ID:

dan-mir-100

 Coordinate:

scaffold_12916:2378771-2378852 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.6 -26.3 -26.2

Flybase annnotation

pre_miRNA [Dana\mir-100-RM]; miRNA [Dana\miR-100-RA]

No Repeatable elements found

Sense Strand Reads

GATGTTAAGGATTTGTAATCCAACTCAAATGGTGCATACTCACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTTTATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTGGTTTTTGGCAACAAAATCAATCGAATGTGTCACAATGAGAGA

**********************************************.....((((.(((((..(((((((..(((..(((((((............)).)))))..)))..)))))))..))))).)))).......********************************************* 		Read size # Mismatch Hit Count Total Norm Total M044

female body

 V106

head

 V055

head

 V105

male body		 M058

embryo

 V039

embryo
.............................................................AACCCGTAAATCCGAACTTGTG................................................................................................... 22 0 1 2333.00 2333 1697 478 106 39 11 2
.............................................................AACCCGTAAATCCGAACTTGT.................................................................................................... 21 0 1 1412.00 1412 208 327 664 210 3 0
.............................................................AACCCGTAAATCCGAACTTGTGT.................................................................................................. 23 1 1 654.00 654 28 153 139 333 1 0
....................................................................................................CAAGACCGGCATTATGGGAGTC............................................................ 22 0 1 455.00 455 203 75 44 132 1 0
....................................................................................................CAAGACCGGCATTATGGGAGT............................................................. 21 0 1 409.00 409 130 87 24 168 0 0
..............................................................ACCCGTAAATCCGAACTTGTG................................................................................................... 21 0 1 257.00 257 179 67 10 1 0 0
.............................................................AACCCGTAAATCCGAACTTGTGA.................................................................................................. 23 1 1 107.00 107 36 44 25 2 0 0
....................................................................................................CAAGACCGGCATTATGGGAG.............................................................. 20 0 1 92.00 92 53 10 5 24 0 0
.............................................................AACCCGTAAATCCGAACTTG..................................................................................................... 20 0 1 82.00 82 62 9 8 3 0 0
....................................................................................................CAAGACCGGCATTATGGGA............................................................... 19 0 1 62.00 62 11 19 1 31 0 0
.............................................................AACCCGTAGATCCGAACTTGTG................................................................................................... 22 1 1 60.00 60 59 1 0 0 0 0
....................................................................................................CAAGACCGGCATTATGGG................................................................ 18 0 1 54.00 54 14 28 9 3 0 0
..............................................................ACCCGTAAATCCGAACTTGT.................................................................................................... 20 0 1 51.00 51 17 15 14 5 0 0
....................................................................................................CAAGACCGGCATTATGGGT............................................................... 19 1 1 44.00 44 3 31 1 9 0 0
..............................................................ACCCGTAAATCCGAACTTGTGC.................................................................................................. 22 0 1 36.00 36 12 24 0 0 0 0
...................................................................................................ACAAGACCGGCATTATGGGAGT............................................................. 22 0 1 34.00 34 8 15 0 11 0 0
..............................................................ACCCGTAAATCCGAACTTGTGT.................................................................................................. 22 1 1 24.00 24 7 7 6 4 0 0
.....................................................................................................AAGACCGGCATTATGGGAGTC............................................................ 21 0 1 15.00 15 14 0 0 1 0 0
...............................................................CCCGTAAATCCGAACTTGTG................................................................................................... 20 0 1 15.00 15 15 0 0 0 0 0
....................................................................................................CAAGACCGGCATTATGGGAGTT............................................................ 22 1 1 15.00 15 9 3 0 3 0 0
.............................................................AACCCGTATATCCGAACTTGTG................................................................................................... 22 1 1 15.00 15 15 0 0 0 0 0
.............................................................AACCCGTAAATCCGAACTTGTT................................................................................................... 22 1 1 14.00 14 2 9 3 0 0 0
...................................................................................................ACAAGACCGGCATTATGGGAG.............................................................. 21 0 1 14.00 14 5 2 2 5 0 0
.....................................................................................................AAGACCGGCATTATGGGAGT............................................................. 20 0 1 11.00 11 9 0 1 1 0 0
.............................................................AACCCGTAAATCCGAACTTGC.................................................................................................... 21 1 1 11.00 11 0 2 6 3 0 0
.............................................................GACCCGTAAATCCGAACTTGTG................................................................................................... 22 1 1 11.00 11 8 2 1 0 0 0
....................................................................................................CAAGACCGGCATTATGGGAGTCT........................................................... 23 0 1 10.00 10 2 4 2 2 0 0
.............................................................AACCCGTAAATCCGAACTTGTGTT................................................................................................. 24 1 1 10.00 10 1 2 2 5 0 0
.............................................................AACCCGTAAATCCGACCTTGT.................................................................................................... 21 1 1 10.00 10 0 0 9 1 0 0
..............................................................ACCCGTAAGTCCGAACTTGTG................................................................................................... 21 1 1 10.00 10 10 0 0 0 0 0
.............................................................AACCCGTAGATCCGAACTTGT.................................................................................................... 21 1 1 10.00 10 8 1 1 0 0 0
....................................................................................................CAGGACCGGCATTATGGGAGTC............................................................ 22 1 1 9.00 9 0 8 1 0 0 0
............................................................AAACCCGTAAATCCGAACTTGT.................................................................................................... 22 0 1 9.00 9 1 3 4 1 0 0
.............................................................AACCCGGAAATCCGAACTTGT.................................................................................................... 21 1 1 9.00 9 0 0 9 0 0 0
.............................................................AACCCGTAAATCCGAACTTGA.................................................................................................... 21 1 1 8.00 8 0 3 2 3 0 0
..............................................................ACCCGTAAATCCGAACTTG..................................................................................................... 19 0 1 8.00 8 8 0 0 0 0 0
.............................................................AACCCGTAAATCAGAACTTGT.................................................................................................... 21 1 1 6.00 6 0 1 5 0 0 0
..............................................................ACCCGTAAATCCGAACTTGTGA.................................................................................................. 22 1 1 6.00 6 5 1 0 0 0 0
................................................................CCGTAAATCCGAACTTGTG................................................................................................... 19 0 1 6.00 6 6 0 0 0 0 0
.............................................................AACCCGTAAATCCGAACTTGGG................................................................................................... 22 1 1 6.00 6 3 2 1 0 0 0
.............................................................AACCCGTACATCCGAACTTGTG................................................................................................... 22 1 1 6.00 6 5 1 0 0 0 0
.............................................................AACCCGTAAATCCGAACTTCT.................................................................................................... 21 1 1 6.00 6 0 0 6 0 0 0
.............................................................AACCAGTAAATCCGAACTTGT.................................................................................................... 21 1 1 6.00 6 0 0 4 2 0 0
.............................................................AACCCGCAAATCCGAACTTGT.................................................................................................... 21 1 1 6.00 6 0 0 6 0 0 0
...................................................................................................ACAAGACCGGCATTATGGGA............................................................... 20 0 1 6.00 6 0 1 3 2 0 0
.............................................................AACCCGTAGATCCGAACTTGTT................................................................................................... 22 2 1 6.00 6 6 0 0 0 0 0
............................................................AAACCCGTAAATCCGAACTTGTG................................................................................................... 23 0 1 5.00 5 4 1 0 0 0 0
.............................................................AACACGTAAATCCGAACTTGT.................................................................................................... 21 1 1 5.00 5 0 2 2 1 0 0
.....................................................................................................AAGACCGGCATTATGGGAG.............................................................. 19 0 1 5.00 5 4 0 0 1 0 0
.............................................................AAACCGTAAATCCGAACTTGT.................................................................................................... 21 1 1 5.00 5 0 0 5 0 0 0
.............................................................AACCCGTAAATCCGAACTTGTA................................................................................................... 22 1 1 5.00 5 3 1 1 0 0 0
.................................................................CGTAAATCCGAACTTGTG................................................................................................... 18 0 1 5.00 5 4 1 0 0 0 0
.............................................................AACCCGTAAATCCGAACTTGTC................................................................................................... 22 1 1 4.00 4 2 2 0 0 0 0
.............................................................AACCCGTAAATACGAACTTGT.................................................................................................... 21 1 1 4.00 4 0 4 0 0 0 0
.............................................................AACCCGTAGATCCGAACTTG..................................................................................................... 20 1 1 4.00 4 4 0 0 0 0 0
.............................................................AACCCGTAAATCCGAACTTGG.................................................................................................... 21 1 1 4.00 4 0 0 4 0 0 0
.............................................................AACCCGTAAAGCCGAACTTGT.................................................................................................... 21 1 1 4.00 4 0 0 4 0 0 0
..............................................................ACCCGTAATTCCGAACTTGTG................................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0
.............................................................AACCCGTACATCCGAACTTGT.................................................................................................... 21 1 1 4.00 4 1 1 2 0 0 0
.............................................................AACCAGTAAATCCGAACTTGTG................................................................................................... 22 1 1 4.00 4 0 4 0 0 0 0
.............................................................AACCCGTAAATACGAACTTGTG................................................................................................... 22 1 1 4.00 4 0 3 0 1 0 0
.............................................................AACCCGTAAATCCGAACTTGCGT.................................................................................................. 23 2 1 4.00 4 0 1 1 2 0 0
.............................................................AACCCGTAAATCCGAACTTGAGT.................................................................................................. 23 2 1 4.00 4 0 1 0 3 0 0
....................................................................................................CAAGACCGGCATTATGGGAGAC............................................................ 22 1 1 4.00 4 0 0 1 3 0 0
.............................................................AACCCGTAAATCCGAACTT...................................................................................................... 19 0 1 4.00 4 1 1 2 0 0 0
.............................................................AACCCCTAAATCCGAACTTGTG................................................................................................... 22 1 1 3.00 3 1 1 1 0 0 0
............................................................CAACCCGTAAATCCGAACTTGT.................................................................................................... 22 1 1 3.00 3 0 0 3 0 0 0
.............................................................AACCTGTAAATCCGAACTTGT.................................................................................................... 21 1 1 3.00 3 0 0 3 0 0 0
.............................................................AACCCGTAAATCCGCACTTGT.................................................................................................... 21 1 1 3.00 3 0 0 3 0 0 0
............................................................CAACCCGTAAATCCGAACTTGTG................................................................................................... 23 1 1 3.00 3 2 1 0 0 0 0
.............................................................AACCCGTAAATCCTAACTTGTGT.................................................................................................. 23 2 1 3.00 3 0 2 1 0 0 0
....................................................................................................CAAGACCGTCATTATGGGAGT............................................................. 21 1 1 3.00 3 2 0 0 1 0 0
....................................................................................................CAAGACCGACATTATGGGAGTC............................................................ 22 1 1 3.00 3 3 0 0 0 0 0
.............................................................AACCCGTAAATGCGAACTTGTGT.................................................................................................. 23 2 1 3.00 3 0 0 1 2 0 0
.............................................................AACCCGTAAATCCGAACTTTTG................................................................................................... 22 1 1 3.00 3 0 2 1 0 0 0
.............................................................AACCCGTAAATCCGAACTTGTGC.................................................................................................. 23 0 1 3.00 3 0 3 0 0 0 0
................................................................CCGTAAATCCGAACTTGT.................................................................................................... 18 0 1 3.00 3 3 0 0 0 0 0
.............................................................AACCCGTAAATCTGAACTTGTG................................................................................................... 22 1 1 3.00 3 1 0 2 0 0 0
....................................................................................................CAAGACCGGCATTATGGGAGA............................................................. 21 1 1 3.00 3 1 1 0 1 0 0
.............................................................AACCCGTAAATCAGAACTTGTG................................................................................................... 22 1 1 3.00 3 0 1 1 1 0 0
...................................................................................................ACAAGACCGGCATTATGGG................................................................ 19 0 1 3.00 3 1 1 0 1 0 0
.............................................................AACCCTTAAATCCGAACTTGTG................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0
....................................................................................................CAAGACCGACATTATGGGAGT............................................................. 21 1 1 3.00 3 3 0 0 0 0 0
.............................................................AACCCGTAAATACGAACTTGTGT.................................................................................................. 23 2 1 3.00 3 0 1 0 2 0 0
.............................................................AACTCGTAAATCCGAACTTGTG................................................................................................... 22 1 1 3.00 3 0 0 0 0 3 0
...................................................................................................CCAAGACCGGCATTATGGGAGTC............................................................ 23 1 1 3.00 3 3 0 0 0 0 0
.............................................................AACCCGTAAATCTGAACTTGTGT.................................................................................................. 23 2 1 3.00 3 0 1 0 2 0 0
.............................................................AACCCGGAAATCCGAACTTGTG................................................................................................... 22 1 1 3.00 3 0 0 3 0 0 0
.............................................................AAGCCGTAAATCCGAACTTGTG................................................................................................... 22 1 1 3.00 3 0 3 0 0 0 0
.............................................................AACCCGTAAATCCGAGCTTGT.................................................................................................... 21 1 1 3.00 3 0 1 1 1 0 0
.............................................................AACCCGGAAATCCGAACTTGTGT.................................................................................................. 23 2 1 3.00 3 0 0 2 1 0 0
.............................................................AACCCGTAAGTCCGAACTTGTG................................................................................................... 22 1 1 3.00 3 0 2 1 0 0 0
.............................................................AACCCGTAAATCCTAACTTGT.................................................................................................... 21 1 1 3.00 3 0 3 0 0 0 0
.............................................................AACCCGTAGATCCGAACTTGTC................................................................................................... 22 2 1 3.00 3 3 0 0 0 0 0
.............................................................AACCCGTAAATCCAAACTTGT.................................................................................................... 21 1 1 3.00 3 0 1 2 0 0 0
.............................................................AACCCGCAAATCCGAACTTGTGT.................................................................................................. 23 2 1 3.00 3 0 0 0 3 0 0
.............................................................AACCCGTAAAACCGAACTTGTGT.................................................................................................. 23 2 1 2.00 2 0 0 0 2 0 0
.............................................................AACCCTTAAATCCGAACTTGTGT.................................................................................................. 23 2 1 2.00 2 0 0 0 2 0 0
.............................................................AACCCTTAAATCCGAACTTGT.................................................................................................... 21 1 1 2.00 2 0 0 2 0 0 0
.............................................................AACCCGTAAATCCGAATTTGT.................................................................................................... 21 1 1 2.00 2 0 0 2 0 0 0
.............................................................AACCCGTAAATCCGTACTTGT.................................................................................................... 21 1 1 2.00 2 0 0 1 1 0 0
.............................................................AACCCGTAAATCCGAAATTGT.................................................................................................... 21 1 1 2.00 2 0 1 1 0 0 0
....................................................................................................CAAGACCGGCATTATGGGGGTC............................................................ 22 1 1 2.00 2 1 0 1 0 0 0
....................................................................................................CAAGACCGGCATTATGGGAGTA............................................................ 22 1 1 2.00 2 2 0 0 0 0 0
.............................................................AACCCGTAAATCCGAACTTGTCT.................................................................................................. 23 2 1 2.00 2 0 0 2 0 0 0
.............................................................GACCCGTAAATCCGAACTTGT.................................................................................................... 21 1 1 2.00 2 0 1 1 0 0 0
.............................................................AACCCGTAAATCCGAACTTGTGTTT................................................................................................ 25 2 1 2.00 2 1 0 0 1 0 0
............................................................GAACCCGTAAATCCGAACTTGTG................................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
.............................................................AAGCCGTAAATCCGAACTTGT.................................................................................................... 21 1 1 2.00 2 0 2 0 0 0 0
....................................................................................................CAAGACCGGCATTATGGGAGGC............................................................ 22 1 1 2.00 2 0 0 1 1 0 0
.............................................................AACCCGTAAATCCGAACT....................................................................................................... 18 0 1 2.00 2 2 0 0 0 0 0
.............................................................AACCCGTAAATCCGAGCTTGTG................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
.............................................................AATCCGTAAATCCGAACTTGT.................................................................................................... 21 1 1 2.00 2 0 0 2 0 0 0
....................................................................................................CAAGACCGCCATTATGGGAGT............................................................. 21 1 1 2.00 2 1 0 1 0 0 0
.............................................................AACCCGTAAATCCGAATTTGTG................................................................................................... 22 1 1 2.00 2 0 1 1 0 0 0
.............................................................AACCCGGAAATCCGATCTTGT.................................................................................................... 21 2 1 2.00 2 0 0 2 0 0 0
.............................................................AACCCGTAAACCCGAACTTGTGT.................................................................................................. 23 2 1 2.00 2 0 0 0 2 0 0
..............................................................GCCCGTAAATCCGAACTTGTG................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.............................................................AACCTGTAAATCCGAACTTGTGT.................................................................................................. 23 2 1 2.00 2 0 0 2 0 0 0
.............................................................AACCCGTAAATCCGAACTTT..................................................................................................... 20 1 1 2.00 2 1 1 0 0 0 0
.............................................................AACCCGTAAATCCGAACTTGCG................................................................................................... 22 1 1 2.00 2 0 1 1 0 0 0
.............................................................AACCCGTAAATCCGAACTCGT.................................................................................................... 21 1 1 2.00 2 0 0 2 0 0 0
....................................................................................................CAAGACCGGCATTATCGGAGT............................................................. 21 1 1 2.00 2 0 0 1 1 0 0
............................................................GAACCCGTGAATCCGAACTTGTG................................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0
.............................................................AACCCGTAGATCCGAACTTGTGT.................................................................................................. 23 2 1 2.00 2 2 0 0 0 0 0
.............................................................AACCCGTAAATCAGAACTTGTGT.................................................................................................. 23 2 1 2.00 2 0 0 0 2 0 0
.............................................................AACCCCTAAATCCGAACTTGT.................................................................................................... 21 1 1 2.00 2 0 0 1 1 0 0
.............................................................AACCCGTAAATCCGAACTCGC.................................................................................................... 21 2 1 2.00 2 0 0 2 0 0 0
....................................................................................................CAAGACCGGCATTATAGGAGTC............................................................ 22 1 1 2.00 2 0 0 0 2 0 0
.............................................................AACCCGTACATCCGCACTTGT.................................................................................................... 21 2 1 2.00 2 0 0 2 0 0 0
.............................................................AGCCCGTAAATCCGAACTTGTG................................................................................................... 22 1 1 2.00 2 1 0 0 0 1 0
.............................................................AAAACGTAAATCCGAACTTGT.................................................................................................... 21 2 1 2.00 2 0 0 2 0 0 0
.............................................................AACCCGTATATCCGAACTTGT.................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.......................................................................................................GACCGGCATTATGGGAGTCTGT......................................................... 22 0 1 2.00 2 1 0 0 1 0 0
.............................................................AACCCGTAAATCCGATCTTGTG................................................................................................... 22 1 1 2.00 2 0 0 1 1 0 0
..............................................................ACCCGTAAATCCGAACTTGTA................................................................................................... 21 1 1 2.00 2 0 2 0 0 0 0
....................................................................................................CAAGACCGCCATTATGGGAGTC............................................................ 22 1 1 2.00 2 1 0 0 1 0 0
.............................................................AACCCGGAAGTCCGAACTTGT.................................................................................................... 21 2 1 2.00 2 0 0 2 0 0 0
...........................................................ATAACCCGTAAATCCGAACTTGTG................................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
.............................................................AACCCGTAAATCTGAACTTGT.................................................................................................... 21 1 1 2.00 2 0 2 0 0 0 0
.............................................................AACCCGTAAATCCGAACTTTT.................................................................................................... 21 1 1 2.00 2 0 1 1 0 0 0
.............................................................AACCCGTAAATCCGAACTTGTGAA................................................................................................. 24 2 1 2.00 2 1 0 0 0 1 0
.............................................................AACCCGTAAATCCGAACTGGT.................................................................................................... 21 1 1 2.00 2 0 0 2 0 0 0
.............................................................AACCCGTAAATCCGATCTTGT.................................................................................................... 21 1 1 2.00 2 0 0 2 0 0 0
....................................................................................................CAAGACAGGCATTATGGGAGT............................................................. 21 1 1 2.00 2 0 0 1 1 0 0
....................................................................................................CAAGACAGGCATTATGGGAGTC............................................................ 22 1 1 2.00 2 0 0 1 1 0 0
......................................................................................................AGACCGGCATTATGGGAGTC............................................................ 20 0 1 2.00 2 1 1 0 0 0 0
.............................................................AACCCGTAAAGCCGAACTTGTG................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGGAATTCCGAGCTTGT.................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0
.............................................................TACCCGCAAATCCGAACTTGT.................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
....................................................................................................CAAGACCGGCCTTATGGGA............................................................... 19 1 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCATAAATCCGAACTTGTGA.................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0
....................................................................................................CAAGACCGGCATTATTGGT............................................................... 19 2 1 1.00 1 0 0 0 1 0 0
....................................................................................................CAGGACCGGCATTATGGGAG.............................................................. 20 1 1 1.00 1 0 1 0 0 0 0
.............................................................AACCCGTAAAGCCGACCGTGT.................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGAAAAGCCGAACTTGTGT.................................................................................................. 23 3 1 1.00 1 0 0 1 0 0 0
....................................................................................................CAAGACCGGCATTATGGGAT.............................................................. 20 1 1 1.00 1 0 1 0 0 0 0
.............................................................AACCAGTAAATCCGATCTTGTGA.................................................................................................. 23 3 1 1.00 1 0 0 1 0 0 0
....................................................................................................CAAGACCGGCGTTATGGG................................................................ 18 1 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAAATCCGAACTAGT.................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
....................................................................................................TAAGACCGGCATTATGGGAGTC............................................................ 22 1 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAAATCAGAACTTGG.................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..............................................................ACCCGTAAATCCTAACTTGTGC.................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
.............................................................AAGCCGTATATCCGAACTTGTG................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCCCAAATCCGAACTTG..................................................................................................... 20 2 1 1.00 1 0 0 1 0 0 0
....................................................................................................CAAGACCGGCATTATGGGAGTCG........................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.............................................................AACCCGTAAATCCGTACTGGT.................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
............................................................CAACCCGTAAACCCGAACTTGT.................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAAGTCCGAACTTGT.................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTCAATCCGAACTTGT.................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAAACCTGAACTTGC.................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0
.............................................................ACCCGGTACATCCGAACTTGTG................................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0
....................................................................................................CAAGACCGGCATGATGGGAGTC............................................................ 22 1 1 1.00 1 0 0 0 1 0 0
.............................................................AACCCGTAAATCCGGACATGTG................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGGAATTCCGAACTTGT.................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAAATCCGAACATGTG................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
....................................................................................................CAAGACCGGCATCATGGGAGTC............................................................ 22 1 1 1.00 1 0 0 0 1 0 0
..............................................................ACCCGAAAATCCGAACTTGT.................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0
.............................................................AACGCGGAAATCCGAACTTGC.................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0
..............................................................ACCCGTAAATCCGAACTTGTGCT................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0
............................................................TAACCCGTGAATCCGAACTTGT.................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
....................................................................................................TAAGACCGGCATGATGGGAGGC............................................................ 22 3 1 1.00 1 0 0 1 0 0 0
....................................................................................................CAAGACCGGCATTATGGTAGT............................................................. 21 1 1 1.00 1 0 1 0 0 0 0
.............................................................ACCCCGTAAATCCGAACTTGTGT.................................................................................................. 23 2 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAAATCCGAACGTGTGT.................................................................................................. 23 2 1 1.00 1 0 0 1 0 0 0
....................................................................................................CAAGACCGGCTTTATGGGAGTC............................................................ 22 1 1 1.00 1 0 0 1 0 0 0
..............................................................ACCCGTAAGTCCGAACTTGTGC.................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
.............................................................TACCCGTAAATCCGAACTTCTG................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
.....................................................................................................AAGACCGGCATTATGGGAGTT............................................................ 21 1 1 1.00 1 1 0 0 0 0 0
.............................................................AACCCCTAAATCCGCACTTGT.................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
.............................................................AACGCGGAAAGCCGAACTTGTG................................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0
.............................................................AAACCGTAAATCCGAACTTGTG................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAAATCCGAACTTCTG................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAAATCCGAGCTTGTGT.................................................................................................. 23 2 1 1.00 1 0 0 0 1 0 0
.............................................................AACCTGTAAATCCGAACTTG..................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
....................................................................................................CTAGACCGGCATTATGGGAGT............................................................. 21 1 1 1.00 1 0 0 0 1 0 0
.............................................................AGCCCGTAAATCCGAACTTGTGT.................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0
...................................................................................................ACAAGACCAGCATTATGGGAG.............................................................. 21 1 1 1.00 1 1 0 0 0 0 0
....................................................................................................CAAGACCGGCATTATGGGAGTCAAA......................................................... 25 3 1 1.00 1 0 1 0 0 0 0
.............................................................AACCAGTAAATCCGAACTTGTGA.................................................................................................. 23 2 1 1.00 1 0 0 1 0 0 0
.............................................................AAGCCGTAAATCCGAACGTG..................................................................................................... 20 2 1 1.00 1 0 0 1 0 0 0
....................................................................................................CAGGACCGGCATTATGGGAGT............................................................. 21 1 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAAATTCGAACTTGTG................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................CGAGACCGGCATTATGGGAGTC............................................................ 22 1 1 1.00 1 0 0 0 1 0 0
....................................................................................................CAAGACCGGCATTATGGGCGTC............................................................ 22 1 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAAATCCGCACTTGTT................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAAACCCGAAATTGT.................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
.............................................................AGCCCGTAAATCCGAACTTGT.................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
.............................................................AACCCGTAAATCCGAACTCG..................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAAATCCGAACTTGCGA.................................................................................................. 23 2 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAAATCCGAACCTGAG................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
....................................................................................................CAAGACCGGCATTATCGGAGTT............................................................ 22 2 1 1.00 1 0 0 0 1 0 0
....................................................................................................CAGGACCGGCATTATAGGAGTC............................................................ 22 2 1 1.00 1 0 0 0 1 0 0
....................................................................................................TAAGACCGGCATTATGGGA............................................................... 19 1 1 1.00 1 0 0 1 0 0 0
....................................................................................................CGAGACCGGCATTATGGGAGTT............................................................ 22 2 1 1.00 1 1 0 0 0 0 0
....................................................................................................CAAGACCTGCATTATGGGAG.............................................................. 20 1 1 1.00 1 0 0 0 1 0 0
...................................................................................................ACAAGACCGGCATTATGGGAGA............................................................. 22 1 1 1.00 1 0 0 0 1 0 0
.............................................................AACCCGTAAATCCGCACTTGTG................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.............................................................TACCCGTAAATCAGAACTTGT.................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
.............................................................AACACGTAACTCCGAACTTGT.................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTACATCCTAACTTTT.................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0
..............................................................ACCCGTAAATCTGAACTTGTG................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
.............................................................AACCCGTGAATCCGTACATGT.................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTATATCCGAGCTTGT.................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..............................................................ACCCGTAAATCCGAACTCGTGT.................................................................................................. 22 2 1 1.00 1 0 0 1 0 0 0
....................................................................................................CAAGACCGGCATCATGGGAGT............................................................. 21 1 1 1.00 1 0 0 0 1 0 0
.............................................................AACCCGTAAATCCGAATTGGTGT.................................................................................................. 23 3 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAACTCCGACCTTTTG................................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0
..............................................................ACCCGTAAGTCCGAACTTGT.................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..............................................................ACCCGTAAATCCGAACTTGTGG.................................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................CAAGCCCGGCATTATGGGAGTC............................................................ 22 1 1 1.00 1 0 0 1 0 0 0
....................................................................................................CAAGACCGGCATTACGGGAGTC............................................................ 22 1 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAAATCCGCACTCGT.................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
.............................................................CACCCGTAAATCCGAACTTGTGA.................................................................................................. 23 2 1 1.00 1 0 1 0 0 0 0
.............................................................AACCCGTAAATCCGGACTTGTGTTT................................................................................................ 25 3 1 1.00 1 0 0 1 0 0 0
...................................................................................................ACGAGACCGGCATTATGGGAGT............................................................. 22 1 1 1.00 1 0 0 0 1 0 0
....................................................................................................CCAGACCGGCATTATGGGAGT............................................................. 21 1 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAAATCCGACCTTGTG................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.............................................................TACCCCTAAATCCGAACTTGTG................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCTTAACTCCGAACTTGT.................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
.............................................................AAGCCGTAAATACGAACTTGT.................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAATTCCGAACTTGTGA.................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0
.............................................................AACCCGTAGATCCGAACTTGTGA.................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0
....................................................................................................CAAGACCGGCATTATGGGAGTCA........................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.............................................................AACCCGTAAATCCGAACTCGTGT.................................................................................................. 23 2 1 1.00 1 0 0 1 0 0 0
..............................................................ACCCGTAAATCCGAACTTCTG................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
.............................................................AACCCGTAAATCCGAACTTGTGG.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0
.............................................................AACCCGTAAATCCGGACTTGT.................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTACATCCGAACTTGAGT.................................................................................................. 23 3 1 1.00 1 0 0 0 1 0 0
....................................................................................................CAATACCGGCATTATGGG................................................................ 18 1 1 1.00 1 0 1 0 0 0 0
.............................................................AACCCGTGAATCTAAACTTGT.................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0
.............................................................AACTCGTAAATCCGAACTTGTGT.................................................................................................. 23 2 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAAACCCGAACTTGT.................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
....................................................................................................CAAGACCGGCATTATGCGAGTC............................................................ 22 1 1 1.00 1 0 0 0 1 0 0
.............................................................AACCCGTAAATCCGACATTGG.................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0
....................................................................................................CAAGACCGACATTATGGGAGA............................................................. 21 2 1 1.00 1 0 0 0 1 0 0
.............................................................AACCCATAAATCCGAACTTGT.................................................................................................... 21 1 1 1.00 1 0 0 0 1 0 0
.............................................................AACCCGTAAAGCCGGACTTGTG................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAAATCCGAACCCGT.................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAAATCCGAACTGGTGT.................................................................................................. 23 2 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGCAAACCCGAACTTGCG................................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0
.............................................................TACCCGTAGATCCGAACTTGG.................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0
................................................................CCGTAAATCCGAACTTGTGCTGTTTTT........................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0
.............................................................AACCCGTAAATCGGAACTTGTGT.................................................................................................. 23 2 1 1.00 1 0 0 0 1 0 0
..............................................................ACCCGTAGACCCGAACTTGTGT.................................................................................................. 22 3 1 1.00 1 0 0 1 0 0 0
...............................................................CCCGTAAAACCGAACTTGTGC.................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
.............................................................AACCCGCAAACCCCAACTTGTG................................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAAATACGAACTTGTGA.................................................................................................. 23 2 1 1.00 1 0 1 0 0 0 0
....................................................................................................TAAGACCGGCATGATGGGAGTC............................................................ 22 2 1 1.00 1 0 0 1 0 0 0
....................................................................................................CAAGACCGTCATTATGGGAGTC............................................................ 22 1 1 1.00 1 0 0 0 1 0 0
.............................................................AACCCGTAAATCCGAACTTAT.................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAAAACCGAACGTGT.................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
.............................................................AACCGGTAAATCCGAACTTGT.................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCGTAGATCGGAACTTGTG................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.............................................................CACCCGTAAATCCGAACTTGTG................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.............................................................AACACGTAAATCCGAACTTGTGT.................................................................................................. 23 2 1 1.00 1 0 0 0 1 0 0
..............................................................GCCCGTAAATCCGAACTTGT.................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0
.............................................................AACCCGGAAATCTGAACTTGT.................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
....................................................................................................AAAGACCGGCATTATGGGAGT............................................................. 21 1 1 1.00 1 0 0 0 1 0 0
....................................................................................................CAAGACCGGCATTATGGGATTC............................................................ 22 1 1 1.00 1 0 0 0 1 0 0
.............................................................AACCCGTAAATCCAAACTTGTG................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.............................................................AACTCGTAAATCCGAACTTGT.................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
.............................................................AACCCGTAAATGCGAACTTGTG................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.............................................................AAACCGTAATTCCGAACTTGTGT.................................................................................................. 23 3 1 1.00 1 0 0 1 0 0 0
.............................................................AACCTGTAAAGCCGAACTTGTGT.................................................................................................. 23 3 1 1.00 1 0 0 0 1 0 0
.............................................................AACCCGGAAATACGTACTTGT.................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0
.............................................................AGCCCGTAAATCCGAACTTG..................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
....................................................................................................CAAGACCGGCATTATTGGAGT............................................................. 21 1 1 1.00 1 1 0 0 0 0 0
....................................................................................................CAAGACCGGCATTCTGGGAGT............................................................. 21 1 1 1.00 1 0 0 1 0 0 0
................................................................................................GTTACAAGACCGGCATTATGGGAGTC............................................................ 26 0 1 1.00 1 1 0 0 0 0 0
.............................................................AATCCGTAAATCCGAACTTGAGT.................................................................................................. 23 3 1 1.00 1 0 0 0 1 0 0
.................................................................................................TTACAAGACCGGCATTATGGGA............................................................... 22 0 1 1.00 1 0 0 1 0 0 0
.............................................................AACCCCTAAATCCGAACTTGTGT.................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0
....................................................................................................CAAGACCGGCATTATGGGAGCC............................................................ 22 1 1 1.00 1 0 0 0 1 0 0
.............................................................AACCCGTAAATCCGACCTTGTGT.................................................................................................. 23 2 1 1.00 1 0 0 0 1 0 0
....................................................................................................CAAGACCGTCGTTATGGGAGTC............................................................ 22 2 1 1.00 1 0 1 0 0 0 0
.............................................................CACCCGTAAATCCGAACTTGTGC.................................................................................................. 23 1 1 1.00 1 0 1 0 0 0 0
.............................................................TACCCGTAAGGCCGAACTTGT.................................................................................................... 21 3 1 1.00 1 0 0 1 0 0 0
.............................................................AAACAGTAAATCCGAACTTGT.................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
....................................................................................................CAAGACCGACATTATGGGAG.............................................................. 20 1 1 1.00 1 0 0 0 1 0 0
.............................................................AACCCGGAAATCCGAACTTGTT................................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0

Anti-sense strand reads

CTACAATTCCTAAACATTAGGTTGAGTTTACCACGTATGAGTGTATACCTGGTAATTGTCTTTGGGCATTTAGGCTTGAACACGACAAAAAATAGACAATGTTCTGGCCGTAATACCCTCAGACAGTTACGTTTGTTGACCAAAAACCGTTGTTTTAGTTAGCTTACACAGTGTTACTCTCT

*********************************************.....((((.(((((..(((((((..(((..(((((((............)).)))))..)))..)))))))..))))).)))).......********************************************** 		Read size # Mismatch Hit Count Total Norm Total V055

head

 V105

male body		 V106

head

 M044

female body
.................................................TGGTAATTGTCATGGGGCATAT............................................................................................................... 22 3 1 1.00 1 1 0 0 0
..................................................................................................ATGTTCTGGCCGTAATACCCTC.............................................................. 22 0 1 1.00 1 0 1 0 0
................................ACGTATGGGTGTGTACCTGGT................................................................................................................................. 21 2 1 1.00 1 0 0 1 0
.......................................................................AGGCTTCAACAGGACAAA............................................................................................. 18 2 15 0.07 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_12916:2378721-2378902 + dan-mir-100 Known_mirbase ---------GATG---------------------------TTAAGGATTTGTAATCCAACTC------------AAATGGTGCATACTCACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTTTATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATC-------------------------------------AATCGA-ATG-------------TGTCACAATGAGAGA-----------------
droBip1 scf7180000396430:324424-324605 + ---------GACA---------------------------TAAAGGAGTTGTTATACAACTC------------AAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTTTATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATC-------------------------------------AAACGA-ATG-------------TGTCATAATGCGAGA-----------------
droKik1 scf7180000302401:73260-73434 - ---------AA----TGCAATT-C--GCA------------CAACGACTTCTAATCCAACACAAGAAA-----GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATC-------------------------------------AA-----------------------------------------------------
droFic1 scf7180000454059:476371-476555 - ---------AA-GAAAACAATTTCAAGCACCGAC------TAAACGATTTCTAATCCAACAC-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AGCAAAATCAA------------------------------------AT-GA-------------------------------------------------
droEle1 scf7180000491338:2438719-2438904 + ---------GACGAATTCTATTTCAAGGACCAAC------TAAACAATTTCTAATCCAACAC-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATCAA------------------------------------AT-GA-------------------------------------------------
droRho1 scf7180000780227:11821-12027 + ---------GACGAATTAAATTTCAAGTACCAAC------TAAACGATTTCAAATCCAACAC-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATCGA------------------------------------AT-GACAAATCTAA-AACA---TGT---AAT----GA-----------------
droBia1 scf7180000302422:5216157-5216338 - CTTACCA-GGCCGAATTCA---------------------------ATTTCTAATCCAACAC-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATCGA------------------------------------GT-AACATATCAA-----------------------A-----------------
droTak1 scf7180000415867:746259-746489 + ATTCCTATAGACCAATTCAATTTCAAGGACCGCC------GAAATGACTTCTAATTCGACAC-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACTAAATCTA------------------------------------AT-GACAAATGTAA-T------------AATGGCGGAGTAAGGTTTAAAAGTTA
droEug1 scf7180000409447:413905-414078 + ---------A----ATTCTATTTCAGGGACCGCC------TAAATGATTTCTAATCCAACAC-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTT-TTGGC-AACAAAAT---------------------------------------------------------------------------------------------
dm3 chr2L:18471373-18471566 + dme-mir-100 Known_mirbase ---------GA--------AGTTCACG-ACCGCC------CTAATGATTTCTTAT--AACTT-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATC-------------------------------------AAT-GACAAATCGAA-AAATCGA-----------CAAA-----------------
droSim2 2l:18032378-18032557 + dsi-mir-100 Known_mirbase ---------GACGAATTGAAGTTCATG-ACCGCC------CTAATGATTTCTTAT--AACTT-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATC-------------------------------------AAT----------------------------------------------------
droSec2 scaffold_7:2092675-2092846 + dse-mir-100 Known_mirbase ---------GA--------AGTTCACG-ACCGCC------CTAATGATTTCTTAT--AACTC-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATC-------------------------------------AAT----------------------------------------------------
droYak3 2R:4988151-4988352 + dya-mir-100 Known_mirbase ---------GACGAATTGAGTTTCACG-ACCTCC------CTAATGATTTCTTAT--AACAT-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATC-------------------------------------AAT-GACAAATCTAA-AAAACGA-----------ATAA-----------------
droEre2 scaffold_4845:5800008-5800162 - der-mir-100 Known_mirbase -----------------------------------------TAATGATTTCTTAT--AACAT-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATC-------------------------------------AAT----------------------------------------------------
dp5 4_group3:3634681-3634864 + dps-mir-100 Known_mirbase ATG------GATAAATGGA--------TA------------AAAAAGTTTATAAAACAATAAAACAGAGAAACAAAATGGTGCATACTTATATATGGACCATTAACAGAAACCCGTAATTCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATT-------------------------------------TATC---------------------------------------------------
droPer2 scaffold_1:5115300-5115435 + dpe-mir-100-1 Known_mirbase --------------------------------------------------------------------------AAATGGTGCATACTTATATATGGACCATTAACAGAAACCCGTAATTCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATT-------------------------------------TATC---------------------------------------------------
droWil2 scf2_1100000004521:11622787-11622940 + dwi-mir-100 Known_mirbase ---------A----------------------------------GAATTTGTAAA--A---------------AAAATGGTGCATAGTCACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGCCAACAAAATCGA------------------------------------ATCGA-------------------------------------------------
droVir3 scaffold_12963:18449821-18449991 + dvi-mir-100 Known_mirbase --------------------------------------------------------------------------AAATGGTGCATACTCAAATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAAGACATATAAAATATATTAACAAAAATGACAAAAATGATCAA-----------------------------------------------------
droMoj3 scaffold_6500:6185687-6185842 - dmo-mir-100 Known_mirbase --------------------------------------------------------------------------AAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTTGGTTTTTGGC-AACAAAG-C-------------------------------------AAA-GCAACATTGAACAAATA-------------GAAA-----------------
droGri2 scaffold_15252:6427611-6427770 + dgr-mir-100 Known_mirbase ---------GCCAATATCAAATT---AT------AATCAAATAATGA--------------------------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTTTATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAA----------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
---------GATG---------------------------TTAAGGATTTGTAATCCAACTC------------AAATGGTGCATACTCACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTTTATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATC-------------------------------------AATCGA-ATG-------------TGTCACAATGAGAGA-----------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.............................................................................................................AACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................2212333.002333169711210639478
.............................................................................................................AACCCGTAAATCCGAACTTGT..........................................................................................................................................................................2111412.00141220830664210327
.............................................................................................................AACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................231654.006542810139333153
....................................................................................................................................................CAAGACCGGCATTATGGGAGTC..................................................................................................................................221455.00455203104413275
....................................................................................................................................................CAAGACCGGCATTATGGGAGT...................................................................................................................................211409.00409130002416887
..............................................................................................................ACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................211257.002571790010167
.............................................................................................................AACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................231107.00107360025244
....................................................................................................................................................CAAGACCGGCATTATGGGAG....................................................................................................................................20192.0092530052410
.............................................................................................................AACCCGTAAATCCGAACTTG...........................................................................................................................................................................20182.00826200839
....................................................................................................................................................CAAGACCGGCATTATGGGA.....................................................................................................................................19162.0062110013119
....................................................................................................................................................CAAGACCGGCATTATGGG......................................................................................................................................18154.005414009328
..............................................................................................................ACCCGTAAATCCGAACTTGT..........................................................................................................................................................................20151.0051170014515
....................................................................................................................................................CAAGACCGGCATTATGGGT.....................................................................................................................................19144.00443001931
..............................................................................................................ACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................22136.003612000024
...................................................................................................................................................ACAAGACCGGCATTATGGGAGT...................................................................................................................................22134.003480001115
..............................................................................................................ACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................22124.0024700647
.....................................................................................................................................................AAGACCGGCATTATGGGAGTC..................................................................................................................................21115.00151400010
...............................................................................................................CCCGTAAATCCGAACTTGTG.........................................................................................................................................................................20115.00151500000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTT..................................................................................................................................22115.0015900033
.............................................................................................................AACCCGTAAATCCGAACTTGTT.........................................................................................................................................................................22114.0014200309
...................................................................................................................................................ACAAGACCGGCATTATGGGAG....................................................................................................................................21114.0014500252
.....................................................................................................................................................AAGACCGGCATTATGGGAGT...................................................................................................................................20111.0011900110
.............................................................................................................AACCCGTAAATCCGAACTTGC..........................................................................................................................................................................21111.0011000632
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCT.................................................................................................................................23110.0010200224
............................................................................................................AAACCCGTAAATCCGAACTTGT..........................................................................................................................................................................2219.009100413
.............................................................................................................AACCCGTAAATCCGAACTTGA..........................................................................................................................................................................2118.008000233
..............................................................................................................ACCCGTAAATCCGAACTTG...........................................................................................................................................................................1918.008800000
..............................................................................................................ACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................2216.006500001
................................................................................................................CCGTAAATCCGAACTTGTG.........................................................................................................................................................................1916.006600000
...................................................................................................................................................ACAAGACCGGCATTATGGGA.....................................................................................................................................2016.006000321
............................................................................................................AAACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................2315.005400001
.....................................................................................................................................................AAGACCGGCATTATGGGAG....................................................................................................................................1915.005400010
.............................................................................................................AACCCGTAAATCCGAACTTGTA.........................................................................................................................................................................2215.005300101
.................................................................................................................CGTAAATCCGAACTTGTG.........................................................................................................................................................................1815.005400001
.............................................................................................................AACCCGTAAATCCGAACTTGTC.........................................................................................................................................................................2214.004200002
.............................................................................................................AACCCGTAAATCCGAACTTGG..........................................................................................................................................................................2114.004000400
.............................................................................................................AACCCGTAAATCCGAACTT............................................................................................................................................................................1914.004100201
.............................................................................................................AACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................2313.003000003
................................................................................................................CCGTAAATCCGAACTTGT..........................................................................................................................................................................1813.003300000
....................................................................................................................................................CAAGACCGGCATTATGGGAGA...................................................................................................................................2113.003100011
...................................................................................................................................................ACAAGACCGGCATTATGGG......................................................................................................................................1913.003100011
....................................................................................................................................................CAAGACCGGCATTATGGGAGTA..................................................................................................................................2212.002200000
.............................................................................................................AACCCGTAAATCCGAACTTGTCT........................................................................................................................................................................2312.002000200
.............................................................................................................AACCCGTAAATCCGAACT.............................................................................................................................................................................1812.002200000
.............................................................................................................AACCCGTAAATCCGAACTTT...........................................................................................................................................................................2012.002100001
.......................................................................................................................................................GACCGGCATTATGGGAGTCTGT...............................................................................................................................2212.002100010
..............................................................................................................ACCCGTAAATCCGAACTTGTA.........................................................................................................................................................................2112.002000002
.............................................................................................................AACCCGTAAATCCGAACTTGTGAA.......................................................................................................................................................................2412.002110000
......................................................................................................................................................AGACCGGCATTATGGGAGTC..................................................................................................................................2012.002100001
....................................................................................................................................................CAAGACCGGCATTATGGGAT....................................................................................................................................2011.001000001
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCG.................................................................................................................................2311.001100000
..............................................................................................................ACCCGTAAATCCGAACTTGTGCT.......................................................................................................................................................................2311.001000001
.....................................................................................................................................................AAGACCGGCATTATGGGAGTT..................................................................................................................................2111.001100000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCAAA...............................................................................................................................2511.001000001
...................................................................................................................................................ACAAGACCGGCATTATGGGAGA...................................................................................................................................2211.001000010
..............................................................................................................ACCCGTAAATCCGAACTTGTGG........................................................................................................................................................................2211.001000001
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCA.................................................................................................................................2311.001100000
.............................................................................................................AACCCGTAAATCCGAACTTGTGG........................................................................................................................................................................2311.001100000
................................................................................................................CCGTAAATCCGAACTTGTGCTGTTTTT.................................................................................................................................................................2711.001000010
................................................................................................................................................GTTACAAGACCGGCATTATGGGAGTC..................................................................................................................................2611.001100000
.................................................................................................................................................TTACAAGACCGGCATTATGGGA.....................................................................................................................................2211.001000100
droBip1
---------GACA---------------------------TAAAGGAGTTGTTATACAACTC------------AAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTTTATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATC-------------------------------------AAACGA-ATG-------------TGTCATAATGCGAGA-----------------SizeHit CountTotal NormTotal
No Reads
droKik1
---------AA----TGCAATT-C--GCA------------CAACGACTTCTAATCCAACACAAGAAA-----GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATC-------------------------------------AA-----------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
---------AA-GAAAACAATTTCAAGCACCGAC------TAAACGATTTCTAATCCAACAC-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AGCAAAATCAA------------------------------------AT-GA-------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
---------GACGAATTCTATTTCAAGGACCAAC------TAAACAATTTCTAATCCAACAC-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATCAA------------------------------------AT-GA-------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
---------GACGAATTAAATTTCAAGTACCAAC------TAAACGATTTCAAATCCAACAC-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATCGA------------------------------------AT-GACAAATCTAA-AACA---TGT---AAT----GA-----------------SizeHit CountTotal NormTotal
No Reads
droBia1
CTTACCA-GGCCGAATTCA---------------------------ATTTCTAATCCAACAC-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATCGA------------------------------------GT-AACATATCAA-----------------------A-----------------SizeHit CountTotal NormTotal
No Reads
droTak1
ATTCCTATAGACCAATTCAATTTCAAGGACCGCC------GAAATGACTTCTAATTCGACAC-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACTAAATCTA------------------------------------AT-GACAAATGTAA-T------------AATGGCGGAGTAAGGTTTAAAAGTTASizeHit CountTotal NormTotal
No Reads
droEug1
---------A----ATTCTATTTCAGGGACCGCC------TAAATGATTTCTAATCCAACAC-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTT-TTGGC-AACAAAAT---------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
---------GA--------AGTTCACG-ACCGCC------CTAATGATTTCTTAT--AACTT-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATC-------------------------------------AAT-GACAAATCGAA-AAATCGA-----------CAAA-----------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.............................................................................................................AACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................221116892.00116892000053210101951606510025160146221920012321535191772168350380781008171864655888350130867585881118936000213245630000000000000000049413151134012000129434701062020614847201562407952122945585260301842236911284815209630710798243595611551615316010207122022572110006820312495116879735568570000000000052054615029524762552646192356219111693095173542871118005007728502014351151443212411200000152700000000010016515415755353592519474976022427443785450910910001009718151503790118917691103242711007312524202189700001118266334899676433140033335529032145592911654368290306301226393549500105174129220311668127001170602436625525761001150146
.............................................................................................................AACCCGTAAATCCGAACTTGT..........................................................................................................................................................................21135099.00350990000141000000102001001932421800006142993462201226251315975371644293821225261181200063512500000000000000000912814360000000849611212851001671850005018245030316423359340072231070552616401100601900010058841175353665302541170000010012010571115060242440392183297874391293540000014492451642015600026321591802000174300300000033173719131352841770481660542635849010031000000581806301108309085120031812006114827702268420002121350209111916911425045000110910805405786831219144002132751544164415334038323934501211339247353574536927610152114247614869108871055031100
....................................................................................................................................................CAAGACCGGCATTATGGGAGTC..................................................................................................................................22114854.0014854000032000000003102410021730504922126143113010101862111151520225101315161580001010000000000000000010005000000021151240131736005824865003091850202120434000001201113300000000040000133383828342752310297000005080001326908112764239144162297380273100000442145719490337138150000011167192001008214460157229220531300000001014322300158303800010144001322190123871100515320323117001221263266255352425408138464571586814611072910011600531572392020113842379289450305235410362251061271142506017019
.............................................................................................................AACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................23111786.001178600002001000000500000128200000000000514697101516715916613162063000000000000000000000002002001000000101201361300702410010171000023870801171414014000000000010000403331213634141111700000100000455802201382202504988570000012297158313000550653000004240001000204514536951913202214337700002000000951200054780322000033216301077001169010060514133632776174923900129304263246292310001929549761190391521933012372820011023127613461622313040020503678373121021101271293001000
....................................................................................................................................................CAAGACCGGCATTATGGGAGT...................................................................................................................................2117629.00762900001000000000111000001122100206445114104160101333164245310002000000000000000000002000000000002030033500526000601710000102190002020004301000000000000014121012138361026000000000100439802538263125061048117812000001361547446001102610000001410618600001658286210310000000000000001213010045402400000100012224012333100021552062351520058109124691021320012312251118821311603452002542826131524263175188180126029710531677576140153300500
.............................................................................................................AACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................2312978.00297800001000000000100000200000100000000131012221121202211000000000000000000000002311010000000000004530020100001003000001027402015640320150000100030000004112331211400000000000989505900582813518511180000001611109200060900000063000000000134413106185508673945356100030150000042611004570037100001220000679000451000996158813106619001173362878210700106037221691031500158951103480014061572753000501
..............................................................................................................ACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................2112317.0023170000500000000010204000000000521047490204011000200301100100001530000000000000000001014000000002172027712001210431001033000011323481210313110125151000000000000000001011433310000000000013813408875595713502924116213000001991012000000400000000000000006111146424492444536630000000000026100017230110000010000000400015000021011211612000227811110031000600010000613100001400301900002000004
.............................................................................................................AACCCGTAAATCCGAACTTG...........................................................................................................................................................................2011669.0016690000110000000000000000110002144044011020000010200100011000433000000000000000000201000000000000009040000180000000000000224181601351211014900030000000000001000900010000000000011930306442295364421001591900000120112000030200000000000000000614241734264113391313000010000004300001043170000010000002000140000041803010001269692300120101010123000000000040000011200010000001
....................................................................................................................................................CAAGACCGGCATTATGGGAG....................................................................................................................................2011048.001048000000000000002000000019000210000001011000100010102110000000000000000000000000001000000000000052500105100001000000006001000000000100000000000000000017000000000000000158605722071162742000001504380020200000001001040000384200000000010000000001300001604000001000002101061000000001100000202021151529005423020133710350063102006013183001402384181771221200100
............................................................................................................AAACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................231982.0098200002000000000230010000000001018160100110000000000023000002400000000000000000000300100000000021022600259000300610000011214010010841030100000002000000000200180000000000000003739027002918018128042180000051000000000000000000000000000540053413484523442370000100000001000048080000040000011000100000080006010000233020001002000200000011000001000100010000000002
............................................................................................................AAACCCGTAAATCCGAACTTGT..........................................................................................................................................................................221567.0056700000000000000000000110000000000000000000010011000402000110000000000000000000010000000000000000200010160000000000000030000102030020000000000000000302113050000000000000181501600151307017028000000392110000402000000010000000007171013392612971400000000000140000421100000400000010009000011229413050002671111140071012800464500146100023800304122100000200
..............................................................................................................ACCCGTAAATCCGAACTTGT..........................................................................................................................................................................201416.00416000000000000000000001000000000000000000001000000000100003100000000000000000000002000000001030010100000000200000000007201021104020000000000000000000117000000000000000222601500167070191216000004101200004000000000100000000004110836022300000000000020000040200000100000120005000008033180300004710131800200034004142000230000124000001200011100000
.............................................................................................................AACCCGTAAATCCGAACTTGTC.........................................................................................................................................................................221337.00337000000000000100100000000000000000000000001010010010010000000000000000000000000000000000000010000000000100000100000100400020601122000000000000000001101000000000000000271201800194111764100000125001000010000000000000000000010053759466000000000001101001300000000000000000000000050103020000203030000001030000000000000000000000100000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTA.........................................................................................................................................................................221249.0024900003500001140320100000000000000000000002100000010000000000000000000000000000000000000000001100020013210000010000021330205070101100000000000000001100000000000000000021180176687473112510000031000000000000000000000000000140112210003000040000000001000302000000000000000020000000001000000022060000000000000000000000000000000000000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTT.........................................................................................................................................................................221241.0024100000000000000000000000000000000000001050110042012103000000000000000000000000000000000000000001000012000000000000000124020125061115000000000000000043002003000000000000712071093110512400000141010000001000000010000000000120002111270000000000040000071003000000001000000010000030302010002453360000021010100000001000002000000010000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................231208.002080000010000000000000000000000000000000000000000010000000024297000000000000000000000000000000000000000000400000010000000430001241100000000000000000000000300000000000000023030023110002000000900000000000000000000000000001012000032000001000000000000200500000200000000000000019012114020001421130010002210340400000000002100100301001000000
....................................................................................................................................................CAAGACCGGCATTATGGGA.....................................................................................................................................191197.00197000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000012100000000000000050020000000500000002102100000300000000000030000011200000000000000000000000000201000000000000000020000000002000000794520010010000321400100010032182050143799096100000
.............................................................................................................AACCCGTAAATCCGAACTTGG..........................................................................................................................................................................211190.0019000001000000000000000000000000000000000000001001010000000000000000000000000000001000000000000000000000100000000000000000000000200100000000000000000000200000000000000087030020010252390000005000000000010000000000000000000000031000000000000000000002001000001000000100000000111200100012167112010000030202201300000000000000000000000000000
.............................................................................................................AACCCGTAAATCCGAACTTGC..........................................................................................................................................................................211182.0018200000000000000000000000000000000000000000000000000201000000000000000000000001000000000000000000000000000000000000010000000000200000000000100000000100401000000000000051106008201020151000002401010000010000000100000000011110010110000000000000010000100000010010000000000000001818150400021012350001001020470100000000000000001100000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTATC.......................................................................................................................................................................241181.00181000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013942000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................CAAGACCGGCATTATGGG......................................................................................................................................181150.00150000000000000000000000000000200000000000100000000000000000000000000000000000000000000000000000010000000000000000000001001000000000000000000000000000102000000000000000140112003001801000000000000000000000000000000000000000000000000000000000100000403000000000000100010000000000000000016882300110200001102000100000000001042252245000000
.............................................................................................................AACCCGTAAATCCGAACTT............................................................................................................................................................................191130.001300000000000000000000001000000300000001000001000000000000000000000000000000000000000000000000000100000000000000000000020000000011200007000002000000001000000000000000002650400000041161000000100100000000000000000000000110102115011000000000000000000100000000000000000000000001000000000100110000001000000000000000000000000001000000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCT.................................................................................................................................231127.001270000000000000000000000000000000000000000002000020101100000000000000000000000000000000000000000003000000000001000000010000001000010000000000000001021020140000000000001903103002025000000042010000000000000000000000000000000000000000000000000000003000000000000000000100000232130200001212500110013000014000110000115000021031221000000
............................................................................................................AAACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................241113.00113000000000000000000000000000000000000001000011000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000005000000000000000120100100100060000000501200000000000000000000000120000111101000000000000100000000000001100000100020000053403030000314410010002012114100012000001200305344001000000
...................................................................................................................................................ACAAGACCGGCATTATGGGAGT...................................................................................................................................221107.001070000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000001000100000000000000001100000000000000000000000000000000000000000000003011000000000000000000000000000000000000000000000200000514084500001222200100100321133002240000421000003830130000000
.............................................................................................................AACCCGTAAATCCGAACT.............................................................................................................................................................................181103.0010300000000000000000000000000003200000000000000000000000000010000000000000000000000000000000000000000001000000000000000000000000010000134000000000000000000000000000000000090110102031006000000000000000000000000000000000110101700100000000000000000000000000000000000100020000000000000000000200001000000000000000000000000000000000000000
....................................................................................................................................................CAAGACCGGCATTATGGGT.....................................................................................................................................19190.009000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000003001001000010000000000010000000000000000000000000010000000000000000000000000010000000000000000000000000000000000006110500000000000000000000000002002092672126000000
.....................................................................................................................................................AAGACCGGCATTATGGGAGTC..................................................................................................................................21183.0083000000000000000000000000000010000000000000000020000100000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000304000000000000000210210200010920000001000000000000000000000000000011100000000001000000000000000100000001000000000040000000000000001041020000010002010000610000000900002510102000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTT..................................................................................................................................22178.0078000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000040000000011000000000000002000000000011000000000000000000001000000000000000160000000001600000000000000000000000000000000000021100000000000000000000000000201000000000000000070000010100000000102300000010100033500500000001200000800100000000
.............................................................................................................AACCCGTAAATCCGAACTTGTGAA.......................................................................................................................................................................24178.0078000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011100010000000000000001000000000000000000000000000100001000000000000000550400001201040000001101000000000000000000000000010001011211000000000000000000000000001000000300010000020213020003003130011001200111000010000020000001000000000000
.............................................................................................................AACCCGTAAATCCGAACTTGA..........................................................................................................................................................................21173.00730000110000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000200000000000000000000000000000000000002706000100010101000004001000010000000000000000000000000010000000000000000000000000000000000000100020000031020000000630310010002201020000100000000000000000000000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGA...................................................................................................................................21172.00720000100000000000000000200000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000003300100010001000000000000000000000000020000000000000000000000000000000000000001000000000000000000300000000000000013011200000000000600002100000000800202200010100000
..............................................................................................................ACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................22166.0066000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100003000000000000000000000000001000000000000000000000000000000000000000000110000010000001200000000000000000000000000200000000100000000000000000000100000001000000000010000010422010001320570032000000020100612000000200100100000000000
..............................................................................................................ACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................22165.0065000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000100010100001000000000000010200000101000000000000000000000001000000000000000340600100001040000003000020000000000000000000000010033203421100000000000000001100000001000000000000000000002000000001000000001000000000100000000000000000001000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGG...................................................................................................................................21165.00650000000000000000000000000000000000000000000000103100000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000001101000020011320000000000000000000000000000000000001000000000000000000000000000000000000000000000030000000010000004333220000010001031200100000010300001100010000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTA..................................................................................................................................22165.00650000000000000000000000000000000000000000002000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221030000000000004100000161118020000000010000000000000000000000000000000000000000000000000000001000000000000000000000000000000100040020010000000000500001000000001100001000000000100
.................................................................................................................CGTAAATCCGAACTTGTG.........................................................................................................................................................................18164.0064000000000000000000001001000000000001000001001000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000010008000300000000000020000051300100000001000000000000000000000000000331100002002000000000000000000000000000000000000000000001000120000301040000000100000000002000000000000000000000005
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCA.................................................................................................................................23161.0061000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000010020100100000000000000000000000001000000000000000000000000110000000000000120100100101110000000201000000000000010002000000100000000000000000000000000000000000000000000000030000200010010002001110000000001130200010000020600000401102000000
................................................................................................................CCGTAAATCCGAACTTGTG.........................................................................................................................................................................19158.0058000000000000000000000000000000000000000000000000000010000000000000000000000000100000000000000000000003000000000000000000000001010000000000000000020101000000000000000230100000201030000004000000000000000000000000000110033210251000000000000000000000000000000000000000000040002000000110000000000000000000000000000000000000000000004
............................................................................................................AAACCCGTAAATCCGAACTTG...........................................................................................................................................................................21148.0048000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010100010000000000000000003001100000000000000000000000000000000000000000740300010103050000002000100000000000000000000000030002210010000000000000000001000000000000000000000000000100000000000010000000000000000000000000000000000000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTGG........................................................................................................................................................................23146.0046000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110100100003170000000000000000000000000000000000000010111010000000000000000000000000000000000100000000030202000000410410000010000111200100000000000000000010000000
...............................................................................................................CCCGTAAATCCGAACTTGTG.........................................................................................................................................................................20144.0044000000000000001000000000000000000000000000000000000000001000000000000000000000000000000000001120200220000001000000000100000100001000000000000000000000000000000000000130100220000020000003100000000000000000000000000110000200000000000000000000000001000000000000000000000140000110000000000000000000000100000000000000000000000000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGC...................................................................................................................................21142.0042000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030100000000201000000000000000000000000000000000010000000000000000000000000000000000000000000000010000001001100001110300000001000030000800000010800001200000000000
..............................................................................................................ACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................22140.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000100000100000000000000000000000000000000000000000410000300002010000003000000000000000000000000000000010101010000020000000000000000000000000000000000000000114000000010350000000000000000000000000000100000000000000
.....................................................................................................................................................AAGACCGGCATTATGGGAGT...................................................................................................................................20140.00400000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000010000000000000000200200010000000000000010000100000000000000000000001000000000000000000000000000000000000000000000200000000000000000002000100000000000001000000019001011000001000000
.....................................................................................................................................................AAGACCGGCATTATGGGAGTCT.................................................................................................................................22138.0038000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027000000000000000000000000000000000000000000000003000000000000000010000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000010000140111010000000030010000001110200001000000100000200000000000
.......................................................................................................................................................GACCGGCATTATGGGAGTCTGT...............................................................................................................................22136.0036000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000001000000000000000000000100011000000000000000010000000100000000000001000000000000000000000000000100001000000000000000000000000000000000000000000000010000000000021300020000000200200012000001000001600110000000
............................................................................................................AAACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................24134.0034000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000100000000000000000000000000000000000000000100000000000000000006000000000000000000000000000020022022021000020000000000000000000000000000000010000000100000000001000000000100100100000000000000000000000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTTT........................................................................................................................................................................23133.0033000000000000000000000000000000000000001010000000010000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000001002000000000000000020000000000000000000000000000000000000000000000000100000000000000000000100000200000000000000000000000010101010000301100000010020002300000000000000001010001000000
droSim2
---------GACGAATTGAAGTTCATG-ACCGCC------CTAATGATTTCTTAT--AACTT-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATC-------------------------------------AAT----------------------------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.............................................................................................................AACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................22116077.0016077171540482103193802668341988111780008
.............................................................................................................AACCCGTAAATCCGAACTTG...........................................................................................................................................................................2013233.00323317264401823961989103005002001
.............................................................................................................AACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................2313213.0032130001917228249000000000
.............................................................................................................AACCCGTAAATCCGAACTTGT..........................................................................................................................................................................2113037.0030375690473331296224204008570011000
.............................................................................................................AACCCGTAAATCCGAACTT............................................................................................................................................................................1911005.001005100130768332008000000
.............................................................................................................AACCCGTAAATCCGAACT.............................................................................................................................................................................181967.009671140029964500008000000
.............................................................................................................AACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................231711.0071102010003613172412003000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTC..................................................................................................................................221400.0040013148110131412012414149001
.............................................................................................................AACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................231163.0016310060059310065001000
..............................................................................................................ACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................211124.0012460042123240001000000
............................................................................................................AAACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................231113.001131006136140100000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGT...................................................................................................................................21170.00701400833860030025000
............................................................................................................AAACCCGTAAATCCGAACTTGT..........................................................................................................................................................................22147.0047000253140005000000
............................................................................................................AAACCCGTAAATCCGAACTTG...........................................................................................................................................................................21138.0038212015701000001000
..............................................................................................................ACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................22135.0035000092132000000000
..............................................................................................................ACCCGTAAATCCGAACTTG...........................................................................................................................................................................19127.0027192002400000000000
....................................................................................................................................................CAAGACCGGCATTATGGGAG....................................................................................................................................20122.0022300123000020011000
............................................................................................................AAACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................24122.0022000022000000000000
...............................................................................................................CCCGTAAATCCGAACTTGT..........................................................................................................................................................................19120.0020162010001000000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCT.................................................................................................................................23119.001971010200000008000
.............................................................................................................AACCCGTAAATCCGAA...............................................................................................................................................................................16119.0019000000020017000000
............................................................................................................AAACCCGTAAATCCGAAC..............................................................................................................................................................................18118.0018000041400000000000
..............................................................................................................ACCCGTAAATCCGAACTTGT..........................................................................................................................................................................20118.0018000311100003000000
.............................................................................................................AACCCGTAAATCCGA................................................................................................................................................................................15116.0016000000000016000000
...............................................................................................................CCCGTAAATCCGAACTTGTG.........................................................................................................................................................................20114.001473010003000000000
..............................................................................................................ACCCGTAAATCCGAACTT............................................................................................................................................................................18112.0012000011100000000000
............................................................................................................AAACCCGTAAATCCGAACT.............................................................................................................................................................................19111.001100002900000000000
............................................................................................................AAACCCGTAAATCCGAACTT............................................................................................................................................................................20111.001100003800000000000
....................................................................................................................................................CAAGACCGGCATTATGGG......................................................................................................................................18110.001000002800000000000
....................................................................................................................................................CAAGACCGGCATTATGGGA.....................................................................................................................................19110.001000004130002000000
...............................................................................................................CCCGTAAATCCGAACTTG...........................................................................................................................................................................1817.00761000000000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTA.........................................................................................................................................................................2217.00700010024000000000
.............................................................................................................AACCCGTAAATCCGAACTTGG..........................................................................................................................................................................2117.00741000000002000000
.................................................................................................................CGTAAATCCGAACTTGTG.........................................................................................................................................................................1815.00522010000000000000
............................................................................................................AAACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................2415.00500010022000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTT.........................................................................................................................................................................2215.00500000014000000000
.............................................................................................................AACCCGTAAATCCGAAC..............................................................................................................................................................................1715.00500000020003000000
................................................................................................................CCGTAAATCCGAACTTGT..........................................................................................................................................................................1815.00540000000001000000
............................................................................................................AAACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................2414.00400000020002000000
.....................................................................................................................................................AAGACCGGCATTATGGGAGTC..................................................................................................................................2114.00410010000000011000
.........................................................................................................................................................CCGGCATTATGGGAGTC..................................................................................................................................1713.00300000000003000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCA.................................................................................................................................2313.00300000000000012000
........................................................................................................................................................ACCGGCATTATGGGAGTC..................................................................................................................................1812.00200000000002000000
.....................................................................................................................................................AAGACCGGCATTATGGGAGT...................................................................................................................................2012.00200000100001000000
..................................................................................................................GTAAATCCGAACTTGTG.........................................................................................................................................................................1712.00200000000002000000
..............................................................................................................ACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................2212.00200010001000000000
.............................................................................................................AACCCGTAAATCCGAACTTGC..........................................................................................................................................................................2112.00220000000000000000
.................................................................................................................CGTAAATCCGAACTTGTGCTG......................................................................................................................................................................2112.00200000000000002000
.................................................................................................................CGTAAATCCGAACTTGT..........................................................................................................................................................................1712.00200000000002000000
.............................................................................................................AACCCGTAAATCCGAACTTGTGG........................................................................................................................................................................2312.00200000001001000000
................................................................................................................CCGTAAATCCGAACTTGTG.........................................................................................................................................................................1912.00200000011000000000
............................................................................................TATGGACCATTAACAGAAACC...........................................................................................................................................................................................2112.00202000000000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTGAA.......................................................................................................................................................................2412.00210000000001000000
.............................................................................................................AACCCGTAAATCCGAACTTGTCA........................................................................................................................................................................2311.00100000000001000000
.............................................................................................................AACCCGTAAATCCGAACTTGTGCT.......................................................................................................................................................................2411.00100000100000000000
...............................................................................................................CCCGTAAATCCGAACTTGTGT........................................................................................................................................................................2111.00110000000000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTGCGCG.....................................................................................................................................................................2611.00100000000001000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCC.................................................................................................................................2311.00110000000000000000
..........................................................................................................................................................CGGCATTATGGGAGTC..................................................................................................................................1611.00100000000001000000
............................................................................................................AAACCCGTAAATCCGAACTTGTGAA.......................................................................................................................................................................2511.00110000000000000000
...............................................................................................................CCCGTAAATCCGAACTTGC..........................................................................................................................................................................1911.00110000000000000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTA..................................................................................................................................2211.00100000000000001000
.............................................................................................................AACCCGTAAATCCGAACTTGTGGGT......................................................................................................................................................................2511.00100000000001000000
.............................................................................................ATGGACCATTAACAGAAACC...........................................................................................................................................................................................2011.00101000000000000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGG...................................................................................................................................2111.00100010000000000000
.............................................................................................................AACCCGTAAATCCGAACC.............................................................................................................................................................................1811.00110000000000000000
.................................................................................................................CGTAAATCCGAACTTGTGA........................................................................................................................................................................1911.00101000000000000000
.......................................................................................................................TCCGAACTTGTGCTGTTTTATATCTGTT.........................................................................................................................................................2811.00100000010000000000
........................................................................................................................................................ACCGGCATTATGGGAGT...................................................................................................................................1711.00100000000001000000
.......................................................................................................................................................GACCGGCATTATGGGAGTCTGT...............................................................................................................................2211.00100000001000000000
....................................................................................................................................TGTTTTATATCTGTTACAAG....................................................................................................................................................2011.00110000000000000000
..............................................................................................................................TTGTGCTGTTTTATATCTGTTACA......................................................................................................................................................2411.00110000000000000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCTT................................................................................................................................2411.00100010000000000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCAA................................................................................................................................2411.00100000000000001000
..........................................................................................CATATGGACCATTAACAGAAACC...........................................................................................................................................................................................2311.00110000000000000000
.............................................................................................................AACCCGTAAATCCGAACTTTG..........................................................................................................................................................................2111.00100000010000000000
droSec2
---------GA--------AGTTCACG-ACCGCC------CTAATGATTTCTTAT--AACTC-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATC-------------------------------------AAT----------------------------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.............................................................................................................AACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................2211934.0019341305782549
.............................................................................................................AACCCGTAAATCCGAACTTGT..........................................................................................................................................................................2111309.0013091594051744
.............................................................................................................AACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................231661.00661263990236
....................................................................................................................................................CAAGACCGGCATTATGGGAGT...................................................................................................................................211413.00413262000187
....................................................................................................................................................CAAGACCGGCATTATGGGAGTC..................................................................................................................................221390.00390701780142
.............................................................................................................AACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................231145.001452628091
..............................................................................................................ACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................211135.001351152018
.............................................................................................................AACCCGTAAATCCGAACTTG...........................................................................................................................................................................20162.0062330029
............................................................................................................AAACCCGTAAATCCGAACTTGT..........................................................................................................................................................................22138.003843031
....................................................................................................................................................CAAGACCGGCATTATGGGAG....................................................................................................................................20135.0035712016
............................................................................................................AAACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................23125.002522003
..............................................................................................................ACCCGTAAATCCGAACTTGT..........................................................................................................................................................................20123.002316007
....................................................................................................................................................CAAGACCGGCATTATGGGT.....................................................................................................................................19117.001702015
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCT.................................................................................................................................23115.00154605
....................................................................................................................................................CAAGACCGGCATTATGGGA.....................................................................................................................................19111.00110605
.............................................................................................................AACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................2318.0083302
............................................................................................................AAACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................2417.0070403
.....................................................................................................................................................AAGACCGGCATTATGGGAGT...................................................................................................................................2016.0061203
.............................................................................................................AACCCGTAAATCCGAACTTGTT.........................................................................................................................................................................2216.0062202
.....................................................................................................................................................AAGACCGGCATTATGGGAGTC..................................................................................................................................2116.0064002
................................................................................................................CCGTAAATCCGAACTTGTG.........................................................................................................................................................................1915.0055000
..............................................................................................................ACCCGTAAATCCGAACTTGTT.........................................................................................................................................................................2115.0055000
....................................................................................................................................................CAAGACCGGCATTATGGG......................................................................................................................................1814.0041003
.................................................................................................................CGTAAATCCGAACTTGTG.........................................................................................................................................................................1814.0044000
...................................................................................................................................................ACAAGACCGGCATTATGGGAGT...................................................................................................................................2214.0040202
..............................................................................................................ACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................2214.0041201
...............................................................................................................CCCGTAAATCCGAACTTGTG.........................................................................................................................................................................2014.0044000
.....................................................................................................................................................AAGACCGGCATTATGGGAGTCT.................................................................................................................................2213.0030003
.............................................................................................................AACCCGTAAATCCGAACTTGTGTA.......................................................................................................................................................................2413.0030102
..............................................................................................................ACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................2213.0030003
.............................................................................................................AACCCGTAAATCCGAACTTGTGAA.......................................................................................................................................................................2413.0030102
....................................................................................................................................................CAAGACCGGCATTATGGGAGTT..................................................................................................................................2213.0031002
..............................................................................................................ACCCGTAAATCCGAACTTG...........................................................................................................................................................................1913.0033000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCA.................................................................................................................................2312.0020101
..............................................................................................................ACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................2212.0021001
.............................................................................................................AACCCGTAAATCCGAACTTGTA.........................................................................................................................................................................2212.0020002
.............................................................................................................AACCCGTAAATCCGAACTTGG..........................................................................................................................................................................2112.0022000
....................................................................................................................................................CAAGACCGGCATTATGGGAGG...................................................................................................................................2112.0021001
.............................................................................................................AACCCGTAAATCCGAACTTGTGTC.......................................................................................................................................................................2411.0010100
.............................................................................................................AACCCGTAAATCCGAACTTGTTT........................................................................................................................................................................2311.0011000
.....................................................................................................................................................AAGACCGGCATTATGGGAG....................................................................................................................................1911.0011000
.............................................................................................................AACCCGTAAATCCGAACTTGTGCC.......................................................................................................................................................................2411.0011000
....................................................................................................................................................CAAGACCGGCATTATGGGC.....................................................................................................................................1911.0010001
.............................................................................................ATGGACCATTAACAGAAACCC..........................................................................................................................................................................................2111.0011000
...............................................................................................................CCCGTAAATCCGAACTTGTGGC.......................................................................................................................................................................2211.0011000
.............................................................................................................AACCCGTAAATCCGAACTTGTGG........................................................................................................................................................................2311.0010001
...............................................................................................................CCCGTAAATCCGAACTTGTC.........................................................................................................................................................................2011.0011000
....................................................................................................................................................................................AACAACT-GGTTTTTGGC-AACA.................................................................................................2111.0011000
.............................................................................................................AACCCGTAAATCCGAACTT............................................................................................................................................................................1911.0010100
.............................................................................................................AACCCGTAAATCCGAACT.............................................................................................................................................................................1811.0011000
....................................................................................................................................................CAAGACCGGCATTATGGGAGA...................................................................................................................................2111.0010100
.....................................................................................................................................................AAGACCGGCATTATGGGA.....................................................................................................................................1811.0010100
..............................................................................................................ACCCGTAAATCCGAACTTGTGCA.......................................................................................................................................................................2311.0010001
......................................................................................................................................................AGACCGGCATTATGGGAGT...................................................................................................................................1911.0010001
......................................................................................................................................TTTTATATCTGTTACAAGACCGGCAT............................................................................................................................................2611.0011000
...................................................................................................................................................ACAAGACCGGCATTATGGGAG....................................................................................................................................2111.0010100
.............................................................................................................AACCCGTAAATCCGAACTTGTAT........................................................................................................................................................................2311.0010001
......................................................................................................................................................AGACCGGCATTATGGGAGTC..................................................................................................................................2011.0010001
...........................................................................................................GAAACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................2411.0011000
..............................................................................................................................................CTGTTACAAGACCGGCATTATGGGAGTC..................................................................................................................................2811.0011000
.............................................................................................................AACCCGTAAATCCGAACTTGC..........................................................................................................................................................................2111.0010001
............................................................................................................AAACCCGTAAATCCGAACTTGTTT........................................................................................................................................................................2411.0010001
....................................................................................................................................................CAAGACCGGCATTATGGAGT....................................................................................................................................2080.1310001
droYak3
---------GACGAATTGAGTTTCACG-ACCTCC------CTAATGATTTCTTAT--AACAT-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATC-------------------------------------AAT-GACAAATCTAA-AAAACGA-----------ATAA-----------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.............................................................................................................AACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................2214936.004936534401352127291260010
.............................................................................................................AACCCGTAAATCCGAACTTGT..........................................................................................................................................................................2111880.00188014604402937881770000
.............................................................................................................AACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................231526.0052605800591802290000
.............................................................................................................AACCCGTAAATCCGAACTTG...........................................................................................................................................................................201461.0046135292205910000
..............................................................................................................ACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................211401.004011394001500000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTC..................................................................................................................................221214.002142363101441710100
.............................................................................................................AACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................231106.0010625900113310000
....................................................................................................................................................CAAGACCGGCATTATGGGAGT...................................................................................................................................21171.007112100811300000
..............................................................................................................ACCCGTAAATCCGAACTTGT..........................................................................................................................................................................20165.00650460061030000
............................................................................................................AAACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................23134.0034031000300000
............................................................................................................AAACCCGTAAATCCGAACTTGT..........................................................................................................................................................................22125.0025011003830000
...............................................................................................................CCCGTAAATCCGAACTTGTG.........................................................................................................................................................................20118.0018216000000000
....................................................................................................................................................CAAGACCGGCATTATGGGAG....................................................................................................................................20118.001806004530000
.............................................................................................................AACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................23114.001407000520000
..............................................................................................................ACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................22114.0014013000010000
.................................................................................................................CGTAAATCCGAACTTGTG.........................................................................................................................................................................18113.0013013000000000
..............................................................................................................ACCCGTAAATCCGAACTTG...........................................................................................................................................................................19110.001037000000000
................................................................................................................CCGTAAATCCGAACTTGTG.........................................................................................................................................................................19110.0010010000000000
............................................................................................................AAACCCGTAAATCCGAACTTG...........................................................................................................................................................................2118.00853000000000
.............................................................................................................AACCCGTAAATCCGAACTTGC..........................................................................................................................................................................2118.00800001700000
.............................................................................................................AACCCGTAAATCCGAACT.............................................................................................................................................................................1817.00733001000000
.............................................................................................................AACCCGTAAATCCGAACTTGTT.........................................................................................................................................................................2217.00706000100000
....................................................................................................................................................CAAGACCGGCATTATGGGA.....................................................................................................................................1917.00700002230000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCT.................................................................................................................................2316.00602001120000
....................................................................................................................................................CAAGACCGGCATTATGGG......................................................................................................................................1816.00604000200000
.....................................................................................................................................................AAGACCGGCATTATGGGAGTC..................................................................................................................................2116.00605000100000
.............................................................................................................AACCCGTAAATCCGAACTTGTGG........................................................................................................................................................................2316.00624000000000
.............................................................................................................AACCCGTAAATCCGAACTT............................................................................................................................................................................1915.00522000010000
....................................................................................................................................................CAAGACCGGCATTATGGGT.....................................................................................................................................1914.00402000020000
..............................................................................................................ACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................2214.00402000110000
...............................................................................................................CCCGTAAATCCGAACTTGT..........................................................................................................................................................................1914.00440000000000
.............................................................................................................AACCCGTAAATCCGAACTTGG..........................................................................................................................................................................2114.00420000200000
...............................................................................................................................................TGTTACAAGACCGGCATTATG........................................................................................................................................2113.00330000000000
............................................................................................................AAACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................2413.00301001100000
.......................................................................................................................................................GACCGGCATTATGGGAGTCTGT...............................................................................................................................2212.00201001000000
..............................................................................................................ACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................2212.00201100000000
.............................................................................................................AACCCGTAAATCCGAACTTGTC.........................................................................................................................................................................2212.00202000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTGAA.......................................................................................................................................................................2412.00202000000000
...............................................................................................................CCCGTAAATCCGAACTTG...........................................................................................................................................................................1812.00220000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTA.........................................................................................................................................................................2212.00202000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTTT........................................................................................................................................................................2312.00201000100000
....................................................................................................................................................CAAGACCGGCATTATGGGAGG...................................................................................................................................2112.00200000110000
.....................................................................................................................................................AAGACCGGCATTATGGGAGT...................................................................................................................................2012.00201000010000
................................................................................................................CCGTAAATCCGAACTTGT..........................................................................................................................................................................1812.00220000000000
...............................................................................................................................TGTGCTGTTTTATATCTGTTACA......................................................................................................................................................2312.00220000000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCA.................................................................................................................................2311.00100000100000
..................................................................................................................GTAAATCCGAACTTGTGT........................................................................................................................................................................1811.00101000000000
..................................................................................................................GTAAATCCGAACTTGT..........................................................................................................................................................................1611.00100000100000
...............................................................................................................................................TGTTACAAGACCGGCATTATGGGT.....................................................................................................................................2411.00100000100000
.................................................................................................................CGTAAATCCGAACTTGTGA........................................................................................................................................................................1911.00101000000000
..............................................................................................................ACCCGTAAATCCGAACTTGTT.........................................................................................................................................................................2111.00101000000000
....................................................................................................................................................CAAGACCGGCATTATGG.......................................................................................................................................1711.00100000100000
....................................................................................................................................................CAAGACCGGCATTATGGGTT....................................................................................................................................2021.00210000100000
..............ATTGAGTTTCACG-ACCTCC------CTAAT...............................................................................................................................................................................................................................................................2411.00101000000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGA...................................................................................................................................2111.00101000000000
.....................................................................................................................................................AAGACCGGCATTATGGGAG....................................................................................................................................1911.00101000000000
.............................................................................................................AACCCGTAAATCCGAACTTTG..........................................................................................................................................................................2111.00101000000000
.............................................................................................................AACCCGTAAATCCGA................................................................................................................................................................................1511.00100000000010
.........................................................................................................CAGAAACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................2611.00101000000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCC.................................................................................................................................2311.00101000000000
droEre2
-----------------------------------------TAATGATTTCTTAT--AACAT-----------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATC-------------------------------------AAT----------------------------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.............................................................................................................AACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................2215679.00567941182136014212765
.............................................................................................................AACCCGTAAATCCGAACTTGT..........................................................................................................................................................................2112558.002558491029407749954
.............................................................................................................AACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................2311710.001710730880108843031
....................................................................................................................................................CAAGACCGGCATTATGGGAGTC..................................................................................................................................221509.005096701012122190
..............................................................................................................ACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................211405.004053390703560
....................................................................................................................................................CAAGACCGGCATTATGGGAGT...................................................................................................................................211322.003223301801621090
.............................................................................................................AACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................231279.002798301502614411
.............................................................................................................AACCCGTAAATCCGAACTTG...........................................................................................................................................................................201151.001511090304350
....................................................................................................................................................CAAGACCGGCATTATGGGAG....................................................................................................................................20177.00771902031250
..............................................................................................................ACCCGTAAATCCGAACTTGT..........................................................................................................................................................................20174.0074420409190
....................................................................................................................................................CAAGACCGGCATTATGGGT.....................................................................................................................................19154.0054100019340
....................................................................................................................................................CAAGACCGGCATTATGGG......................................................................................................................................18146.004630008350
............................................................................................................AAACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................23146.0046280001125
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCG.................................................................................................................................23144.004400000044
............................................................................................................AAACCCGTAAATCCGAACTTGT..........................................................................................................................................................................22134.003430804190
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCT.................................................................................................................................23128.0028200011150
....................................................................................................................................................CAAGACCGGCATTATGGGA.....................................................................................................................................19124.002410101480
...................................................................................................................................................ACAAGACCGGCATTATGGGAGT...................................................................................................................................22122.002210209100
.............................................................................................................AACCCGTAAATCCGAACTTGTT.........................................................................................................................................................................22122.002212000280
..............................................................................................................ACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................22118.001820000160
.............................................................................................................AACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................23117.001730101120
...............................................................................................................CCCGTAAATCCGAACTTGTG.........................................................................................................................................................................20117.001716000010
..............................................................................................................ACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................22113.00138010220
..............................................................................................................ACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................22113.00137000150
.................................................................................................................CGTAAATCCGAACTTGTG.........................................................................................................................................................................18113.00139010030
.....................................................................................................................................................AAGACCGGCATTATGGGAGTC..................................................................................................................................21112.00129000120
............................................................................................................AAACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................24110.00100020530
.............................................................................................................AACCCGTAAATCCGAACTTGTGAA.......................................................................................................................................................................2418.0084000310
.............................................................................................................AACCCGTAAATCCGAACTT............................................................................................................................................................................1918.0083010220
................................................................................................................CCGTAAATCCGAACTTGTG.........................................................................................................................................................................1918.0087000100
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCA.................................................................................................................................2317.0072000140
.............................................................................................................AACCCGTAAATCCGAACTTGTGG........................................................................................................................................................................2316.0062010030
.............................................................................................................AACCCGTAAATCCGAACTTGG..........................................................................................................................................................................2116.0064010010
..............................................................................................................ACCCGTAAATCCGAACTTG...........................................................................................................................................................................1916.0066000000
.............................................................................................................AACCCGTAAATCCGAACTTGTA.........................................................................................................................................................................2216.0063000120
.....................................................................................................................................................AAGACCGGCATTATGGGAG....................................................................................................................................1915.0052000120
.....................................................................................................................................................AAGACCGGCATTATGGGAGT...................................................................................................................................2014.0043000100
............................................................................................................AAACCCGTAAATCCGAACTTG...........................................................................................................................................................................2114.0043000010
.....................................................................................................................................................AAGACCGGCATTATGGGAGTCT.................................................................................................................................2214.0041000120
.............................................................................................................AACCCGTAAATCCGAACTTGTGTA.......................................................................................................................................................................2414.0040000220
....................................................................................................................................................CAAGACCGGCATTATGGGAGA...................................................................................................................................2113.0032010000
....................................................................................................................................................CAAGACCGGCATTATGGGAGC...................................................................................................................................2113.0031000020
...............................................................................................................................................TGTTACAAGACCGGCATTATGG.......................................................................................................................................2213.0030000030
....................................................................................................................................................CAAGACCGGCATTATGGT......................................................................................................................................1813.0030000030
..............................................................................................................ACCCGTAAATCCGAACTTGTT.........................................................................................................................................................................2113.0031010010
....................................................................................................................................................CAAGACCGGCATTATGGGAT....................................................................................................................................2012.0021000100
.............................................................................................................AACCCGTAAATCCGAACTTGTTT........................................................................................................................................................................2312.0021000010
..............................................................................................................ACCCGTAAATCCGAACTTGTGG........................................................................................................................................................................2212.0022000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTA..................................................................................................................................2212.0021000010
..............................................................................................................ACCCGTAAATCCGAACTTGTGAA.......................................................................................................................................................................2312.0022000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTT..................................................................................................................................2212.0020000200
...............................................................................................................CCCGTAAATCCGAACTTGTGA........................................................................................................................................................................2112.0022000000
..............................................................................................................ACCCGTAAATCCGAACTT............................................................................................................................................................................1812.0021000010
.............................................................................................................AACCCGTAAATCCGAACTTGC..........................................................................................................................................................................2112.0020010010
...............................................................................................................................................TGTTACAAGACCGGCATTATGGG......................................................................................................................................2312.0020000020
.............................................................................................................AACCCGTAAATCCGAACTTGTAA........................................................................................................................................................................2312.0021000100
................................................................................................................CCGTAAATCCGAACTTGT..........................................................................................................................................................................1812.0020000020
.............................................................................................................AACCCGTAAATCCGAACTTGTC.........................................................................................................................................................................2212.0021000010
....................................................................................................................................................CAAGACCGGCATTATGGGAGG...................................................................................................................................2112.0022000000
.............................................................................................................AACCCGTAAATCCGAACTTGA..........................................................................................................................................................................2112.0020010010
...................................................................................................................................................ACAAGACCGGCATTATGGG......................................................................................................................................1912.0020000110
...................................................................................................................................................ACAAGACCGGCATTATGGGAG....................................................................................................................................2112.0020000110
......................................................................................................................................................AGACCGGCATTATGGGAGTC..................................................................................................................................2011.0010000100
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCC.................................................................................................................................2311.0010000100
............................................................................................................AAACCCGTAAATCCGAACTTGTT.........................................................................................................................................................................2311.0010000100
.......................................................................................................................................................GACCGGCATTATGGGAGTCTGT...............................................................................................................................2211.0010000010
dp5
ATG------GATAAATGGA--------TA------------AAAAAGTTTATAAAACAATAAAACAGAGAAACAAAATGGTGCATACTTATATATGGACCATTAACAGAAACCCGTAATTCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATT-------------------------------------TATC---------------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.............................................................................................................AACCCGTAATTCCGAACTTGTG.........................................................................................................................................................................2211011.0010110581012309451029016
.............................................................................................................AACCCGTAATTCCGAACTTGT..........................................................................................................................................................................211435.004350640360295235120
....................................................................................................................................................CAAGACCGGCATTATGGGAGTC..................................................................................................................................221272.00272313804703249021
....................................................................................................................................................CAAGACCGGCATTATGGGAGT...................................................................................................................................211113.001130531301739000
.............................................................................................................AACCCGTAATTCCGAACTTGTGT........................................................................................................................................................................231104.001040120205928030
.............................................................................................................AACCCGTAATTCCGAACTTG...........................................................................................................................................................................20186.008607903040000
..............................................................................................................ACCCGTAATTCCGAACTTGTG.........................................................................................................................................................................21176.007606102083110
....................................................................................................................................................CAAGACCGGCATTATGGGAG....................................................................................................................................20150.0050028010810210
.....................................................................................................................................................AAGACCGGCATTATGGGAGTC..................................................................................................................................21123.002302100002000
..............................................................................................................ACCCGTAATTCCGAACTTGT..........................................................................................................................................................................20116.00160500092000
.............................................................................................................AACCCGTAATTCCGAACTTGTGA........................................................................................................................................................................23115.001501102020000
.....................................................................................................................................................AAGACCGGCATTATGGGAGT...................................................................................................................................20114.001401400000000
............................................................................................................AAACCCGTAATTCCGAACTTGTG.........................................................................................................................................................................23113.00130503000410
....................................................................................................................................................CAAGACCGGCATTATGGGA.....................................................................................................................................1919.0090200016000
............................................................................................................AAACCCGTAATTCCGAACTTGT..........................................................................................................................................................................2219.0090002050110
....................................................................................................................................................CAAGACCGGCATTATGGG......................................................................................................................................1818.0080700010000
..............................................................................................................ACCCGTAATTCCGAACTTG...........................................................................................................................................................................1918.0080701000000
...............................................................................................................................................TGTTACAAGACCGGCATTATGGG......................................................................................................................................2317.0070100060000
.................................................................................................................CGTAATTCCGAACTTGTG.........................................................................................................................................................................1816.0060600000000
.............................................................................................................AACCCGTAATTCCGAACTTGC..........................................................................................................................................................................2116.0060004020000
.............................................................................................................AACCCGTAATTCCGAACTTGTA.........................................................................................................................................................................2216.0060006000000
.....................................................................................................................................................AAGACCGGCATTATGGGAG....................................................................................................................................1915.0050500000000
...................................................................................................................................................ACAAGACCGGCATTATGGGAGT...................................................................................................................................2215.0050300002000
..............................................................................................................ACCCGTAATTCCGAACTTGTGC........................................................................................................................................................................2215.0050101011100
....................................................................................................................................................CAAGACCGGCATTATGGGAGTT..................................................................................................................................2214.0040400000000
...................................................................................................................................................ACAAGACCGGCATTATGGGAG....................................................................................................................................2114.0040201010000
................................................................................................................CCGTAATTCCGAACTTGTG.........................................................................................................................................................................1914.0040301000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCC.................................................................................................................................2314.0040202000000
............................................................................................................AAACCCGTAATTCCGAACTTG...........................................................................................................................................................................2114.0040400000000
...............................................................................................................................................TGTTACAAGACCGGCATTATG........................................................................................................................................2113.0030101010000
...............................................................................................................CCCGTAATTCCGAACTTGTG.........................................................................................................................................................................2013.0030300000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCA.................................................................................................................................2313.0030300000000
...............................................................................................................................................TGTTACAAGACCGGCATTATGG.......................................................................................................................................2213.0030101010000
.....................................................................................................................................................AAGACCGGCATTATGGGAGTCT.................................................................................................................................2213.0030201000000
.............................................................................................................AACCCGTAATTCCGAACTTGTT.........................................................................................................................................................................2213.0030100020000
.....................................................................................................................................................AAGACCGGCATTATGGGA.....................................................................................................................................1812.0020200000000
.......................................................................................................................................................GACCGGCATTATGGGAGTCTGT...............................................................................................................................2212.0020100010000
....................................................................................................................................................CAAGACCGGCATTATGGGAA....................................................................................................................................2012.0020002000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCT.................................................................................................................................2312.0020200000000
..............................................................................................................ACCCGTAATTCCGAACTTGTGT........................................................................................................................................................................2212.0020000001010
..............................................................................................................ACCCGTAATTCCGAACTTGTGA........................................................................................................................................................................2212.0020200000000
......................................................................................................................................................AGACCGGCATTATGGGAGT...................................................................................................................................1911.0010100000000
.............................................................................................................AACCCGTAATTCCGAACTTGGA.........................................................................................................................................................................2211.0010001000000
.............................................................................................................AACCCGTAATTCCGAACT.............................................................................................................................................................................1811.0010100000000
........................................................................................................................................................ACCGGCATTATGGGAGTCTGT...............................................................................................................................2111.0010000010000
.............................................................................................................AACCCGTAATTCCGAACTTA...........................................................................................................................................................................2011.0010001000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCTTA...............................................................................................................................2511.0010000000010
.............................................................................................................AACCCGTAATTCCGAACTT............................................................................................................................................................................1911.0010100000000
............................................................................................................AAACCCGTAATTCCGAACTTGTGT........................................................................................................................................................................2411.0010000010000
...........................................................................................................................................TATCTGTTACAAGACCGGCATTATGGGA.....................................................................................................................................2811.0010000001000
.................................................................................................................CGTAATTCCGAACTTGTGA........................................................................................................................................................................1911.0010100000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGA...................................................................................................................................2111.0010001000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTA..................................................................................................................................2211.0010100000000
..............................................................................................................ACCCGTAATTCCGAACTTGTTT........................................................................................................................................................................2211.0010000010000
......................................................................................................................................................AGACCGGCATTATGGGAGTC..................................................................................................................................2011.0010100000000
...............................................................................................................CCCGTAATTCCGAACTTG...........................................................................................................................................................................1811.0010100000000
.............................................................................................................AACCCGTAATTCCGAACTTGTC.........................................................................................................................................................................2211.0010001000000
.............................................................................................................AACCCGTAATTCCGAACTTT...........................................................................................................................................................................2011.0010100000000
.............................................................................................................AACCCGTAATTCCGAACTTGTGAA.......................................................................................................................................................................2411.0010100000000
.............................................................................................................AACCCGTAATTCCGAACTTGTGC........................................................................................................................................................................2311.0010100000000
...........................................................................................................................................TATCTGTTACAAGACCGGCATTATGGG......................................................................................................................................2711.0010100000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGC...................................................................................................................................2120.5010001000000
droPer2
--------------------------------------------------------------------------AAATGGTGCATACTTATATATGGACCATTAACAGAAACCCGTAATTCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAATT-------------------------------------TATC---------------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.............................................................................................................AACCCGTAATTCCGAACTTGT..........................................................................................................................................................................212362.5072509035932928
.............................................................................................................AACCCGTAATTCCGAACTTGTG.........................................................................................................................................................................222127.50255073079985
.............................................................................................................AACCCGTAATTCCGAACTTGTGT........................................................................................................................................................................232110.502210107111138
....................................................................................................................................................CAAGACCGGCATTATGGGAGTC..................................................................................................................................222106.5021301902912738
....................................................................................................................................................CAAGACCGGCATTATGGGAGT...................................................................................................................................21234.5069060112527
..............................................................................................................ACCCGTAATTCCGAACTTGTG.........................................................................................................................................................................21211.50230100850
..............................................................................................................ACCCGTAATTCCGAACTTGT..........................................................................................................................................................................20210.00200101090
....................................................................................................................................................CAAGACCGGCATTATGGGAG....................................................................................................................................2029.5019020386
............................................................................................................AAACCCGTAATTCCGAACTTGT..........................................................................................................................................................................2229.0018000972
.............................................................................................................AACCCGTAATTCCGAACTTGTGA........................................................................................................................................................................2327.0014010481
.............................................................................................................AACCCGTAATTCCGAACTTG...........................................................................................................................................................................2025.5011070040
....................................................................................................................................................CAAGACCGGCATTATGGGAGTT..................................................................................................................................2223.507020131
..............................................................................................................ACCCGTAATTCCGAACTTGTGT........................................................................................................................................................................2223.006000330
............................................................................................................AAACCCGTAATTCCGAACTTGTGT........................................................................................................................................................................2422.505000212
....................................................................................................................................................CAAGACCGGCATTATGGGA.....................................................................................................................................1922.004000121
............................................................................................................AAACCCGTAATTCCGAACTTGTG.........................................................................................................................................................................2321.503010020
.......................................................................................................................................................GACCGGCATTATGGGAGTCTGT...............................................................................................................................2221.503000021
..............................................................................................................ACCCGTAATTCCGAACTTGTGC........................................................................................................................................................................2221.503010110
...............................................................................................................................................TGTTACAAGACCGGCATTATGGG......................................................................................................................................2321.503000210
...............................................................................................................................................TGTTACAAGACCGGCATTATGG.......................................................................................................................................2221.503000111
...................................................................................................................................................ACAAGACCGGCATTATGGGAGT...................................................................................................................................2221.503000111
....................................................................................................................................................CAAGACCGGCATTATGGGAGA...................................................................................................................................2121.503000030
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCT.................................................................................................................................2321.503000021
...................................................................................................................................................ACAAGACCGGCATTATGGGAG....................................................................................................................................2121.503000012
.....................................................................................................................................................AAGACCGGCATTATGGGAGT...................................................................................................................................2021.002000002
.....................................................................................................................................................AAGACCGGCATTATGGGAGTC..................................................................................................................................2121.002010100
.............................................................................................................AACCCGTAATTCCGAACTTGC..........................................................................................................................................................................2121.002000110
....................................................................................................................................................CAAGACCGGCATTATGGG......................................................................................................................................1820.501000010
..............................................................................GGTGCATACTTATATATGGAC.........................................................................................................................................................................................................2120.501010000
............................................................................................................AAACCCGTAATTCCGAACTTG...........................................................................................................................................................................2120.501010000
...............................................................................................................................................TGTTACAAGACCGGCATTATGGGT.....................................................................................................................................2420.501000001
.............................................................................................................AACCCGTAATTCCGAACTTGTGAA.......................................................................................................................................................................2420.501010000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCA.................................................................................................................................2320.501000010
.....................................................................................................................................................AAGACCGGCATTATGGGAGTCT.................................................................................................................................2220.501000010
.......................................................................................................................................................GACCGGCATTATGGGAGTCTGTT..............................................................................................................................2320.501000001
.................................................................................................................................................TTACAAGACCGGCATTATGGGAGT...................................................................................................................................2420.501000100
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCC.................................................................................................................................2320.501000010
....................................................................................................................................................CAAGACCGGCATTATGGGAGTA..................................................................................................................................2220.501010000
.............................................................................................................AACCCGTAATTCCGAACTTGTGC........................................................................................................................................................................2320.501000100
.............................................................................................................AACCCGTAATTCCGAACTTGTT.........................................................................................................................................................................2220.501000010
...................................................................................................................................................ACAAGACCGGCATTATGGG......................................................................................................................................1920.501000010
.............................................................................................................AACCCGTAATTCCGAACTTGG..........................................................................................................................................................................2120.501000010
..............................................................................................................ACCCGTAATTCCGAACTTG...........................................................................................................................................................................1920.501000010
..............................................................................................................ACCCGTAATTCCGAACTTGTGA........................................................................................................................................................................2220.501000100
.............................................................................................................AACCCGTAATTCCGAACTT............................................................................................................................................................................1920.501000010
.................................................................................................................CGTAATTCCGAACTTGTG.........................................................................................................................................................................1820.501000010
.............................................................................................................AACCCGTAATTCCGAACTTGA..........................................................................................................................................................................2120.501000010
....................................................................................................................................................CAAGACCGGCATTATGGGAA....................................................................................................................................2020.501000010
.............................................................................................................AACCCGTAATTCCGAACTTGCC.........................................................................................................................................................................2220.501000010
droWil2
---------A----------------------------------GAATTTGTAAA--A---------------AAAATGGTGCATAGTCACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGCCAACAAAATCGA------------------------------------ATCGA-------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.............................................................................................................AACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................2213635.00363513026072531842
.............................................................................................................AACCCGTAAATCCGAACTTG...........................................................................................................................................................................2011334.0013341261521119
.............................................................................................................AACCCGTAAATCCGAACTTGT..........................................................................................................................................................................211977.009775225314517510
....................................................................................................................................................CAAGACCGGCATTATGGGAGTC..................................................................................................................................221430.0043013535430217
.............................................................................................................AACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................231275.002750131345123
..............................................................................................................ACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................211262.0026252160140
.............................................................................................................AACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................231128.0012813843550
....................................................................................................................................................CAAGACCGGCATTATGGGAGT...................................................................................................................................21198.009831520060
............................................................................................................AAACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................23142.0042529008
..............................................................................................................ACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................22138.0038010037
..............................................................................................................ACCCGTAAATCCGAACTTGT..........................................................................................................................................................................20134.0034024109
............................................................................................................AAACCCGTAAATCCGAACTTGT..........................................................................................................................................................................22131.0031068017
....................................................................................................................................................CAAGACCGGCATTATGGGAG....................................................................................................................................20128.0028013906
...................................................................................................................................................ACAAGACCGGCATTATGGGAGT...................................................................................................................................22120.0020125012
............................................................................................................AAACCCGTAAATCCGAACTTG...........................................................................................................................................................................21118.0018141003
...............................................................................................................CCCGTAAATCCGAACTTGTG.........................................................................................................................................................................20118.0018215001
.................................................................................................................CGTAAATCCGAACTTGTG.........................................................................................................................................................................18116.0016411001
..............................................................................................................ACCCGTAAATCCGAACTTG...........................................................................................................................................................................19115.0015104001
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCT.................................................................................................................................23111.001131403
..............................................................................................................ACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................22110.001006004
................................................................................................................CCGTAAATCCGAACTTGT..........................................................................................................................................................................1817.00761000
.............................................................................................................AACCCGTAAATCCGAACTTGTGAA.......................................................................................................................................................................2417.00701051
..............................................................................................................ACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................2217.00700205
...................................................................................................................................................ACAAGACCGGCATTATGGGAG....................................................................................................................................2117.00701105
....................................................................................................................................................CAAGACCGGCATTATGGGA.....................................................................................................................................1915.00501202
.....................................................................................................................................................AAGACCGGCATTATGGGAGTC..................................................................................................................................2115.00502102
.............................................................................................................AACCCGTAAATCCGAACTTGTGG........................................................................................................................................................................2315.00502201
....................................................................................................................................................CAAGACCGGCATTATGGG......................................................................................................................................1814.00400004
.............................................................................................................AACCCGTAAATCCGAACT.............................................................................................................................................................................1814.00440000
......................................................................................................................................................AGACCGGCATTATGGGAGTC..................................................................................................................................2014.00421100
................................................................................................................CCGTAAATCCGAACTTGTG.........................................................................................................................................................................1914.00413000
................................................................................................................................GTGCTGTTTTATATCTGTTACA......................................................................................................................................................2213.00330000
.............................................................................................................AACCCGTAAATCCGAACTTGG..........................................................................................................................................................................2113.00330000
.....................................................................................................................................................AAGACCGGCATTATGGGAGT...................................................................................................................................2012.00201001
.....................................................................................................................................................AAGACCGGCATTATGGGAGTCT.................................................................................................................................2212.00201100
...............................................................................................................CCCGTAAATCCGAACTTGT..........................................................................................................................................................................1912.00220000
.....................................................................................................................................................AAGACCGGCATTATGGGAG....................................................................................................................................1912.00202000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTA..................................................................................................................................2212.00200101
...............................................................................................................................................TGTTACAAGACCGGCATTATG........................................................................................................................................2112.00220000
.............................................................................................................AACCCGTAAATCCGAACTTGTT.........................................................................................................................................................................2212.00201001
.............................................................................................................AACCCGTAAATCCGAACTT............................................................................................................................................................................1912.00210001
.........................................................................................ACATATGGACCATTAACAG................................................................................................................................................................................................1912.00220000
.............................................................................................................................................TCTGTTACAAGACCGGCATTATGGGA.....................................................................................................................................2612.00220000
..............................................................................................................ACCCGTAAATCCGAACTTGC..........................................................................................................................................................................2012.00200002
.............................................................................................................AACCCGTAAATCCGAACTTGTC.........................................................................................................................................................................2212.00201100
....................................................................................................................................................CAAGACCGGCATTATGGGT.....................................................................................................................................1912.00200101
............................................................................................................AAACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................2412.00200101
.............................................................................................................AACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................2312.00201001
...............................................................................................................CCCGTAAATCCGAACTTG...........................................................................................................................................................................1812.00220000
.............................................................................................................AACCCGTAAATCCGAACTG............................................................................................................................................................................1911.00101000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCC.................................................................................................................................2311.00100001
...........................................................................................................GAAACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................2411.00101000
.............................................................................................................AACCCGTAAATCCGAACTTGTGAAA......................................................................................................................................................................2511.00100010
.......................................................................................................................................................GACCGGCATTATGGGAGTCTGT...............................................................................................................................2211.00100001
....................................................................................................................................................CAAGACCGGCATTATGGA......................................................................................................................................1811.00101000
.............................................................................................ATGGACCATTAACAGAAACC...........................................................................................................................................................................................2011.00110000
.............................................................................................................AACCCGTAAATCCGAACTTGTTT........................................................................................................................................................................2311.00101000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTT..................................................................................................................................2211.00100100
.............................................................................................................AACCCGTAAATCCGAACTTGC..........................................................................................................................................................................2111.00110000
...................................................................................................................................................ACAAGACCGGCATTATGGGAGTC..................................................................................................................................2311.00101000
..............................................................................................................ACCCGTAAATCCGAACTTGTGAA.......................................................................................................................................................................2311.00101000
.............................................................................................................................................TCTGTTACAAGACCGGCATTATGGGG.....................................................................................................................................2611.00110000
.............................................................................................................AACCCGTAAATCCGAACTTGTAA........................................................................................................................................................................2311.00101000
.............................................................................................................AACCCGTAAATCCGAACTTGTGTA.......................................................................................................................................................................2411.00100010
..............................................................................................................ACCCGTAAATCCGAACTTGTAA........................................................................................................................................................................2211.00101000
..............................................................................................................ACCCGTAAATCCGAACTTGTGG........................................................................................................................................................................2211.00101000
droVir3
--------------------------------------------------------------------------AAATGGTGCATACTCAAATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAAGACATATAAAATATATTAACAAAAATGACAAAAATGATCAA-----------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.............................................................................................................AACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................22122617.00226171733885221441268241542700094335723562436126967591528252913094072541270117647714872623201216200000000000000000310259367587156628511622204164108921881791774766685
.............................................................................................................AACCCGTAAATCCGAACTTGT..........................................................................................................................................................................21120986.00209862111375180453160712573800115298335061096136876732918081283181215203313207153214117211775435744218449300000000000000000270198140401248121647111151317626263736
.............................................................................................................AACCCGTAAATCCGAACTTG...........................................................................................................................................................................2013280.0032801092722300120000000053241634281446442175438810066158040000050000001010000001012520344001010235627328022734927100126
.............................................................................................................AACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................2313158.00315800110015111525113971200112466461271206315210917832241934221342597319301310001371640000000000000000010019636107712000000006322
.............................................................................................................AACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................2312314.00231401118019111330006828166646331447828141429875643382013061061100000000000000000130157901582091714312104113215176230243
.............................................................................................................AACCCGTAAATCCGAACTTGTC.........................................................................................................................................................................2211447.00144700330977700800001811414208974224106885200226803010620000410900000000000000000000152803010130000000311
....................................................................................................................................................CAAGACCGGCATTATGGGAGTC..................................................................................................................................2211045.00104514217601426210660000442710151814413044111512117403822390250000161400000000000000000400258503900058254029563300100
..............................................................................................................ACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................2111003.0010030077500100020000261639430141507136201451702000000000000000000000000001020102701020300202010
.............................................................................................................AACCCGTAAATCCGAACTTGTGAA.......................................................................................................................................................................241792.0079200300000000001212211024000323211100010110000000000000000050010020150147200000011110983107121
.............................................................................................................AACCCGTAAATCCGAACTTGTGAAA......................................................................................................................................................................251368.0036800100001000000100000001000000000000001000000000000000000000010020707410000000656305757
....................................................................................................................................................CAAGACCGGCATTATGGGAGT...................................................................................................................................211302.00302022604141118000016671012478960424209280700003600000000000000000000246501000001003000100
..............................................................................................................ACCCGTAAATCCGAACTTGT..........................................................................................................................................................................201241.002410011901002000000141038671105110116561204000013000000000000000001008500000000000000000
............................................................................................................AAACCCGTAAATCCGAACTTGT..........................................................................................................................................................................221184.00184001500420000000176111012120161101215910013010000000000000000000000000021200000100000001010
.............................................................................................................AACCCGTAAATCCGAACTTGTGTCC......................................................................................................................................................................251147.001470010050006000001002013120000014166480120000016000000000000000000000300000000000001000
............................................................................................................AAACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................231126.00126005500000100000101042401301013213400010000000000000000000000005005630010403000002
.............................................................................................................AACCCGTAAATCCGAACTTGTGTC.......................................................................................................................................................................241103.00103001005000100000200121121101000111241604000006000000000000000000001900000000000001200
....................................................................................................................................................CAAGACCGGCATTATGGGAG....................................................................................................................................20182.008200901311000000040341222010005743080000030000000000000000000051100000002000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTA.........................................................................................................................................................................22172.0072005100000000001000000000000010833001000001000000000000000000000004011100100103000
.............................................................................................................AACCCGTAAATCCGAACTTGTT.........................................................................................................................................................................22171.00710070020000000030262142610021474703000000000000000000000000003200200000000000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCT.................................................................................................................................23165.00650130000001000072124136300100651505000002000000000000000000003200000000001000000
.............................................................................................................AACCCGTAAATCCGAACT.............................................................................................................................................................................18153.005303110000000000010210000100000101000000000000000000000000002001000200053079200100
.............................................................................................................AACCCGTAAATCCGAACTTGC..........................................................................................................................................................................21152.005200101210100000050010233110001210030000150000000000000000000013300000000100000000
...............................................................................................................CCCGTAAATCCGAACTTGTG.........................................................................................................................................................................20149.004915430000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................CGTAAATCCGAACTTGTG.........................................................................................................................................................................18149.004911210010001000031000000201031121200000000000000000000000000000000000020120200000
.............................................................................................................AACCCGTAAATCCGAACTT............................................................................................................................................................................19135.00350090020000000020121001000000125200000001000000000000000002001003000000000000000
..............................................................................................................ACCCGTAAATCCGAACTTG...........................................................................................................................................................................19131.003104150000000000000000000000000110000000000000000000000000001000000000013103000100
.............................................................................................................AACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................23131.00310040000000100011000002200000223400000000000000000000000000004200100000000000110
................................................................................................................CCGTAAATCCGAACTTGTG.........................................................................................................................................................................19129.002901150000010000001000000000100200101000000000000000000000000000002100000001200000
..............................................................................................................ACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................22126.00260080000000000031010000000000210000000000000000000000000000001000110000000011311
..............................................................................................................ACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................22126.002600130000000000000002100000010021200000000000000000000000000002001000000000000001
............................................................................................................AAACCCGTAAATCCGAACTTG...........................................................................................................................................................................21122.00220020000000000020010002100010102100000000000000000000000000001000010010302100000
.............................................................................................................AACCCGTAAATCCGAACTTGA..........................................................................................................................................................................21118.00180020000000000021001030000000220100000001000000000000000000003000000000000000000
................................................................................................................CCGTAAATCCGAACTTGT..........................................................................................................................................................................18117.00170240010000000011010000000100010100000000000000000000000001000000000011100000000
.............................................................................................................AACCCGTAAATCCGAACTTGTCT........................................................................................................................................................................23117.00170010001000000000010010000000240401000001000000000000000000001000000000000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTGG........................................................................................................................................................................23117.001700110000100000000000000000000010000000000000000000000000002001100000000000000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCA.................................................................................................................................23116.00160030000000000010002201000100200200000000000000000000000000001100000000000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTGTA.......................................................................................................................................................................24114.00140000000000000000001010000000241100000000000000000000000000001000020000000000100
...................................................................................................................................................ACAAGACCGGCATTATGGGAGT...................................................................................................................................22114.00140000010001000020010000200000110100000000000000000000000000000200000000002000000
..............................................................................................................ACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................22113.00130020000000000020010000000010000100000000000000000000000000000000401000000000001
.............................................................................................................AACCCGTAAATCCGAACTTGG..........................................................................................................................................................................21112.00121010010000000013100000200000000001000000000000000000000000001000000000000000000
....................................................................................................................................................CAAGACCGGCATTATGGGA.....................................................................................................................................19112.00120000100000000100000000100000120000000000000000000000000000000600000000000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTTT........................................................................................................................................................................23111.00110000001100000000000101100000010000000000000000000000000000000500000000000000000
.....................................................................................................................................................AAGACCGGCATTATGGGAGTC..................................................................................................................................21110.00100080000000000000000000000000000002000000000000000000000000000000000000000000000
....................................................................................................................................................CAAGACCGGCATTATGGG......................................................................................................................................18110.00100110000000000000010000100000110001000001000000000000000000002000000000000000000
............................................................................................................AAACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................24110.00100010000000000021000001300000000100000000000000000000000000000100000000000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTGTAA......................................................................................................................................................................25110.00100000000000000000000000000000010000000100000000000000000000000000011100000012110
.............................................................................................................AACCCGTAAATCCGAACTTGTAA........................................................................................................................................................................2319.0090000000000000000000000000000000100000000000000000000000000000000031001000010101
.....................................................................................................................................................AAGACCGGCATTATGGGAGTCT.................................................................................................................................2219.0090010001000000000110021000000011000000000000000000000000000000000000000000000000
..............................................................................................................ACCCGTAAATCCGAACTTGTC.........................................................................................................................................................................2118.0080030000000000000000000000000210100000000000000000000000000001000000000000000000
...............................................................................................................CCCGTAAATCCGAACTTGT..........................................................................................................................................................................1918.0080240000000000001000001000000000000000000000000000000000000000000000000000000000
............................................................................................................AAACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................2418.0080000000000000000010000000000000000000000000000000000000000000000001000000002103
....................................................................................................................................................CAAGACCGGCATTATGGGAGTT..................................................................................................................................2217.0070020000000000000100100000000200000000000000000000000000000000100000000000000000
.................................................................................................................CGTAAATCCGAACTTGTGT........................................................................................................................................................................1917.0070010002000000000000000000000000202000000000000000000000000000000000000000000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCC.................................................................................................................................2317.0070000000000000000010030000000010100000000000000000000000000000000000001000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTGCC.......................................................................................................................................................................2417.0070000000000000001000010100000111001000000000000000000000000000000000000000000000
....................................................................................................................................................CAAGACCGGCATTATGGGT.....................................................................................................................................1917.0070010000000000000000000000000000000000001000000000000000000003200000000000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTCA........................................................................................................................................................................2317.0070010000000000000000000000000110100000001000000000000000000000000010000000001000
.............................................................................................................AACCCGTAAATCCGAACTTGTAAA.......................................................................................................................................................................2417.0070000000000000000000000000000100000000000000000000000000000000000021000000000012
.............................................................................................................AACCCGTAAATCCGAACTTGTGTCT......................................................................................................................................................................2515.0050000000000000000000000000000010400000000000000000000000000000000000000000000000
.................................................................................................................CGTAAATCCGAACTTGT..........................................................................................................................................................................1715.0050000000000000000000000000000000000000000000000000000000005000000000000000000000
......................................................................................................................................................AGACCGGCATTATGGGAGTC..................................................................................................................................2015.0050130000000000000000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................CAAGACCGGCATTATGGGTT....................................................................................................................................2014.0040000000000000000000002000000000000000010000000000000000000001000000000000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTGAAC......................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000030000000000100
............................................................................................................AAACCCGTAAATCCGAACTTGTGAAA......................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000001000000002010
............................................................................................................AAACCCGTAAATCCGAACTTGTGAA.......................................................................................................................................................................2514.0040000000000000000000000000000000100000000000000000000000000000000011000000000100
............................................................................................................AAACCCGTAAATCCGAACTTGTC.........................................................................................................................................................................2314.0040000000000000000000100100000020000000000000000000000000000000000000000000000000
.....................................................................................................................................................AAGACCGGCATTATGGGAGT...................................................................................................................................2013.0030000000000000000000000000000000003000000000000000000000000000000000000000000000
.............................................................................................................AACCCGTAAATCCGAAC..............................................................................................................................................................................1713.0030000000000000000000000000000000000000000000000000000000000000000120000000000000
....................................................................................................................................................CAAGACCGGCATTATGGGAGA...................................................................................................................................2113.0030020000000000000000000100000000000000000000000000000000000000000000000000000000
.............................................................................................................AACCCGTAAATCCGAACTTGCC.........................................................................................................................................................................2213.0030000000000000000000020000000000000000000000000000000000000000001000000000000000
.............................................................................................................AACCCGTAAATCCGAACTTGTGAC.......................................................................................................................................................................2413.0030000000000000000010000000000000000000000000000000000000000000000010000000000010
........................................................................................................................................................ACCGGCATTATGGGAGTC..................................................................................................................................1813.0030100000000000000000000100000000000000000000000000000000000000000000001000000000
...............................................................................................................CCCGTAAATCCGAACTTG...........................................................................................................................................................................1813.0030000000000000000000000000000010000000000000000000000000000000000000000110000000
................................................................................................................CCGTAAATCCGAACTTGTGA........................................................................................................................................................................2013.0030020000000000000000000000000000000000000000000000000000000000000000000000100000
droMoj3
--------------------------------------------------------------------------AAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTATATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACTTGGTTTTTGGC-AACAAAG-C-------------------------------------AAA-GCAACATTGAACAAATA-------------GAAA-----------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.............................................................................................................AACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................2218431.008431784151332789579
.............................................................................................................AACCCGTAAATCCGAACTTGT..........................................................................................................................................................................2113002.0030021083147310446395
..............................................................................................................ACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................211821.00821803051012
.............................................................................................................AACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................231713.00713630992390312
....................................................................................................................................................CAAGACCGGCATTATGGGAGTC..................................................................................................................................221427.004271013558421163
.............................................................................................................AACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................231219.0021911803454112
.............................................................................................................AACCCGTAAATCCGAACTTG...........................................................................................................................................................................201197.00197170091161
....................................................................................................................................................CAAGACCGGCATTATGGGAGT...................................................................................................................................211169.001693811736077
..............................................................................................................ACCCGTAAATCCGAACTTGT..........................................................................................................................................................................201126.00126104081301
.............................................................................................................AACCCGTAAATCCGAACTTGTC.........................................................................................................................................................................221110.00110400724039
.............................................................................................................AACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................231104.001049602141
.............................................................................................................AACCCGTAAATCCGAACTTGTGTC.......................................................................................................................................................................24185.008570510063
...............................................................................................................CCCGTAAATCCGAACTTGTG.........................................................................................................................................................................20150.00504900100
............................................................................................................AAACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................23148.00484601100
............................................................................................................AAACCCGTAAATCCGAACTTGT..........................................................................................................................................................................22129.00291206902
..............................................................................................................ACCCGTAAATCCGAACTTG...........................................................................................................................................................................19125.00252401000
..............................................................................................................ACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................22123.00232101100
.............................................................................................................AACCCGTAAATCCGAACTTGTT.........................................................................................................................................................................22123.0023905603
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCT.................................................................................................................................23122.0022206806
.................................................................................................................CGTAAATCCGAACTTGTG.........................................................................................................................................................................18120.00202000000
................................................................................................................CCGTAAATCCGAACTTGTG.........................................................................................................................................................................19119.00191900000
.....................................................................................................................................................AAGACCGGCATTATGGGAGTC..................................................................................................................................21119.00191402012
....................................................................................................................................................CAAGACCGGCATTATGGGAG....................................................................................................................................20119.0019704305
..............................................................................................................ACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................22117.00171600100
.............................................................................................................AACCCGTAAATCCGAACTTGTGCC.......................................................................................................................................................................24113.00131200100
...................................................................................................................................................ACAAGACCGGCATTATGGGAGT...................................................................................................................................22111.0011102503
..............................................................................................................ACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................22110.0010600202
....................................................................................................................................................CAAGACCGGCATTATGGGA.....................................................................................................................................19110.0010401104
.............................................................................................................AACCCGTAAATCCGAACTTGTGAA.......................................................................................................................................................................24110.0010701200
.............................................................................................................AACCCGTAAATCCGAACTT............................................................................................................................................................................1919.009800001
.............................................................................................................AACCCGTAAATCCGAACTTGC..........................................................................................................................................................................2119.009000621
.............................................................................................................AACCCGTAAATCCGAACTTGTGG........................................................................................................................................................................2318.008701000
.............................................................................................................AACCCGTAAATCCGAACTTGTGTCA......................................................................................................................................................................2515.005101003
.............................................................................................................AACCCGTAAATCCGAACT.............................................................................................................................................................................1815.005500000
.............................................................................................................AACCCGTAAATCCGAACTTGTGTCT......................................................................................................................................................................2515.005100004
.............................................................................................................AACCCGTAAATCCGAACTTGTA.........................................................................................................................................................................2214.004100111
.............................................................................................................AACCCGTAAATCCGAACTTGTGCA.......................................................................................................................................................................2414.004300100
...............................................................................................................CCCGTAAATCCGAACTTGT..........................................................................................................................................................................1914.004400000
...............................................................................................................CCCGTAAATCCGAACTTGTGC........................................................................................................................................................................2114.004400000
.............................................................................................................AACCCGTAAATCCGAACTTGTGTCC......................................................................................................................................................................2514.004100102
.............................................................................................................AACCCGTAAATCCGAACTTGG..........................................................................................................................................................................2114.004002200
....................................................................................................................................................CAAGACCGGCATTATGGGAGTCA.................................................................................................................................2313.003200001
..............................................................................................................ACCCGTAAATCCGAACTTGTC.........................................................................................................................................................................2113.003300000
............................................................................................................AAACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................2413.003200100
................................................................................................................CCGTAAATCCGAACTTGT..........................................................................................................................................................................1813.003300000
.............................................................................................................AACCCGTAAATCCGAACTTGTGTA.......................................................................................................................................................................2413.003000300
....................................................................................................................................................CAAGACCGGCATTATGGG......................................................................................................................................1813.003100101
.............................................................................................................AACCCGTAAATCCGAACTTGTTT........................................................................................................................................................................2313.003101100
.....................................................................................................................................................AAGACCGGCATTATGGGAGT...................................................................................................................................2013.003300000
..............................................................................................................ACCCGTAAATCCGAACTTGTGTC.......................................................................................................................................................................2312.002100001
.............................................................................................................AACCCGTAAATCCGAACTTGTGCTGT.....................................................................................................................................................................2612.002200000
.............................................................................................................AACCCGTAAATCCGAACTTTG..........................................................................................................................................................................2112.002200000
.............................................................................................................AACCCGTAAATCCGAACTTGTGCCT......................................................................................................................................................................2512.002200000
.............................................................................................................AACCCGTAAATCCGAACTTGAC.........................................................................................................................................................................2212.002000110
.............................................................................................................AACCCGTAAATCCGAACTTGTGCCC......................................................................................................................................................................2512.002200000
.............................................................................................................AACCCGTAAATCCGAACTTGTTG........................................................................................................................................................................2312.002100100
............................................................................................................AAACCCGTAAATCCGAACTTG...........................................................................................................................................................................2112.002200000
.............................................................................................................AACCCGTAAATCCGAACTTGA..........................................................................................................................................................................2112.002100100
....................................................................................................................................................CAAGACCGGCATTATGGGT.....................................................................................................................................1912.002101000
.......................................................................................................................................................GACCGGCATTATGGGAGTC..................................................................................................................................1912.002200000
...........................................................................................................GAAACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................2411.001100000
..........................................................................................................................................................................TGTCAATGCAAACAACTTGGTTTTTGGC-.....................................................................................................2811.001100000
............................................................................................................AAACCCGTAAATCCGAACTTGTT.........................................................................................................................................................................2311.001000100
.............................................................................................................AACCCGTAAATCCGAACTTGTTTC.......................................................................................................................................................................2411.001000001
.............................................................................................................AACCCGTAAATCCGAACTTGTGCCCC.....................................................................................................................................................................2611.001100000
..............................................................................................................ACCCGTAAATCCGAACTTGTT.........................................................................................................................................................................2111.001100000
.....................................................................................................................................................AAGACCGGCATTATGGGAGTCT.................................................................................................................................2211.001001000
......................................................................................................................................................AGACCGGCATTATGGGAGTC..................................................................................................................................2011.001100000
droGri2
---------GCCAATATCAAATT---AT------AATCAAATAATGA--------------------------GAAATGGTGCATACTTACATATGGACCATTAACAGAAACCCGTAAATCCGAACTTGTGCTGTTTTTTATCTGTTACAAGACCGGCATTATGGGAGTCTGTCAATGCAAACAACT-GGTTTTTGGC-AACAAAA----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.............................................................................................................AACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................221828.008288217
.............................................................................................................AACCCGTAAATCCGAACTTGT..........................................................................................................................................................................211226.0022616066
..............................................................................................................ACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................21180.0080800
.............................................................................................................AACCCGTAAATCCGAACTTGTGT........................................................................................................................................................................23136.00361026
....................................................................................................................................................CAAGACCGGCATTATGGGAGTC..................................................................................................................................22124.00241014
..............................................................................................................ACCCGTAAATCCGAACTTGT..........................................................................................................................................................................20119.0019172
.............................................................................................................AACCCGTAAATCCGAACTTG...........................................................................................................................................................................20119.0019190
.............................................................................................................AACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................23115.0015141
....................................................................................................................................................CAAGACCGGCATTATGGGAGT...................................................................................................................................21114.0014212
............................................................................................................AAACCCGTAAATCCGAACTTGT..........................................................................................................................................................................2215.00532
..............................................................................................................ACCCGTAAATCCGAACTTG...........................................................................................................................................................................1915.00550
..............................................................................................................ACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................2213.00330
................................................................................................................CCGTAAATCCGAACTTGTG.........................................................................................................................................................................1913.00330
............................................................................................................AAACCCGTAAATCCGAACTTGTG.........................................................................................................................................................................2313.00330
.............................................................................................................AACCCGTAAATCCGAACTTGTGAA.......................................................................................................................................................................2413.00330
...............................................................................................................CCCGTAAATCCGAACTTGTG.........................................................................................................................................................................2013.00330
.............................................................................................................AACCCGTAAATCCGAACTT............................................................................................................................................................................1912.00220
.............................................................................................................AACCCGTAAATCCGAACTTGTGC........................................................................................................................................................................2312.00211
.....................................................................................................................................................AAGACCGGCATTATGGGAGTC..................................................................................................................................2112.00220
...................................................................................................................................................ACAAGACCGGCATTATGGGAGT...................................................................................................................................2212.00211
.............................................................................................................AACCCGTAAATCCGAACTTGTGAC.......................................................................................................................................................................2411.00110
.............................................................................................................AACCCGTAAATCCGAACTTGTC.........................................................................................................................................................................2211.00110
.............................................................................................................AACCCGTAAATCCGAACTTGC..........................................................................................................................................................................2111.00110
.............................................................................................................AACCCGTAAATCCGAACTTGTT.........................................................................................................................................................................2211.00110
.................................................................................................................................................................ATGGGAGTCTGTCAATGC.........................................................................................................................1811.00101
..............................................................................................................ACCCGTAAATCCGAACTTGTGA........................................................................................................................................................................2211.00110
.................................................................................................................................................................ATGGGAGTCTGTCAATGCAAACA....................................................................................................................2311.00101
....................................................................................................................................................CAAGACCGGCATTATGGGA.....................................................................................................................................1911.00110
.............................................................................................................AACCCGTAAATCCGAACTTGTGTG.......................................................................................................................................................................2411.00110
...............................................................................................................CCCGTAAATCCGAACTTG...........................................................................................................................................................................1811.00110
................................................................................................................CCGTAAATCCGAACTTGT..........................................................................................................................................................................1811.00110
...............................................................................................................CCCGTAAATCCGAACTTGTGC........................................................................................................................................................................2111.00110
...............................................................................................................CCCGTAAATCCGAACTTGT..........................................................................................................................................................................1911.00110
....................................................................................................................................................CAAGACCGGCATTATGGGATAA..................................................................................................................................2211.00101

Generated: 10/20/2015 at 11:45 PM