................................................. 22 1 1 217.00 217 147 59 10 1 0 0
................................................................TTTGTGACCGGCACTAACGGGT.............................................................................................................. 22 1 1 209.00 209 105 95 5 4 0 0
................................................................TTTGTGACCGACACTAGCGGGT.............................................................................................................. 22 1 1 208.00 208 117 80 7 4 0 0
................................................................TTTGTGATCGACACTAACGGGT.............................................................................................................. 22 1 1 200.00 200 152 40 3 5 0 0
................................................................TTTGTGACCGACACTAACGCGT.............................................................................................................. 22 1 1 185.00 185 53 130 1 1 0 0
................................................................TTTGTGACCGCCACTAACGGGT.............................................................................................................. 22 1 1 184.00 184 41 136 0 6 0 1
................................................................TTTGTGACCGACACTGACGGGT.............................................................................................................. 22 1 1 184.00 184 103 69 4 8 0 0
................................................................TTTGTGACCGACACTAATGGGT.............................................................................................................. 22 1 1 181.00 181 126 52 2 1 0 0
................................................................TTTGTGACCGACACTAACGAGT.............................................................................................................. 22 1 1 178.00 178 126 44 5 3 0 0
................................................................TTTGTGACCGACACTCACGGGT.............................................................................................................. 22 1 1 178.00 178 25 146 0 7 0 0
................................................................TTCGTGACCGACACTAACGGGT.............................................................................................................. 22 1 1 176.00 176 132 38 1 5 0 0
.................................................................TTGTGACCGACACTAACGGG............................................................................................................... 20 0 1 172.00 172 1 2 169 0 0 0
................................................................TTTGTGACCGACAATAACGGGT.............................................................................................................. 22 1 1 171.00 171 73 93 0 5 0 0
................................................................TTTGTGACCGACACTAACCGGT.............................................................................................................. 22 1 1 165.00 165 46 118 1 0 0 0
................................................................TTTGTGACCGATACTAACGGGT.............................................................................................................. 22 1 1 163.00 163 103 49 2 9 0 0
................................................................TTTGTGACCGAAACTAACGGGT.............................................................................................................. 22 1 1 159.00 159 108 37 2 12 0 0
................................................................TGTGTGACCGACACTAACGGGT.............................................................................................................. 22 1 1 159.00 159 5 139 2 12 0 1
................................................................TTTGTGAACGACACTAACGGGT.............................................................................................................. 22 1 1 159.00 159 78 79 0 2 0 0
................................................................TTTGTGACCAACACTAACGGGT.............................................................................................................. 22 1 1 155.00 155 103 48 2 2 0 0
................................................................TTTGAGACCGACACTAACGGGT.............................................................................................................. 22 1 1 153.00 153 24 127 1 1 0 0
................................................................TTTGTGACAGACACTAACGGGTA............................................................................................................. 23 1 1 152.00 152 18 13 120 1 0 0
................................................................TCTGTGACCGACACTAACGGGT.............................................................................................................. 22 1 1 151.00 151 96 42 5 8 0 0
................................................................TTTGTGACCGACTCTAACGGGT.............................................................................................................. 22 1 1 141.00 141 16 121 0 4 0 0
................................................................GTTGTGACCGACACTAACGGGT.............................................................................................................. 22 1 1 140.00 140 15 82 42 1 0 0
................................................................TTTGTGACCGACACCAACGGGT.............................................................................................................. 22 1 1 129.00 129 79 46 0 4 0 0
................................................................TTTGTCACCGACACTAACGGGT.............................................................................................................. 22 1 1 129.00 129 60 66 2 1 0 0
................................................................TTTGTGACCGACCCTAACGGGT.............................................................................................................. 22 1 1 129.00 129 21 99 0 9 0 0
................................................................TTTTTGACCGACACTAACGGGT.............................................................................................................. 22 1 1 126.00 126 80 25 16 5 0 0
................................................................TTTGTGACCGACACTAAAGGGT.............................................................................................................. 22 1 1 124.00 124 70 51 0 3 0 0
................................................................TTTGTGACCGTCACTAACGGGT.............................................................................................................. 22 1 1 118.00 118 26 88 2 2 0 0
...............................................................CTTTGTGACCGACACTAACGGGT.............................................................................................................. 23 1 1 116.00 116 24 55 34 3 0 0
................................................................TTTGTAACCGACACTAACGGGT.............................................................................................................. 22 1 1 111.00 111 71 33 5 2 0 0
................................................................TTTGTGACCCACACTAACGGGT.............................................................................................................. 22 1 1 104.00 104 45 51 3 5 0 0
................................................................TTTATGACCGACACTAACGGGT.............................................................................................................. 22 1 1 103.00 103 65 33 1 4 0 0
................................................................TTTGTGACCGACACTATCGGGT.............................................................................................................. 22 1 1 102.00 102 37 63 2 0 0 0
..................................................................TGTGACCGACACTAACGGGT.............................................................................................................. 20 0 1 95.00 95 19 14 62 0 0 0
................................................................TTTGTGACCGACACTAACGGGTATT........................................................................................................... 25 0 1 94.00 94 50 28 12 4 0 0
................................................................TTTGTGACCGAGACTAACGGGT.............................................................................................................. 22 1 1 92.00 92 35 34 0 23 0 0
................................................................TTTGTGACCGACACTAACGGGCA............................................................................................................. 23 1 1 90.00 90 21 48 20 1 0 0
................................................................ATTGTGACCGACACTAACGGGT.............................................................................................................. 22 1 1 90.00 90 19 62 8 1 0 0
................................................................TTTGTGACCGACATTAACGGGT.............................................................................................................. 22 1 1 89.00 89 43 42 1 3 0 0
................................................................TTTGTGACCGACACTAACGGGTC............................................................................................................. 23 1 1 88.00 88 21 58 9 0 0 0
................................................................TTTGTGACTGACACTAACGGGTA............................................................................................................. 23 1 1 84.00 84 11 12 61 0 0 0
................................................................TTTGTGACCGACACTAACGGGTAC............................................................................................................ 24 1 1 83.00 83 11 15 57 0 0 0
................................................................TTTGTGACGGACACTAACGGG............................................................................................................... 21 1 1 82.00 82 0 4 78 0 0 0
................................................................TTTGTGACCGACACTAACGGGTAG............................................................................................................ 24 1 1 81.00 81 48 13 20 0 0 0
.............................................................................................................CTCGTTTTTGCGATCACAAATCCT............................................................... 24 0 1 74.00 74 36 10 26 2 0 0
................................................................TTGGTGACCGACACTAACGGGTA............................................................................................................. 23 1 1 74.00 74 67 7 0 0 0 0
..................................................................TTTGACCGACACTAACGGGT.............................................................................................................. 20 1 1 72.00 72 61 0 6 5 0 0
................................................................TTTGTGACCGACACTAACGGA............................................................................................................... 21 1 1 71.00 71 48 22 1 0 0 0
................................................................TTTCTGACCGACACTAACGGGT.............................................................................................................. 22 1 1 71.00 71 19 49 1 2 0 0
................................................................TTTGTGAGCGACACTAACGGGT.............................................................................................................. 22 1 1 69.00 69 28 41 0 0 0 0
.............................................................................................................CTCGTTTTTGCGATCACAAATCC................................................................ 23 0 1 68.00 68 41 7 20 0 0 0
................................................................TTTGTGACCGACACGAACGGGT.............................................................................................................. 22 1 1 66.00 66 8 58 0 0 0 0
................................................................TTTGTGACCGACACTAACGGGAA............................................................................................................. 23 1 1 63.00 63 17 19 27 0 0 0
................................................................TTTGTGTCCGACACTAACGGGT.............................................................................................................. 22 1 1 63.00 63 37 25 1 0 0 0
................................................................TTTGTGACCGACACTAAGGGGT.............................................................................................................. 22 1 1 58.00 58 34 23 0 1 0 0
................................................................TTTGTGACCTACACTAACGGGTA............................................................................................................. 23 1 1 58.00 58 36 5 14 3 0 0
................................................................TTTGTGACCGACACTAACGGATA............................................................................................................. 23 1 1 56.00 56 50 4 0 2 0 0
................................................................TTTGTGACCGACACTAACTGGTA............................................................................................................. 23 1 1 56.00 56 51 4 1 0 0 0
................................................................TTTGTGACCGACACTAACGTGTA............................................................................................................. 23 1 1 56.00 56 40 10 6 0 0 0
................................................................TTTGTGACCGACACTAACGGTTA............................................................................................................. 23 1 1 54.00 54 29 9 13 3 0 0
................................................................TTTGTTACCGACACTAACGGGTA............................................................................................................. 23 1 1 54.00 54 37 5 12 0 0 0
................................................................TTTGTGACCGACACTAACGGGGA............................................................................................................. 23 1 1 52.00 52 5 22 25 0 0 0
................................................................TTTGGGACCGACACTAACGGGC.............................................................................................................. 22 2 1 47.00 47 0 47 0 0 0 0
................................................................TTTGTGACCGACACTTACGGGT.............................................................................................................. 22 1 1 44.00 44 9 31 0 4 0 0
................................................................TATGTGACCGACACTAACGGGT.............................................................................................................. 22 1 1 43.00 43 9 27 1 6 0 0
................................................................TTTGTGACAGACACTAACGGG............................................................................................................... 21 1 1 38.00 38 4 1 33 0 0 0
................................................................TTTGTGACCGACACTAACGGTA.............................................................................................................. 22 2 1 37.00 37 25 6 6 0 0 0
..................................................................TGTGACCGACACTAACGGGTA............................................................................................................. 21 0 1 37.00 37 0 1 36 0 0 0
................................................................TTTGTGCCCGACACTAACGGGT.............................................................................................................. 22 1 1 37.00 37 16 20 0 1 0 0
.................................................................TTGTGACCGACACTAACGG................................................................................................................ 19 0 1 36.00 36 0 1 35 0 0 0
................................................................TTTGTGACCGACACTAACGGCTA............................................................................................................. 23 1 1 35.00 35 25 8 0 2 0 0
................................................................TTTGGGACCGACACTAACGGGG.............................................................................................................. 22 2 1 34.00 34 0 33 1 0 0 0
................................................................TTTGTGACCGACTCTAACGGGC.............................................................................................................. 22 2 1 32.00 32 0 32 0 0 0 0
................................................................TTTGTGACCGACACTACCGGGC.............................................................................................................. 22 2 1 32.00 32 0 32 0 0 0 0
................................................................TTTGTGACCGACACTAACGGGTAAA........................................................................................................... 25 2 1 32.00 32 21 6 5 0 0 0
................................................................TTGGTGACCGACACTAACGGGC.............................................................................................................. 22 2 1 31.00 31 6 25 0 0 0 0
................................................................TTTGTGACCGACACTAACGGGTGT............................................................................................................ 24 1 1 30.00 30 22 5 0 3 0 0
................................................................TTAGTGACCGACACTAACGGGT.............................................................................................................. 22 1 1 30.00 30 4 26 0 0 0 0
................................................................TTTGTGACCGACACTAACGCGC.............................................................................................................. 22 2 1 30.00 30 0 30 0 0 0 0
.................................................................TTTTGACCGACACTAACGGGT.............................................................................................................. 21 1 1 30.00 30 21 0 5 4 0 0
................................................................TTTGCGACCGACACTAACGGGTA............................................................................................................. 23 1 1 29.00 29 15 5 9 0 0 0
................................................................TTTGTGACCGACAGTAACGGGT.............................................................................................................. 22 1 1 29.00 29 9 13 1 6 0 0
................................................................TTTGTGACTGACACTAACGGG............................................................................................................... 21 1 1 28.00 28 4 4 20 0 0 0
................................................................TTGGGGACCGACACTAACGGGT.............................................................................................................. 22 2 1 27.00 27 0 27 0 0 0 0
................................................................TTTGTGATCGACACTAACGGGTA............................................................................................................. 23 1 1 26.00 26 20 3 3 0 0 0
................................................................TTTGAGACCGACACTAACGGGC.............................................................................................................. 22 2 1 26.00 26 0 26 0 0 0 0
................................................................GTTGTGACCGACACTAACGGGTA............................................................................................................. 23 1 1 26.00 26 3 7 16 0 0 0
.................................................................TTGTGACCAACACTAACGGGT.............................................................................................................. 21 1 1 26.00 26 0 0 26 0 0 0
................................................................TTTGTGACCGCCACTAACGGGC.............................................................................................................. 22 2 1 26.00 26 0 26 0 0 0 0
................................................................TTTGTGACCGACACTAACGGGTG............................................................................................................. 23 1 1 26.00 26 9 8 9 0 0 0
................................................................TGTGTGACCGACACTAACGGGC.............................................................................................................. 22 2 1 25.00 25 0 25 0 0 0 0
................................................................TTTGTGACAGACACTAACGGGG.............................................................................................................. 22 2 1 25.00 25 1 17 7 0 0 0
................................................................TTTGGGACCGACACTAACGGGTA............................................................................................................. 23 1 1 25.00 25 0 25 0 0 0 0
................................................................TTTGTGACCGACGCTAACGGGTA............................................................................................................. 23 1 1 24.00 24 10 7 7 0 0 0
................................................................TGGGTGACCGACACTAACGGGT.............................................................................................................. 22 2 1 23.00 23 0 23 0 0 0 0
...................................................................TTGACCGACACTAACGGGT.............................................................................................................. 19 1 1 22.00 22 20 0 1 1 0 0
................................................................TTTGTGACCGACACTAACTG................................................................................................................ 20 1 1 22.00 22 20 2 0 0 0 0
................................................................CTTGTGACCGACACTAACGGGTA............................................................................................................. 23 1 1 22.00 22 13 3 6 0 0 0
................................................................TTTGTGACCGACACTACCGGGTA............................................................................................................. 23 1 1 22.00 22 1 21 0 0 0 0
...............................................................TTTTGTGACCGACACTAACGGGT.............................................................................................................. 23 0 1 21.00 21 3 4 14 0 0 0
................................................................TTTGTGACCGATACTAACGGGTA............................................................................................................. 23 1 1 21.00 21 12 6 3 0 0 0
................................................................TTTGTGACCGACACTAACTGG............................................................................................................... 21 1 1 21.00 21 12 5 3 1 0 0
................................................................TTTGTGACCTACACTAACTGGT.............................................................................................................. 22 2 1 20.00 20 12 8 0 0 0 0
................................................................TTTTTGACCGACACTAACGGGTA............................................................................................................. 23 1 1 20.00 20 7 2 11 0 0 0
................................................................TTTGAGACCGACACTAACGGGG.............................................................................................................. 22 2 1 20.00 20 0 20 0 0 0 0
...............................................................CTTTGTGACCGACACTAACGGGTA............................................................................................................. 24 1 1 20.00 20 0 5 15 0 0 0
................................................................TTTGTGACCGACACTAACGGGTTA............................................................................................................ 24 2 1 20.00 20 14 5 1 0 0 0
................................................................TTTGTGACCGACACTAACCGGC.............................................................................................................. 22 2 1 19.00 19 0 19 0 0 0 0
................................................................TTTGAGACCGACACTAACGGGTA............................................................................................................. 23 1 1 19.00 19 2 16 1 0 0 0
................................................................TTTGTCACCGACACTAACGGGTA............................................................................................................. 23 1 1 19.00 19 7 6 6 0 0 0
................................................................TTTGTGACCGACACTAATGGGTA............................................................................................................. 23 1 1 19.00 19 11 5 2 1 0 0
................................................................TTTGTGACCGACACTAACGGC............................................................................................................... 21 1 1 19.00 19 9 9 1 0 0 0
....................................................................TGACCGACACTAACGGGT.............................................................................................................. 18 0 1 19.00 19 16 0 3 0 0 0
................................................................TTTGTGACCGACACTAACGTGA.............................................................................................................. 22 2 1 18.00 18 13 5 0 0 0 0
................................................................ATTGTGACCGACACTAACGGGTA............................................................................................................. 23 1 1 18.00 18 3 5 10 0 0 0
................................................................TTTGTGACCGACACTAACGGTC.............................................................................................................. 22 2 1 18.00 18 2 16 0 0 0 0
................................................................TTTGTGGCCGACACTAACGGGTA............................................................................................................. 23 1 1 18.00 18 9 3 5 1 0 0
................................................................TCTGTGACCGACACTAACGGGTA............................................................................................................. 23 1 1 18.00 18 15 2 1 0 0 0
................................................................TTTGGGACCGACACTAACGGGA.............................................................................................................. 22 2 1 18.00 18 0 18 0 0 0 0
................................................................TTTGCGACCGACACTAACGGGC.............................................................................................................. 22 2 1 18.00 18 0 18 0 0 0 0
................................................................TTGGTGACCGACAATAACGGGT.............................................................................................................. 22 2 1 18.00 18 1 17 0 0 0 0
.................................................................TTGTGACCGACACTAACGGGTAT............................................................................................................ 23 0 1 18.00 18 0 2 16 0 0 0
................................................................TTTGTTACCGACACTAACTGGT.............................................................................................................. 22 2 1 17.00 17 14 3 0 0 0 0
................................................................TTTGTGACCGACACTAACGGGCAT............................................................................................................ 24 1 1 17.00 17 4 12 1 0 0 0
................................................................TTTGTGACCGACACTAACGCGG.............................................................................................................. 22 2 1 17.00 17 0 17 0 0 0 0
................................................................TTTGTGACCGACACTAACGGTG.............................................................................................................. 22 2 1 17.00 17 0 17 0 0 0 0
................................................................TTTGTGACCGACACTAACGCGTA............................................................................................................. 23 1 1 17.00 17 6 10 1 0 0 0
................................................................TTTGTGACCGACACTGACGGGTA............................................................................................................. 23 1 1 17.00 17 13 3 1 0 0 0
................................................................TTTGTGACCGACACTAACGGGTTTT........................................................................................................... 25 1 1 17.00 17 8 8 1 0 0 0
................................................................TTTGTGACCGACACTAACTGGC.............................................................................................................. 22 2 1 16.00 16 3 13 0 0 0 0
................................................................TGTGTGACCGACACTAACGGGG.............................................................................................................. 22 2 1 16.00 16 0 16 0 0 0 0
................................................................TTTGTGACCGACACTAGCGGGTA............................................................................................................. 23 1 1 16.00 16 7 4 5 0 0 0
................................................................TTTGTGACCGACACTAACAGGTA............................................................................................................. 23 1 1 16.00 16 3 11 2 0 0 0
................................................................TTTGTGACGGACACTAACGG................................................................................................................ 20 1 1 16.00 16 1 0 15 0 0 0
................................................................TTGGTGACCGACACTAACGGGA.............................................................................................................. 22 2 1 16.00 16 11 5 0 0 0 0
................................................................TTTGTGACCGACACTAAC.................................................................................................................. 18 0 1 16.00 16 7 8 1 0 0 0
.................................................................TTGTGACCGACACTAACGGGTAA............................................................................................................ 23 1 1 16.00 16 1 2 13 0 0 0
................................................................TTTGTGACGGACACTAACGGGC.............................................................................................................. 22 2 1 16.00 16 0 6 10 0 0 0
................................................................TTTGTGACCGACACTAACT................................................................................................................. 19 1 1 16.00 16 13 3 0 0 0 0
................................................................TTTGTGACAGACACTAACGGGC.............................................................................................................. 22 2 1 16.00 16 1 13 2 0 0 0
.................................................................TTGTGACCGACACTAACGGGTT............................................................................................................. 22 1 1 15.00 15 0 0 15 0 0 0
................................................................TTGGTGACCGACACTAACGG................................................................................................................ 20 1 1 15.00 15 13 2 0 0 0 0
................................................................TTTGGGACCGGCACTAACGGGT.............................................................................................................. 22 2 1 15.00 15 0 15 0 0 0 0
................................................................TTTGTGACCGACACTAACGTT............................................................................................................... 21 2 1 15.00 15 10 5 0 0 0 0
................................................................TTTGGGACAGACACTAACGGGT.............................................................................................................. 22 2 1 15.00 15 0 15 0 0 0 0
................................................................TTTGTGACAGACACTAACGGGA.............................................................................................................. 22 2 1 15.00 15 2 11 2 0 0 0
................................................................TTTGTGACAGACACTAACGG................................................................................................................ 20 1 1 15.00 15 6 3 6 0 0 0
................................................................TTTGTGACCGACACTAACGGGCT............................................................................................................. 23 2 1 15.00 15 1 13 1 0 0 0
................................................................TTTGTGACCGACCCTAACGGGC.............................................................................................................. 22 2 1 14.00 14 0 14 0 0 0 0
................................................................TTTGTGACCGACACTAACGGGTCT............................................................................................................ 24 1 1 14.00 14 4 10 0 0 0 0
................................................................TTTGTGACCGACACTCACGGGC.............................................................................................................. 22 2 1 14.00 14 0 14 0 0 0 0
................................................................TTCGTGACCGACACTAACGGGTA............................................................................................................. 23 1 1 14.00 14 7 5 2 0 0 0
................................................................TTTGTGACCTACACTAACGGG............................................................................................................... 21 1 1 14.00 14 9 2 3 0 0 0
...............................................................ATTTGTGACCGACACTAACGGGT.............................................................................................................. 23 1 1 14.00 14 1 3 10 0 0 0
................................................................TTTGTGACCGACAATAACGGGC.............................................................................................................. 22 2 1 14.00 14 0 13 0 1 0 0
................................................................TTTGTGACCAACACTAACGGGTA............................................................................................................. 23 1 1 14.00 14 8 3 2 1 0 0
................................................................TTTGTGACCGACACTAACTGGA.............................................................................................................. 22 2 1 14.00 14 12 2 0 0 0 0
................................................................TTTGTGACCGACACTAACGGCC.............................................................................................................. 22 2 1 14.00 14 0 14 0 0 0 0
................................................................TTGGTGACCGACACTAACGGG............................................................................................................... 21 1 1 13.00 13 10 3 0 0 0 0
................................................................TTTGTGACCGACACTAACGGGTACT........................................................................................................... 25 1 1 13.00 13 9 2 2 0 0 0
................................................................GTTGTGACCGACACTAACGGGG.............................................................................................................. 22 2 1 13.00 13 1 12 0 0 0 0
................................................................TTGGTGACCGACACTAACGGCT.............................................................................................................. 22 2 1 13.00 13 0 13 0 0 0 0
................................................................TTTGTGACCTACACTAACGG................................................................................................................ 20 1 1 13.00 13 12 0 1 0 0 0
................................................................TTGGTGACCGACACTAACTGGT.............................................................................................................. 22 2 1 13.00 13 10 3 0 0 0 0
................................................................TTTGTGACCGACACTAACGGCA.............................................................................................................. 22 2 1 13.00 13 4 9 0 0 0 0
................................................................TTTGTGAACGACACTAACGGGC.............................................................................................................. 22 2 1 13.00 13 0 13 0 0 0 0
................................................................TTTGTGACCGACACTAACTGGTAA............................................................................................................ 24 2 1 13.00 13 12 1 0 0 0 0
................................................................TTTGACACCGACACTAACGGGT.............................................................................................................. 22 2 1 13.00 13 0 13 0 0 0 0
................................................................TTTGTGACCGACACTATCGGGC.............................................................................................................. 22 2 1 13.00 13 0 13 0 0 0 0
................................................................TTTGTGACCGACACTACCGGGG.............................................................................................................. 22 2 1 13.00 13 0 13 0 0 0 0
................................................................TTTGTTACCGACACTAACGGG............................................................................................................... 21 1 1 13.00 13 8 0 5 0 0 0
................................................................TTTGTGACCGACACAAACGGGT.............................................................................................................. 22 1 1 13.00 13 8 5 0 0 0 0
................................................................TTGGTGACCGAAACTAACGGGT.............................................................................................................. 22 2 1 13.00 13 13 0 0 0 0 0
................................................................TTGGTGACCGACACTAACGGGG.............................................................................................................. 22 2 1 13.00 13 6 7 0 0 0 0
.............................................................................................................CTCGTTTTTGCGATCACAAATCCTT.............................................................. 25 1 1 12.00 12 8 0 4 0 0 0
...................................................................GTGACCGACACTAACGGGT.............................................................................................................. 19 0 1 12.00 12 6 0 5 1 0 0
................................................................TTTGTGACCGGCTCTAACGGGT.............................................................................................................. 22 2 1 12.00 12 0 12 0 0 0 0
................................................................TTTGGGACCGACACTAACGGG............................................................................................................... 21 1 1 12.00 12 0 11 1 0 0 0
................................................................TTTGTGACCGGCACTAACGGGC.............................................................................................................. 22 2 1 12.00 12 0 12 0 0 0 0
................................................................TTTGTGACGGACACTAACGGGG.............................................................................................................. 22 2 1 12.00 12 0 1 11 0 0 0
................................................................TTTGTGACCGACACTAACGTG............................................................................................................... 21 1 1 12.00 12 10 2 0 0 0 0
................................................................TTTGTGACCGGCACTAACGGGTA............................................................................................................. 23 1 1 12.00 12 6 6 0 0 0 0
................................................................TGTGTGACCGACTCTAACGGGT.............................................................................................................. 22 2 1 12.00 12 0 12 0 0 0 0
................................................................TTTGTTACCGACACTAACGG................................................................................................................ 20 1 1 12.00 12 10 1 1 0 0 0
................................................................ATTGTGACCGACACTAACGGGC.............................................................................................................. 22 2 1 12.00 12 0 12 0 0 0 0
................................................................TTTGTGACCGCCACTCACGGGT.............................................................................................................. 22 2 1 11.00 11 0 11 0 0 0 0
................................................................TTTGTGACCGACCCTAACGGGTA............................................................................................................. 23 1 1 11.00 11 5 6 0 0 0 0
................................................................TTTGGGACCGACACTACCGGGT.............................................................................................................. 22 2 1 11.00 11 0 11 0 0 0 0
................................................................TTTGTGACCGACACTAACCGCT.............................................................................................................. 22 2 1 11.00 11 0 11 0 0 0 0
.............................................................................................................CTCGTTTTTGCGATCACAAAT.................................................................. 21 0 1 11.00 11 11 0 0 0 0 0
................................................................TTTGTGACCGACACTAACCGGTA............................................................................................................. 23 1 1 11.00 11 6 5 0 0 0 0
................................................................TGTGGGACCGACACTAACGGGT.............................................................................................................. 22 2 1 11.00 11 0 11 0 0 0 0
................................................................TTTGTGACCGACACTAACGGGTAAT........................................................................................................... 25 1 1 11.00 11 6 5 0 0 0 0
................................................................TTTGTGACCGACACTAAAGGGC.............................................................................................................. 22 2 1 11.00 11 0 11 0 0 0 0
................................................................TTTGTCACCGACACTAACGGGC.............................................................................................................. 22 2 1 11.00 11 0 11 0 0 0 0
................................................................TTTGTGACCGACACTAACTGTT.............................................................................................................. 22 2 1 11.00 11 7 4 0 0 0 0
.................................................................TTGTGACCGACACTAACGGGA.............................................................................................................. 21 1 1 11.00 11 4 0 7 0 0 0
................................................................TTTGTGACCGCCACTAACGGGTA............................................................................................................. 23 1 1 11.00 11 6 5 0 0 0 0
................................................................TTTGTCACCCACACTAACGGGT.............................................................................................................. 22 2 1 11.00 11 0 11 0 0 0 0
.................................................................TTTGTACCGACACTAACGGGT.............................................................................................................. 21 3 3 10.33 31 27 0 3 1 0 0
................................................................TTTGGGACCGACACTAACGTGT.............................................................................................................. 22 2 1 10.00 10 0 10 0 0 0 0
................................................................TTTGTGACCGACACTAACCGG............................................................................................................... 21 1 1 10.00 10 2 8 0 0 0 0
................................................................TTGGTGACCGACTCTAACGGGT.............................................................................................................. 22 2 1 10.00 10 0 10 0 0 0 0
................................................................GTTGTGACCGACACTAACGGGC.............................................................................................................. 22 2 1 10.00 10 0 9 1 0 0 0
................................................................TTTGTGACCGACAATAACGGGG.............................................................................................................. 22 2 1 10.00 10 0 10 0 0 0 0
................................................................TTTGTGACCGACACTAACGGGTAGT........................................................................................................... 25 1 1 10.00 10 5 2 1 2 0 0
................................................................TTTGGGACCGACACTAACGCGT.............................................................................................................. 22 2 1 10.00 10 0 10 0 0 0 0
................................................................TTTGTGAACGACACTAACGGGTA............................................................................................................. 23 1 1 10.00 10 3 5 1 1 0 0
................................................................GTTGGGACCGACACTAACGGGT.............................................................................................................. 22 2 1 10.00 10 0 10 0 0 0 0
................................................................TTGGTGACCGACACTAACGGT............................................................................................................... 21 2 1 10.00 10 10 0 0 0 0 0
................................................................TTTGCGACCGACACTAACGCGT.............................................................................................................. 22 2 1 10.00 10 0 10 0 0 0 0
................................................................TTTGTGACCGACACTTACGGGG.............................................................................................................. 22 2 1 10.00 10 0 10 0 0 0 0
................................................................TTTGTGACCGACACTAACGGGTTG............................................................................................................ 24 2 1 10.00 10 6 1 3 0 0 0
................................................................TTTGTGACCGACACTAACGCG............................................................................................................... 21 1 1 10.00 10 1 9 0 0 0 0
................................................................TTTGTGACCGACACCAACGGGTA............................................................................................................. 23 1 1 10.00 10 4 5 1 0 0 0
................................................................TTTGTGACCGACACTCACGGGTA............................................................................................................. 23 1 1 10.00 10 0 9 0 1 0 0
................................................................TTTGTGACCGACACTAAAGGGTA............................................................................................................. 23 1 1 10.00 10 6 4 0 0 0 0
................................................................TTTGTGACGGACACTAACGGGA.............................................................................................................. 22 2 1 10.00 10 2 1 7 0 0 0
.................................................................TTGTGACCCACACTAACGGGT.............................................................................................................. 21 1 1 10.00 10 0 0 10 0 0 0
................................................................TTTGTGACCTACACTAACGTGT.............................................................................................................. 22 2 1 10.00 10 3 7 0 0 0 0
................................................................TTTGTGACCGACAATAACGGGTA............................................................................................................. 23 1 1 9.00 9 2 6 0 1 0 0
................................................................TTTGTGACCGAAACTAACGGGC.............................................................................................................. 22 2 1 9.00 9 0 9 0 0 0 0
................................................................TTTGTGACTGACACTAACGTGT.............................................................................................................. 22 2 1 9.00 9 4 5 0 0 0 0
................................................................TTTGTGACCGACACTACCGGGA.............................................................................................................. 22 2 1 9.00 9 0 9 0 0 0 0
................................................................TTTGTGACCGACCCTACCGGGT.............................................................................................................. 22 2 1 9.00 9 0 9 0 0 0 0
................................................................TTTGTGACCGACACGAACGGGG.............................................................................................................. 22 2 1 9.00 9 0 9 0 0 0 0
..................................................................TGTGACCGACACTAACGGG............................................................................................................... 19 0 1 9.00 9 0 0 9 0 0 0
................................................................TTTGTGACCGGCACTAACGGG............................................................................................................... 21 1 1 9.00 9 3 3 3 0 0 0
................................................................TTGGTGACCGACACTAACGGGTAA............................................................................................................ 24 2 1 9.00 9 7 2 0 0 0 0
................................................................TTTGGGACCGACACTAACGGGTAT............................................................................................................ 24 1 1 9.00 9 0 8 0 1 0 0
................................................................TTTGTTACCGACACTAACGGGTAA............................................................................................................ 24 2 1 9.00 9 8 1 0 0 0 0
................................................................TTTGTGACCGACACTAACGGGGAA............................................................................................................ 24 2 1 9.00 9 0 6 3 0 0 0
................................................................TTTGGGACCGACACTAAAGGGT.............................................................................................................. 22 2 1 9.00 9 0 9 0 0 0 0
................................................................TTTGTGACAGACACTAACGGGTAA............................................................................................................ 24 2 1 9.00 9 5 2 2 0 0 0
................................................................TTTGTGACCGACGCTAACGGGC.............................................................................................................. 22 2 1 9.00 9 0 9 0 0 0 0
................................................................TTTGTGACCGACACTACCGTGT.............................................................................................................. 22 2 1 9.00 9 0 9 0 0 0 0
................................................................TTTGTTACCGACACTAACGGGC.............................................................................................................. 22 2 1 9.00 9 2 7 0 0 0 0
................................................................TTTGTGACCGAAACTAACGGGTA............................................................................................................. 23 1 1 9.00 9 6 2 1 0 0 0
................................................................TTTGTGAACGACAATAACGGGT.............................................................................................................. 22 2 1 9.00 9 2 7 0 0 0 0
.................................................................TTTGGACCGACACTAACGGGT.............................................................................................................. 21 2 1 9.00 9 8 1 0 0 0 0
................................................................TTTATGACCGACACTAACGGGTA............................................................................................................. 23 1 1 9.00 9 3 1 4 1 0 0
................................................................TTTGTGACCGACCCTAACGGGG.............................................................................................................. 22 2 1 9.00 9 0 9 0 0 0 0
................................................................TTTGTGACCGACACTACGGGT............................................................................................................... 21 3 3 8.33 25 22 2 1 0 0 0
................................................................TTTGGGACCGACGCTAACGGGT.............................................................................................................. 22 2 1 8.00 8 0 8 0 0 0 0
................................................................TGTGTGACCGACAATAACGGGT.............................................................................................................. 22 2 1 8.00 8 0 8 0 0 0 0
................................................................TTTGTGACCGACACTAACGGAA.............................................................................................................. 22 2 1 8.00 8 4 3 1 0 0 0
................................................................TTGGTGAACGACACTAACGGGT.............................................................................................................. 22 2 1 8.00 8 2 6 0 0 0 0
................................................................TTTGTGACCGACACTAACAGG............................................................................................................... 21 1 1 8.00 8 4 3 1 0 0 0
................................................................TTTGTGACCGACACTAACTGAT.............................................................................................................. 22 2 1 8.00 8 7 0 0 1 0 0
................................................................TTTGTGACCTACACTAACGGGTAA............................................................................................................ 24 2 1 8.00 8 6 1 0 1 0 0
................................................................TGGGTGACCGACTCTAACGGGT.............................................................................................................. 22 3 1 8.00 8 0 8 0 0 0 0
................................................................TTTGTGACCGACACTATCGGCT.............................................................................................................. 22 2 1 8.00 8 0 8 0 0 0 0
...................................................................GTGACCGACACTAACGGGTA............................................................................................................. 20 0 1 8.00 8 0 0 8 0 0 0
................................................................TTTGCGACCGACTCTAACGGGC.............................................................................................................. 22 3 1 8.00 8 0 8 0 0 0 0
................................................................TTTGTGACCGACACTCACCGGT.............................................................................................................. 22 2 1 8.00 8 0 8 0 0 0 0
...............................................................GTTTGTGACCGACACTAACGGGT.............................................................................................................. 23 1 1 8.00 8 0 0 8 0 0 0
................................................................TTTGGGAACGACACTAACGGGT.............................................................................................................. 22 2 1 8.00 8 0 8 0 0 0 0
................................................................TTTGTTACCGACACTAACGTGT.............................................................................................................. 22 2 1 8.00 8 5 2 0 1 0 0
................................................................TTTGTGACCAACACTAACGGG............................................................................................................... 21 1 1 8.00 8 0 2 6 0 0 0
................................................................TTTGTGACAGACACTAACGGGTAT............................................................................................................ 24 1 1 8.00 8 1 2 5 0 0 0
.................................................................TTGTGACCGACACTAACG................................................................................................................. 18 0 1 8.00 8 0 0 8 0 0 0
................................................................TTGGTGACCGACACTAACCGGT.............................................................................................................. 22 2 1 8.00 8 1 7 0 0 0 0
................................................................TTTGTGACCTACACTAACGGGC.............................................................................................................. 22 2 1 8.00 8 0 8 0 0 0 0
................................................................TTTGTGACCGACATTAACGGGTA............................................................................................................. 23 1 1 8.00 8 4 3 1 0 0 0

Anti-sense strand reads

AATATGAAAATAACAAAGCCTCACTTCACGGAAAAAAATTTTTTGTCTTTACAACGTCAAAGCAAAACACTGGCTGTGATTGCCCATAAAATGTCCTGTATGTCCTAATGAGCAAAAACGCTAGTGTTTAGGACTTTAACGTCGTTTTTTGTCGTTTCTTTTGTAACATAAACCACACTTAATAAAAATAATTTAA

**************************************************.(((((((((((((.(((((((.((.((..((((((((.(((............))).))))))))..)))).)))))))...))))))))))))).************************************************* 		Read size # Mismatch Hit Count Total Norm Total V039

embryo

 M058

embryo

 V055

head
........................................................................................................................................TAACGTCGATTTTAGTCGTTTCT..................................... 23 2 1 1.00 1 1 0 0
......................................................................................................................................................GTCGTGTCTTTGGTAGCATAA......................... 21 3 1 1.00 1 1 0 0
........................................................................................................................................TTACGTCGTTTTTAGTGGTTTCT..................................... 23 3 2 0.50 1 1 0 0
................AGCCACTCTTAACGGAAAAAAA.............................................................................................................................................................. 22 3 3 0.33 1 0 1 0
.......................................................................................................................................................................AGAAACCGCACTTCATAAAAA........ 21 3 17 0.06 1 0 1 0
...............................................................................................CTGTATGTCCCATAGAGC................................................................................... 18 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_13337:5918572-5918767 + dan-mir-274 Known_mirbase TTAT-----------------------------ACT--------------------------TTTATTGTTT---------CG--------------------------------------G------AGTGAAGTG----CCTTTTTTTAAAAAACAG-------A------------------------AATGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTATTTTACAGG-ACA-------------------TACAGGA-T--TACTCGTTTTTGCGATCACAAATCCTGAAATTGCAGCAAAA-AACAGCAAAGA-------------------------AAACATTGTATTTGGTGTG------------------------A--A------T--------TATTTTTATTAAATT-------
droBip1 scf7180000396371:1256500-1256719 + CTAA-----------------------------ACT--------------------------TTATTACG---------------------------------------------------G------AGTGAAGTG----TTTTT-----GAAGACA----------------------------G----AATGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTATTTTACAGG-ATT-------------------TACAGGA-T--TACTCGTTTTTGCGATCACAAATCCTGAAATTGCAGCAAAA-AACAGCAAAAATA-----------------------AAATATCATAGTTGGTGTAAATATTAGAAACCGTAAAAATGTGTTTTTTAAAAAAAGGAGACTAT--------TTTT-------
droKik1 scf7180000302391:1192108-1192317 - ATAT-----------------------------ATA--------------------------TATATATATA----TA---------TAGTG------------------GAAATAGTAAAAAGTT-------CCTATCCT-------------------------------------------TTTTTAACGTGTTGCTGTTTCGCTTTGTGACCGACACTAACGGGTAATTGTTTGG-CCTTC---T--TAGCCGTT--CCGCTGGA-T--TACTCGTTTTTGCGATCACAAATCCTGAAATTGCAGCTAAG-AGCAGCATTCAAGTGGAACTAGTGAACGT--------------ATAATTTGTGTG------------------------T--T-------------------------------------
droFic1 scf7180000454113:3056714-3056885 - TTACT-TTATATTTGC-----------------------CCAGGCTAAAGCC------------------------------AGTGA--------TC----------------------AGGAGTT-------CCTATCCT---------------------------------------------------GTGTTGTTGTTTCGTTTTGTGACCGACACTAACGGGTAATTGATCGG-CCCCC---AA-AAGCCGCCCACCGCAGGA-T--TACTCGTTTTTGCGATCACAAATCCTGAAATTTCAGCAAAG-AGCAGCAA----------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490993:2151299-2151439 - TGGT-----------------------------GCT-------------TCT------------------------------GGTGA--------TC----------------------AAGAGTT------CCGAATCCT---------------------------------------------------GTGCTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGATTGG-CCC-------------------CGCAGGA-T--TACTCGTTTCTGCGATCACAAATCATGAAATTGCAGCCAAA-AGCAACAAA---------------------------------------------------------------------------------------------------------------
droRho1 scf7180000778919:8972-9130 + TCAAT-TTAAATCAGC-----------------------CCATGGTGCAGCT------------------------------AGTGA--------TC----------------------AAGAGTT------CCAAATCCT---------------------------------------------------GTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTCGG-CTC-------------------CGCAGGA-T--TACTCGTTTTTGCGATCACAAATCATGAAATTGCAGCAAAA-AGCAGCAAA---------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302334:85622-85774 + CTACT-CCAAATCACC-------------------------------------------------------------------------------------------------------------TCCAAACCCACATCCT---------------------------------------------------GTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTCCGG-CCCCC---AG-GAGCCGCC--CCTCAGGA-T--TACTCGTTTTTGCGATCACAAATCCTGAAATTGCAGCAAAG-AGCAGCAAAG--------------------------------------------------------------------------------------------------------------
droTak1 scf7180000414445:560335-560503 - ACACC-TCAAAT-----------GG---------------------AAAACA------------------------------AGTTA--------CC----------------------AAGAGTTCCGAATCCGAATCCT---------------------------------------------------GTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTCGG-CCCCC---AA-AAGCCGCC--CCGCAGGA-T--TACTCGTTTTTGCGATCACAAATCCTGAAATTGCAGCAAAG-AGCAGCAAA---------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409711:3524208-3524414 + TAAT--------CACC-----------------------TCAGGGTCCAACT------------------------------AATTA--------TC----------------------AAGAGTT------CCAAATCCT---------------------------------------------------GTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTATGG-CCTAA---AAGGAGCCGCT--CACCAGGA-T--TACTCGTTTTTGCGATCACAAATCATGAAATTGCAGCAAAA-AGCAGCTAAATCAGGGAACTAGTGAATA--------TAATATATGGATTTGTGTG------------------------A--AT------------------------------------
dm3 chr3L:11649958-11650198 + dme-mir-274 Known_mirbase TAGTTTTTGAAACACCTTTAAGTGCATTTTAATTTTAAT-----------------ATTGGT----------------AGTTT----T----------------------------------------GGTGACGAATCCT---------------------------------------------------GTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGG-CCGC--------------------CAGGA-T--TACTCGTTTTTGCGATCACAAATTATGAAATTGCAGCAAAA-CTCAACGAAATTGTGGAACCAGTAAAAATAGATAGAAAATAATATGTTTTGTGTG------------------------C--TTGTGAAC--------TATAAGTTTGCATTC-------
droSim2 3l:11358219-11358428 + dsi_305 confident TAAT-----------------------------GTTAAT-----------------ATTGTT----------------AGTTT----T----------------------------------------AGTGACAAATCCT---------------------------------------------------GTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGG-TCAC--------------------CAGGA-T--TACTCGTTTTTGCGATCACAAATCATGAAATTGCAGCAAAA-CGCAACAAAGTCGTGGAACTAGTGAAAATATATAGAAAATAATAAGTTTTGTGTG------------------------C--TTGTGAAC--------TATAAGA-TGAATT--------
droSec2 scaffold_0:3836993-3837199 + dse-mir-274 Known_mirbase TTTT--------------------------AATTTTAAT-----------------ATTGTT----------------AGTTT----T----------------------------------------AGTGACAAATCCT---------------------------------------------------GTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGA-TCAC--------------------CAGGA-T--TACTCGTTTTTGCGATCACAAATCATGAAATTGCAGCAAAA-CGCAACAAATATATAGAA--------AATATATAGAAAATAATAAGTTTTGAGTG------------------------A--TTGTGAAC--------TATAAGTTTGCATTC-------
droYak3 3L:11678595-11678810 + dya-mir-274 Known_mirbase ACCT-------------TTAAGTGC-----------------------AGCTAGTTAGTGTTTGATTT------------------------------------------------------------TATGCCGAATCCT---------------------------------------------------GTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGG-TCGC--------------------CAGGA-T--TACTCGTTTTTGCGATCACAAATCATGAAATTGCAGCAAAA-CGCAACAAAGTCGTGAAACCAGTGA-------------ATAATCAGTTTTGTGTG------------------------C--AAGGAAAC--------TACAACTTTGCATTCTAAAATG
droEre2 scaffold_4784:11632257-11632409 + der-mir-274 Known_mirbase ACCC-------------ATAAGTGC-----------------------AGCTGGTTAGTGCTTGATTT------------------------------------------------------------TATGGCCAATCCT---------------------------------------------------GTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGG-CCGC--------------------CAGGA-T--TACTCGTTTTTGCGATCACAAATCATGAAATTGCAGCAAAA-CGCAACGAAG--------------------------------------------------------------------------------------------------------------
dp5 XR_group6:10040183-10040358 - dps-mir-274 Known_mirbase GTCT-----------------------------GTG--------------------------TGACTGTGTGACCGTG---------TGGTG-------------------------------------------------GCATTCCCCTGGGACCTG-------GGACCTGGCACCTGGAACCTGGTCCCGTGCTGCAGTTTCATTTTGTGACCGACACTAACGGGTAATGGC-TGG-CC---------------------GCAGGA-C--TACTCGTTTTTGCGATCACA-ATACTGAAATTGCAGCAACG-AGCAGCGAA---------------------------------------------------------------------------------------------------------------
droPer2 scaffold_61:320245-320427 - dpe-mir-274 Known_mirbase GTCT-----------------------------GTG--------------------------TGACTGTGTGACCGTG---------TGGTG-------------------------------------------------GCATTCCCCTGGGACCTGGCACCTGGGACCTGGCACCTGGGACCTGGTCCCGTGCTGCAGTTTCATTTTGTGACCGACACTAACGGGTAATGGC-TGG-CC---------------------GCAGGA-C--TACTCGTTTTTGCGATCACA-ATACTGAAATTGCAGCAACG-AGCAGCGAA---------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004762:2705137-2705312 - dwi-mir-274 Known_mirbase TTGT-----------------------------GTT--------------------------TTTTTTTTTTACTGTT--------GTTTTGTGATT----------------------AT----T------TTTAA---------------------------------------------------TATCCTGTTGCAGTTTCATTTTGTGACCGACACTAACGGGTAGTAAC--GGGTTAAC----A-AAGTCGTT--TTTCTGGCCTTTTACTCGTTTTTGCGATCACAAATTCTGAAATTGCAGCAAAAGATCAACGTATA-------------------------CAACA-------------------------------------------------------------------------------
droVir3 scaffold_13049:23860684-23860836 + dvi-mir-274 Known_mirbase GTGT-----------------------------TTTC--CCA-----------------GTG----------------AATCC--------------------------------------C------AATGTCGCATCCT---------------------------------------------G----TTTGTTGCAGTTTCGGTTTGTGACCGACACTAACGGGTAGTTGG---G-GCACCTCGAATA----------CGCTGTT-T--TACTCGTTTTTGCGATCACAAATTCTGAAATTGCAACGAAA-AGCAACAAGAAAA-----------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:18485443-18485615 + dmo-mir-274 Known_mirbase ATAC-----------------------------ACA--------------------------TATATGTTTAGT---GAATCTGTTG--------TC----------------------AAGTG-----------TATCCT---------------------------------------------------GTGTTGCAGTTTCGGTTTGTGACCGACACTAACGGGTAGTTGA--GG-CATC-TCGTATT----------CGCTGTT-TTATACTCGTTTTTGCGATCACAAATTCTGAAATTGCAACGAAA-CGCAACGAAAATG-------------------------A---AAA-----G-------------------------------------------------------TGCATT--------
droGri2 scaffold_15110:13805596-13805789 - dgr-mir-274 Known_mirbase GTGT-----------------------------GTG--------------------------TGTGTGCGTGTGTGTA---------GAGTGTGTGTATATTGAAAAAGTGAAATAGTGC-----AACGTATACGAGTCCT---------------------------------------------G--TGCGTGTTGCAGTTTCGGTTTGTGACCGACACTAACGGGTAGTTAAAGGG-CATCCTCG-------CATT--CTGCTGGC-T--TACTCGTTTTTGCGATCACAAATTCTGAAATTGCAACGAAA-ATCAACAAA---------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TTAT-----------------------------ACT--------------------------TTTATTGTTT---------CG--------------------------------------G------AGTGAAGTG----CCTTTTTTTAAAAAACAG-------A------------------------AATGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTATTTTACAGG-ACA-------------------TACAGGA-T--TACTCGTTTTTGCGATCACAAATCCTGAAATTGCAGCAAAA-AACAGCAAAGA-------------------------AAACATTGTATTTGGTGTG------------------------A--A------T--------TATTTTTATTAAATT-------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................221187009.001870091155326444083515127525
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................23119217.001921779780033901697680
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGG...............................................................................................................................................................................................................2114206.004206210000666411399
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGG................................................................................................................................................................................................................2013038.00303838700389262236
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGA..............................................................................................................................................................................................................2212281.00228110600660471468
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGC..............................................................................................................................................................................................................2211610.001610430011277433
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................2411484.0014841030036616999
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................2411398.0013982020155930606
...............................................................................................................................................................................................................TTTGTGACCGACACTAACG.................................................................................................................................................................................................................1911302.001302177006064515
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGT...............................................................................................................................................................................................................2111251.00125121008941137
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................2111244.0012441031001008105
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTT.............................................................................................................................................................................................................231806.00806133002687398
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGG..............................................................................................................................................................................................................221725.0072539004124270
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................221679.0067966400708
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGT................................................................................................................................................................................................................201433.004335009934295
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATC..........................................................................................................................................221240.00240100083219
................................................................................................................................................................................................................TTGTGACCGACACTAACGGG...............................................................................................................................................................................................................201172.0017216900201
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGT..............................................................................................................................................................................................................20195.0095620014019
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTATT...........................................................................................................................................................................................................25194.0094120028450
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTC.............................................................................................................................................................................................................23188.008890058021
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAC............................................................................................................................................................................................................24183.0083570015011
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAG............................................................................................................................................................................................................24181.0081200013048
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATCCT........................................................................................................................................24174.0074260010236
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGA...............................................................................................................................................................................................................21171.007110022048
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATCC.........................................................................................................................................23168.006820007041
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTA..............................................................................................................................................................................................................22137.00376006025
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................21137.00373600100
................................................................................................................................................................................................................TTGTGACCGACACTAACGG................................................................................................................................................................................................................19136.00363500100
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAA...........................................................................................................................................................................................................25132.00325006021
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTG.............................................................................................................................................................................................................23126.0026900809
..............................................................................................................................................................................................................TTTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................23121.00211400403
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTTA............................................................................................................................................................................................................24120.00201005014
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGC...............................................................................................................................................................................................................21119.0019100909
...................................................................................................................................................................................................................TGACCGACACTAACGGGT..............................................................................................................................................................................................................18119.00193000016
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTC..............................................................................................................................................................................................................22118.00180001602
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................23118.00181600200
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTG..............................................................................................................................................................................................................22117.00170001700
...............................................................................................................................................................................................................TTTGTGACCGACACTAAC..................................................................................................................................................................................................................18116.0016100807
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................23116.00161300201
...............................................................................................................................................................................................................TTTGTGACCGACACTAACT.................................................................................................................................................................................................................19116.00160003013
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTT.............................................................................................................................................................................................................22115.00151500000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGTT...............................................................................................................................................................................................................21115.00150005010
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGCT.............................................................................................................................................................................................................23115.00151001301
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGCC..............................................................................................................................................................................................................22114.00140001400
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGCA..............................................................................................................................................................................................................22113.0013000904
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATCCTT.......................................................................................................................................25112.0012400008
..................................................................................................................................................................................................................GTGACCGACACTAACGGGT..............................................................................................................................................................................................................19112.0012500016
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAAT...........................................................................................................................................21111.00110000011
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGA..............................................................................................................................................................................................................21111.0011700004
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTTG............................................................................................................................................................................................................24110.0010300106
.................................................................................................................................................................................................................TGTGACCGACACTAACGGG...............................................................................................................................................................................................................1919.009900000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGAA..............................................................................................................................................................................................................2218.008100304
..................................................................................................................................................................................................................GTGACCGACACTAACGGGTA.............................................................................................................................................................................................................2018.008800000
................................................................................................................................................................................................................TTGTGACCGACACTAACG.................................................................................................................................................................................................................1818.008800000
droBip1
CTAA-----------------------------ACT--------------------------TTATTACG---------------------------------------------------G------AGTGAAGTG----TTTTT-----GAAGACA----------------------------G----AATGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTATTTTACAGG-ATT-------------------TACAGGA-T--TACTCGTTTTTGCGATCACAAATCCTGAAATTGCAGCAAAA-AACAGCAAAAATA-----------------------AAATATCATAGTTGGTGTAAATATTAGAAACCGTAAAAATGTGTTTTTTAAAAAAAGGAGACTAT--------TTTT-------SizeHit CountTotal NormTotal
No Reads
droKik1
ATAT-----------------------------ATA--------------------------TATATATATA----TA---------TAGTG------------------GAAATAGTAAAAAGTT-------CCTATCCT-------------------------------------------TTTTTAACGTGTTGCTGTTTCGCTTTGTGACCGACACTAACGGGTAATTGTTTGG-CCTTC---T--TAGCCGTT--CCGCTGGA-T--TACTCGTTTTTGCGATCACAAATCCTGAAATTGCAGCTAAG-AGCAGCATTCAAGTGGAACTAGTGAACGT--------------ATAATTTGTGTG------------------------T--T-------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTACT-TTATATTTGC-----------------------CCAGGCTAAAGCC------------------------------AGTGA--------TC----------------------AGGAGTT-------CCTATCCT---------------------------------------------------GTGTTGTTGTTTCGTTTTGTGACCGACACTAACGGGTAATTGATCGG-CCCCC---AA-AAGCCGCCCACCGCAGGA-T--TACTCGTTTTTGCGATCACAAATCCTGAAATTTCAGCAAAG-AGCAGCAA----------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TGGT-----------------------------GCT-------------TCT------------------------------GGTGA--------TC----------------------AAGAGTT------CCGAATCCT---------------------------------------------------GTGCTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGATTGG-CCC-------------------CGCAGGA-T--TACTCGTTTCTGCGATCACAAATCATGAAATTGCAGCCAAA-AGCAACAAA---------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TCAAT-TTAAATCAGC-----------------------CCATGGTGCAGCT------------------------------AGTGA--------TC----------------------AAGAGTT------CCAAATCCT---------------------------------------------------GTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTCGG-CTC-------------------CGCAGGA-T--TACTCGTTTTTGCGATCACAAATCATGAAATTGCAGCAAAA-AGCAGCAAA---------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CTACT-CCAAATCACC-------------------------------------------------------------------------------------------------------------TCCAAACCCACATCCT---------------------------------------------------GTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTCCGG-CCCCC---AG-GAGCCGCC--CCTCAGGA-T--TACTCGTTTTTGCGATCACAAATCCTGAAATTGCAGCAAAG-AGCAGCAAAG--------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ACACC-TCAAAT-----------GG---------------------AAAACA------------------------------AGTTA--------CC----------------------AAGAGTTCCGAATCCGAATCCT---------------------------------------------------GTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTCGG-CCCCC---AA-AAGCCGCC--CCGCAGGA-T--TACTCGTTTTTGCGATCACAAATCCTGAAATTGCAGCAAAG-AGCAGCAAA---------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TAAT--------CACC-----------------------TCAGGGTCCAACT------------------------------AATTA--------TC----------------------AAGAGTT------CCAAATCCT---------------------------------------------------GTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTATGG-CCTAA---AAGGAGCCGCT--CACCAGGA-T--TACTCGTTTTTGCGATCACAAATCATGAAATTGCAGCAAAA-AGCAGCTAAATCAGGGAACTAGTGAATA--------TAATATATGGATTTGTGTG------------------------A--AT------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TAGTTTTTGAAACACCTTTAAGTGCATTTTAATTTTAAT-----------------ATTGGT----------------AGTTT----T----------------------------------------GGTGACGAATCCT---------------------------------------------------GTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGG-CCGC--------------------CAGGA-T--TACTCGTTTTTGCGATCACAAATTATGAAATTGCAGCAAAA-CTCAACGAAATTGTGGAACCAGTAAAAATAGATAGAAAATAATATGTTTTGTGTG------------------------C--TTGTGAAC--------TATAAGTTTGCATTC-------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................221776433.0077643300001229000000009751401400127140284505742737927914354103383734090203391939403698131372620325228582138000100962600000000000000000000046713000000011083113797148831102752077301901122370902114207716764378251625903100108361082263902902869773183789825002722161012180010001421181421132892215470000035202872228327900019465472919669120953151573743518755702786313908442610633352947111283154033196522600130000011618700320001037827932292169111320929847732444550621100152005122470218635351031876924810284860631127885772301321134633013462544240017280618697914798902124531335384062882044985101016226551165117851965122516814823826726171482575544500010201135794372150781435386123873173150242311
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................231375656.003756560000310400000301156710016076021337241304022415363119909624443401023747486411422351078000191280460000000000000000000014861901600005421444162221134616052035337067133533563040921173923772816331142151735915657049701842471539687665767478008000013181926200000002714220650750000000001022489297560187286129106051388147315685527145021311640019301203003347649529533211003243447600000415100000000017113084993051242402314523615051055700000583900310454169638118272058194117600210110314010000612205310451801232237916870000518423507251438131136520016631621118317049980727183428710000000000303316421698235163210001000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................24171134.00711340000124400000000119603180020601000000000012002200400002211000000000000000000000000000154110000000113281196467288000521531700176811200014463538058381227235363632117311871126170820390000120510000001121049100500000000000708787270490648162428855631734041346588513017000048513863218000013921590000005100001000001316710950523274120481140000025210010051291140001585271750000017900000000000002173481421962900002106013831287145100943301761111108044871006600001000000456224114611830000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGG...............................................................................................................................................................................................................21166369.0066369000031200000000115223099900011916000782542665169123100321000040520001010000409340000000000000000000001041000000000110002721776000179280040114011086435658984716741131397159031172729710921846122404205200000000001300000000005000040964848029361782942201760293592435219550837200000910360039000034027000000020010000001737411938235119185261001530000030286110003301410217900100122000000000000043080307260000034536332689010199011031044046920015400000000000237264312201016000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................24149656.0049656000012450000000032201034011130004365325072144950180000101300001000000299246590000000000000000000001538006010051365001118432050007201313001002071501123612221820823234229215890111116814797612010000020220000000000015000000000000000412852110330484104224915827304120922325612300000294813624902005104600000074000001900016115341555676821200003726000003720460002594891820000014801000000100003133131041321500000482743548690004014010740035023561204500000000000273282310281013000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGG................................................................................................................................................................................................................20111980.0011980000070000000002310846000001230000108300000001000000000100000012500000000000000000000001600000000001100182500001741000002000000398484131501872676239626928338480220000330000000000000000000000000076111630546262303861659463660567943000007936010000050500000000000000000022310071104000040000001763000747332590000034000000000000000130011010000218919425141100711201002024000020000000000010585222456001000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTT.............................................................................................................................................................................................................23110804.00108040000500000000040025100007000000000000000000000000000000000000000000000000000000000210000010000920015190000851300000000000194561195360652215012291724226300000000000000000010300010000000000086688206080064022610274119938136866000001883140400001002000000100000000000134103242404000083000001872400050170020000001800000000000000003001000000008611110915900120500002058000000000000000056552124000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGA..............................................................................................................................................................................................................2219862.009862000010000000000100500001110000000000001000022010000020000000000000000000000000000025000000000037003120000364000000000000510812421480183254974124778374000000000000000000008000000000000000371400028701167247519484040424680000013829016000080700000002000000000461640015000100007400000101624000494201270000034000000000000000228144301150000048434047663310700104301450354700002000000000001867119527813000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGC..............................................................................................................................................................................................................2219831.0098310000500000000030000001215000000000000300112301000111000000000000000000000000000009000000000050041500002410000020000007972092122010915488312838145790000000000100000100011000000000000010608631051500184702401300239353100001518141900004030000001000000000006480015010000000000000816718000591860300000036000000000000010681322120217000034235174245380074044123213916752101030000000000027457277251619001000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGG..............................................................................................................................................................................................................2219407.009407000001000000000000000025000000000000400000901000304010000000000000000000000000001000000000020091200002200000001000028121352038442461421413910218013800000000000000000000400000000000100030837302760041136258171548932400000475110120000607000000110000000000101100120000000000000001021415000111213258000007200000000000001042213182800000455565491152002140235421104067790000000000000000141881241458100000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACG.................................................................................................................................................................................................................1918175.0081750000000000000000044011060400033262351614600110000001100000010004310000000000000000000001910000000002510571025000019970020121020175345783251331523015225140184002100000000000000000300000000000000032944302193417518062553735134418800000650642310000170350000002000000000061423511140100010000000002613030006961103000001380000000000000100501030400000130144205344005904010060173800003000000000001040529113811000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTC.............................................................................................................................................................................................................2315674.005674000010000000002000000017000000000000000000100000000000000000000000000000000000009000000000090065030000810000000000001821596979131100452621204481441546000000000000000000000000000000000001022118301420012181901702620000088001000000000000000000000000003000000000000055180000076510002755040000080000000000000000000000000000131593600200000001301400000000000000000711010000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTATC...........................................................................................................................................................................................................2515487.0054870000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000020000000000000175010100030240000000000000000000000000000000000003604002303250110000007001000000000000000000000000000000000011000035301862000000000000001000001000000000000000000000000000044330000000000000000000000000000000201000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAC............................................................................................................................................................................................................2415339.00533900001200000000011003100000000000000000000000001000000000000000000000000000000000001300000000002200936361000132400100310100565625423103012761191191741990000000020000000000000000000000000004024450302012491694193038315412000000676601100000100000011000000000122031322813000026150000011300001929051000050000000000000000000000100000102214330031000000200100000000000000001700000000000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................2114519.004519000020000000001005000017010111740125820000000000000000000000012000000000000000000000030000000000400704000026100000000000011952481440616630910711338610000310040000000000010000000000000001873060235211563198444137915230000031560900009030000000300000000029530011110200000000000441200019540900000110000000000000002401000400000586549820002000100300110103000000000000594821259000000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................2213663.003663000020000000006100000006000110833724400000001000000000000000065200000000000000000000030000000000700807000040200100000000011102102341060463083584586100000000000000000000100000000000000020632702561193353104511548144900000221001000000100000000000000000043102111006000010000000000005804000001000000000000000020000000000015580010000000001100000000000000000510110000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAG............................................................................................................................................................................................................2412915.002915000050000000007000000001000000000000000000000000000000000000000000000000000000003000000001050020012000032100000000000101571413013946170952650000000000000000000050000000000000002222840169018810011405309136311000002919010000030200000000000000000040004323312000000000000241000236709000001100000000000000001000000000003328345000100000001025000020000000000054420620000000
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATT..........................................................................................................................................2212609.0026090000000000000000000000010001223059163601000000000000000000000000000000000000000000000020000000000200602000090000000000000115351505732121860000000000000000000020000000000000007561061251314376316249781312028470000042000000000000000000000000000000000000000000000000002000000120300000000000000000003301000210000002613283100200302003012010000000000000044631302000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTTT............................................................................................................................................................................................................2412327.00232700000000000000100000000000000000000000000000000000000000000000000000000000000000290000000000720014130000301000000000000309311010123300401474200000000000000000000100000000000000022722701150078334380270336213000002492010000200000000000000000000100000000000000000000011400004210000000700000000000000010000000000003332415200000000002033000000000000000034001000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGT...............................................................................................................................................................................................................2111999.001999000010000000000002000003000000000000000000000000000000000000000000000000000000000000000000000020000005100000000000035230090271444163550630000000000000000000020000000000000005269035002251157473064000000101102000000100000000000000000011000000000000000000001250001225010800000100000000000000100000010000000282244870010000000201100000000000000008302131313000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAATC..........................................................................................................................................................................................................2611459.0014590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000919540000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTG.............................................................................................................................................................................................................2311340.00134000003100000000300100000600000000000000000000000000000000000000000000000000000000900000000001100701000022000001000000155966018027764415113200000000000000000000000000000000000002161980180002425030066087300000900000000001000000100000000000021000000000000000000034000091104000003000000000000000000000000000030160000000000000000001000000000000410100000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAA...........................................................................................................................................................................................................2511338.001338000040000000000000100000000000000000000000000000000000000000000000000000000000001000000000001200281600007300000000000000621221901094802712929000000000000000000000000000000000000147159010200215916517311222000006530000001010000000000000000012000000000000000000000230000580100000200000000000000001000000000001821241700310000002011000000000000000001223200000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTCT............................................................................................................................................................................................................2411287.001287000010000000000000000000000000000000000010000000000000000000000000000000000000002000000000020028000000400000000000001139858330301001676115155000000000000000000000000000000000000105780560000020415000000620000000000000000000000000000200000000000000000000223000026000000000000000000000000000000000000412150020000010000000000000000000000100000000000
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATTA.........................................................................................................................................2311119.001119000010000000000000000000000256222335200000000100000000000000020000000000000000000000200000000001000706001045000000000100753429140176701131630000000000000000000000000000000000009785011622438242463396571400000020000000000000000000000000000000000110100000000000010000024010000000000000000000100000020000000956900000000003000000000000000000001400001000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGT................................................................................................................................................................................................................2011030.001030000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140010210023863500000000000000000000000000000000000045020032074908000000131010000102000000000000000000011000000000000000000019000056600000004000000000000000000001010000023182167001001010170127000000000000000026541160622000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAT...........................................................................................................................................................................................................251858.008580000000000000010001000000000103424000000000000000000000000514100000000000000000000010000000000800150000001300000100000000423020511002331418000000000000000000000000000000000000109124060001230037142099000000221000000200000000000000000000200000001000000111100000020000030300000100000000000000000000000000001271590020000000000000000000000000000000000000000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGG...............................................................................................................................................................................................................201629.006290000000000000010130000010000215457000000000000000000000000100000000000000000000000000000000000000010000200000000000000325000100140154413000000000000000000000000000000000000335803300386815921902330000062000000000000000000000000000010000000000000000000000000000300000000000000000000000000000000000000010000000000000000000000000000000200200000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGATC............................................................................................................................................................................................................241624.006240000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000464160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................231581.0058100001000000000100000000000001253510000000000000000000000009121000000000000000000000100000000004009150000222001002000000016203060301126160000000000000000000000000000000000005257035001256259180620000028000000000100000000000000000010000000000000000000000100002401000001000000000000000000000000000011140000000001000000000000000000000100000000000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................231564.0056400000000000000200010000000000000000000000000000000000000000000000000000000000000000000000001002050000120000000000000021100103011090161100000000000000000000000000000000000064860720096858121001100000033101000000000000000000000000011000000000000000000000000003000000000000000000000000000000000000011620000000000000000000000000000000100000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAAC..................................................................................................................................................................................................................181563.005630000000000000000000000080005481061337000000000000000000000010000000000000000000000000000000000000011000000000000000000054130239116471613008180000000000000000000000000000000014290111051716117523209280000066000000000000000000000000000001000000000000000000000100000000000000000000000000000000000000000001120000000000100000000000000000000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTGT............................................................................................................................................................................................................241524.005240000200000000000000000000000000000000000001000000000000000000000000000000000000050000000000140070100001320000000000002216020116010340000000000000000000000000000000000007694057006409023024000000202010000000000000000000000000110000000000000000000004000004000000030000000000000001000000200000758600000000001015000000000000000015651013000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTATA...........................................................................................................................................................................................................251463.004630000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000100702000011000000000000009110100996315581100000000000000000000000000000000000022450170081801803313980000034100000000100000000000000000000000110000000063000000100003701000001000000000000000000000000000092490000000000000100000000000000000500000000000
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATTAT........................................................................................................................................241344.0034400000000000000000000000000002700000000000000000000000000000000000000000000000000020000000000500151300102000000001000000610004010005000000000000000000000000000000000000041340570011169301210621000001000000000000000000000000000000000010001000000000000100000000000000000000000000000000000000000002100030000000001000000000000000001200000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGA...............................................................................................................................................................................................................211343.00343000030000000000000000004000000000000000000000000000000000000000000000000000000002000000000000000100000000000000000002010001217031790000000000000000000000000000000000001724090091311912901700000071000000000000000000000000000000000000000000021000000000002140100000000000000000000000000000000007231100000000001011000000000000000001600000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGCT.............................................................................................................................................................................................................231313.00313000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000008702001101201190000000000000000000000000000000000007658039002301013013300000230000000000000000000000000000000000000000000000000003000031212000000000000000000000000000000000012020000010000100000000000000000000000000000000
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGT..............................................................................................................................................................................................................201301.0030100000000000000000100000000002000000000000000000000000000100000000000000000000000000000000001000010000000000000000002680102012170100000000000000000000000000000000400009120110016210262402000000490010000101000000000000000000020000000000000000000015000066020000030000000000000000000000000000111191800000000000020000000000000000021420101000000
......................................................................................................................................................................................................................................ATTGTTTGG-CCGC--------------------CAGGA-T--TA................................................................................................................................................................211278.00278000001000000000000000000000011000000000000000000000000000452000000000000000000000000000000002000000000700000000000000811106010200100000000000000000000000000000000000017140152032921011101030500000010000000000000000000000000000000000001000000000000000000002000000000000000000000000000000000000011300010000000001000000000000000001100000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGC...............................................................................................................................................................................................................211233.0023300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121010015080370000000000000000000010000000000000003146022007507060000000046000000000000000000000000000000000000000000030000000000001900000000000000000000000000000000000021060000000000000100000000000000000100000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTA..............................................................................................................................................................................................................221232.0023200003000000000000010000000000000000000000000000000000000000000000000000000000000000000000000001020000700000000000000360102419050230000000000000000000000000000000000009140200235156320100000060000000000000000000000000000000001010010000000000000000007010000000000000000000000000000000000536130010000000000000000000000000000300000000000
droSim2
TAAT-----------------------------GTTAAT-----------------ATTGTT----------------AGTTT----T----------------------------------------AGTGACAAATCCT---------------------------------------------------GTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGG-TCAC--------------------CAGGA-T--TACTCGTTTTTGCGATCACAAATCATGAAATTGCAGCAAAA-CGCAACAAAGTCGTGGAACTAGTGAAAATATATAGAAAATAATAAGTTTTGTGTG------------------------C--TTGTGAAC--------TATAAGA-TGAATT--------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................22193609.0093609790465456160276700506973221615370192000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................23118599.00185991311260825227400188929023205863291000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGC..............................................................................................................................................................................................................22110178.001017896744821360030000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGG...............................................................................................................................................................................................................2118557.00855771694922130500468442060050000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGG..............................................................................................................................................................................................................2214327.00432739593437500111000001000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGG................................................................................................................................................................................................................2012458.0024582225816310080200000015000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTT.............................................................................................................................................................................................................231997.009978976032000110001005000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................241738.0073860615032002241060052000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGA..............................................................................................................................................................................................................221583.005834653712000509000001000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACG.................................................................................................................................................................................................................191577.00577543150140021001001000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................211329.0032997502240030000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................241312.0031215150560050161030030000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................221174.0017412101580020000001000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGAC..............................................................................................................................................................................................................221170.001701664000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAC............................................................................................................................................................................................................241160.0016013650130012001002000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTC.............................................................................................................................................................................................................231142.001421343020030000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGA...............................................................................................................................................................................................................211106.001061042000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTG.............................................................................................................................................................................................................23189.0089824120000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGT................................................................................................................................................................................................................20184.0084794100000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAAC..................................................................................................................................................................................................................18174.0074702000020000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTTT............................................................................................................................................................................................................24161.0061531040020000001000
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATC..........................................................................................................................................22157.00574410100010000100000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTATA...........................................................................................................................................................................................................25153.0053490100020000001000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGT...............................................................................................................................................................................................................21152.0052472030000000000000
......................................................................................................................................................................................................................................ATTGTTTGG-TCAC--------------------CAGGA-T--T.................................................................................................................................................................20147.0047398000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAG............................................................................................................................................................................................................24142.0042352020030000000000
......................................................................................................................................................................................................................................ATTGTTTGG-TCAC--------------------CAGGA-T--TA................................................................................................................................................................21134.0034293020000000000000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGG...............................................................................................................................................................................................................20129.0029310240010000000000
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGT..............................................................................................................................................................................................................20127.00271410110010000000000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGC..............................................................................................................................................................................................................21121.0021210000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGC...............................................................................................................................................................................................................21118.0018180000000000000000
...................................................................................................................................................................................................................TGACCGACACTAACGGGT..............................................................................................................................................................................................................18116.0016150010000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAA...........................................................................................................................................................................................................25115.001561020020001003000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGG..............................................................................................................................................................................................................21114.001490050000000000000
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................21113.0013200110000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAC...........................................................................................................................................................................................................25113.0013120100000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTATG...........................................................................................................................................................................................................25113.0013130000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGAT.............................................................................................................................................................................................................23111.0011101000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTACA...........................................................................................................................................................................................................2519.00981000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTATC...........................................................................................................................................................................................................2518.00870010000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGC................................................................................................................................................................................................................2018.00880000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACT.................................................................................................................................................................................................................1918.00880000000000000000
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATCA.........................................................................................................................................2317.00710050010000000000
..............................................................................................................................................................................................................TTTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................2317.00721040000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAT...........................................................................................................................................................................................................2516.00660000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGGT.............................................................................................................................................................................................................2315.00541000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGCC...............................................................................................................................................................................................................2115.00550000000000000000
......................................................................................................................................................................................................................................ATTGTTTGG-TCAC--------------------CAGGA-T--..................................................................................................................................................................1915.00550000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGA................................................................................................................................................................................................................2014.00440000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTACC...........................................................................................................................................................................................................2514.00440000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGCT.............................................................................................................................................................................................................2314.00440000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTA..............................................................................................................................................................................................................2214.00410010020000000000
.................................................................................................................................................................................................................TGTGACCGACACTAACGGG...............................................................................................................................................................................................................1914.00400040000000000000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTT.............................................................................................................................................................................................................2213.00330000000000000000
..................................................................................................................................................................................................................GTGACCGACACTAACGGGT..............................................................................................................................................................................................................1913.00300010000002000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTCT............................................................................................................................................................................................................2413.00330000000000000000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGA..............................................................................................................................................................................................................2113.00300030000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTAT.............................................................................................................................................................................................................2313.00330000000000000000
................................................................................................................................................................................................................TTGTGACCGACACTAACG.................................................................................................................................................................................................................1813.00300030000000000000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................2313.00300030000000000000
....................................................................................................................................................................................................................................................................................TCGTTTTTGCGATCACAAATC..........................................................................................................................................2113.00300030000000000000
..................................................................................................................................................................................................................GTGACCGACACTAACGGGTA.............................................................................................................................................................................................................2013.00300030000000000000
..............................................................................................................................................................................................................................................................................T--TACTCGTTTTTGCGATCACA..............................................................................................................................................2113.00330000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTCC............................................................................................................................................................................................................2412.00220000000000000000
...................................................................................................................................................................................................................TGACCGACACTAACGGGTA.............................................................................................................................................................................................................1912.00220000000000000000
droSec2
TTTT--------------------------AATTTTAAT-----------------ATTGTT----------------AGTTT----T----------------------------------------AGTGACAAATCCT---------------------------------------------------GTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGA-TCAC--------------------CAGGA-T--TACTCGTTTTTGCGATCACAAATCATGAAATTGCAGCAAAA-CGCAACAAATATATAGAA--------AATATATAGAAAATAATAAGTTTTGAGTG------------------------A--TTGTGAAC--------TATAAGTTTGCATTC-------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................221150177.001501771619011661141122185
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................23129058.0029058164036662211967
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGG...............................................................................................................................................................................................................2112414.0024141568343809
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................2412220.00222060421031403
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGA..............................................................................................................................................................................................................2211832.00183210815201572
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................2411776.0017762957551401
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................2111569.0015691151230395
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................2211166.00116611280038
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGG................................................................................................................................................................................................................201754.00754165251563
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGC..............................................................................................................................................................................................................221689.0068936520601
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTT.............................................................................................................................................................................................................231612.00612315260271
...............................................................................................................................................................................................................TTTGTGACCGACACTAACG.................................................................................................................................................................................................................191482.004825900423
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGT...............................................................................................................................................................................................................211333.003336861258
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGG..............................................................................................................................................................................................................221291.0029129190243
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAC............................................................................................................................................................................................................241166.001661371028
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGT..............................................................................................................................................................................................................201132.00132654063
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTTT............................................................................................................................................................................................................241131.001313020081
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATC..........................................................................................................................................221126.00126471078
................................................................................................................................................................................................................TTGTGACCGACACTAACGGG...............................................................................................................................................................................................................201107.00107106001
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATCA.........................................................................................................................................23184.0084320151
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGT................................................................................................................................................................................................................20183.00831710056
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................21172.007266105
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................23151.005145204
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTA..............................................................................................................................................................................................................22148.0048340014
..............................................................................................................................................................................................................................................................................T--TACTCGTTTTTGCGATCACA..............................................................................................................................................21143.0043260017
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAG............................................................................................................................................................................................................24139.0039191019
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAA...........................................................................................................................................................................................................25138.003843031
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTC.............................................................................................................................................................................................................23138.0038171020
....................................................................................................................................................................................................................................................................................TCGTTTTTGCGATCACAAATCA.........................................................................................................................................22135.0035170018
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGG..............................................................................................................................................................................................................21135.003535000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................23132.003226006
......................................................................................................................................................................................................................................ATTGTTTGA-TCAC--------------------CAGGA-T--TA................................................................................................................................................................21131.003185018
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATCAT........................................................................................................................................24130.003025113
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGA...............................................................................................................................................................................................................21123.002370016
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTG.............................................................................................................................................................................................................23122.002215106
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTT.............................................................................................................................................................................................................22121.002120001
......................................................................................................................................................................................................................................ATTGTTTGA-TCAC--------------------CAGGA-T--T.................................................................................................................................................................20120.002002018
...................................................................................................................................................................................................................TGACCGACACTAACGGGT..............................................................................................................................................................................................................18118.001820016
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTGT............................................................................................................................................................................................................24117.001702015
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGTA...............................................................................................................................................................................................................21117.001710007
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTATA...........................................................................................................................................................................................................25116.001630013
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAAT...........................................................................................................................................21113.00135008
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGA..............................................................................................................................................................................................................21113.00137006
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAT...........................................................................................................................................................................................................25112.001210011
..............................................................................................................................................................................................................................................................................T--TACTCGTTTTTGCGATCAC...............................................................................................................................................20111.00113008
..............................................................................................................................................................................................................TTTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................24111.001111000
....................................................................................................................................................................................................................................................................................TCGTTTTTGCGATCACAAATC..........................................................................................................................................21110.00106004
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAC............................................................................................................................................................................................................23110.001010000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGAA..............................................................................................................................................................................................................2219.0091008
....................................................................................................................................................................................................................................................................................TCGTTTTTGCGATCACAAATCAT........................................................................................................................................2319.0099000
................................................................................................................................................................................................................TTGTGACCGACACTAACGG................................................................................................................................................................................................................1918.0088000
..............................................................................................................................................................................................................TTTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................2318.0086002
................................................................................................................................................................................................................TTGTGACCGACACTAACG.................................................................................................................................................................................................................1818.0087001
.................................................................................................................................................................................................................TGTGACCGACACTAACGGG...............................................................................................................................................................................................................1917.0076001
..................................................................................................................................................................................................................GTGACCGACACTAACGGGTA.............................................................................................................................................................................................................2017.0076001
..................................................................................................................................................................................................................GTGACCGACACTAACGGGT..............................................................................................................................................................................................................1917.0076001
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTAT.............................................................................................................................................................................................................2317.0074102
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTACA...........................................................................................................................................................................................................2516.0061005
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAC...........................................................................................................................................................................................................2515.0051004
.................................................................................................................................................................................................TGTTGCAGTTTCGTTTTGTGA.............................................................................................................................................................................................................................2115.0050104
...............................................................................................................................................................................................................TTTGTGACCGACACTAAC..................................................................................................................................................................................................................1815.0055000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTATC...........................................................................................................................................................................................................2515.0051103
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAATT..........................................................................................................................................................................................................2615.0051004
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................2214.0043100
....................................................................................................................................................................................................................................................................................TCGTTTTTGCGATCACAAAT...........................................................................................................................................2014.0042002
.............................................................................................................................................................................................................GTTTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................2414.0044000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTCT............................................................................................................................................................................................................2414.0041003
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTACC...........................................................................................................................................................................................................2513.0032001
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................2213.0031002
droYak3
ACCT-------------TTAAGTGC-----------------------AGCTAGTTAGTGTTTGATTT------------------------------------------------------------TATGCCGAATCCT---------------------------------------------------GTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGG-TCGC--------------------CAGGA-T--TACTCGTTTTTGCGATCACAAATCATGAAATTGCAGCAAAA-CGCAACAAAGTCGTGAAACCAGTGA-------------ATAATCAGTTTTGTGTG------------------------C--AAGGAAAC--------TACAACTTTGCATTCTAAAATGSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................221116498.00116498105107685803801058968128400033
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................23120989.00209891800823111434665071030000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGG...............................................................................................................................................................................................................2113174.003174106397700467657100000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................2412970.002970901700010551637180000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGC..............................................................................................................................................................................................................2212740.002740143327002091061100000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................2411773.0017733112000614100260000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGA..............................................................................................................................................................................................................2211335.001335584300451772110000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGG..............................................................................................................................................................................................................2211243.001243625330017840610000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................211951.0095122720006713840000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACG.................................................................................................................................................................................................................191886.00886721450029337600000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................221742.0074267140071500000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGG................................................................................................................................................................................................................201668.00668195215009215970000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTT.............................................................................................................................................................................................................231375.003759726006518520000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTC.............................................................................................................................................................................................................231230.0023028003218710000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAC............................................................................................................................................................................................................241174.00174225800326200000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAG............................................................................................................................................................................................................241167.00167432400386200000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGG...............................................................................................................................................................................................................20197.0097194001100000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGT...............................................................................................................................................................................................................21180.008011600204030000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTTT............................................................................................................................................................................................................24167.00673300223810000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGT................................................................................................................................................................................................................20166.00665100193920000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAA...........................................................................................................................................................................................................25158.00581100164000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTG.............................................................................................................................................................................................................23156.005614600132300000
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGT..............................................................................................................................................................................................................20149.0049230008900000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTCT............................................................................................................................................................................................................24148.0048000074100000
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................21138.0038036002000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTC..............................................................................................................................................................................................................22134.0034000043000000
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATCA.........................................................................................................................................23133.0033024001800000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGAC..............................................................................................................................................................................................................22132.0032240000800000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAT...........................................................................................................................................................................................................25131.00310300121600000
......................................................................................................................................................................................................................................ATTGTTTGG-TCGC--------------------CAGGA-T--TA................................................................................................................................................................21129.0029207002000000
..............................................................................................................................................................................................................TTTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................23127.0027123001200000
..............................................................................................................................................................................................................TTTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................24124.0024024000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGCT.............................................................................................................................................................................................................23122.00221000101100000
................................................................................................................................................................................................................TTGTGACCGACACTAACGG................................................................................................................................................................................................................19122.0022022000000000
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATC..........................................................................................................................................22120.0020215000300000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTG..............................................................................................................................................................................................................22118.0018000021600000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGA...............................................................................................................................................................................................................21118.001850007600000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................23117.001719003400000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................23117.0017012001400000
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATCAT........................................................................................................................................24117.0017015000200000
......................................................................................................................................................................................................................................ATTGTTTGG-TCGC--------------------CAGGA-T--T.................................................................................................................................................................20115.0015131000100000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTA..............................................................................................................................................................................................................22115.0015110001300000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTGT............................................................................................................................................................................................................24113.001330002800000
..................................................................................................................................................................................................................GTGACCGACACTAACGGGT..............................................................................................................................................................................................................19113.001319000300000
..............................................................................................................................................................................................................................................................................T--TACTCGTTTTTGCGATCACA..............................................................................................................................................21110.001012003400000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGCC.............................................................................................................................................................................................................23110.001000001900000
..................................................................................................................................................................................................................GTGACCGACACTAACGGGTA.............................................................................................................................................................................................................20110.0010010000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTATA...........................................................................................................................................................................................................25110.001000004420000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGC...............................................................................................................................................................................................................2119.00930003300000
droEre2
ACCC-------------ATAAGTGC-----------------------AGCTGGTTAGTGCTTGATTT------------------------------------------------------------TATGGCCAATCCT---------------------------------------------------GTGTTGCAGTTTCGTTTTGTGACCGACACTAACGGGTAATTGTTTGG-CCGC--------------------CAGGA-T--TACTCGTTTTTGCGATCACAAATCATGAAATTGCAGCAAAA-CGCAACGAAG--------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................221251324.00251324349934541314215871406032
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................23168279.006827932830012598016482114261
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................2416945.00694561202696117534574
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGG...............................................................................................................................................................................................................2116922.00692245191597012416810
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................2414389.00438973101364032019740
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................2113321.003321258901370315640
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................2212559.002559245303002740
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGA..............................................................................................................................................................................................................2212112.0021122130494023611690
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGC..............................................................................................................................................................................................................2211552.00155267053601188310
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGG................................................................................................................................................................................................................2011358.00135828501090389260
...............................................................................................................................................................................................................TTTGTGACCGACACTAACG.................................................................................................................................................................................................................191984.0098411601300217170
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGG..............................................................................................................................................................................................................221869.008696202320735020
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTT.............................................................................................................................................................................................................231840.0084024602040253569
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTC.............................................................................................................................................................................................................231452.00452340159022570
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGT...............................................................................................................................................................................................................211429.00429980170242900
................................................................................................................................................................................................................TTGTGACCGACACTAACGGG...............................................................................................................................................................................................................201373.00373369000040
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAC............................................................................................................................................................................................................241304.0030418507403420
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGT..............................................................................................................................................................................................................201252.0025216001502750
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAG............................................................................................................................................................................................................241238.0023886027071180
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTG.............................................................................................................................................................................................................231199.0019927027001450
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAA...........................................................................................................................................................................................................251186.0018612046061220
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................211138.00138123050190
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTTT............................................................................................................................................................................................................241126.0012634010019630
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGT................................................................................................................................................................................................................201123.0012324010012770
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATC..........................................................................................................................................221101.00101280708580
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATCA.........................................................................................................................................23186.0086280301540
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................23182.00824001200300
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTA..............................................................................................................................................................................................................22181.0081420701310
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGG..............................................................................................................................................................................................................21181.008177010030
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAT...........................................................................................................................................................................................................25180.0080602913410
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................23160.006055020030
..............................................................................................................................................................................................................TTTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................23150.0050380101100
..............................................................................................................................................................................................................TTTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................24149.004948010000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTCT............................................................................................................................................................................................................24146.0046001200340
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGTA...............................................................................................................................................................................................................21137.0037260000110
...................................................................................................................................................................................................................TGACCGACACTAACGGGT..............................................................................................................................................................................................................18131.0031100002190
..............................................................................................................................................................................................................................................................................T--TACTCGTTTTTGCGATCACA..............................................................................................................................................21127.002790120060
................................................................................................................................................................................................................TTGTGACCGACACTAACGG................................................................................................................................................................................................................19126.002625000010
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGA...............................................................................................................................................................................................................21124.0024401000100
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTATA...........................................................................................................................................................................................................25123.002330103160
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTGT............................................................................................................................................................................................................24123.002300501170
....................................................................................................................................................................................................................................................................................TCGTTTTTGCGATCACAAATC..........................................................................................................................................21122.002216000150
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGA..............................................................................................................................................................................................................21121.002115010050
.................................................................................................................................................................................................................TGTGACCGACACTAACGGG...............................................................................................................................................................................................................19121.002121000000
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATCAT........................................................................................................................................24121.002111000190
..................................................................................................................................................................................................................GTGACCGACACTAACGGGTA.............................................................................................................................................................................................................20118.001815000120
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTT.............................................................................................................................................................................................................22116.001616000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTC..............................................................................................................................................................................................................22115.001510140000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTACA...........................................................................................................................................................................................................25114.00145020070
..................................................................................................................................................................................................................GTGACCGACACTAACGGGT..............................................................................................................................................................................................................19114.00146030050
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTATC...........................................................................................................................................................................................................25113.00130040180
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAC............................................................................................................................................................................................................23112.001212000000
................................................................................................................................................................................................................TTGTGACCGACACTAACG.................................................................................................................................................................................................................18112.00129000030
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAG...........................................................................................................................................................................................................25111.00112040050
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGCA..............................................................................................................................................................................................................22111.001100110000
dp5
GTCT-----------------------------GTG--------------------------TGACTGTGTGACCGTG---------TGGTG-------------------------------------------------GCATTCCCCTGGGACCTG-------GGACCTGGCACCTGGAACCTGGTCCCGTGCTGCAGTTTCATTTTGTGACCGACACTAACGGGTAATGGC-TGG-CC---------------------GCAGGA-C--TACTCGTTTTTGCGATCACA-ATACTGAAATTGCAGCAACG-AGCAGCGAA---------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................22176186.00761861852138829338841522329764400
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................23120543.00205432211860423111585613013571
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGG...............................................................................................................................................................................................................2116897.0068971746860108909374001280
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGC..............................................................................................................................................................................................................2212550.00255086201819064117030
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................2112399.002399119340125029933070
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGG................................................................................................................................................................................................................2011665.001665792713300354190270
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................2211176.001176011000260443030
...............................................................................................................................................................................................................TTTGTGACCGACACTAACG.................................................................................................................................................................................................................1911123.001123048509105420050
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................241860.0086001300140685150160
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGA..............................................................................................................................................................................................................221645.006451104055046220030
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTT.............................................................................................................................................................................................................231581.005815171019901981070
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................241493.0049301500320268181240
................................................................................................................................................................................................................TTGTGACCGACACTAACGGG...............................................................................................................................................................................................................201482.00482047109020000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGG..............................................................................................................................................................................................................221233.002330540811661030
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACA-ATACT........................................................................................................................................231232.0023201340530422010
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGT...............................................................................................................................................................................................................211165.001650780480354000
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGT..............................................................................................................................................................................................................201142.001421119080103010
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTC.............................................................................................................................................................................................................231107.001072280160573010
......................................................................................................................................................................................................................................ATGGC-TGG-CC---------------------GCAGGA-C--TA................................................................................................................................................................191103.0010319801012000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAC............................................................................................................................................................................................................241102.00102070021080030
................................................................................................................................................................................................................TTGTGACCGACACTAACGG................................................................................................................................................................................................................19188.008808105020000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGT................................................................................................................................................................................................................20185.0085110080579000
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................21181.008107701030000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTTT............................................................................................................................................................................................................24149.00490180100200010
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACA-ATAC.........................................................................................................................................22143.0043029011030000
....................................................................................................................................................................................................................................................................................TCGTTTTTGCGATCACA-ATACT........................................................................................................................................22142.004203206040000
..............................................................................................................................................................................................................TTTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................23140.004002906050000
................................................................................................................................................................................................................TTGTGACCGACACTAACG.................................................................................................................................................................................................................18138.003803800000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAA...........................................................................................................................................................................................................25125.002504000200010
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACA-ATA..........................................................................................................................................21124.002401601070000
.................................................................................................................................................................................................................TGTGACCGACACTAACGGG...............................................................................................................................................................................................................19124.002402301000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTG.............................................................................................................................................................................................................23123.002311401070000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTT.............................................................................................................................................................................................................22123.002301704000020
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGC..............................................................................................................................................................................................................21123.002303020000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAG............................................................................................................................................................................................................24122.00220906070000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................23122.002201800040000
..............................................................................................................................................................................................................TTTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................24121.002102001000000
..................................................................................................................................................................................................................GTGACCGACACTAACGGGT..............................................................................................................................................................................................................19121.002101604010000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGAC..............................................................................................................................................................................................................22120.002000019010000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGA...............................................................................................................................................................................................................21119.001903020140000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................23118.001801601010000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGC...............................................................................................................................................................................................................21117.001701010060000
......................................................................................................................................................................................................................................ATGGC-TGG-CC---------------------GCAGGA-C--T.................................................................................................................................................................18115.001511202000000
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACA-ATACC........................................................................................................................................23115.001501013010000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGA..............................................................................................................................................................................................................21114.001401300010000
...............................................................................................................................................................................................................TTTGTGACCGACACTAAC..................................................................................................................................................................................................................18113.00130606010000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTC..............................................................................................................................................................................................................22111.00110003080000
..................................................................................................................................................................................................................GTGACCGACACTAACGGGTA.............................................................................................................................................................................................................20111.001101100000000
.......................................................................................................................................................................................................................................TGGC-TGG-CC---------------------GCAGGA-C--TA................................................................................................................................................................18110.001001000000000
....................................................................................................................................................................................................................................................................................TCGTTTTTGCGATCACA-ATAC.........................................................................................................................................2119.0090801000000
..................................................................................................................................................................................................................GTGACCGACACTAACGGG...............................................................................................................................................................................................................1818.0080701000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTG..............................................................................................................................................................................................................2218.0080000080000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGT...............................................................................................................................................................................................................2017.0070700000000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAC............................................................................................................................................................................................................2317.0070700000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGCC..............................................................................................................................................................................................................2217.0070001060000
..............................................................................................................................................................................................................TTTTGTGACCGACACTAACGGG...............................................................................................................................................................................................................2217.0070700000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTA..............................................................................................................................................................................................................2216.0060003030000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGCT.............................................................................................................................................................................................................2316.0060000060000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGG..............................................................................................................................................................................................................2116.0060401010000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGCA..............................................................................................................................................................................................................2215.0050100040000
...................................................................................................................................................................................................................TGACCGACACTAACGGGT..............................................................................................................................................................................................................1815.0050302000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACT.................................................................................................................................................................................................................1915.0050300020000
...................................................................................................................................................................................................................TGACCGACACTAACGGGTA.............................................................................................................................................................................................................1915.0050400010000
......................................................................................................................................................................................................................................ATGGC-TGG-CC---------------------GCAGGA-C--TT................................................................................................................................................................1914.0040300010000
droPer2
GTCT-----------------------------GTG--------------------------TGACTGTGTGACCGTG---------TGGTG-------------------------------------------------GCATTCCCCTGGGACCTGGCACCTGGGACCTGGCACCTGGGACCTGGTCCCGTGCTGCAGTTTCATTTTGTGACCGACACTAACGGGTAATGGC-TGG-CC---------------------GCAGGA-C--TACTCGTTTTTGCGATCACA-ATACTGAAATTGCAGCAACG-AGCAGCGAA---------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................221103647.00103647286610244995506391373
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................23117238.00172381556017636396575
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGG...............................................................................................................................................................................................................2113448.00344881576010038556
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGC..............................................................................................................................................................................................................2212054.002054316069113368
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................2411587.00158706809855268
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGA..............................................................................................................................................................................................................2211218.001218022050667416
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................211924.00924055311731889
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................241920.0092008304224096
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGG................................................................................................................................................................................................................201707.00707024502382204
...............................................................................................................................................................................................................TTTGTGACCGACACTAACG.................................................................................................................................................................................................................191696.0069609903072900
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................221539.005390491031170
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGG..............................................................................................................................................................................................................221462.0046212801093213
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTT.............................................................................................................................................................................................................231329.0032905201521232
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTC.............................................................................................................................................................................................................231128.0012806043790
................................................................................................................................................................................................................TTGTGACCGACACTAACGGG...............................................................................................................................................................................................................201120.0012001190010
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACA-ATACT........................................................................................................................................231115.00115048021451
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGT...............................................................................................................................................................................................................21197.0097021036400
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAC............................................................................................................................................................................................................24192.0092039029240
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGT................................................................................................................................................................................................................20180.008001019591
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGT..............................................................................................................................................................................................................20179.0079036027160
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTTT............................................................................................................................................................................................................24163.006304024350
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTC..............................................................................................................................................................................................................22137.00370009280
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................21132.00320290120
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAA...........................................................................................................................................................................................................25128.002802013121
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACA-ATAC.........................................................................................................................................22125.00250200140
................................................................................................................................................................................................................TTGTGACCGACACTAACGG................................................................................................................................................................................................................19123.00230210200
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTG.............................................................................................................................................................................................................23120.00200001460
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGCC..............................................................................................................................................................................................................22120.00200005150
....................................................................................................................................................................................................................................................................................TCGTTTTTGCGATCACA-ATACT........................................................................................................................................22119.00190120340
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGCT.............................................................................................................................................................................................................23117.00170001070
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAG............................................................................................................................................................................................................24117.00170204110
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTA..............................................................................................................................................................................................................22116.00160303100
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTG..............................................................................................................................................................................................................22116.00160002140
..............................................................................................................................................................................................................TTTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................23113.0013070240
.................................................................................................................................................................................................................TGTGACCGACACTAACGGG...............................................................................................................................................................................................................19113.00130130000
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACA-ATA..........................................................................................................................................21112.0012030630
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTCT............................................................................................................................................................................................................24112.0012000660
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................23112.0012010830
..................................................................................................................................................................................................................GTGACCGACACTAACGGGT..............................................................................................................................................................................................................19111.0011070220
...............................................................................................................................................................................................................TTTGTGACCGACACTAAC..................................................................................................................................................................................................................18110.0010030250
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................2319.009060030
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAT...........................................................................................................................................................................................................2519.009000630
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGA...............................................................................................................................................................................................................2118.008010430
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGG..............................................................................................................................................................................................................2118.008010340
..............................................................................................................................................................................................................TTTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................2418.008080000
droWil2
TTGT-----------------------------GTT--------------------------TTTTTTTTTTACTGTT--------GTTTTGTGATT----------------------AT----T------TTTAA---------------------------------------------------TATCCTGTTGCAGTTTCATTTTGTGACCGACACTAACGGGTAGTAAC--GGGTTAAC----A-AAGTCGTT--TTTCTGGCCTTTTACTCGTTTTTGCGATCACAAATTCTGAAATTGCAGCAAAAGATCAACGTATA-------------------------CAACA-------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................221100531.00100531288274170101522966290
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................23113118.00131183877370759695406
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGG...............................................................................................................................................................................................................2116236.00623639831253152983
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGC..............................................................................................................................................................................................................2213164.0031642448450707
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGG................................................................................................................................................................................................................2011727.00172774813441840
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGG..............................................................................................................................................................................................................2211556.0015561296912248
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGA..............................................................................................................................................................................................................2211277.001277188291221046
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................241673.00673355352578
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................211591.005912834031219
...............................................................................................................................................................................................................TTTGTGACCGACACTAACG.................................................................................................................................................................................................................191551.005511565910335
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................241384.00384706946235
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................221366.0036623510013
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTC.............................................................................................................................................................................................................231249.00249140360073
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGT...............................................................................................................................................................................................................211148.0014812321130
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTT.............................................................................................................................................................................................................231147.00147100113132
................................................................................................................................................................................................................TTGTGACCGACACTAACGGG...............................................................................................................................................................................................................20186.0086877001
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGT..............................................................................................................................................................................................................20180.00802292047
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAG............................................................................................................................................................................................................24174.00744250027
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAC............................................................................................................................................................................................................24144.004413210010
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATT..........................................................................................................................................22138.0038430031
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGA...............................................................................................................................................................................................................21131.00311310017
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATTC.........................................................................................................................................23131.0031234004
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGAC..............................................................................................................................................................................................................22130.0030300000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTG.............................................................................................................................................................................................................23129.0029202007
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAA...........................................................................................................................................................................................................25126.0026120023
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATTCT........................................................................................................................................24120.0020124004
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................21120.0020018002
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGT................................................................................................................................................................................................................20119.0019700012
................................................................................................................................................................................................................TTGTGACCGACACTAACGG................................................................................................................................................................................................................19117.0017012005
...............................................................................................................................................................................................................TTTGTGACCGACACTAAC..................................................................................................................................................................................................................18116.0016150001
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTTT............................................................................................................................................................................................................24114.0014120011
...................................................................................................................................................................................................................TGACCGACACTAACGGGT..............................................................................................................................................................................................................18113.001344005
..................................................................................................................................................................................................................GTGACCGACACTAACGGGT..............................................................................................................................................................................................................19112.001226004
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTCA............................................................................................................................................................................................................24111.001102009
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................23111.001109002
..............................................................................................................................................................................................................TTTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................23111.001108003
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGA..............................................................................................................................................................................................................21110.001004006
.............................................................................................................................................................................................................ATTTTGTGACCGACACTAACGGG...............................................................................................................................................................................................................23110.001046000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTGT............................................................................................................................................................................................................2418.00810007
.................................................................................................................................................................................................................TGTGACCGACACTAACGGG...............................................................................................................................................................................................................1918.00808000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTA..............................................................................................................................................................................................................2218.00802006
................................................................................................................................................................................................................TTGTGACCGACACTAACG.................................................................................................................................................................................................................1817.00706001
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTACA...........................................................................................................................................................................................................2517.00711005
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................2316.00604002
..................................................................................................................................................................................................................GTGACCGACACTAACGGGTA.............................................................................................................................................................................................................2016.00606000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAGT...........................................................................................................................................................................................................2516.00602103
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTCT............................................................................................................................................................................................................2416.00602004
.............................................................................................................................................................................................................ATTTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................2415.00531001
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTCC............................................................................................................................................................................................................2415.00520003
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGAA..............................................................................................................................................................................................................2215.00500005
....................................................................................................................................................................................................................................................................................TCGTTTTTGCGATCACAAATT..........................................................................................................................................2115.00502003
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGC..............................................................................................................................................................................................................2115.00550000
...................................................................................................................................................................................................................................................AC----A-AAGTCGTT--TTTCTGGCCT....................................................................................................................................................................2115.00550000
....................................................................................................................................................................................................................................................C----A-AAGTCGTT--TTTCTGGCC.....................................................................................................................................................................1915.00550000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTATA...........................................................................................................................................................................................................2514.00421001
...............................................................................................................................................................................................................TTTGTGACCGACACTAACCC................................................................................................................................................................................................................2014.00430001
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGC...............................................................................................................................................................................................................2114.00431000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTC.............................................................................................................................................................................................................2214.00403001
....................................................................................................................................................................................................................................................C----A-AAGTCGTT--TTTCTGGCCT....................................................................................................................................................................2014.00440000
.............................................................................................................................................................................................................ATTTTGTGACCGACACTAACG.................................................................................................................................................................................................................2113.00311001
..............................................................................................................................................................................................................TTTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................2413.00303000
....................................................................................................................................................................................................................................................................................TCGTTTTTGCGATCACAAATTCT........................................................................................................................................2313.00302001
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGTA...............................................................................................................................................................................................................2113.00300003
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGCC.............................................................................................................................................................................................................2313.00310002
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGA................................................................................................................................................................................................................2013.00300003
.....................................................................................................................................................................................................................................................................................CGTTTTTGCGATCACAAATTCT........................................................................................................................................2213.00311001
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTATC...........................................................................................................................................................................................................2513.00300003
droVir3
GTGT-----------------------------TTTC--CCA-----------------GTG----------------AATCC--------------------------------------C------AATGTCGCATCCT---------------------------------------------G----TTTGTTGCAGTTTCGGTTTGTGACCGACACTAACGGGTAGTTGG---G-GCACCTCGAATA----------CGCTGTT-T--TACTCGTTTTTGCGATCACAAATTCTGAAATTGCAACGAAA-AGCAACAAGAAAA-----------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................221255753.0025575311781040618134833433226470763461614400011211886273971347292205987555114072206591232501563192891194995953795159851353820104261530000000000000000013705579923811021535100050691022374178500321
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................231109911.001099111721210160573642011962129600092476435443710561409145447606820138442619497203214808041372078839203103000775000000000011000000231253461660270378000182227921102200000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGG...............................................................................................................................................................................................................21125565.002556520013776456011041654473000107188575513886354851361043151913319452721641742751289601011000014600000000000000000120011465301710500013101327581000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................24114391.00143913252300023115071000181093973919117699926913432290067108691464203890033000007100000000000000000000782110113600000010000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................24114088.001408833919303660160200000120811228512018753865162108719530145221865549530510800810010212600000000000000000100796330285900000134000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGA..............................................................................................................................................................................................................2213513.003513141731610083052261200074398810270454813316311000661002312206300000650000000000000000010016718800000001001000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGC..............................................................................................................................................................................................................2213189.00318910912713210210150152000302015301611372947010001069490800000370000000000000000000013462100000000001000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTT.............................................................................................................................................................................................................2312804.00280491128800200204000021116719634515612521276355131241131125117207000001700000000000000000400212304700000012100000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................2112270.00227011616980012016052000332514282115153646002303723104704000001900000000000000000000129900300000100000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGG................................................................................................................................................................................................................2011855.0018553731663710120110141000232462103330202213820550114080000016000000000000000001001871900500001107300000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................2211783.001783011517003020000002417132612140163601020291963202000003000000000000000000007100000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGG..............................................................................................................................................................................................................2211555.0015559371443006014091000242113188471928100003124802000005000000000000000005004202203200001555300000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACG.................................................................................................................................................................................................................1911332.0013321441240039031400002237274727215229401001210519843148032000002500000000000000000000251200100020001200000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGG...............................................................................................................................................................................................................201661.00661016210000000000024240006300000334501000000000000000000000000002000000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTC.............................................................................................................................................................................................................231644.00644121417600901000000313132813292037762111391141804000001400000000000000000100692020000033412000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTTT............................................................................................................................................................................................................241481.00481181500120102000035312384152263666000101312729060000140000000000000000000049100100000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAA...........................................................................................................................................................................................................251385.003850140000001000050331750243003166000101510521000000000000000000000000000026000000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAC............................................................................................................................................................................................................241369.003691154001010000002722125416302294401032146519000000040000000000000000000018000100000000200000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAG............................................................................................................................................................................................................241218.00218310170010000000013910161184123500000149512000000010000000000000000000026100000000001000000
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGT..............................................................................................................................................................................................................201195.001950111500000030000234343086001005019000000010000000000000000000025100000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGT...............................................................................................................................................................................................................211140.001400215101030100004455912790100072010080000020000000000000000000032800100000000000000
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATTCT........................................................................................................................................241135.00135002900000000000326410144071600020230300000000000000000000000000002000000000000100000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGA...............................................................................................................................................................................................................211124.00124031700000000000572463249000002417020000000000000000000000000028000000000000000000
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................211110.0011001830000000000010341013400000110300000000000000000000000000004000000000000000000
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATTC.........................................................................................................................................23199.0099053500200000000105584203800000001100000000000000000000000000001002200000030200000
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATT..........................................................................................................................................22169.0069001000000000000535133205301000120100000001000000000000000000007102400000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTG.............................................................................................................................................................................................................23169.00690131000301000000222402035000002014000000030000000000000000000012000000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTCT............................................................................................................................................................................................................24168.0068007001010000003219192114000000001000000030000000000000000000013000000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTATC...........................................................................................................................................................................................................25164.006400200000000000672236061600000201700000000000000000000000000001101000010000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGCC..............................................................................................................................................................................................................22162.0062000000000000000000001301000000000000000010000000000000000000047000000000000000000
................................................................................................................................................................................................................TTGTGACCGACACTAACGG................................................................................................................................................................................................................19155.005500530000000000000000000000000001000000000000000000000000000000100000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAAC..................................................................................................................................................................................................................18152.005201100000000000034392306300000130100000000000000000000000000001000200000000000000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................23149.004900140010000000052123105201000801300000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TGTGACCGACACTAACGGG...............................................................................................................................................................................................................19149.004900440000000000000101000100000000100000000000000000000000000001000000000000000000
.............................................................................................................................................................................................................GGTTTGTGACCGACACTAACGGG...............................................................................................................................................................................................................23149.004901420000000000000000000400000010000000000000000000000000000001000000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTC..............................................................................................................................................................................................................22146.004600000000000000000000700000000000000000000000000000000000000039000000000000000000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................23141.004100250000000000011311203200000000000000002000000000000000000000000000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGT................................................................................................................................................................................................................20138.003814000301030000001100200000001101060000010000000000000000000011100000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTA..............................................................................................................................................................................................................22136.003600100000000000201100105300000000400000000000000000000000000009000000000000000000
..................................................................................................................................................................................................................GTGACCGACACTAACGGGT..............................................................................................................................................................................................................19135.003500230000000000002300000100000220000000002000000000000000000000000000000000000000
..............................................................................................................................................................................................................GTTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................23134.003400300000000000001000000200000010000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTTA............................................................................................................................................................................................................24134.00340020000100000052140102400000002400000000000000000000000000006000000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGAC..............................................................................................................................................................................................................22132.003232500000000000000000010100000000000000000000000000000000000002000000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTTC............................................................................................................................................................................................................24132.00320080000000000022110103900000110100000001000000000000000000001000000000000000000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGA..............................................................................................................................................................................................................21130.003000250000000000000000010000000000100000000000000000000000000003000000000000000000
..............................................................................................................................................................................................................GTTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................24129.002900250000000000010000000300000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGC...............................................................................................................................................................................................................21128.002803100000100000011000222000001001000000000000000000000000000011200000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTCA............................................................................................................................................................................................................24127.00270030000000000033031414300000000000000000000000000000000000002000000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTATA...........................................................................................................................................................................................................25127.00270110000000000013060300400000201400000000000000000000000000001000000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTG..............................................................................................................................................................................................................22126.002600000000000000090000100000000000000000000000000000000000000016000000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGCG..............................................................................................................................................................................................................22124.002400000001000000030000400000000000000000000000000000000000000016000000000000000000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTC.............................................................................................................................................................................................................22124.002400220000000000000000000200000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGAA..............................................................................................................................................................................................................22124.002402100101000000110100410000000000000000000000000000000000000011000000000000000000
..................................................................................................................................................................................................................GTGACCGACACTAACGGGTA.............................................................................................................................................................................................................20123.002300190000000000000000001000000210000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................TCGTTTTTGCGATCACAAATTC.........................................................................................................................................22120.002002120000000000011000200000000200000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTATCC..........................................................................................................................................................................................................26120.00200090000000000003001101400000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................TGACCGACACTAACGGGT..............................................................................................................................................................................................................18119.00190090000000000000200001000000230200000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTGT............................................................................................................................................................................................................24118.00180300000000000004101010200000000000000000000000000000000000005100000000000000000
................................................................................................................................................................................................................TTGTGACCGACACTAACG.................................................................................................................................................................................................................18118.001800140000000000000000011000000110000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGCT.............................................................................................................................................................................................................23117.001700000000000000100000001000000000000000000000000000000000000015000000000000000000
....................................................................................................................................................................................................................................................................................TCGTTTTTGCGATCACAAATTCT........................................................................................................................................23117.00170050000000000001000001100000231100000000000000000000000000000200000000000000000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGCA..............................................................................................................................................................................................................22116.00160020000000000000000050000000000000000000000000000000000000009000000000000000000
....................................................................................................................................................................................................................................................................................TCGTTTTTGCGATCACAAATT..........................................................................................................................................21115.00150040000000000001100000000000120200000001000000000000000000003000000000000000000
..............................................................................................................................................................................................................GTTTGTGACCGACACTAACGGG...............................................................................................................................................................................................................22115.001501140000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
ATAC-----------------------------ACA--------------------------TATATGTTTAGT---GAATCTGTTG--------TC----------------------AAGTG-----------TATCCT---------------------------------------------------GTGTTGCAGTTTCGGTTTGTGACCGACACTAACGGGTAGTTGA--GG-CATC-TCGTATT----------CGCTGTT-TTATACTCGTTTTTGCGATCACAAATTCTGAAATTGCAACGAAA-CGCAACGAAAATG-------------------------A---AAA-----G-------------------------------------------------------TGCATT--------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................221148678.00148678220844551666675214671
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................23122904.0022904163010275236010250
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGG...............................................................................................................................................................................................................2115428.005428353508341029030
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGA..............................................................................................................................................................................................................2212633.002633146010101411165
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................2112619.00261919610283344031
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................2211444.0014441423071400
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGC..............................................................................................................................................................................................................2211423.001423420404966110
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................2411275.0012753240390527034
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................2411131.0011312190382519011
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGG................................................................................................................................................................................................................201869.008693860182289012
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGG..............................................................................................................................................................................................................221580.0058037028824906
...............................................................................................................................................................................................................TTTGTGACCGACACTAACG.................................................................................................................................................................................................................191453.0045384017818605
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTT.............................................................................................................................................................................................................231340.00340112110711505
................................................................................................................................................................................................................TTGTGACCGACACTAACGGG...............................................................................................................................................................................................................201337.0033733302200
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTC.............................................................................................................................................................................................................231209.00209950535704
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGT..............................................................................................................................................................................................................201156.001561100172810
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGT...............................................................................................................................................................................................................211121.001212803744012
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAC............................................................................................................................................................................................................241101.001018308901
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTTT............................................................................................................................................................................................................24179.0079170322802
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................21179.00797700200
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAG............................................................................................................................................................................................................24158.0058200102602
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGT................................................................................................................................................................................................................20154.005410193103
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTATC...........................................................................................................................................................................................................25142.004225031103
................................................................................................................................................................................................................TTGTGACCGACACTAACGG................................................................................................................................................................................................................19142.00424200000
..............................................................................................................................................................................................................GTTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................23138.00383800000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGA...............................................................................................................................................................................................................21135.003510161800
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTC..............................................................................................................................................................................................................22131.00310042700
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAA...........................................................................................................................................................................................................25131.00315091700
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................23129.00292702000
....................................................................................................................................................................................................................................................................................TCGTTTTTGCGATCACAAATTC.........................................................................................................................................22125.00251901401
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTA..............................................................................................................................................................................................................22124.00241071600
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGTG..............................................................................................................................................................................................................22124.00240071700
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATTCT........................................................................................................................................24120.00201104500
..................................................................................................................................................................................................................GTGACCGACACTAACGGGT..............................................................................................................................................................................................................19119.00191503100
....................................................................................................................................................................................................................................................................................TCGTTTTTGCGATCACAAATT..........................................................................................................................................21119.00191003501
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................23119.00191800100
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTCT............................................................................................................................................................................................................24118.00182051001
..............................................................................................................................................................................................................GTTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................24118.00181800000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTG.............................................................................................................................................................................................................23118.00181105200
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTC.............................................................................................................................................................................................................22116.00161501000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGA..............................................................................................................................................................................................................21116.0016805300
..................................................................................................................................................................................................................GTGACCGACACTAACGGGTA.............................................................................................................................................................................................................20116.00161402000
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGC...............................................................................................................................................................................................................21115.0015307500
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGCTC..............................................................................................................................................................................................................22113.0013009400
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTTA............................................................................................................................................................................................................24112.0012107400
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTGT............................................................................................................................................................................................................24112.0012008202
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGCT.............................................................................................................................................................................................................23112.0012007500
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTCA............................................................................................................................................................................................................24112.0012108300
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTT.............................................................................................................................................................................................................22111.0011902000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAC............................................................................................................................................................................................................23111.00111001000
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGC..............................................................................................................................................................................................................21111.0011501500
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGGC.............................................................................................................................................................................................................23110.0010106300
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATT..........................................................................................................................................22110.0010701200
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATTC.........................................................................................................................................23110.0010701200
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGCC..............................................................................................................................................................................................................2218.008003500
droGri2
GTGT-----------------------------GTG--------------------------TGTGTGCGTGTGTGTA---------GAGTGTGTGTATATTGAAAAAGTGAAATAGTGC-----AACGTATACGAGTCCT---------------------------------------------G--TGCGTGTTGCAGTTTCGGTTTGTGACCGACACTAACGGGTAGTTAAAGGG-CATCCTCG-------CATT--CTGCTGGC-T--TACTCGTTTTTGCGATCACAAATTCTGAAATTGCAACGAAA-ATCAACAAA---------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................2313069.003069298287
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................2211292.0012921004288
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGG...............................................................................................................................................................................................................211316.003163124
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................221266.002662660
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................211108.001081080
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................24153.0053503
................................................................................................................................................................................................................TTGTGACCGACACTAACGGG...............................................................................................................................................................................................................20128.0028280
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................24127.0027270
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTT.............................................................................................................................................................................................................23126.0026233
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................21124.0024240
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGG................................................................................................................................................................................................................20121.0021201
.................................................................................................................................................................................................................TGTGACCGACACTAACGGGT..............................................................................................................................................................................................................2019.00981
...............................................................................................................................................................................................................TTTGTGACCGACACTAACG.................................................................................................................................................................................................................1918.00880
..................................................................................................................................................................................................................GTGACCGACACTAACGGGTA.............................................................................................................................................................................................................2016.00660
..............................................................................................................................................................................................................GTTTGTGACCGACACTAACGGGTA.............................................................................................................................................................................................................2415.00550
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAC............................................................................................................................................................................................................2414.00440
..............................................................................................................................................................................................................GTTTGTGACCGACACTAACGGGT..............................................................................................................................................................................................................2314.00440
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGG..............................................................................................................................................................................................................2214.00440
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTTT............................................................................................................................................................................................................2413.00330
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAT............................................................................................................................................................................................................2313.00330
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAA............................................................................................................................................................................................................2313.00330
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGA..............................................................................................................................................................................................................2213.00321
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGC..............................................................................................................................................................................................................2213.00312
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTG.............................................................................................................................................................................................................2312.00220
................................................................................................................................................................................................................TTGTGACCGACACTAACGG................................................................................................................................................................................................................1912.00220
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTATA...........................................................................................................................................................................................................2512.00220
..............................................................................................................................................................................................................GTTTGTGACCGACACTAACGGG...............................................................................................................................................................................................................2212.00220
...............................................................................................................................................................................................................TTTGTGACCGACACTAAC..................................................................................................................................................................................................................1812.00220
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTC.............................................................................................................................................................................................................2312.00220
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATTC.........................................................................................................................................2312.00220
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTATG...........................................................................................................................................................................................................2512.00220
.....................................................................................................................................................................................................................................................................................CGTTTTTGCGATCACAAATT..........................................................................................................................................2011.00101
...................................................................................................................................................................................................................TGACCGACACTAACGGGT..............................................................................................................................................................................................................1811.00110
.....................................................................................................................................................................................................................................................................................CGTTTTTGCGATCACAAATTCT........................................................................................................................................2211.00110
.....................................................................................................................................................................................................................................................................................CGTTTTTGCGATCACAAAT...........................................................................................................................................1911.00110
....................................................................................................................................................................................................................GACCGACACTAACGGGTA.............................................................................................................................................................................................................1811.00110
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTCA............................................................................................................................................................................................................2411.00110
..................................................................................................................................................................................................................GTGACCGACACTAACGGGTAT............................................................................................................................................................................................................2111.00110
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTCT............................................................................................................................................................................................................2411.00101
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAACG..........................................................................................................................................................................................................2611.00110
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTCTG...........................................................................................................................................................................................................2511.00110
...................................................................................................................................................................................................................TGACCGACACTAACGGGTA.............................................................................................................................................................................................................1911.00110
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATC..........................................................................................................................................2211.00101
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAAG...........................................................................................................................................................................................................2511.00110
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTT.............................................................................................................................................................................................................2211.00110
......................................................................................................................................................................................................................................GTTAAAGGG-CATCCTCG-------CATT--CTGCT.........................................................................................................................................................................2611.00110
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTACCA..........................................................................................................................................................................................................2611.00110
..................................................................................................................................................................................................................GTGACCGACACTAACGGGT..............................................................................................................................................................................................................1911.00110
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGGTAG............................................................................................................................................................................................................2411.00110
...............................................................................................................................................................................................................TTTGTGACCGACACTAACGGA...............................................................................................................................................................................................................2111.00110
..................................................................................................................................................................................................................GTGACCGACACTAACGGG...............................................................................................................................................................................................................1811.00110
...................................................................................................................................................................................................................................................................................CTCGTTTTTGCGATCACAAATTCT........................................................................................................................................2411.00110
................................................................................................................................................................................................................TTGTGACCGACACTAACGGGTAC............................................................................................................................................................................................................2311.00110

Generated: 10/20/2015 at 07:42 PM