ID:

dan-mir-124

 Coordinate:

scaffold_12916:3309694-3309791 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

5pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

utr5 [utr5_plus_2319]; pre_miRNA [Dana\mir-124-RM]; miRNA [Dana\miR-124-RA]

No Repeatable elements found

Sense Strand Reads

GTCTTCCCATTAAGATGGTTATGCAATCGCCTTGCCCAGAGGCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAACTACAAATGACATATTAAAAATACAAAATATATATGATTGGTGCTAATA

*********************************************************...(((((..(((.((((((.((((((..((((.((((.........))))))))..)))))).)))))).))).))))).....******************************************************** 		Read size # Mismatch Hit Count Total Norm Total V106

head

 V055

head

 M058

embryo

 M044

female body

 V105

male body		 V039

embryo
..........................................................................................................TAAGGCACGCGGTGAATGCCA....................................................................... 21 0 1 86069.00 86069 46897 34073 1830 1689 1283 297
..........................................................................................................TAAGGCACGCGGTGAATGCC........................................................................ 20 0 1 50146.00 50146 33415 14211 1236 354 883 47
..........................................................................................................TAAGGCACGCGGTGAATGC......................................................................... 19 0 1 37468.00 37468 33747 3239 74 156 250 2
..........................................................................................................TAAGGCACGCGGTGAATGCCAA...................................................................... 22 0 1 4890.00 4890 1650 2224 649 139 135 93
..........................................................................................................TAAGGCACGCGGTGAATGCCAAG..................................................................... 23 0 1 3791.00 3791 1972 1151 350 218 66 34
..........................................................................................................TAAGGCACGCGGTGAATGCCT....................................................................... 21 1 1 2160.00 2160 1131 961 5 25 37 1
..........................................................................................................TAAGGCACTCGGTGAATGCCA....................................................................... 21 1 1 693.00 693 637 32 0 18 6 0
..........................................................................................................TAAGGCACGCGGCGAATGCCA....................................................................... 21 1 1 610.00 610 169 430 4 2 4 1
..........................................................................................................TAAGGCACGCGGTGAATTCCA....................................................................... 21 1 1 537.00 537 468 64 1 0 2 2
..........................................................................................................TAAGGCACGCGGTGAATG.......................................................................... 18 0 1 511.00 511 324 172 1 8 5 1
..........................................................................................................TAAGGCACGAGGTGAATGCCA....................................................................... 21 1 1 447.00 447 339 104 0 0 4 0
..........................................................................................................TAAGGCACGCGGTGAATGCCG....................................................................... 21 1 1 445.00 445 218 207 3 5 11 1
..........................................................................................................TAAGGCACGCGGTGAATGCCC....................................................................... 21 1 1 442.00 442 90 343 1 0 4 4
..........................................................................................................TAAGGCACTCGGTGAATGC......................................................................... 19 1 1 439.00 439 435 4 0 0 0 0
..........................................................................................................TAAGGCACTCGGTGAATGCC........................................................................ 20 1 1 436.00 436 418 12 0 2 3 1
..........................................................................................................TAAGGAACGCGGTGAATGCCA....................................................................... 21 1 1 418.00 418 352 62 0 0 4 0
..........................................................................................................TAAGGCACGCGGGGAATGCCA....................................................................... 21 1 1 413.00 413 57 345 1 5 3 2
..........................................................................................................TAAGGCACGCGGTGAATGACA....................................................................... 21 1 1 396.00 396 292 97 1 0 5 1
..........................................................................................................TAAGGCACGCGGTGAATTCC........................................................................ 20 1 1 393.00 393 354 31 2 0 5 1
........................................................................GGTATCCACTGTAGGCCTATATG....................................................................................................... 23 0 1 342.00 342 216 5 95 7 2 17
..........................................................................................................TAGGGCACGCGGTGAATGCCA....................................................................... 21 1 1 330.00 330 241 81 2 2 4 0
..........................................................................................................TAAGGCACGCGGTGAATGCA........................................................................ 20 1 1 323.00 323 252 64 1 0 6 0
..........................................................................................................TAAGGCACGCGGCGAATGCC........................................................................ 20 1 1 305.00 305 98 200 4 0 3 0
..........................................................................................................TAATGCACGCGGTGAATGCCA....................................................................... 21 1 1 304.00 304 226 23 47 0 6 2
..........................................................................................................TAAGGAACGCGGTGAATGCC........................................................................ 20 1 1 299.00 299 275 24 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATTC......................................................................... 19 1 1 296.00 296 289 6 0 0 1 0
...........................................................................................................AAGGCACGCGGTGAATGCCA....................................................................... 20 0 1 288.00 288 80 67 10 130 1 0
..........................................................................................................TAAGTCACGCGGTGAATGCCA....................................................................... 21 1 1 273.00 273 233 26 3 0 10 1
..........................................................................................................TAAGGCACGAGGTGAATGCC........................................................................ 20 1 1 265.00 265 227 33 1 0 4 0
..........................................................................................................TAAGGCACGCGGTGAATGAC........................................................................ 20 1 1 259.00 259 202 41 12 0 4 0
..........................................................................................................TAAGGAACGCGGTGAATGC......................................................................... 19 1 1 255.00 255 250 5 0 0 0 0
..........................................................................................................TAGGGCACGCGGTGAATGCC........................................................................ 20 1 1 242.00 242 218 21 1 0 1 1
..........................................................................................................TAAGGCACGCGGTGCATGCCA....................................................................... 21 1 1 238.00 238 14 209 6 1 1 7
..........................................................................................................TAAGGCACGAGGTGAATGC......................................................................... 19 1 1 233.00 233 221 11 0 0 1 0
..........................................................................................................TAAGGCACGCGGAGAATGCCA....................................................................... 21 1 1 226.00 226 49 166 7 0 4 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAAA..................................................................... 23 1 1 211.00 211 103 62 38 4 2 2
..........................................................................................................TAAGGCACGCGGTGAATGCCAAGT.................................................................... 24 1 1 209.00 209 123 51 25 3 4 3
..........................................................................................................TAAGGCACGCGGTGAACGCCA....................................................................... 21 1 1 205.00 205 53 148 3 0 0 1
..........................................................................................................TAAGGCACGCGGTGAATGCCAAGA.................................................................... 24 0 1 193.00 193 116 53 9 12 3 0
..........................................................................................................TAAGGCACGCGGTGAATGA......................................................................... 19 1 1 192.00 192 174 18 0 0 0 0
..........................................................................................................TAAGGCACGCTGTGAATGCCA....................................................................... 21 1 1 190.00 190 156 28 2 0 2 2
..........................................................................................................TAAGGCACGCGGGGAATGCC........................................................................ 20 1 1 188.00 188 28 156 1 2 1 0
..........................................................................................................TAAGGCACGCGGTGGATGCCA....................................................................... 21 1 1 173.00 173 41 130 0 0 0 2
..........................................................................................................TAGGGCACGCGGTGAATGC......................................................................... 19 1 1 172.00 172 162 10 0 0 0 0
..........................................................................................................TAAGGCACGCGGTTAATGCCA....................................................................... 21 1 1 170.00 170 110 51 2 0 3 4
..........................................................................................................TAAGGCACGCGGTGAATGCT........................................................................ 20 1 1 167.00 167 75 77 5 1 9 0
..........................................................................................................TAATGCACGCGGTGAATGCC........................................................................ 20 1 1 164.00 164 120 13 28 0 3 0
..........................................................................................................TAAGGCACGCGGTGAATGT......................................................................... 19 1 1 158.00 158 120 23 0 5 10 0
..........................................................................................................CAAGGCACGCGGTGAATGCCA....................................................................... 21 1 1 156.00 156 61 88 6 0 0 1
..........................................................................................................TAAGGCACGCGGTGAGTGCCA....................................................................... 21 1 1 152.00 152 76 72 1 1 1 1
..........................................................................................................TAAGTCACGCGGTGAATGCC........................................................................ 20 1 1 152.00 152 140 11 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATCCCA....................................................................... 21 1 1 151.00 151 68 79 0 1 2 1
..........................................................................................................TAAGTCACGCGGTGAATGC......................................................................... 19 1 1 151.00 151 146 4 0 0 1 0
..........................................................................................................TAAGGCACGCTGTGAATGC......................................................................... 19 1 1 149.00 149 146 3 0 0 0 0
..........................................................................................................TAACGCACGCGGTGAATGCCA....................................................................... 21 1 1 148.00 148 34 111 0 0 2 1
..........................................................................................................TAAGGCACGCGGTGAATGTCA....................................................................... 21 1 1 145.00 145 86 56 0 0 3 0
..........................................................................................................GAAGGCACGCGGTGAATGCCA....................................................................... 21 1 1 144.00 144 4 128 6 4 0 2
..........................................................................................................TAAGGCACGTGGTGAATGCCA....................................................................... 21 1 1 144.00 144 82 56 5 0 1 0
..........................................................................................................TAAGGCACGCTGTGAATGCC........................................................................ 20 1 1 142.00 142 130 9 0 1 2 0
..........................................................................................................AAAGGCACGCGGTGAATGCCA....................................................................... 21 1 1 140.00 140 11 124 4 1 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCAA....................................................................... 21 1 1 139.00 139 93 44 1 1 0 0
..........................................................................................................TAAGGCACGCGCTGAATGCCA....................................................................... 21 1 1 137.00 137 17 109 0 0 11 0
..........................................................................................................TAAGGCACGCAGTGAATGCCA....................................................................... 21 1 1 137.00 137 89 44 1 0 3 0
..........................................................................................................TAATGCACGCGGTGAATGC......................................................................... 19 1 1 137.00 137 132 2 1 0 2 0
..........................................................................................................TAAGGCACGCGGTGAATGCTA....................................................................... 21 1 1 133.00 133 61 66 5 0 0 1
..........................................................................................................TAAGGCACACGGTGAATGCCA....................................................................... 21 1 1 133.00 133 71 34 2 24 1 1
..........................................................................................................TAAGGCACGCGGTGACTGCCA....................................................................... 21 1 1 126.00 126 20 104 0 0 2 0
..........................................................................................................TAAGGCACGCGGCGAATGC......................................................................... 19 1 1 124.00 124 86 37 0 0 1 0
..........................................................................................................TAAGGCACGCAGTGAATGCC........................................................................ 20 1 1 121.00 121 82 33 0 0 6 0
..........................................................................................................TAAGGCACGCGGTGAACGCC........................................................................ 20 1 1 118.00 118 34 84 0 0 0 0
.......................................................................TGGTATCCACTGTAGGCCTATATG....................................................................................................... 24 0 1 117.00 117 55 26 17 11 4 4
..........................................................................................................TAAGGCACGCGGTCAATGCCA....................................................................... 21 1 1 116.00 116 23 87 0 1 2 3
..........................................................................................................TAAGGCACGCGGTGAAGGCCA....................................................................... 21 1 1 113.00 113 8 102 2 0 0 1
..........................................................................................................TAAGGCACGCGGAGAATGCC........................................................................ 20 1 1 108.00 108 32 71 1 0 4 0
..........................................................................................................TAAGGCACGCGGTGCATGCC........................................................................ 20 1 1 106.00 106 9 91 5 0 0 1
..........................................................................................................TAAGGCATGCGGTGAATGCCA....................................................................... 21 1 1 104.00 104 59 41 0 0 4 0
..........................................................................................................TAAGGCACGCGGTAAATGC......................................................................... 19 1 1 104.00 104 92 9 0 0 3 0
..........................................................................................................TAAGGCAAGCGGTGAATGCCA....................................................................... 21 1 1 103.00 103 32 61 8 0 1 1
..........................................................................................................TGAGGCACGCGGTGAATGCCA....................................................................... 21 1 1 102.00 102 28 33 39 0 2 0
..........................................................................................................TAAGGCACGCGGTTAATGCC........................................................................ 20 1 1 102.00 102 81 18 1 0 2 0
..........................................................................................................TAAGACACGCGGTGAATGCCA....................................................................... 21 1 1 101.00 101 38 59 1 2 1 0
..........................................................................................................TAAGGCACGCGGTTAATGC......................................................................... 19 1 1 101.00 101 98 3 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATCCC........................................................................ 20 1 1 100.00 100 52 43 2 0 3 0
...........................................................................................................AAGGCACGCGGTGAATGCC........................................................................ 19 0 1 99.00 99 46 21 9 21 2 0
..........................................................................................................TAAGGCACACGGTGAATGCC........................................................................ 20 1 1 96.00 96 69 17 2 7 1 0
..........................................................................................................TAAGGCACGCGGTGAATACCA....................................................................... 21 1 1 96.00 96 39 53 2 2 0 0
..........................................................................................................TAAGCCACGCGGTGAATGCCA....................................................................... 21 1 1 95.00 95 45 46 0 1 3 0
.........................................................................................................CTAAGGCACGCGGTGAATGCCA....................................................................... 22 1 1 93.00 93 20 43 27 2 0 1
..........................................................................................................TAAGGCGCGCGGTGAATGCCA....................................................................... 21 1 1 90.00 90 46 39 3 2 0 0
..........................................................................................................TAAGGCACGCGGTAAATGCCA....................................................................... 21 1 1 90.00 90 41 41 3 1 3 1
..........................................................................................................TAACGCACGCGGTGAATGCC........................................................................ 20 1 1 86.00 86 14 69 0 0 3 0
..........................................................................................................TAAGGCACGCGGTGAAGGCC........................................................................ 20 1 1 84.00 84 1 83 0 0 0 0
...........................................................................................................TAAGCACGCGGTGAATGCCA....................................................................... 20 2 1 84.00 84 84 0 0 0 0 0
..........................................................................................................TAAGGTACGCGGTGAATGCCA....................................................................... 21 1 1 83.00 83 54 23 3 0 3 0
..........................................................................................................TAAGGCACGCGGTGTATGCCA....................................................................... 21 1 1 83.00 83 6 76 0 0 0 1
...........................................................................................................AAGGCACGCGGTGAATGC......................................................................... 18 0 1 80.00 80 68 1 0 11 0 0
..........................................................................................................TAAGGCACGCGGTGGATGCC........................................................................ 20 1 1 78.00 78 22 56 0 0 0 0
..........................................................................................................TAAGGCACGCGATGAATGCCA....................................................................... 21 1 1 77.00 77 44 25 0 0 6 2
..........................................................................................................TAAGGCACGTGGTGAATGCC........................................................................ 20 1 1 77.00 77 54 20 0 0 2 1
..........................................................................................................CAAGGCACGCGGTGAATGCC........................................................................ 20 1 1 76.00 76 32 36 8 0 0 0
..........................................................................................................TAAGGCATGCGGTGAATGCC........................................................................ 20 1 1 76.00 76 44 32 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAAT..................................................................... 23 1 1 76.00 76 44 19 10 1 1 1
..........................................................................................................TGAGGCACGCGGTGAATGCC........................................................................ 20 1 1 76.00 76 25 12 38 0 1 0
..........................................................................................................TAAGACACGCGGTGAATGCC........................................................................ 20 1 1 75.00 75 30 45 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAT...................................................................... 22 1 1 73.00 73 29 37 0 5 1 1
..........................................................................................................TAAGGCACACGGTGAATGC......................................................................... 19 1 1 72.00 72 68 4 0 0 0 0
..........................................................................................................TAAGGCACGCGCTGAATGCC........................................................................ 20 1 1 71.00 71 12 54 1 0 4 0
..........................................................................................................TAAGGCACGCGGGGAATGC......................................................................... 19 1 1 71.00 71 39 32 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGTC........................................................................ 20 1 1 69.00 69 35 30 2 0 2 0
..........................................................................................................TAAGGCACGCGGTGAGTGCC........................................................................ 20 1 1 68.00 68 41 26 1 0 0 0
..........................................................................................................TAAGGCACGCGGTAAATGCC........................................................................ 20 1 1 68.00 68 42 23 3 0 0 0
..........................................................................................................TAAGGCACGCGGTGAGTGC......................................................................... 19 1 1 67.00 67 63 2 1 0 1 0
..........................................................................................................TAAGGCACGCCGTGAATGCCA....................................................................... 21 1 1 65.00 65 18 39 1 0 5 2
..........................................................................................................TAAAGCACGCGGTGAATGCCA....................................................................... 21 1 1 65.00 65 26 37 0 1 1 0
..........................................................................................................TAAGGCACGCGGTCAATGCC........................................................................ 20 1 1 65.00 65 18 46 0 0 1 0
..........................................................................................................TAAGGCACGCGGTGACTGCC........................................................................ 20 1 1 63.00 63 15 46 0 0 1 1
..........................................................................................................TAAGGCACGCGGTGAATCCA........................................................................ 20 2 1 63.00 63 60 2 0 1 0 0
..........................................................................................................GAAGGCACGCGGTGAATGCC........................................................................ 20 1 1 63.00 63 4 53 4 2 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAC...................................................................... 22 1 1 62.00 62 11 39 9 1 0 2
..........................................................................................................TAAGGCACGCAGTGAATGC......................................................................... 19 1 1 62.00 62 59 3 0 0 0 0
..........................................................................................................TAAGGCAAGCGGTGAATGCC........................................................................ 20 1 1 60.00 60 22 33 5 0 0 0
..........................................................................................................TAAGGCACCCGGTGAATGCCA....................................................................... 21 1 1 60.00 60 24 17 3 15 1 0
..........................................................................................................TAAGGCACGCGATGAATGCC........................................................................ 20 1 1 58.00 58 36 14 0 0 8 0
..........................................................................................................TAAGGCACGCGGAGAATGC......................................................................... 19 1 1 57.00 57 38 18 0 1 0 0
..........................................................................................................TAAGGCATGCGGTGAATGC......................................................................... 19 1 1 56.00 56 51 5 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGGCA....................................................................... 21 1 1 54.00 54 26 27 0 0 0 1
..........................................................................................................TAAGGCACGCGGTGAAAGCCA....................................................................... 21 1 1 53.00 53 5 46 0 0 0 2
..........................................................................................................TAAGGCACGCGGTGATTGCCA....................................................................... 21 1 1 53.00 53 8 36 7 0 2 0
..........................................................................................................TAAGGCACTCGGTGAATTCCA....................................................................... 21 2 1 52.00 52 49 2 0 0 1 0
..........................................................................................................AAAGGCACGCGGTGAATGCC........................................................................ 20 1 1 51.00 51 6 40 4 0 1 0
..........................................................................................................TAACGCACGCGGTGAATGCCT....................................................................... 21 2 1 51.00 51 0 50 0 0 1 0
...........................................................................................................AAGGCACGCGGTGAATGCCAAG..................................................................... 22 0 1 51.00 51 10 12 2 27 0 0
..........................................................................................................TAAGCCACGCGGTGAATGCC........................................................................ 20 1 1 50.00 50 29 20 0 1 0 0
..........................................................................................................TAAGGCACGCGTTGAATGCCA....................................................................... 21 1 1 50.00 50 30 15 0 1 2 2
.........................................................................................................CTAAGGCACGCGGTGAATGCC........................................................................ 21 1 1 49.00 49 16 20 13 0 0 0
..........................................................................................................CAAGGCACGCGGTGAATGC......................................................................... 19 1 1 49.00 49 39 9 0 0 1 0
..........................................................................................................TAAGGCACGCGGTGAATACC........................................................................ 20 1 1 49.00 49 20 28 0 0 1 0
..........................................................................................................TAAGGCACGTGGTGAATGC......................................................................... 19 1 1 48.00 48 43 5 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAACGC......................................................................... 19 1 1 45.00 45 30 15 0 0 0 0
..........................................................................................................TAAGGCGCGCGGTGAATGCC........................................................................ 20 1 1 44.00 44 22 22 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAATGCCG....................................................................... 21 2 1 42.00 42 1 41 0 0 0 0
..........................................................................................................TAAGGCACGCGTTGAATGC......................................................................... 19 1 1 42.00 42 39 1 0 0 2 0
..........................................................................................................TAAGGCACGCGTTGAATGCC........................................................................ 20 1 1 42.00 42 26 13 0 0 3 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAAC..................................................................... 23 1 1 41.00 41 6 14 20 0 0 1
..........................................................................................................TAAGGCGCGCGGTGAATGC......................................................................... 19 1 1 41.00 41 36 5 0 0 0 0
..........................................................................................................TAAGGAACGAGGTGAATGCCA....................................................................... 21 2 1 40.00 40 35 4 0 0 1 0
..........................................................................................................TAAGGCACGCGGTGAAAGCC........................................................................ 20 1 1 38.00 38 4 33 0 0 0 1
..........................................................................................................TAAGGCAGGCGGTGAATGCCA....................................................................... 21 1 1 38.00 38 10 26 1 0 1 0
..........................................................................................................TAAGGCACTCGGTGAATTCC........................................................................ 20 2 1 37.00 37 34 3 0 0 0 0
..........................................................................................................TAAGCCACGCGGTGAATGC......................................................................... 19 1 1 37.00 37 29 7 0 0 1 0
..........................................................................................................TAAAGCACGCGGTGAATGCC........................................................................ 20 1 1 36.00 36 22 12 0 0 1 1
..........................................................................................................TAAGGCACGCGATGAATGC......................................................................... 19 1 1 36.00 36 33 3 0 0 0 0
..........................................................................................................TCAGGCACGCGGTGAATGCCA....................................................................... 21 1 1 35.00 35 15 17 0 1 1 1
..........................................................................................................TAAGGCACGCGGTGGATGC......................................................................... 19 1 1 35.00 35 24 11 0 0 0 0
..........................................................................................................TAAGGGACGCGGTGAATGCCA....................................................................... 21 1 1 34.00 34 7 23 3 0 1 0
..........................................................................................................TACGGCACGCGGTGAATGCCA....................................................................... 21 1 1 34.00 34 12 19 1 0 2 0
..........................................................................................................TAAGACACGCGGTGAATGC......................................................................... 19 1 1 33.00 33 30 3 0 0 0 0
..........................................................................................................TAAGGCACGCGGCGAATGCCAA...................................................................... 22 1 1 33.00 33 5 24 0 0 1 3
..........................................................................................................TAAGGCACGCGGTGAATGCCACG..................................................................... 23 1 1 33.00 33 0 33 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATCC......................................................................... 19 1 1 32.00 32 26 5 0 1 0 0
......................................................................CTGGTATCCACTGTAGGCCTATA......................................................................................................... 23 0 1 32.00 32 30 0 0 1 1 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAAAA.................................................................... 24 1 1 32.00 32 15 7 10 0 0 0
..........................................................................................................TAAGGCACGCGGGGAATGCCT....................................................................... 21 2 1 31.00 31 3 28 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGGC........................................................................ 20 1 1 31.00 31 11 19 1 0 0 0
..........................................................................................................TAAGGCACGCCGTGAATGCC........................................................................ 20 1 1 30.00 30 18 9 0 0 2 1
...........................................................................................................AAGGCACGCGGTGAATGCCAA...................................................................... 21 0 1 29.00 29 9 10 3 7 0 0
..........................................................................................................TAAGGCACGCGGTGTATGCC........................................................................ 20 1 1 29.00 29 3 26 0 0 0 0
..........................................................................................................TAAGGTACGCGGTGAATGC......................................................................... 19 1 1 29.00 29 23 5 0 0 1 0
..........................................................................................................TAATGCACGCGGTGAATGCCAA...................................................................... 22 1 1 29.00 29 5 1 22 0 0 1
..........................................................................................................TAAGGCACCCGGTGAATGCC........................................................................ 20 1 1 29.00 29 14 10 1 3 1 0
..........................................................................................................TAAGGCACGCGGTGAATGCGA....................................................................... 21 1 1 29.00 29 9 20 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAG...................................................................... 22 1 1 29.00 29 2 22 0 5 0 0
.........................................................................................................CTAAGGCACGCGGTGAATGC......................................................................... 20 1 1 28.00 28 22 4 1 1 0 0
..........................................................................................................TAAGGTACGCGGTGAATGCC........................................................................ 20 1 1 28.00 28 20 7 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCCA...................................................................... 22 1 1 28.00 28 4 21 0 0 0 3
..........................................................................................................TAAGGCACGCGGTCAATGC......................................................................... 19 1 1 28.00 28 17 10 0 0 1 0
..........................................................................................................TAAGGCACGCCGTGAATGC......................................................................... 19 1 1 28.00 28 25 3 0 0 0 0
............................................................................................................AGGCACGCGGTGAATGCCA....................................................................... 19 0 1 27.00 27 13 8 0 6 0 0
..........................................................................................................TAAGGCACTCGGTGAATGCCAAG..................................................................... 23 1 1 27.00 27 26 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAATGCCAA...................................................................... 22 1 1 27.00 27 3 20 3 1 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCG........................................................................ 20 1 1 27.00 27 18 8 0 0 1 0
..........................................................................................................TAAGGCACGCGGTGCATGC......................................................................... 19 1 1 27.00 27 9 18 0 0 0 0
........................................................................GTTATCCACTGTAGGCCTATATG....................................................................................................... 23 1 1 26.00 26 0 0 26 0 0 0
..........................................................................................................TAAGGCACGGGGTGAATGCCA....................................................................... 21 1 1 26.00 26 12 14 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGATTGCC........................................................................ 20 1 1 26.00 26 4 18 3 0 1 0
..........................................................................................................TAAGGCACGAGGTGAATGACA....................................................................... 21 2 1 25.00 25 22 3 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATAC......................................................................... 19 1 1 25.00 25 19 5 1 0 0 0
..........................................................................................................TAAAGCACGCGGTGAATGC......................................................................... 19 1 1 25.00 25 20 5 0 0 0 0
..........................................................................................................TGAGGCACGCGGTGAATGC......................................................................... 19 1 1 25.00 25 18 6 0 0 0 1
..........................................................................................................TAAGGCACGCGGTGCATGCCC....................................................................... 21 2 1 25.00 25 0 22 0 0 0 3
..........................................................................................................TAAGGAACGCGGTGAATGACA....................................................................... 21 2 1 25.00 25 18 7 0 0 0 0
..........................................................................................................TAAGGCAAGCGGTGAATGC......................................................................... 19 1 1 24.00 24 17 7 0 0 0 0
...........................................................................................................TAAGCACGCGGTGAATGCC........................................................................ 19 2 1 22.00 22 21 0 0 0 1 0
..........................................................................................................TAACGCACGCGGTGAATGC......................................................................... 19 1 1 22.00 22 12 10 0 0 0 0
..........................................................................................................TAAGGCACTCGGTGAATGCCT....................................................................... 21 2 1 22.00 22 17 5 0 0 0 0
..........................................................................................................TAAGGCCCGCGGTGAATGCCA....................................................................... 21 1 1 22.00 22 9 13 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAAGGC......................................................................... 19 1 1 22.00 22 3 19 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGACAAG..................................................................... 23 1 1 22.00 22 17 5 0 0 0 0
..........................................................................................................TAAGTCACTCGGTGAATGCCA....................................................................... 21 2 1 22.00 22 22 0 0 0 0 0
..........................................................................................................TAAGGCAGGCGGTGAATGCC........................................................................ 20 1 1 22.00 22 8 12 2 0 0 0
..........................................................................................................TCAGGCACGCGGTGAATGCC........................................................................ 20 1 1 22.00 22 9 11 0 0 2 0
..........................................................................................................TAAGGCACGCGCTGAATGC......................................................................... 19 1 1 22.00 22 12 8 0 0 2 0
..........................................................................................................TAAGGCACGCGGTGACTGC......................................................................... 19 1 1 21.00 21 16 5 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAAGGCCA....................................................................... 21 2 1 21.00 21 1 20 0 0 0 0
..........................................................................................................TAAGGCACGAGGTGAATGCCAAG..................................................................... 23 1 1 21.00 21 16 5 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCTA...................................................................... 22 1 1 21.00 21 6 13 0 0 2 0
........................................................................GGTATCCACTGTAGGCCTATA......................................................................................................... 21 0 1 21.00 21 12 0 5 1 0 3
..........................................................................................................TAAGGCACGCGGTGGATGCCT....................................................................... 21 2 1 20.00 20 0 20 0 0 0 0
..........................................................................................................TACGGCACGCGGTGAATGCC........................................................................ 20 1 1 20.00 20 13 6 1 0 0 0
..........................................................................................................TAAGGCACGCGGCGAATGCCAAG..................................................................... 23 1 1 20.00 20 3 15 1 0 1 0
..........................................................................................................TAAGGCACTCGGTGAATTC......................................................................... 19 2 2 20.00 40 40 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAATGACA....................................................................... 21 2 1 20.00 20 0 20 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAAAGC......................................................................... 19 1 1 20.00 20 5 15 0 0 0 0
..........................................................................................................TAAGGCACGCGGCGAATGCCT....................................................................... 21 2 1 20.00 20 4 16 0 0 0 0
..........................................................................................................TAAGGAACGCGGTGAATGCCAA...................................................................... 22 1 1 20.00 20 15 4 0 0 1 0
..........................................................................................................TAAGGCACGCGGTGAATGCCATG..................................................................... 23 1 1 19.00 19 4 15 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATTCCAAG..................................................................... 23 1 1 19.00 19 15 3 0 0 0 1
..........................................................................................................TAAGGCACGCGGTGAATT.......................................................................... 18 1 1 19.00 19 8 9 0 2 0 0
..........................................................................................................TAAGGCACGCGGCGAATGCCC....................................................................... 21 2 1 19.00 19 2 17 0 0 0 0
..........................................................................................................TAAGGCACGAGGTGAATGCCAA...................................................................... 22 1 1 19.00 19 13 6 0 0 0 0
...........................................................................................................TATGCACGCGGTGAATGCCA....................................................................... 20 2 1 18.00 18 18 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGCGAAGGCCA....................................................................... 21 2 1 18.00 18 0 18 0 0 0 0
............................................................................................................AGGCACGCGGTGAATGCC........................................................................ 18 0 1 18.00 18 10 7 0 1 0 0
..........................................................................................................TAAGGCACTCGGTGAATGCCAA...................................................................... 22 1 1 18.00 18 12 1 1 2 1 1
.......................................................................TGGTATCCACTGTAGGCCTATA......................................................................................................... 22 0 1 18.00 18 14 3 1 0 0 0
..........................................................................................................TAAGGGACGCGGTGAATGCC........................................................................ 20 1 1 18.00 18 2 15 1 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGACAA...................................................................... 22 1 1 18.00 18 11 6 0 0 0 1
..........................................................................................................TATGGCACGCGGTGAATGCC........................................................................ 20 1 1 18.00 18 9 8 0 0 1 0
..........................................................................................................TTAGGCACGCGGTGAATGCCA....................................................................... 21 1 1 18.00 18 1 9 7 0 1 0
..........................................................................................................TAAGGCACGCGGGGAATGCCAAG..................................................................... 23 1 1 18.00 18 4 12 0 1 0 1
..........................................................................................................AAAGGCACGCGGTGAATGC......................................................................... 19 1 1 17.00 17 3 14 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCATT..................................................................... 23 2 1 17.00 17 6 11 0 0 0 0
..........................................................................................................TAGGGCACGCGGTGAATGCCAA...................................................................... 22 1 1 17.00 17 10 7 0 0 0 0
..........................................................................................................TAAGGCACGCGGAGCATGCCA....................................................................... 21 2 1 17.00 17 0 17 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCGA...................................................................... 22 1 1 17.00 17 3 11 1 0 2 0
..........................................................................................................TAAGGCACGCGGGGGATGCCA....................................................................... 21 2 1 17.00 17 0 17 0 0 0 0
..........................................................................................................TATGGCACGCGGTGAATGCCA....................................................................... 21 1 1 17.00 17 5 11 0 1 0 0
..........................................................................................................TAAGGCACGCGGTGAACGCCC....................................................................... 21 2 1 17.00 17 0 16 0 0 0 1
..........................................................................................................GAAGGCACGCGGTGAATGCCAA...................................................................... 22 1 1 16.00 16 0 12 4 0 0 0
..........................................................................................................TAAGGCTCGCGGTGAATGCCA....................................................................... 21 1 1 16.00 16 11 4 0 0 1 0
..........................................................................................................TAAGGCACGCGGTGACTGCCT....................................................................... 21 2 1 16.00 16 0 16 0 0 0 0
..........................................................................................................TAAGGCACGCGGACAATGCCA....................................................................... 21 2 1 16.00 16 0 16 0 0 0 0
..........................................................................................................TAAGGCACGAGGTGAATGAC........................................................................ 20 2 1 16.00 16 13 3 0 0 0 0
........................................................................GGTATCCACTGTAGGCCTATAT........................................................................................................ 22 0 1 16.00 16 5 1 8 0 0 2
..........................................................................................................TAAGGCACGCGGGGAAAGCCA....................................................................... 21 2 1 15.00 15 0 15 0 0 0 0
..........................................................................................................GAAGGCACGCGGTGAATGC......................................................................... 19 1 1 15.00 15 2 13 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCAAAG..................................................................... 23 1 1 15.00 15 13 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGCGGATGCCA....................................................................... 21 2 1 15.00 15 0 15 0 0 0 0
..........................................................................................................TAAGGCACGGGGTGAATGCC........................................................................ 20 1 1 15.00 15 8 7 0 0 0 0
..........................................................................................................TAAGTCACTCGGTGAATGCC........................................................................ 20 2 1 15.00 15 15 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGTATGC......................................................................... 19 1 1 15.00 15 3 12 0 0 0 0
..........................................................................................................TTAGGCACGCGGTGAATGCC........................................................................ 20 1 1 15.00 15 6 4 5 0 0 0
..........................................................................................................TAAGGCACGCGGTGAACGCCT....................................................................... 21 2 1 15.00 15 1 14 0 0 0 0
..........................................................................................................TAAGGCCCGCGGTGAATGCC........................................................................ 20 1 1 15.00 15 5 10 0 0 0 0
..........................................................................................................TAAGGCACGAGGTGAATGCCT....................................................................... 21 2 1 14.00 14 7 7 0 0 0 0
..........................................................................................................TAAGGCACGCGGAGAATGCCAA...................................................................... 22 1 1 14.00 14 3 10 1 0 0 0
..........................................................................................................TAAGGCACGCGCAGAATGCCA....................................................................... 21 2 1 14.00 14 0 12 0 0 0 2
..........................................................................................................TAAGTCACGCGGTGAATGCCAA...................................................................... 22 1 1 14.00 14 10 3 1 0 0 0
..........................................................................................................TAAGGCACGCGGCGTATGCCA....................................................................... 21 2 1 14.00 14 0 14 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATTCCT....................................................................... 21 2 1 14.00 14 11 3 0 0 0 0
..........................................................................................................TAAGGCAAGCGGCGAATGCCA....................................................................... 21 2 1 14.00 14 0 14 0 0 0 0
..........................................................................................................TAATGCACGCGGTGAATGCCAAG..................................................................... 23 1 1 14.00 14 7 1 5 0 1 0
.........................................................................................................CTAAGGCACGCGGTGAATGCCAAG..................................................................... 24 1 1 14.00 14 4 2 8 0 0 0
..........................................................................................................TAAGGCACGCGGAGAATGCCC....................................................................... 21 2 1 14.00 14 0 14 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGG......................................................................... 19 1 1 14.00 14 10 3 0 0 1 0
..........................................................................................................TGAGGCACGCGGTGAATGCCAA...................................................................... 22 1 1 14.00 14 2 3 9 0 0 0
..........................................................................................................TAAGGAACGCGGTGAATGCCAAG..................................................................... 23 1 1 14.00 14 13 1 0 0 0 0
..........................................................................................................TAAGGCACGAGGTGAATGA......................................................................... 19 2 1 14.00 14 14 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGCATGCCAA...................................................................... 22 1 1 14.00 14 0 11 1 0 0 2
..........................................................................................................TAAGGAACGAGGTGAATGC......................................................................... 19 2 2 13.50 27 26 1 0 0 0 0
..........................................................................................................TAAGGAACGAGGTGAATGCC........................................................................ 20 2 1 13.00 13 11 2 0 0 0 0
...........................................................................................................TAGGCACGCGGTGAATGCCA....................................................................... 20 1 1 13.00 13 9 4 0 0 0 0
.........................................................................................................CTAAGGCACGCGGTGAATGCCAA...................................................................... 23 1 1 13.00 13 1 0 11 1 0 0
..........................................................................................................TAAGGAACGCGGTGAATGAC........................................................................ 20 2 1 13.00 13 11 2 0 0 0 0
........................................................................GGCATCCACTGTAGGCCTATATG....................................................................................................... 23 1 1 13.00 13 1 0 12 0 0 0
..........................................................................................................TAAGGCACTCGGTTAATGCCA....................................................................... 21 2 1 13.00 13 13 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCAGG..................................................................... 23 1 1 13.00 13 1 10 1 0 0 1
..........................................................................................................GAAGGCACGCGGAGAATGCCA....................................................................... 21 2 1 13.00 13 0 13 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGACTGCCAA...................................................................... 22 1 1 13.00 13 1 11 0 0 0 1
..........................................................................................................TAAGGCACGCGGTGCATGCCT....................................................................... 21 2 1 12.00 12 1 11 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGACTGCCC....................................................................... 21 2 1 12.00 12 1 11 0 0 0 0
..........................................................................................................TAACACACGCGGTGAATGCCA....................................................................... 21 2 1 12.00 12 0 12 0 0 0 0
..........................................................................................................TAAGGCACTCGGCGAATGCCA....................................................................... 21 2 1 12.00 12 6 6 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGTATGCCG....................................................................... 21 2 1 12.00 12 0 12 0 0 0 0
..........................................................................................................TAAGTCACGCGGTGAATTCCA....................................................................... 21 2 1 12.00 12 11 0 0 0 1 0
..........................................................................................................TAAGGCACCCGGTGAATGC......................................................................... 19 1 1 12.00 12 11 1 0 0 0 0
..........................................................................................................TAATGCACTCGGTGAATGCCA....................................................................... 21 2 1 12.00 12 11 1 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCCTT...................................................................... 22 2 1 12.00 12 6 6 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAATGCCC....................................................................... 21 2 1 12.00 12 0 12 0 0 0 0
..........................................................................................................TAAGGCAGGCGGTGAATGC......................................................................... 19 1 1 12.00 12 4 7 1 0 0 0
..........................................................................................................TAAGGCACGCGGAGAATGCCAAG..................................................................... 23 1 1 12.00 12 4 7 1 0 0 0
..........................................................................................................TAAGGAACGCGGTGAATGA......................................................................... 19 2 1 12.00 12 12 0 0 0 0 0
..........................................................................................................TAAGGCACGCGGCGCATGCCA....................................................................... 21 2 1 12.00 12 0 12 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATC.......................................................................... 18 1 1 12.00 12 11 1 0 0 0 0
..........................................................................................................AAAGGCACGCGGTGAATGCCC....................................................................... 21 2 1 12.00 12 0 12 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATGCTG....................................................................... 21 2 1 12.00 12 1 11 0 0 0 0
..........................................................................................................TAAGGCACGCGGTCAATGCCC....................................................................... 21 2 1 11.00 11 0 10 0 0 0 1
..........................................................................................................TAAGGCACGGGGTGAATGC......................................................................... 19 1 1 11.00 11 9 2 0 0 0 0
..........................................................................................................TAAGGCACGCGGGGAAAGCC........................................................................ 20 2 1 11.00 11 0 11 0 0 0 0
..........................................................................................................TAAGGCACGCGGTGAATTCCAA...................................................................... 22 1 1 11.00 11 8 1 0 0 1 1
..........................................................................................................TAAGGAACGCGGTGAATGCCT....................................................................... 21 2 1 11.00 11 6 4 0 0 1 0

Anti-sense strand reads

CAGAAGGGTAATTCTACCAATACGTTAGCGGAACGGGTCTCCGAAAACACAGCAAACCATGCAAAAAGAGGACCATAGGTGACATCCGGATATACATAAAGCTGGTATTCCGTGCGCCACTTACGGTTCTCGCTTGCTTTGAGATGTTTGATGTTTACTGTATAATTTTTATGTTTTATATATACTAACCACGATTAT

********************************************************...(((((..(((.((((((.((((((..((((.((((.........))))))))..)))))).)))))).))).))))).....********************************************************* 		Read size # Mismatch Hit Count Total Norm Total V039

embryo

 V055

head

 M058

embryo
.............................................................................................................................GTTCTCGATTGCTTTGAGTTG.................................................... 21 2 1 1.00 1 1 0 0
....................................GTCTCCCATGACACAGCAAA.............................................................................................................................................. 20 3 2 0.50 1 1 0 0
......................................................................................................TGGTATCCCGTGGGCCA............................................................................... 17 2 2 0.50 1 0 1 0
.............................................................................................ACCCAAAGCTGGGATTCCG...................................................................................... 19 3 13 0.08 1 0 1 0
........TAAGTCTACCACTACGCTAG.......................................................................................................................................................................... 20 3 14 0.07 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_12916:3309644-3309841 - dan-mir-124 Known_mirbase GTC---TTCCCATT-A--AGATG------------GTTATGCAA-----------------------------------------------------TCG----CCTTGCC------CAGAGGCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAACTACA-------------AATGACA---TATTA-----AA---------------------------------------AATA-CAAAATATATATGATT--G-G---T-------GC-------T-AATA
droBip1 scf7180000396737:1463463-1463661 + GTC---CTCCCATTCA--AGATG------------GTTATGCAA-----------------------------------------------------TCG----CCTCGCC------CTGAGGCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAATC--TCA-----------AACGACA---TATTA-----AA---------------------------------------AATA-AAAAATTTATTTGATT--G-G---T-------GC-------T-AAAA
droKik1 scf7180000302246:118931-119091 - TT------------C-----ATA------------ATTACGCAA-----------------------------------------------------TGA----GGACCCC------TGAAGTGTA------TATTTTGTACTGTTTTCTCCTGGTGTCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAATTCTACTGTTTACTCA---AA---------------------------------------------------------------------------AATTTAA-----------------------CTAAAAACC-AGTT
droFic1 scf7180000453855:351043-351225 + GT-----GA-----C-----GAC------------GTTATGCAA-----------------------------------------------------TGA----GTAAAGC------CCAAGTGTTCGCCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCA---AATC-----------CAAGGA----------------------------------------------------AGATAATTGATATGA----A-G---T-------GC-------TATTGT
droEle1 scf7180000491046:269578-269809 + GC-----TT-----CA--ATGTC------------GTTATGCAA-----------------------------------------------------TGA----GTAAAGC------CCAAGTGTTCCTCTTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGCTCTACAAGTTACTCAAAC----AAAAAACAAAG---CGACAAACAAAAAGTGTTTATAA-GGCCTAAAACTAAATA-CG------------------AAAATACACTAAAA-G---TGTTAAATGT-----------TA
droRho1 scf7180000758059:263-460 + GC-----CA-----C-----ATC------------GTTATGCAA-----------------------------------------------------TGA----GTAAAGC------CCAAGTGTTCCTCTTGATTGGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCA---AAGC-----------AAAT-ACAAACAAAAAGTGCTTAAAAAGGCCTA-------------------C-----AAAT-------------------AAGT-------T-------T-AAAA
droBia1 scf7180000302422:6140616-6140780 - CAG---CAG-----C-----TTT------------GTTATGCAA-----------------------------------------------------TGA----GTAAAGT------CCAAGTGTCCTCCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCA---TACC-----------CAGGAA--------------------------------------------------------------------------------------C-------C-AACA
droTak1 scf7180000415617:20654-20817 - AGT----AA-----C-----TTC------------GTTATGCAA-----------------------------------------------------TGA----GTTCAGC------CCAAGTGCCTTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATCTCTACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCA---TA---------------ATTATAAACAA------------------------------------------------------------------------------------------ACA
droEug1 scf7180000409016:190085-190277 + AT--ACTTC-----C-----GCT------------GTTATGCAA-----------------------------------------------------TGA----GTAAACC------CCAAGTGCCCTTTGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCA---GATC----------TCAACTTTAAAGAAATAGTGTTAAAA------TA-------------------------AAAT-----------------------------AA-------T-AAAA
dm3 chr2L:17566318-17566521 + dme-mir-124 Known_mirbase AGTGAGTTT-----C-----GTT--GTTACATTGCAT-----AA-----------------------------------------------------CGAC---ATAAAGC------CCAAGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCA---TACC-----------CAATAATAGACAGAAAGTGTTTAAAA--GCCTG-------------------------AAAT-----------------------------CA-------T-AATA
droSim2 2l:17125757-17126000 + dsi-mir-124 Known_mirbase AGTGAGCTT-----C-----GAC------------GTTATGCAA-----------------------------------------------------TGA----GTAAAGC------CCAAGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCA---TACC-----------CAATGATACACCGAAAGTGTTTAATA-GCCCGAAATCATAATAGCCAAATTAAAAATA-ATAAAGAAATTTGCCAGAA-G---TGTGAAGAA------------TT
droSec2 scaffold_7:1207274-1207471 + dse-mir-124 Known_mirbase AGTGAGCTT-----C-----GTC------------GTTATGCAA-----------------------------------------------------TGA----GTAAAGC------CCAAGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCA---TACC-----------CAATGATAGACAGAAA----------------------TAATAGACAAATTTC-----AAAT-----------------------------AA-------T-AAAG
droYak3 2R:3533150-3533322 - dya-mir-124 Known_mirbase GA---GTTT-----C-----GTC------------GTTATGCAA-----------------------------------------------------TGA----GTAAAGC------CCAAGTGTTCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTTCTCA---TACC-----------CAATGATAGACCAAAACTGC--------------------------------------------------------------------------------------
droEre2 scaffold_4845:6683940-6684110 - der-mir-124 Known_mirbase GA---GTTT-----C-----GTC------------GTTATGCAA-----------------------------------------------------TGA----GTAAAGC------CCAAGTGTCCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCA---TACC-----------CAATGATAGACCAAAAGT----------------------------------------------------------------------------------------
dp5 4_group3:10867610-10867760 - dps-mir-124 Known_mirbase GCC---T---------------T------------GT------A-----------------------------------------------------TGG-GGG--A-TCCATTTTTCTCAGTGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTAT---CAAAAAC----AGCAAACGAC-----------------------------------------------------------------------------------------------------------
droPer2 scaffold_8:2078707-2078857 - dpe-mir-124 Known_mirbase GCC---T---------------T------------GT------A-----------------------------------------------------TGG-GGG--A-TCCATTTTTCTCAGTGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTAT---CAAAAAC----AGCAAACGAC-----------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004577:940136-940336 - dwi-mir-124 Known_mirbase TATG----------A-----ATT------------GACATACAT-----------------------------------------------------TTT-GGAG---TGCTTTATTCTC-------AGAGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGCAGGCCTATATGTTATTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAATTCTACAAAAACC-AA---AACG-----------CAAAAATATAAAAATAAAG----------------------------------------------AAAACGGACAAAAAAGAAAATTAAATGT-------T-AACA
droVir3 scaffold_12963:16493064-16493291 + dvi-mir-124 Known_mirbase TGCGTG---CGATC-ATCAGCTGTTTTTGCATCTCATTACGCAAGTTCCGGTTTGGTGTTTTTGATGTCCTGC---CAACATTCAGGACAACATTCGTGA----GT-----------------G----CCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAATTAACAAAAAT----AACAAACGACC---TGAC----AA------------------------------------------------------------------------------------------AAA
droMoj3 scaffold_6500:21419427-21419637 + dmo-mir-124 Known_mirbase GTT---TGTGCGTC-A--A------------------TCGACAA--------------------TTGCCCTGCGCTCAGCGTGCGGGACT-CG-CCGTGA----GTGA---------------------CGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAAATCC----------AACAAGCGACC---TCTAA---AAAAAGTG---------------------------------------AAATAATTCCT---ATG--G-G---T-------AT-------T-GCGT
droGri2 scaffold_15252:13906827-13906924 + dgr-mir-124 Known_mirbase ----------------------------------------------------------------------------------------------------------------------------------GTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGTTTTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACA-------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GTC---TTCCCATT-A--AGATG------------GTTATGCAA-----------------------------------------------------TCG----CCTTGCC------CAGAGGCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAACTACA-------------AATGACA---TATTA-----AA---------------------------------------AATA-CAAAATATATATGATT--G-G---T-------GC-------T-AATASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.........................................................................................................................................................21186069.00860691689183029734073128346897
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCC..........................................................................................................................................................20150146.00501463541236471421188333415
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGC...........................................................................................................................................................19137468.0037468156742323925033747
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA........................................................................................................................................................2214890.0048901396499322241351650
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................2313791.003791218350341151661972
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.........................................................................................................................................................2112160.0021602551961371131
...........................................................................................................................................................................................TAAGGCACGCGGTGAATG............................................................................................................................................................181511.005118111725324
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.........................................................................................................................................................211445.0044553120711218
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.........................................................................................................................................................211442.00442014343490
.........................................................................................................................................................GGTATCCACTGTAGGCCTATATG.........................................................................................................................................................................................231342.003427951752216
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCA..........................................................................................................................................................201323.00323010646252
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.........................................................................................................................................................201288.0028813010067180
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.......................................................................................................................................................231211.002114382622103
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT......................................................................................................................................................241209.002093253514123
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA......................................................................................................................................................241193.001931290533116
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGA...........................................................................................................................................................191192.00192000180174
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCT..........................................................................................................................................................201167.0016715077975
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGT...........................................................................................................................................................191158.001585002310120
........................................................................................................................................................TGGTATCCACTGTAGGCCTATATG.........................................................................................................................................................................................241117.001171117426455
............................................................................................................................................................................................AAGGCACGCGGTGAATGCC..........................................................................................................................................................19199.0099219021246
............................................................................................................................................................................................AAGGCACGCGGTGAATGC...........................................................................................................................................................18180.008011001068
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.......................................................................................................................................................23176.0076110119144
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT........................................................................................................................................................22173.007350137129
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC........................................................................................................................................................22162.006219239011
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................22151.0051272012010
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.......................................................................................................................................................23141.004102011406
.......................................................................................................................................................CTGGTATCCACTGTAGGCCTATA...........................................................................................................................................................................................23132.00321000130
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA........................................................................................................................................................21129.00297301009
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG........................................................................................................................................................22129.00295002202
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCA.........................................................................................................................................................19127.00276008013
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCG..........................................................................................................................................................20127.00270008118
.........................................................................................................................................................GGTATCCACTGTAGGCCTATA...........................................................................................................................................................................................21121.00211530012
...........................................................................................................................................................................................TAAGGCACGCGGTGAATT............................................................................................................................................................18119.0019200908
.............................................................................................................................................................................................AGGCACGCGGTGAATGCC..........................................................................................................................................................18118.00181007010
........................................................................................................................................................TGGTATCCACTGTAGGCCTATA...........................................................................................................................................................................................22118.00180103014
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT.......................................................................................................................................................23117.00170001106
.........................................................................................................................................................GGTATCCACTGTAGGCCTATAT..........................................................................................................................................................................................22116.0016082105
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGG...........................................................................................................................................................19114.00140003110
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCTT........................................................................................................................................................22112.0012000606
...........................................................................................................................................................................................TAAGGCACGCGGTGAATC............................................................................................................................................................18112.00120001011
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCTG.........................................................................................................................................................21112.00120001101
droBip1
GTC---CTCCCATTCA--AGATG------------GTTATGCAA-----------------------------------------------------TCG----CCTCGCC------CTGAGGCTTTTGTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAATC--TCA-----------AACGACA---TATTA-----AA---------------------------------------AATA-AAAAATTTATTTGATT--G-G---T-------GC-------T-AAAASizeHit CountTotal NormTotal
No Reads
droKik1
TT------------C-----ATA------------ATTACGCAA-----------------------------------------------------TGA----GGACCCC------TGAAGTGTA------TATTTTGTACTGTTTTCTCCTGGTGTCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAATTCTACTGTTTACTCA---AA---------------------------------------------------------------------------AATTTAA-----------------------CTAAAAACC-AGTTSizeHit CountTotal NormTotal
No Reads
droFic1
GT-----GA-----C-----GAC------------GTTATGCAA-----------------------------------------------------TGA----GTAAAGC------CCAAGTGTTCGCCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCA---AATC-----------CAAGGA----------------------------------------------------AGATAATTGATATGA----A-G---T-------GC-------TATTGTSizeHit CountTotal NormTotal
No Reads
droEle1
GC-----TT-----CA--ATGTC------------GTTATGCAA-----------------------------------------------------TGA----GTAAAGC------CCAAGTGTTCCTCTTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGCTCTACAAGTTACTCAAAC----AAAAAACAAAG---CGACAAACAAAAAGTGTTTATAA-GGCCTAAAACTAAATA-CG------------------AAAATACACTAAAA-G---TGTTAAATGT-----------TASizeHit CountTotal NormTotal
No Reads
droRho1
GC-----CA-----C-----ATC------------GTTATGCAA-----------------------------------------------------TGA----GTAAAGC------CCAAGTGTTCCTCTTGATTGGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCA---AAGC-----------AAAT-ACAAACAAAAAGTGCTTAAAAAGGCCTA-------------------C-----AAAT-------------------AAGT-------T-------T-AAAASizeHit CountTotal NormTotal
No Reads
droBia1
CAG---CAG-----C-----TTT------------GTTATGCAA-----------------------------------------------------TGA----GTAAAGT------CCAAGTGTCCTCCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCA---TACC-----------CAGGAA--------------------------------------------------------------------------------------C-------C-AACASizeHit CountTotal NormTotal
No Reads
droTak1
AGT----AA-----C-----TTC------------GTTATGCAA-----------------------------------------------------TGA----GTTCAGC------CCAAGTGCCTTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATCTCTACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCA---TA---------------ATTATAAACAA------------------------------------------------------------------------------------------ACASizeHit CountTotal NormTotal
No Reads
droEug1
AT--ACTTC-----C-----GCT------------GTTATGCAA-----------------------------------------------------TGA----GTAAACC------CCAAGTGCCCTTTGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCA---GATC----------TCAACTTTAAAGAAATAGTGTTAAAA------TA-------------------------AAAT-----------------------------AA-------T-AAAASizeHit CountTotal NormTotal
No Reads
dm3
AGTGAGTTT-----C-----GTT--GTTACATTGCAT-----AA-----------------------------------------------------CGAC---ATAAAGC------CCAAGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCA---TACC-----------CAATAATAGACAGAAAGTGTTTAAAA--GCCTG-------------------------AAAT-----------------------------CA-------T-AATASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.........................................................................................................................................................211710203.007102030000399013672026213601581071159015093306885390018121039420136225118349578263113111000220360203012000311717205030000000000000000010211047738317236177986523241115920644915492709141996714321627493140317476832115291376088188318105516547656460810154348366496427591341209317352440513832775151996626847663336561610000000000189161592910020001604520000008012814121841693501038559244388111552591296016846902345355441921700133031041443020560432000007001420324201744392300030000200006300670487344136211185185513358251039682297020135316103032321701210015940311441304106121767340122612635068816130412444109313542146183673323713541213693230020211121115430597306100531039271271218
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA........................................................................................................................................................221237584.0023758400009583832220160517601501046134095317614401002202006205224401060100000100000020010003321736200000000000000000021223734154774255573881615723796944657184480429119608180460177013831347461891564130118641943452182199154116481620890342325771639282540130165312773116420100000000001392619287701001200400000000170006801129080150265520215716284130632000008279141000505000000110000000116133811000302000056002881282815421520012344861128020004540000000010010001101007050000054710177989321114419712456402801157096165000021011000002175612322941723104200
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCC..........................................................................................................................................................201191799.0019179900001154025352152080922111080000404424467330561877108780000001000800100000001931124900000000000000000000043915131232441001120614144188121576358171591177456719711867301313110615031111522102721514608446115248979461512110000000000262280000010000101000000004617312887011821961552219879334656179281365159212104730210140300130141000000000000017050151156011000010000220041750207741189818912192765150106888011001700001100027000000261014110100251495614861181802797869954494169960120421251112916430200503000000020304295785431844422713341117114
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGC...........................................................................................................................................................19151356.005135600000000000000684010200000020219204242543770000000000000000000002816700000000000000000000066255181106010421312034142112277641005035218621027217089127012340431721371980000000000505400000011000000000000201813480103921313112146724175580270000035960700004020000000000000150000116000001000000000019402892353291093304976149500000386000000011000000000000000000139742562521167323543517222000218401061310000000000000000172180921614276102840113110
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................23131933.003193300009140812213912947045202517000000100101856745101000000000000000000000054332200000000000000000000094121511697179242039491822181653879835169859325237124711621243131610583660558398117810011046415014119116135000000000037738123101000000000000000000405696038220102452619629113861406610010025833020000200000000000000000001117020513230000000050157914835450001434691104020001810000000010100000511010300002820158312481359437185013052330100940478000000000012000111087919301091523001500
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.........................................................................................................................................................21111343.00113430000500011001000000000000000000000000000000000000000000000000000000000000000000028202611300004151994188212511554212013212000021072201163228529410288075123129276535874300000000004020000000000000000000002126921101570051001303041000001600000000000000000000000000000000000000000000100694804261311002140170024000001600000000000000000000000000002855413117541040000003801109132000000000000000024000100000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATATG.........................................................................................................................................................................................23110344.0010344000012123084304680100000000000026214246503510000000000000000000002010000000000000000000001350710522611204280110131592710581455410125913421200032121422791040713201209049260371131410000000000210227610000000300000000000005055080622756050502214918316378000002900000000000000000000000000001000001000000000000158144010111000173307000004000100000000000000000000001164102871451475603211312110012018180000000200000000213921511000100
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.......................................................................................................................................................2319113.00911300005400435508453030011110000300000000001000000000000000000000000000000000000000000000966020686640520814110247113124742187514814618423329522231812939131419405006700901203027228380000000000817040000000000000000000001181990870014110521040900735000004010020000101000000000000000101000000000100000010056570215000018410140000012100000000000000000000010000075102708319112149000000120711000000000000000002800202000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATG............................................................................................................................................................1817444.00744400000000000000100130000402001935929430000000000000000000000100000000000000000000000159025447000416115161654122697114215739001041124217250712416010251094710000000000000100000000000000010000000213608502036459222847620000043103000010100000000000008000000300000000000000005160480300111225180000013000000000000000000000000000020911425733789321100000380313100000001000000004624431795317001000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.........................................................................................................................................................2114729.00472900004700001229301400410000000000000000000000000000000000000000000000000000000000000128002422000232519811916381914173195690050201630025098419017210907928800000000000010000000000000000000000016218201000025654421530246000006010100000000000000000000000000000000000000005100121101510930027946002500000280000000010000000000000000000132871532452102201000090670000000000000000241231112000000
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.........................................................................................................................................................2013007.00300700003000020210000010000000000000000000000000000000000000737013000000000000000000000700111600020717125102210111014223000200111263031112121350269260330826000000000000000000000000000000000000381340019000562146185097013180000020110000000000000000000000000000000000000000000000580115100071302000006000000000000000000000000000028334052321330000002022000000000000000001510111000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.........................................................................................................................................................2112959.002959000035200210231070013000010000000000000000000000000000000000000000000000000000000020710162300032152261392565266527455881301105157720260140501102401114040122180000000000000000000000000000000000001401180800093602322001910000046000000000000000000000000000100100000000000000001621036730003170070001028000000000000000000001000000031595454030531100007045000000000000000005601100000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.......................................................................................................................................................2312270.00227000001010082201100100310000200000000000000000000000000000000000000000000000000000000195714514400060226148111982014202855707270202018065690160110000101016187000000000021200000000000000000000000293902700242902901008000000580000000000000000000000000000000000000000000140015190121000790100000300000000000000000000000000001144221941621000000500400000000000000001601000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA......................................................................................................................................................2412147.002147000082000412200001000000000001423201000000000000000000000052000000000000000000010094051200013318521141520231016243200400333527010354040614011114120000000000000000000000000000000000004486051001234014704317510000002652030000204000000000000000000000010000000000000028021620001330090000011000000000000000000000000000087140788722213500000010024000000000000000022520300000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT........................................................................................................................................................2212123.0021230000132121624212303005100000000000000000000000000000000000000000000000000000000000003212015995000451161135401316173414368352207011422490190201010711023141400000000000000000000000000000000000027360211051302309043000006000000000000000000000000000000000000000000064002601500004300100000200000000000000000000000000002516153004110000005002000000000000000012010010000000
........................................................................................................................................................TGGTATCCACTGTAGGCCTATATG.........................................................................................................................................................................................2411517.0015170000400143000040000000000000000000000000000000000000000000000000000000000000000021126566000015204230012392000300005215030750204050415200000000004141360000000000000000000001526019002182170263491000000600000000000000000000000000000000000000000000000443202400005160100000900000000000000000000000000013686761032432304100000030610000000010000000017920915000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC........................................................................................................................................................2211470.00147000003200120200200110000000000000000000000000000000000000000000000000000000000000388333389000119323831310552516192100300201615801014560104110382392100000000001020000000000000000000000018150130045040101000000100000000000000000000000000000000000000000000100013902160000340200000400000000000000000000000000004371761611000000700300000000000000000300000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCA..........................................................................................................................................................2011421.001421000014200010200200110000001000000006000000000000000000000000000000000000000000000200100000001107151003430001001031101226101020140100390000000000000000000000000000000000001216040183132301311220000021000000000000000000000000000000100000000000000004101280001511805000006000000000000000000000000000050286382051011000040480000000000000000566622011000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGT...........................................................................................................................................................1911384.0013840000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000100000000020000000000000040000000000510000000000000000000000000000000000000500001519090030000030000000101000000000000040000000000000000000000000031000001850100000200000000000000000000000000002410122400000200001002000000000000000012113321011000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT......................................................................................................................................................2411280.00128000006000110200000300000000000000000000000000000000000000000000000000000000000000921233600011714124106212151112166000401002519130001220301110915700000000000010000000000000000000000020330220057171291280310000001320000000000000000000000000000000000000000000000012150124000033505000003000000000000000010000000000030373030530430000004036000000000000001017120010000000
..........................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCA.........................................................................................................................................................2211056.00105600001600019160051004000000000000000000000000000000000000000000000000000000000000030006391003114403381835152317454905004011025591100000000006034000000000000000000000000000000000000000200000300000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021110200000000000000000000000000000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG........................................................................................................................................................221738.007380000160007162810100000000000000000000000000000000000000000000000000000000000000000211415265000207393172935641128166200001115440150603100020005014000000000000000000000000000000000000620300250402030000005000000000000000000000000000000000000000000000004400300001400000002000000000000000000000000000033291200000000200000000000000000000600000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCT..........................................................................................................................................................201724.0072400005000000100000000000100000000000000000000000000000000000000000000000000000000700000001008000010000461000000000001112000050201601110000000000000000000000000000000000000613080011501408010000000910000000000000000000000000000000000000000000000010317300056402000003000000000000000000000000000023263635023001000020240000000000000000427001111000000
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCA.........................................................................................................................................................191682.00682000000000000000000000000000000000000000000000000000000003000000000000000000000001300513100311315014116171782122400000001621000300302100100000000000000000000000000000000000000018150200076090506000000280000000000000000000000000000000000000000000000053010000007050000020000000000000000000000000000111091301110000000001100000000000000000200000000000
............................................................................................................................................................................................AAGGCACGCGGTGAATGCC..........................................................................................................................................................191628.006280000000000000031000000000001000000000000000000000000000042100000000000000000000040000000000001102000190000000002002016002011050402300000000000000000000000000000000000060580260115472480410420000005600000000000000000000000000000000000000000000000000170000350400000400000000000000000000000000001620283702100000002010000000000000000002400000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGA...........................................................................................................................................................191616.0061600000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000110002000402200000000000000000000000000000000000026020007010501000000300000000000000000000000000000000000000000000000000012000003701000002000000000000000000000000000037275017000000000040320000000000000000537140100000000
..........................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCAA........................................................................................................................................................231606.006060000200175140000005000000000000000000000000000000000000000000000000000000000000092506315000040109132161113161815500000000243370100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATC.......................................................................................................................................................231551.005510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100010110000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335208000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATAT..........................................................................................................................................................................................221535.00535000010005100000000000000000100000000000000000000000000000000000000000000000000002397139774001063034000021714000101006187010000000000001200000000001107100000000000000000000027044146320645300000300000000000000000000000000000000000000000000000860020000110000000000000000000000000000000000004511611200000000001100000000000000000400000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATC......................................................................................................................................................241467.004670000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000100001000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000278180000000000000100000000000000000000000000000000000000010100000000000000000000000000000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.......................................................................................................................................................231466.004660000100032041000000000000000000000100000000000000000000000000000000000000000000061125570000082302022120346440000000115241406012000000004027000000000000200000000000000000000000460500551203020000001800000000000000000000000000000000002000000004200480000000140100000000000000000000000000000000006117932300010000100100000000000000000500000000000
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA........................................................................................................................................................211461.0046100002000001200000000000000000000000000000000000000000000114200000000000000000000077044430015165028230310319640002000074301010010022201011000000000000000000000000000000000000232201300114011050900000016000000000000000000000000000000000000000000000006300000003000000002000000000000000000000000000011220800000000000000000000000000000000000000000
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAA........................................................................................................................................................201283.002830000100000000000000000000000000000000000000000000000000001000000000000000000000016628760003053010222131911540000000061540000000000000000000000000000000000000000000000000000040100020100000000003000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATATGA........................................................................................................................................................................................241270.00270000000004010000000000000000000000000000000000000000000000000000000000000000000000120996510000010212001002000000001160050000000000000000000000000000000000000000000000000020000001100100000000000000000000000000000000000000000000000000000000230000000000000000000000000000000000000000000000000361100000000000000000000000000000000000000000
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................221258.0025800000000000000000000000000000000000000000000000000000000110000000000000000000000110460001002033010011390000000031000030000000000100000000000000000000000000000000000001510012001591110110100000003600000000000000000000000000000000000000000000000200010000110100000200000000000000000000000000002135831220000000000000000000000000000110000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCG..........................................................................................................................................................201257.0025700000000000000000000000000000000000000000000000000000000000000000000000000000000200110000006001000002500000000000000120110301060620000000000000000000000000000000000004502001120723312620000010000000000000000000000000000000000000000000000000201600000500000002000000000000000000000000000061210300100000001011000000000000000024900000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCATC........................................................................................................................................................221254.002540000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141113000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATA...........................................................................................................................................................................................211254.002540000000100000000000000000004040301000000000000000000000002000000000000000000000021015517000001001700002400000000004200110000015010220000000000202000000000000000000000006302134035007101000000000000000000000000000000000000000000000000000000850010000130100000000000000000000000000000000104526326000000000001000000000000000002101000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTAT............................................................................................................................................................................................201191.0019100000000110000000000000000020000005000000000000000000000000000000000000000000000070342700001100250000031010010000213100000000000000040000000000000000000000000000000000000170222022104645000000000000000000000000000000000000000000000000000002500000001300000000000000000000000000000000000000203300000000000000000000000000000400000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCCC........................................................................................................................................................221183.001830000000000000000000000000000000000000000000000000000000000000000000000000000000080003600000060824000010100000000002001610000000012293000000000000000000000000000000000000320100000000000000001000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
droSim2
AGTGAGCTT-----C-----GAC------------GTTATGCAA-----------------------------------------------------TGA----GTAAAGC------CCAAGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCA---TACC-----------CAATGATACACCGAAAGTGTTTAATA-GCCCGAAATCATAATAGCCAAATTAAAAATA-ATAAAGAAATTTGCCAGAA-G---TGTGAAGAA------------TTSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.........................................................................................................................................................21120419.00204198302572275231156210221031358308731312
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCC..........................................................................................................................................................2019569.009569152620849150749905915028700010
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA........................................................................................................................................................2216139.00613990153448542630234601141611601315
.........................................................................................................................................................GGTATCCACTGTAGGCCTATATG.........................................................................................................................................................................................2313611.00361110372622973170053023101000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGC...........................................................................................................................................................1912368.00236810000433221403140302202
...........................................................................................................................................................................................TAAGGCACGCGGTGAATG............................................................................................................................................................1812061.002061910126201601110400001
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................231893.0089316315446023001012157802012
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.........................................................................................................................................................201359.0035900023831800000900001
.........................................................................................................................................................GGTATCCACTGTAGGCCTATAT..........................................................................................................................................................................................221192.00192151153011100300800000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATA...........................................................................................................................................................................................211192.001923501210015000002100000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.........................................................................................................................................................211164.001641581010000000400000
........................................................................................................................................................TGGTATCCACTGTAGGCCTATATG.........................................................................................................................................................................................241140.0014058156102000002200000
.........................................................................................................................................................GGTATCCACTGTAGGCCT..............................................................................................................................................................................................181137.0013712011000600000000000
.......................................................................................................................................................CTGGTATCCACTGTAGGCCT..............................................................................................................................................................................................201109.001091081000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.......................................................................................................................................................23184.0084506300020306203000
............................................................................................................................................................................................AAGGCACGCGGTGAATGCC..........................................................................................................................................................19182.0082000237700000000000
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA........................................................................................................................................................21179.0079000237000000200101
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.........................................................................................................................................................21168.00682120000000004500000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA......................................................................................................................................................24161.006110000140313260400000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATATGA........................................................................................................................................................................................24156.0056204800000000600000
............................................................................................................................................................................................AAGGCACGCGGTGAATGC...........................................................................................................................................................18154.0054000025200000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.........................................................................................................................................................21152.00523127200000001000000
.............................................................................................................................................................TCCACTGTAGGCCTATATG.........................................................................................................................................................................................19150.0050480200000000000000
...........................................................................................................................................................TATCCACTGTAGGCCTATATG.........................................................................................................................................................................................21135.00352401100000000000000
..........................................................................................................................................................GTATCCACTGTAGGCCTATATG.........................................................................................................................................................................................22132.00321401800000000000000
......................................................................................................................................................CCTGGTATCCACTGTAGGCCT..............................................................................................................................................................................................21126.0026230300000000000000
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCA.........................................................................................................................................................19124.0024000202100000100000
.........................................................................................................................................................GGTATCCACTGTAGGCCTAT............................................................................................................................................................................................20123.002380500600000400000
..............................................................................................................................................................CCACTGTAGGCCTATATG.........................................................................................................................................................................................18121.0021200100000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT......................................................................................................................................................24116.0016200100000001300000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATATGT........................................................................................................................................................................................24115.001540900100000100000
.....................................................................................................................................................TCCTGGTATCCACTGTAGGCCT..............................................................................................................................................................................................22113.001350800000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT........................................................................................................................................................22113.001320000001000226000
.......................................................................................................................................................CTGGTATCCACTGTAGGCCC..............................................................................................................................................................................................20113.0013130000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.......................................................................................................................................................23113.001330000002100205000
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAA........................................................................................................................................................20112.0012000001200000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAA..............................................................................................................................................................16111.001100000006410000000
.........................................................................................................................................................GGTATCCACTGTAGGCCC..............................................................................................................................................................................................18111.0011110000000000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTA.............................................................................................................................................................................................19110.001030200400000100000
.......................................................................................................................................................CTGGTATCCACTGTAGGCCTAT............................................................................................................................................................................................2219.00990000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.......................................................................................................................................................2319.00910000000000800000
........................................................................................................................................................TGGTATCCACTGTAGGCCTATA...........................................................................................................................................................................................2219.00910201200000300000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT.......................................................................................................................................................2318.00800000000000017000
........................................................................................................................................................TGGTATCCACTGTAGGCCTATAT..........................................................................................................................................................................................2318.00820202200000000000
......................................................................................................................................................CCTGGTATCCACTGTAGGCCC..............................................................................................................................................................................................2117.00770000000000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATAC..........................................................................................................................................................................................2217.00710600000000000000
..............................................................................................................................................................................................GGCACGCGGTGAATGCCA.........................................................................................................................................................1817.00700000600001000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC........................................................................................................................................................2217.00700000000000700000
........................................................................................................................................................TGGTATCCACTGTAGGCCT..............................................................................................................................................................................................1916.00640000200000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATATGG........................................................................................................................................................................................2416.00600600000000000000
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGA......................................................................................................................................................2216.00600000500000100000
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................2216.00600011200000200000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG........................................................................................................................................................2216.00620110000000200000
...........................................................................................................................................................................................TAAGGCACGCGGTGA...............................................................................................................................................................1516.00600000005010000000
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG.......................................................................................................................................................2115.00500010300000100000
............................................................................................................................................................ATCCACTGTAGGCCTATATG.........................................................................................................................................................................................2015.00520300000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCT..........................................................................................................................................................2015.00530000002000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATATA.........................................................................................................................................................................................2315.00510200000000200000
...........................................................................................................................................................................................TAAGGCACGCGGTGAAT.............................................................................................................................................................1715.00500000001220000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATATT.........................................................................................................................................................................................2314.00410100000000200000
........................................................................................................................................................TGGTATCCACTGTAGGCC...............................................................................................................................................................................................1814.00420000200000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTT.............................................................................................................................................................................................1914.00440000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGA...........................................................................................................................................................1914.00400000003000001000
.........................................................................................................................................................GGTATCCACTGTAGGCCG..............................................................................................................................................................................................1814.00440000000000000000
........................................................................................................................................................TGGTATCCACTGTAGGCCTAT............................................................................................................................................................................................2114.00400000200110000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCA..........................................................................................................................................................2013.00310000000000101000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATATGC........................................................................................................................................................................................2413.00310200000000000000
.......................................................................................................................................................CTGGTATCCACTGTAGGCCG..............................................................................................................................................................................................2013.00330000000000000000
.......................................................................................................................................................CTGGTATCCACTGTAGGCCTATA...........................................................................................................................................................................................2313.00330000000000000000
..........................................................................................................................................................GTATCCACTGTAGGCCTATA...........................................................................................................................................................................................2013.00300300000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATTT...........................................................................................................................................................1922.50500000001010003000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGT...........................................................................................................................................................1912.00200000002000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATAG..........................................................................................................................................................................................2212.00200200000000000000
........................................................................................................................................................TGGTATCCACTGTAGGCCC..............................................................................................................................................................................................1912.00220000000000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATATAA........................................................................................................................................................................................2412.00200200000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATTA...........................................................................................................................................................1912.00200000000000002000
........................................................................................................................................................TGGTATCCACTGTAGGCCTATATGT........................................................................................................................................................................................2512.00200000100000001000
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGAGCG...................................................................................................................................................2512.00200000200000000000
.............................................................................................................................................................................................AGGCACGCGGTGAATGCC..........................................................................................................................................................1812.00200000200000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT......................................................................................................................................................2412.00200000001000001000
...................................................................................................................................................TCTCCTGGTATCCACTGTAGGCC...............................................................................................................................................................................................2312.00200200000000000000
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGA......................................................................................................................................................2312.00200000200000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGG...........................................................................................................................................................1911.00110000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATA.......................................................................................................................................................2311.00100000000000100000
........................................................................................................................................................TGGTATCCACTGTAGGCCTATATGA........................................................................................................................................................................................2511.00100000000000100000
.....................................................................................................................................................TCCTGGTATCCACTGTAGGCCC..............................................................................................................................................................................................2211.00100100000000000000
droSec2
AGTGAGCTT-----C-----GTC------------GTTATGCAA-----------------------------------------------------TGA----GTAAAGC------CCAAGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCA---TACC-----------CAATGATAGACAGAAA----------------------TAATAGACAAATTTC-----AAAT-----------------------------AA-------T-AAAGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.........................................................................................................................................................21199797.0099797138821622742468823
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCC..........................................................................................................................................................20144949.00449493001282126442103
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGC...........................................................................................................................................................19119485.00194855820610819113
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA........................................................................................................................................................22111729.001172911510689592549
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................2315283.00528313012222962735
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.........................................................................................................................................................2111002.00100214199960
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.......................................................................................................................................................231463.0046396237211
.........................................................................................................................................................GGTATCCACTGTAGGCCTATATG.........................................................................................................................................................................................231461.0046113339946
...........................................................................................................................................................................................TAAGGCACGCGGTGAATG............................................................................................................................................................181380.00380823367
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA......................................................................................................................................................241291.0029141342232
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.........................................................................................................................................................201283.00283136333111
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT......................................................................................................................................................241225.002252653164
........................................................................................................................................................TGGTATCCACTGTAGGCCTATATG.........................................................................................................................................................................................241212.002124413371
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCA..........................................................................................................................................................201196.00196155185
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.......................................................................................................................................................231135.00135314883
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.........................................................................................................................................................211134.00134333791
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.........................................................................................................................................................211133.00133014092
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT........................................................................................................................................................221114.0011491599
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGT...........................................................................................................................................................191111.00111090102
............................................................................................................................................................................................AAGGCACGCGGTGAATGCC..........................................................................................................................................................19188.0088200068
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGA...........................................................................................................................................................19165.006516058
.........................................................................................................................................................GGTATCCACTGTAGGCCTATA...........................................................................................................................................................................................21155.0055003124
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCT..........................................................................................................................................................20154.005412051
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCA.........................................................................................................................................................19145.0045901125
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................22136.0036801216
............................................................................................................................................................................................AAGGCACGCGGTGAATGC...........................................................................................................................................................18134.003460028
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT.......................................................................................................................................................23133.003313029
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG.......................................................................................................................................................21132.003220525
........................................................................................................................................................TGGTATCCACTGTAGGCCTATA...........................................................................................................................................................................................22129.0029011414
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC........................................................................................................................................................22128.002810819
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.......................................................................................................................................................23127.0027101511
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA........................................................................................................................................................21124.002414055
.............................................................................................................................................................................................AGGCACGCGGTGAATGCC..........................................................................................................................................................18120.002000020
...........................................................................................................................................................................................TAAGGCACGCGGTGAATT............................................................................................................................................................18120.002000020
.........................................................................................................................................................GGTATCCACTGTAGGCCTATAT..........................................................................................................................................................................................22119.001910153
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG........................................................................................................................................................22119.00190199
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGT......................................................................................................................................................22119.001900514
........................................................................................................................................................TGGTATCCACTGTAGGCCTATAT..........................................................................................................................................................................................23115.00150087
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC......................................................................................................................................................24115.001500312
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCG..........................................................................................................................................................20111.00110119
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGA......................................................................................................................................................22111.00110038
.........................................................................................................................................................GGTATCCACTGTAGGCCTATATGA........................................................................................................................................................................................24110.001000100
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT......................................................................................................................................................2418.0080224
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGTT.....................................................................................................................................................2518.0080008
........................................................................................................................................................TGGTATCCACTGTAGGCCTAT............................................................................................................................................................................................2118.0081052
.........................................................................................................................................................GGTATCCACTGTAGGCCTAT............................................................................................................................................................................................2018.0080062
.......................................................................................................................................................CTGGTATCCACTGTAGGCCTATA...........................................................................................................................................................................................2317.0070106
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATA.......................................................................................................................................................2317.0070007
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAA........................................................................................................................................................2016.0060006
........................................................................................................................................................TGGTATCCACTGTAGGCCTA.............................................................................................................................................................................................2016.0060015
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGG......................................................................................................................................................2415.0051004
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGTT..........................................................................................................................................................2015.0050005
droYak3
GA---GTTT-----C-----GTC------------GTTATGCAA-----------------------------------------------------TGA----GTAAAGC------CCAAGTGTTCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTTCTCA---TACC-----------CAATGATAGACCAAAACTGC--------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.........................................................................................................................................................211142288.0014228815938099452392640696835516901220
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCC..........................................................................................................................................................20140745.0040745258518535631811212227872950010
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA........................................................................................................................................................22114074.00140741424258223893124928073033110
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................2314473.004473914317155996231365181000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGC...........................................................................................................................................................1914095.0040951377240212662463340000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.........................................................................................................................................................2112757.002757202433416228200000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.........................................................................................................................................................2111903.0019031716226433140720000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATATG.........................................................................................................................................................................................2311797.0017976938820245151600000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.......................................................................................................................................................231830.008302144381068318410020
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.........................................................................................................................................................201568.0056803693933212410000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.........................................................................................................................................................211566.0056673101110443100000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.......................................................................................................................................................231267.00267051468386910000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC........................................................................................................................................................221215.002150462202310500100
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA......................................................................................................................................................241189.0018916522329600000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.......................................................................................................................................................231168.0016800129492510000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATG............................................................................................................................................................181163.0016323634610120000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT......................................................................................................................................................241157.0015711677255510000
........................................................................................................................................................TGGTATCCACTGTAGGCCTATATG.........................................................................................................................................................................................241150.0015017480318910000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT........................................................................................................................................................221139.00139011114397310000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATA...........................................................................................................................................................................................211106.0010614072200000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCT..........................................................................................................................................................201100.0010001111226410000
............................................................................................................................................................................................AAGGCACGCGGTGAATGCC..........................................................................................................................................................19198.0098046121102900000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCA..........................................................................................................................................................20175.00750130244700000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATAT..........................................................................................................................................................................................22159.005915027170000000
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA........................................................................................................................................................21158.00580202072900000
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCA.........................................................................................................................................................19153.00530234061910000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG........................................................................................................................................................22149.0049032593000000
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................22139.00392129331000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT.......................................................................................................................................................23123.0023013081100000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCACA.......................................................................................................................................................23121.0021002321400000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCG..........................................................................................................................................................20121.0021000051600000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC......................................................................................................................................................24118.0018001402200000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGA...........................................................................................................................................................19118.0018010071000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCTT.........................................................................................................................................................21118.0018001001700000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATATGT........................................................................................................................................................................................24117.001761820000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCAC.........................................................................................................................................................21117.0017000141200000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGT...........................................................................................................................................................19115.0015000031200000
droEre2
GA---GTTT-----C-----GTC------------GTTATGCAA-----------------------------------------------------TGA----GTAAAGC------CCAAGTGTCCTTCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCA---TACC-----------CAATGATAGACCAAAAGT----------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.........................................................................................................................................................211303392.003033923542220183393243054892063370
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCC..........................................................................................................................................................20175048.00750484671056107352141677608990
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGC...........................................................................................................................................................19112704.001270455432661191121480
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA........................................................................................................................................................22112519.00125195147613124125028565850
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................2315016.00501633431980521912432150
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.........................................................................................................................................................2111841.0018412115604602320
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.........................................................................................................................................................2111661.00166112152841810980
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.......................................................................................................................................................231810.00810294912338205510
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.........................................................................................................................................................201779.0077925711133353700
.........................................................................................................................................................GGTATCCACTGTAGGCCTATATG.........................................................................................................................................................................................231688.00688171325312263580
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCA..........................................................................................................................................................201551.005510041055050
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.........................................................................................................................................................211494.00494192220742420
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA......................................................................................................................................................241313.00313912523122250
...........................................................................................................................................................................................TAAGGCACGCGGTGAATG............................................................................................................................................................181210.00210100173111690
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.......................................................................................................................................................231210.0021061731231510
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT......................................................................................................................................................241199.0019971327651410
............................................................................................................................................................................................AAGGCACGCGGTGAATGCC..........................................................................................................................................................191164.0016431114101170
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT........................................................................................................................................................221145.001451013441950
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCA.........................................................................................................................................................191132.001321812401880
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC........................................................................................................................................................221124.001242107280320
........................................................................................................................................................TGGTATCCACTGTAGGCCTATATG.........................................................................................................................................................................................241122.00122687131870
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.......................................................................................................................................................23199.00990221021640
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA........................................................................................................................................................21170.0070432920140
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCT..........................................................................................................................................................20159.0059011302430
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGA...........................................................................................................................................................19153.005300100520
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG........................................................................................................................................................22148.0048521621220
.........................................................................................................................................................GGTATCCACTGTAGGCCTATA...........................................................................................................................................................................................21143.004339080230
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................22140.0040181510150
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCAC.........................................................................................................................................................21136.003600331020
.............................................................................................................................................................................................AGGCACGCGGTGAATGCC..........................................................................................................................................................18129.002910300250
............................................................................................................................................................................................AAGGCACGCGGTGAATGC...........................................................................................................................................................18125.002500100240
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT.......................................................................................................................................................23123.002310601150
.........................................................................................................................................................GGTATCCACTGTAGGCCTATAT..........................................................................................................................................................................................22122.002214160100
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGT...........................................................................................................................................................19121.002100002190
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG.......................................................................................................................................................21120.002020311130
........................................................................................................................................................TGGTATCCACTGTAGGCCTATA...........................................................................................................................................................................................22116.001600020140
.........................................................................................................................................................GGTATCCACTGTAGGCCTAT............................................................................................................................................................................................20115.00151212090
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGT......................................................................................................................................................22114.001410201100
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCG..........................................................................................................................................................20112.00120060150
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC......................................................................................................................................................24112.00120301080
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAA........................................................................................................................................................20111.00111102070
dp5
GCC---T---------------T------------GT------A-----------------------------------------------------TGG-GGG--A-TCCATTTTTCTCAGTGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTAT---CAAAAAC----AGCAAACGAC-----------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.........................................................................................................................................................21149140.004914033959211850993038344324580033
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................23120538.002053803094457824654518555712610199
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCC..........................................................................................................................................................20113545.0013545169761663382075470215001
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA........................................................................................................................................................2217820.0078200331117237822703599190051
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT......................................................................................................................................................2411723.00172301103497267244021005
........................................................................................................................................................TGGTATCCACTGTAGGCCTATATG.........................................................................................................................................................................................2411271.0012711127281423461202000334
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGC...........................................................................................................................................................191933.009330132404614252340010
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.........................................................................................................................................................211619.006192512193123545000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATATG.........................................................................................................................................................................................231610.00610116198619414020179
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA......................................................................................................................................................241593.0059305287252241714003
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.........................................................................................................................................................201502.00502034423751131000
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................221421.004210283162245512002
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.........................................................................................................................................................211295.0029502145232240000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC......................................................................................................................................................241210.00210046211912130000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.......................................................................................................................................................231178.00178018582330432004
............................................................................................................................................................................................AAGGCACGCGGTGAATGCC..........................................................................................................................................................191120.001200632400150000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.......................................................................................................................................................231111.001110068236140000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.........................................................................................................................................................211110.00110016915790000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC........................................................................................................................................................22194.00940433155370000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.......................................................................................................................................................23187.00870423266280000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT........................................................................................................................................................22178.00780111237350001
...........................................................................................................................................................................................TAAGGCACGCGGTGAATG............................................................................................................................................................18169.0069013343382006
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA........................................................................................................................................................21156.0056029345131001
........................................................................................................................................................TGGTATCCACTGTAGGCCTATAT..........................................................................................................................................................................................23151.0051031118710020
........................................................................................................................................................TGGTATCCACTGTAGGCCTATA...........................................................................................................................................................................................22150.0050041012610008
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT.......................................................................................................................................................23141.0041071160170000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCT..........................................................................................................................................................20138.0038021221120000
........................................................................................................................................................TGGTATCCACTGTAGGCCTA.............................................................................................................................................................................................20135.003506011240003
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGT......................................................................................................................................................23134.0034012316120000
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCA.........................................................................................................................................................19133.003302300280000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGTT.....................................................................................................................................................25132.0032042140120000
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG.......................................................................................................................................................21128.002801401760000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG........................................................................................................................................................22127.00270346680000
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGT......................................................................................................................................................22127.002704273101000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATA...........................................................................................................................................................................................21125.002500701500003
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCA..........................................................................................................................................................20121.002102010171000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT......................................................................................................................................................24120.002001211060000
............................................................................................................................................................................................AAGGCACGCGGTGAATGC...........................................................................................................................................................18119.001901008010000
........................................................................................................................................................TGGTATCCACTGTAGGCCTATATGA........................................................................................................................................................................................25119.001902101100005
.........................................................................................................................................................GGTATCCACTGTAGGCCTATATGA........................................................................................................................................................................................24119.00190210800008
........................................................................................................................................................TGGTATCCACTGTAGGCCTAT............................................................................................................................................................................................21116.00160511540000
.........................................................................................................................................................GGTATCCACTGTAGGCCTATAT..........................................................................................................................................................................................22116.00160141610003
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGT...........................................................................................................................................................19115.00150703041000
........................................................................................................................................................TGGTATCCACTGTAGGCCT..............................................................................................................................................................................................19113.00130301080001
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAA........................................................................................................................................................20111.00110500240000
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGA......................................................................................................................................................23110.00100702010000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGG......................................................................................................................................................24110.00100423010000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCACT.......................................................................................................................................................2319.0090111060000
..........................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................2419.0090900000000
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGA......................................................................................................................................................2219.0090411030000
.........................................................................................................................................................GGTATCCACTGTAGGCCTAT............................................................................................................................................................................................2018.0080410110001
.............................................................................................................................................................................................AGGCACGCGGTGAATGCC..........................................................................................................................................................1817.0070303010000
........................................................................................................................................................TGGTATCCACTGTAGGCCTT.............................................................................................................................................................................................2017.0070400030000
droPer2
GCC---T---------------T------------GT------A-----------------------------------------------------TGG-GGG--A-TCCATTTTTCTCAGTGC---TCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTAT---CAAAAAC----AGCAAACGAC-----------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.........................................................................................................................................................21162853.006285384984992971831672458
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCC..........................................................................................................................................................20114609.00146091535852449033220
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................23110994.00109942534750945675365181
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA........................................................................................................................................................2214506.00450615582592796134038
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT......................................................................................................................................................241955.009550171233057521
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGC...........................................................................................................................................................191889.00889022121259955
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.........................................................................................................................................................211685.006850901605115
........................................................................................................................................................TGGTATCCACTGTAGGCCTATATG.........................................................................................................................................................................................241482.004822514621522272
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.........................................................................................................................................................211473.004730021932780
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA......................................................................................................................................................241389.00389011413922312
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.........................................................................................................................................................211251.00251011611880
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.........................................................................................................................................................201247.002470412831210
.........................................................................................................................................................GGTATCCACTGTAGGCCTATATG.........................................................................................................................................................................................231192.001921353331191
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................221116.00116035233460
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.......................................................................................................................................................231114.0011401355532
...........................................................................................................................................................................................TAAGGCACGCGGTGAATG............................................................................................................................................................181103.0010303219790
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT........................................................................................................................................................22197.009702141530
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC........................................................................................................................................................22185.008500143410
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.......................................................................................................................................................23167.006701023430
........................................................................................................................................................TGGTATCCACTGTAGGCCTA.............................................................................................................................................................................................20153.005302021300
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.......................................................................................................................................................23146.004600116290
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCA..........................................................................................................................................................20144.004400022220
............................................................................................................................................................................................AAGGCACGCGGTGAATGCC..........................................................................................................................................................19138.003804011230
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCT..........................................................................................................................................................20131.00310009220
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCACT.......................................................................................................................................................23131.00310006250
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC......................................................................................................................................................24128.002801010170
........................................................................................................................................................TGGTATCCACTGTAGGCCTATA...........................................................................................................................................................................................22126.0026308960
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA........................................................................................................................................................21126.00260401570
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCA.........................................................................................................................................................19125.00250209140
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGT......................................................................................................................................................22122.002200010120
........................................................................................................................................................TGGTATCCACTGTAGGCCT..............................................................................................................................................................................................19118.00180102150
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGTT.....................................................................................................................................................25116.0016000790
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT.......................................................................................................................................................23116.00160005110
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCAC.........................................................................................................................................................21116.0016000790
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG.......................................................................................................................................................21115.0015021660
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGT...........................................................................................................................................................19114.00140002120
........................................................................................................................................................TGGTATCCACTGTAGGCCTATAT..........................................................................................................................................................................................23114.00140011030
........................................................................................................................................................TGGTATCCACTGTAGGCCTAT............................................................................................................................................................................................21113.0013000760
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCTG.........................................................................................................................................................21113.00130001120
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGG......................................................................................................................................................2419.009000180
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG........................................................................................................................................................2219.009000180
.........................................................................................................................................................GGTATCCACTGTAGGCCTATA...........................................................................................................................................................................................2118.008201140
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT......................................................................................................................................................2418.008000521
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGT......................................................................................................................................................2318.008020150
........................................................................................................................................................TGGTATCCACTGTAGGCC...............................................................................................................................................................................................1818.008000170
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGA......................................................................................................................................................2217.007000250
droWil2
TATG----------A-----ATT------------GACATACAT-----------------------------------------------------TTT-GGAG---TGCTTTATTCTC-------AGAGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGCAGGCCTATATGTTATTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAATTCTACAAAAACC-AA---AACG-----------CAAAAATATAAAAATAAAG----------------------------------------------AAAACGGACAAAAAAGAAAATTAAATGT-------T-AACASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.........................................................................................................................................................21176943.007694349918907293438639439
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA........................................................................................................................................................22124092.00240928728063218781784
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGC...........................................................................................................................................................19123262.002326229668534722735
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCC..........................................................................................................................................................20120630.0020630549245360221717259
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................2315236.005236651423334711525
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.......................................................................................................................................................231491.00491341377106
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.........................................................................................................................................................201309.00309117414786
...........................................................................................................................................................................................TAAGGCACGCGGTGAATG............................................................................................................................................................181291.0029146413264
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCA..........................................................................................................................................................201263.002630016256
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.........................................................................................................................................................211244.00244254712196
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.......................................................................................................................................................231193.0019312113950
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.........................................................................................................................................................211158.00158132126116
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT......................................................................................................................................................241123.001234503579
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGA...........................................................................................................................................................191110.001100002108
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.........................................................................................................................................................21198.00983002867
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA......................................................................................................................................................24181.00811613241
.........................................................................................................................................................GGTATCCACTGCAGGCCTATATG.........................................................................................................................................................................................23176.007638120206
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA........................................................................................................................................................21156.00560200306
............................................................................................................................................................................................AAGGCACGCGGTGAATGCC..........................................................................................................................................................19152.00520210229
............................................................................................................................................................................................AAGGCACGCGGTGAATGC...........................................................................................................................................................18147.0047050339
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................22142.004211301711
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGT...........................................................................................................................................................19137.0037011035
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC........................................................................................................................................................22136.00360102411
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT........................................................................................................................................................22136.0036410823
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCA.........................................................................................................................................................19136.00360911511
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCT..........................................................................................................................................................20125.0025003517
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.......................................................................................................................................................23121.0021000138
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG........................................................................................................................................................22119.0019210115
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCG..........................................................................................................................................................20113.0013000013
...........................................................................................................................................................................................TAAGGCACGCGGTGAATCA...........................................................................................................................................................1927.5015000114
........................................................................................................................................................TGGTATCCACTGCAGGCCTATATG.........................................................................................................................................................................................2417.00711050
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGG...........................................................................................................................................................1916.00610005
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG.......................................................................................................................................................2115.00500050
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT......................................................................................................................................................2415.00500041
droVir3
TGCGTG---CGATC-ATCAGCTGTTTTTGCATCTCATTACGCAAGTTCCGGTTTGGTGTTTTTGATGTCCTGC---CAACATTCAGGACAACATTCGTGA----GT-----------------G----CCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAATTAACAAAAAT----AACAAACGACC---TGAC----AA------------------------------------------------------------------------------------------AAASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.........................................................................................................................................................211126422.001264229813934141511807030000172509625480897771020349926159781836411022191561105022811501000010111743512111108028224428012111016000020012
.........................................................................................................................................................GGTATCCACTGTAGGCCTCTATG.........................................................................................................................................................................................23160381.0060381156123753020000000000104451100700000000000020000273641746228942483321761433960744958023827523243342852211401135615434000131331263511000701982106785
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCC..........................................................................................................................................................20119738.00197385102620533000401100012199154539751341657119511694000000200000002000000000000000110291298886524600001109005000165
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA........................................................................................................................................................2219515.009515174155521200000000121293038569848938518211133000013203106262313000100030025125710110122135419313500100001000020001
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.........................................................................................................................................................2113666.003666071400000000003832421252644132860148811900000000000000000000000000000000000114319000000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGC...........................................................................................................................................................1912407.002407081122800010000008579426997390103117000000000000000000000000000000000011315654500000000002001405
........................................................................................................................................................TGGTATCCACTGTAGGCCTCTATG.........................................................................................................................................................................................2412306.0023060100190000000000100100012000000000000000001244310382119244182264218154213138171311450911000028000000210674
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................2311958.00195855106151000000000022513177166938401852760000000000000110000000100331412612710121832751000000100000000002
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.........................................................................................................................................................211977.009770152770001000000397231425215098800000000000000000000000000000000000010491600000000000000000
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.........................................................................................................................................................201544.005440036780000000000201341413403030000000000000000000000000000000000000041000000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.......................................................................................................................................................231531.005310014290000000000675030662535048770010001000001110000000000000201300031362100000000000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTCTA...........................................................................................................................................................................................211260.00260214114000000000000011000000000000000000100000001779341137191219130103810000001400000011100
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.........................................................................................................................................................211211.00211067200000000009251443015200000000000000000000000000000000000003112000000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.......................................................................................................................................................231206.00206006250000000000411732210502327000000000000000000000000000001000000518200000000010000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT........................................................................................................................................................221198.00198001620000000000281471217902931000000000000000000000000000000000000032100000000000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTCTAT..........................................................................................................................................................................................221168.001681102400000000000101000020000000001001000000010931196201984100003142100010001000001121
...........................................................................................................................................................................................TAAGGCACGCGGTGAATG............................................................................................................................................................181144.001440011100000000008109117701212000000000000000000000000000000000001152000000000000001100
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC........................................................................................................................................................221126.00126003130000000000196311990166000000000000000000000000000000000000525100000000000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTCTATA.........................................................................................................................................................................................231111.0011100010000000000000000000000000000000000000000110691671569570001710000000100000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA......................................................................................................................................................24184.00840054000000000098293100416000000000000000000000000000010000000013000000000000000000
............................................................................................................................................................................................AAGGCACGCGGTGAATGCC..........................................................................................................................................................19183.0083015210000000000021241042000000000000000000000000000000000000112000000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT......................................................................................................................................................24173.00730041200000000001051714038000000000000001000000000000000000000116000000000000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTCT............................................................................................................................................................................................20164.006401406000000000000011000100000000000000000001000013025324000522000003201000013001
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA........................................................................................................................................................21162.006200406000000000040001303100000000000000000000000000000000000013000000000000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTCTATT.........................................................................................................................................................................................23160.006009000000000000000010000000000000000000000000001041403440009190000000100000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTCTATGA........................................................................................................................................................................................24155.005500020000000000000000000000000000000000000000024094108522100500000000000000000100
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT.......................................................................................................................................................23150.005000300000000000850542011700000000000000000000000000000000000004100000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCA..........................................................................................................................................................20149.004900000000000000520300023000000000000000000000000000000000000033000000000000000001
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCA.........................................................................................................................................................19145.0045002100000000000400111033000000000000000000000000000000000000011000000000000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCT..............................................................................................................................................................................................18138.003801900000000000000000000000000000000000000000000023305120000300000000000000000000
.................................................................................................................................................................CTGTAGGCCTCTATG.........................................................................................................................................................................................15136.00360000000000000000000000000000000000000000000002123253044010900000000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG........................................................................................................................................................22136.00360083000000000012121203600000000000000000000000000000001000015000000000000000000
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................22136.003600108000000000033021003300000000000000000000000000000010000110000000000000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTCTATGT........................................................................................................................................................................................24134.00340301000000000000000000000000000000000000000002103226022000900000000000000000100
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.......................................................................................................................................................23131.00310019000000000030032201200000000000010000000000000000000000114000000100000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTCTATC.........................................................................................................................................................................................23129.00290101000000000000000000000000000000000000000000052282221000300000000000000000000
.........................................................................................................................................................GGTATCCACTGTAGGCCTCTATAT........................................................................................................................................................................................24122.00220000000000000000000000000000000000000000000002030432103000400000000000000000000
..........................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCA.........................................................................................................................................................22121.002100180000000000000010100100000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................TCCACTGTAGGCCTCTATG.........................................................................................................................................................................................19120.002001700000000000000000000000000000000000000000000000001010000100000000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT......................................................................................................................................................24118.00180002000000000051013002200000000000000000000000000000000000101000000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCT..........................................................................................................................................................20117.001700010000000000100010011000000000000000000000000000000000000012000000000000000000
............................................................................................................................................................................................AAGGCACGCGGTGAATGC...........................................................................................................................................................18114.00140080000000000002000000000000000000000000000000000000000000004000000000000000000
..............................................................................................................................................................CCACTGTAGGCCTCTATG.........................................................................................................................................................................................18113.001301000000000000000000000000000000000000000000000100010000000100000000000000000000
........................................................................................................................................................TGGTATCCACTGTAGGCCTCTA...........................................................................................................................................................................................22112.00120000000000000000000000000000000000000000000000112021030000100000000100000000000
...........................................................................................................................................................TATCCACTGTAGGCCTCTATG.........................................................................................................................................................................................21111.00110400000000000000000000000000000000000000000000000110000201200000000000000000000
........................................................................................................................................................TGGTATCCACTGTAGGCCTCTAT..........................................................................................................................................................................................23111.00110000000000000000100100100000000000010000000001100101001000110000000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGT...........................................................................................................................................................19111.00110010000000000000000000000000000000000000000000000000000000019000000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCAC.........................................................................................................................................................21110.00100000000000000010000001000000000000000000000000000000000000017000000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAAT.............................................................................................................................................................1719.0090000000000000000000000000000000000000000000000000000000000104000000100000010020
........................................................................................................................................................TGGTATCCACTGTAGGCCTCT............................................................................................................................................................................................2119.0090200000000000000102000100000000000100000000000000001000000001000000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATTT......................................................................................................................................................2419.0090000000000000001220001200000000000000000000000000000000000001000000000000000000
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGA...........................................................................................................................................................1919.0090010000000000001000000100000000000000000000000000000000000006000000000000000000
droMoj3
GTT---TGTGCGTC-A--A------------------TCGACAA--------------------TTGCCCTGCGCTCAGCGTGCGGGACT-CG-CCGTGA----GTGA---------------------CGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAAATCC----------AACAAGCGACC---TCTAA---AAAAAGTG---------------------------------------AAATAATTCCT---ATG--G-G---T-------AT-------T-GCGTSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.........................................................................................................................................................211148445.0014844556403768316744978456696883
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA........................................................................................................................................................22149537.00495376843483181329034057975
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCC..........................................................................................................................................................20133691.003369164426210559150926791343
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................2319441.009441309488600926708830
.........................................................................................................................................................GGTATCCACTGTAGGCCTCTATG.........................................................................................................................................................................................2315658.0056589704232748878
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGC...........................................................................................................................................................1914792.004792128916912282549133
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.........................................................................................................................................................2112286.00228654684713284011
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.......................................................................................................................................................2311720.0017201480508714872
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.......................................................................................................................................................2311224.0012241614396610890
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC.........................................................................................................................................................211996.00996045663270180
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC........................................................................................................................................................221977.0097731633259000
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.........................................................................................................................................................201961.00961518537703292
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.......................................................................................................................................................231402.0040219163850
........................................................................................................................................................TGGTATCCACTGTAGGCCTCTATG.........................................................................................................................................................................................241367.00367261652921
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT......................................................................................................................................................241362.003627730612534
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA........................................................................................................................................................211355.00355685362730
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG.........................................................................................................................................................211347.0034721194165741
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT........................................................................................................................................................221289.0028940445901091
...........................................................................................................................................................................................TAAGGCACGCGGTGAATG............................................................................................................................................................181238.0023810683125113
.........................................................................................................................................................GGTATCCACTGTAGGCCTCTAT..........................................................................................................................................................................................221188.00188019011680
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA......................................................................................................................................................241147.001471341448671
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................221128.0012832444840
............................................................................................................................................................................................AAGGCACGCGGTGAATGCC..........................................................................................................................................................191109.00109550219330
.........................................................................................................................................................GGTATCCACTGTAGGCCTCTA...........................................................................................................................................................................................211108.0010803001050
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCT..........................................................................................................................................................20196.0096003643170
.........................................................................................................................................................GGTATCCACTGTAGGCCTCT............................................................................................................................................................................................20194.00940500890
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCA..........................................................................................................................................................20170.007012204223
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT.......................................................................................................................................................23164.006470113790
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCA.........................................................................................................................................................19163.00631901117151
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT......................................................................................................................................................24161.00611047490
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG........................................................................................................................................................22151.005186611200
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC......................................................................................................................................................24142.00420111390
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGT...........................................................................................................................................................19141.004100112703
.........................................................................................................................................................GGTATCCACTGTAGGCCTCTATGA........................................................................................................................................................................................24137.00370000370
.........................................................................................................................................................GGTATCCACTGTAGGCCTCTAC..........................................................................................................................................................................................22126.00260000260
.........................................................................................................................................................GGTATCCACTGTAGGCCTCC............................................................................................................................................................................................20123.00230000230
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCAA........................................................................................................................................................20123.00232101190
........................................................................................................................................................TGGTATCCACTGTAGGCCTCTAT..........................................................................................................................................................................................23122.002201001110
............................................................................................................................................................................................AAGGCACGCGGTGAATGC...........................................................................................................................................................18121.00211501230
.........................................................................................................................................................GGTATCCACTGTAGGCCTCTATT.........................................................................................................................................................................................23121.00210611130
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAAT......................................................................................................................................................24120.00200000200
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCACT.......................................................................................................................................................23119.00190041140
..........................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCA.........................................................................................................................................................22118.00181201320
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCTT.........................................................................................................................................................21117.00170071000
.........................................................................................................................................................GGTATCCACTGTAGGCCTCTATGT........................................................................................................................................................................................24117.00170300131
droGri2
----------------------------------------------------------------------------------------------------------------------------------GTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGTTTTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACA-------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA.........................................................................................................................................................211652.0065258765
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................231164.0016415014
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA........................................................................................................................................................22189.0089809
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCA.........................................................................................................................................................20167.0067670
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCC..........................................................................................................................................................20149.0049454
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA......................................................................................................................................................24110.001082
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................2218.00880
.............................................................................................................................................................................................AGGCACGCGGTGAATGCCA.........................................................................................................................................................1916.00660
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA........................................................................................................................................................2115.00550
..........................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCA.........................................................................................................................................................2215.00550
........................................................................................................................................................TGGTATCCACTGTAGGCCTCTATG.........................................................................................................................................................................................2415.00523
............................................................................................................................................................................................AAGGCACGCGGTGAATGCC..........................................................................................................................................................1915.00550
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGC...........................................................................................................................................................1913.00321
.........................................................................................................................................................GGTATCCACTGTAGGCCTCTATG.........................................................................................................................................................................................2313.00321
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT.......................................................................................................................................................2313.00330
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT......................................................................................................................................................2413.00330
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA.......................................................................................................................................................2312.00220
........................................................................................................................................................TGGTATCCACTGTAGGCCTCTAT..........................................................................................................................................................................................2312.00211
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGA......................................................................................................................................................2312.00220
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC........................................................................................................................................................2212.00220
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAAT......................................................................................................................................................2411.00110
..........................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCAAT.......................................................................................................................................................2411.00110
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC.......................................................................................................................................................2311.00101
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG........................................................................................................................................................2211.00110
..........................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCAAG.......................................................................................................................................................2411.00110
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT.........................................................................................................................................................2111.00110
............................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGCT.....................................................................................................................................................2411.00110
............................................................................................................................................................................................AAGGCACGCGGTGAATGC...........................................................................................................................................................1811.00110
.......................................................................................................................................................CTGGTATCCACTGTAGGCCTCT............................................................................................................................................................................................2211.00110
...........................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGG......................................................................................................................................................2411.00110

Generated: 10/20/2015 at 07:29 PM