ID:

dan-mir-10

 Coordinate:

scaffold_13340:5417368-5417444 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-33.7 -33.4 -33.1

Flybase annnotation

pre_miRNA [Dana\mir-10-RM]; utr3 [utr3_minus_6887]; CDS [Dana\GF17791-cds]; miRNA [Dana\miR-10-RA]

No Repeatable elements found

Sense Strand Reads

CCTCACCCAACACCGTCACACCTTGCGGCTGTGCTCCTATCCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATTTCCATCGTAAAATAAAAGTGTTTAATGAAGTGATTGGATAAAT

*******************************************..(((..(((((...(((((.((((.(((((((((((((............))))))))))))).)))).)).)))...)))))..)))....***************************************** 		Read size # Mismatch Hit Count Total Norm Total M044

female body

 M058

embryo

 V105

male body		 V106

head

 V055

head

 V039

embryo
..........................................................ACCCTGTAGATCCGAATTTGTT................................................................................................. 22 0 1 107386.00 107386 30654 25704 19236 26555 2718 2519
..................................................................................................CAAATTCGGTTCTAGAGAGGTTT........................................................ 23 0 1 72010.00 72010 37540 11911 16536 3490 2054 479
..........................................................ACCCTGTAGATCCGAATTTGT.................................................................................................. 21 0 1 10625.00 10625 4054 1411 1991 2640 436 93
..................................................................................................CAAATTCGGTTCTAGAGAGGTT......................................................... 22 0 1 10012.00 10012 3827 868 3524 1231 523 39
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTT....................................................... 24 1 1 4130.00 4130 1220 161 1417 1143 181 8
..........................................................ACCCTGTAGATCCGAATTTGTTT................................................................................................ 23 0 1 3914.00 3914 1462 256 783 1278 101 34
...................................................................................................AAATTCGGTTCTAGAGAGGTTT........................................................ 22 0 1 3125.00 3125 2940 43 104 21 14 3
..................................................................................................CAAATTCGGTTCTAGAGAGGT.......................................................... 21 0 1 3098.00 3098 802 90 1757 214 228 7
..........................................................ACCCTGTAGATCCGAATTTGTC................................................................................................. 22 1 1 2941.00 2941 51 2837 18 29 4 2
...........................................................CCCTGTAGATCCGAATTTGTT................................................................................................. 21 0 1 2785.00 2785 2761 11 7 6 0 0
..................................................................................................CAAATTCGGTTCTAGAGAGG........................................................... 20 0 1 1659.00 1659 485 22 963 107 80 2
..........................................................ACCCTGTAGATCCGAATTTG................................................................................................... 20 0 1 1543.00 1543 1139 20 225 102 53 4
..........................................................ACACTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 1363.00 1363 7 1231 25 68 25 7
..........................................................AGCCTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 1218.00 1218 1 1178 33 2 3 1
..........................................................ACCTTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 824.00 824 3 797 8 9 3 4
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTTT...................................................... 25 1 1 689.00 689 60 2 113 479 33 2
..................................................................................................CGAATTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 665.00 665 5 623 30 5 2 0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTC........................................................ 23 1 1 656.00 656 7 622 22 1 3 1
..................................................................................................CAAATTCGATTCTAGAGAGGTTT........................................................ 23 1 1 563.00 563 540 2 16 3 2 0
..........................................................ACCCTGTAAATCCGAATTTGTT................................................................................................. 22 1 1 538.00 538 502 10 9 9 2 6
..........................................................ACCCTGTATATCCGAATTTGTT................................................................................................. 22 1 1 457.00 457 253 6 47 131 3 17
..................................................................................................CAATTTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 404.00 404 2 391 8 2 1 0
..........................................................ACCCTGTAGATCCGAATTTGAT................................................................................................. 22 1 1 371.00 371 1 1 224 142 3 0
..................................................................................................CAAATTCGGTTCTAGAGAG............................................................ 19 0 1 368.00 368 103 10 195 32 23 5
...........................................................CCCTGTAGATCCGAATTTGT.................................................................................................. 20 0 1 367.00 367 364 1 1 1 0 0
..................................................................................................CAAATTCGTTTCTAGAGAGGTTT........................................................ 23 1 1 357.00 357 321 5 19 9 1 2
..........................................................ACCCTGTAGATCCGAATTTGC.................................................................................................. 21 1 1 346.00 346 4 321 15 3 3 0
...................................................................................................AAATTCGGTTCTAGAGAGGTT......................................................... 21 0 1 344.00 344 317 2 18 5 1 1
..........................................................ACCCTGTAGATCAGAATTTGTT................................................................................................. 22 1 1 304.00 304 5 63 125 99 11 1
..........................................................ACCCTGTAGATCCGAATTTGCT................................................................................................. 22 1 1 294.00 294 12 11 145 115 7 4
..................................................................................................CAAATTCGCTTCTAGAGAGGTTT........................................................ 23 1 1 286.00 286 260 6 17 2 1 0
..........................................................ACCCTGTACATCCGAATTTGTT................................................................................................. 22 1 1 278.00 278 201 31 22 6 3 15
..........................................................ACCCTGTAGATACGAATTTGTT................................................................................................. 22 1 1 268.00 268 2 42 133 84 4 3
..........................................................ATCCTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 267.00 267 4 192 26 37 4 4
..................................................................................................CAAATTCGGTTCTAGAGAGGATT........................................................ 23 1 1 265.00 265 10 4 221 23 3 4
..........................................................ACCCTGTAGATCCGAATTTTTT................................................................................................. 22 1 1 228.00 228 61 66 19 36 3 43
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTTTT..................................................... 26 2 1 226.00 226 7 0 32 177 10 0
..................................................................................................CAAATTCGGTTCTAGAGAGGCTT........................................................ 23 1 1 224.00 224 31 6 138 24 22 3
..........................................................GCCCTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 217.00 217 112 29 28 40 3 5
..........................................................ACCATGTAGATCCGAATTTGTT................................................................................................. 22 1 1 217.00 217 1 1 70 131 13 1
..........................................................ACTCTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 211.00 211 3 165 15 22 5 1
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTA....................................................... 24 1 1 207.00 207 133 14 47 8 4 1
..........................................................ACCCTGTAGATCCGAATTTGTTA................................................................................................ 23 1 1 205.00 205 85 63 29 26 1 1
....................................................................................................AATTCGGTTCTAGAGAGGTTT........................................................ 21 0 1 203.00 203 172 26 4 0 1 0
..........................................................ACCCTGTAGATCCTAATTTGTT................................................................................................. 22 1 1 197.00 197 12 15 50 104 0 16
............................................................CCTGTAGATCCGAATTTGTT................................................................................................. 20 0 1 191.00 191 167 8 9 6 0 1
..........................................................ACGCTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 171.00 171 1 79 2 82 5 2
..................................................................................................CAAATTCGGTTCTAGAGAGGGTT........................................................ 23 1 1 168.00 168 13 85 57 1 9 3
..................................................................................................CAAATTCGGTTCTAGATAGGTTT........................................................ 23 1 1 161.00 161 25 21 69 37 5 4
...........................................................CCCTGTAGATCCGAATTTGTTT................................................................................................ 22 0 1 159.00 159 140 2 5 12 0 0
..........................................................ACCCTGTCGATCCGAATTTGTT................................................................................................. 22 1 1 154.00 154 1 134 6 3 6 4
..........................................................ACCCTGTAGATCCGAATTTGGT................................................................................................. 22 1 1 152.00 152 0 62 60 20 4 6
..........................................................ACCCTGTAGATCCGCATTTGTT................................................................................................. 22 1 1 148.00 148 0 65 9 8 24 42
..........................................................ACCCTTTAGATCCGAATTTGTT................................................................................................. 22 1 1 144.00 144 6 96 15 22 1 4
..................................................................................................GAAATTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 142.00 142 108 4 21 2 7 0
..................................................................................................CAAATTCGGTTATAGAGAGGTTT........................................................ 23 1 1 140.00 140 1 13 118 6 2 0
..........................................................ACACTGTAGATCCGAATTTGTC................................................................................................. 22 2 1 140.00 140 0 140 0 0 0 0
..................................................................................................CAAATTCGGCTCTAGAGAGGTTT........................................................ 23 1 1 138.00 138 33 23 30 13 31 8
..........................................................TCCCTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 136.00 136 14 115 2 3 2 0
..................................................................................................CTAATTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 134.00 134 4 104 22 1 3 0
...................................................................................................AAATTCGGTTCTAGAGAGGTTTT....................................................... 23 1 1 132.00 132 112 1 13 5 1 0
..................................................................................................CAAATTCGGTTCTGGAGAGGTTT........................................................ 23 1 1 129.00 129 49 3 55 10 11 1
..........................................................ACCCTGTAGATCCGACTTTGTT................................................................................................. 22 1 1 128.00 128 1 2 51 30 29 15
..........................................................ACCCTGTAGATCTGAATTTGTT................................................................................................. 22 1 1 123.00 123 7 9 55 35 10 7
..........................................................AGCCTGTAGATCCGAATTTGTC................................................................................................. 22 2 1 116.00 116 0 116 0 0 0 0
..........................................................ACCCTGTAGATCCAAATTTGTT................................................................................................. 22 1 1 115.00 115 32 9 33 37 2 2
..........................................................ACCCTGTAGATCCGAATTT.................................................................................................... 19 0 1 115.00 115 56 11 2 34 3 9
...........................................................CCCTGTAGGTCCGAATTTGTT................................................................................................. 21 1 1 114.00 114 114 0 0 0 0 0
..........................................................ACCCTGTAGATCCGAATTTGTG................................................................................................. 22 1 1 114.00 114 105 3 1 3 2 0
..........................................................ACCCTGGAGATCCGAATTTGTT................................................................................................. 22 1 1 112.00 112 2 40 12 7 31 20
..........................................................ACCCTGTAGATCCGATTTTGTT................................................................................................. 22 1 1 109.00 109 2 68 23 11 4 1
..................................................................................................CAAATTCGGTTCTAGAGAGGTGT........................................................ 23 1 1 109.00 109 109 0 0 0 0 0
..................................................................................................CAAATTCGGTTCTATAGAGGTTT........................................................ 23 1 1 106.00 106 8 2 71 19 4 2
..........................................................ACCCTGTAGATTCGAATTTGTT................................................................................................. 22 1 1 105.00 105 6 24 52 20 1 2
...........................................................CCCTGTAGATCCGAATTTG................................................................................................... 19 0 1 105.00 105 104 0 0 1 0 0
..................................................................................................CAAATTCTGTTCTAGAGAGGTTT........................................................ 23 1 1 101.00 101 35 8 45 11 1 1
...................................................................................................AAATTCGGGTCTAGAGAGGTTT........................................................ 22 1 1 100.00 100 100 0 0 0 0 0
..................................................................................................AAAATTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 100.00 100 28 4 32 14 22 0
..........................................................ACCCTGCAGATCCGAATTTGTT................................................................................................. 22 1 1 98.00 98 10 12 29 19 18 10
..................................................................................................TAAATTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 98.00 98 9 49 20 4 16 0
..........................................................ACCCCGTAGATCCGAATTTGTT................................................................................................. 22 1 1 96.00 96 15 24 22 28 2 5
..................................................................................................CAAATTCGGTTCTAGAGATGTTT........................................................ 23 1 1 94.00 94 17 19 32 14 5 7
..........................................................AACCTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 93.00 93 7 3 49 13 15 6
..........................................................ACCCTGTAGACCCGAATTTGTT................................................................................................. 22 1 1 88.00 88 11 10 33 24 7 3
..........................................................ACCCTGTAGATGCGAATTTGTT................................................................................................. 22 1 1 86.00 86 0 6 72 7 1 0
..........................................................ACACTGTAGATCCGAATTTGT.................................................................................................. 21 1 1 85.00 85 0 73 2 6 4 0
..................................................................................................CAAATTCGGTTCTAGAGAGTTTT........................................................ 23 1 1 84.00 84 41 5 14 15 5 4
..........................................................ACCCTGTAAATCCGAATTTGT.................................................................................................. 21 1 1 83.00 83 80 1 2 0 0 0
..........................................................ACCTTGTAGATCCGAATTTGTC................................................................................................. 22 2 1 82.00 82 0 82 0 0 0 0
..................................................................................................CAAATTCGGTTCTAGAGAGGTC......................................................... 22 1 1 81.00 81 7 67 5 1 1 0
..........................................................ACCCTGTGGATCCGAATTTGTT................................................................................................. 22 1 1 79.00 79 10 19 13 26 8 3
..................................................................................................CAAATTCGGTTCTAGAGAGGTTG........................................................ 23 1 1 76.00 76 23 14 22 11 5 1
..........................................................ACCCTGTAGATCCGAGTTTGTT................................................................................................. 22 1 1 74.00 74 0 3 39 21 10 1
..........................................................ACCCTGTAGATCCGAATTTGTTTT............................................................................................... 24 0 1 72.00 72 21 2 13 32 4 0
..................................................................................................CAACTTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 71.00 71 1 0 62 7 1 0
..........................................................AGCCTGTAGATCCGAATTTGT.................................................................................................. 21 1 1 69.00 69 0 65 3 1 0 0
..........................................................ACCCTGTAGATCCGAATTTGTA................................................................................................. 22 1 1 67.00 67 35 21 7 4 0 0
..................................................................................................CAAATTCGATTCTAGAGAGGTT......................................................... 22 1 1 64.00 64 57 0 4 2 0 1
..................................................................................................CAAATTCGGGTCTAGAGAGGTTT........................................................ 23 1 1 62.00 62 9 18 15 1 16 3
.........................................................CACCCTGTAGATCCGAATTTGTT................................................................................................. 23 1 1 62.00 62 18 38 1 3 1 1
..................................................................................................CAAATTCGGTTCCAGAGAGGTTT........................................................ 23 1 1 62.00 62 13 4 41 2 2 0
..................................................................................................CAAATTCGGTTCTAGAGAGGAT......................................................... 22 1 1 62.00 62 2 1 50 7 2 0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTG....................................................... 24 0 1 62.00 62 49 1 8 2 2 0
..................................................................................................CAAATTCGGTTGTAGAGAGGTTT........................................................ 23 1 1 61.00 61 0 3 58 0 0 0
..................................................................................................CAAATTAGGTTCTAGAGAGGTTT........................................................ 23 1 1 61.00 61 3 1 36 13 8 0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTA........................................................ 23 1 1 60.00 60 29 2 20 2 7 0
..................................................................................................CAAATTCGGTTCTAGAGGGGTTT........................................................ 23 1 1 60.00 60 33 7 15 2 2 1
..................................................................................................CAAATTCGGTCCTAGAGAGGTTT........................................................ 23 1 1 60.00 60 19 3 32 3 2 1
..........................................................ACCCTGTAGATCCGAATTTGA.................................................................................................. 21 1 1 58.00 58 2 0 36 19 1 0
..................................................................................................CAAATTCGGTACTAGAGAGGTTT........................................................ 23 1 1 56.00 56 3 3 48 0 2 0
..................................................................................................CAAATTCGGTTCTAGGGAGGTTT........................................................ 23 1 1 55.00 55 20 9 10 9 6 1
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTAT...................................................... 25 1 1 55.00 55 6 0 11 36 2 0
..................................................................................................CAAATTCGGTTCTAGTGAGGTTT........................................................ 23 1 1 55.00 55 3 19 24 2 7 0
..................................................................................................CAAATTCGGTTCTAGAGAGGTAT........................................................ 23 1 1 54.00 54 50 3 0 0 1 0
..................................................................................................CAAATTCGGTTCAAGAGAGGTTT........................................................ 23 1 1 54.00 54 2 1 51 0 0 0
..................................................................................................CAAATTCGGTTCTAGAGA............................................................. 18 0 1 53.00 53 20 11 4 7 3 8
..................................................................................................CAAATTCGGTTCTAGAGAGGTCT........................................................ 23 1 1 53.00 53 36 4 8 2 3 0
..................................................................................................CAGATTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 53.00 53 13 5 12 20 3 0
...................................................................................................AAATTCGGTTCTAGAGAGGT.......................................................... 20 0 1 52.00 52 46 0 5 0 1 0
..........................................................ACCCTGTAGATCCCAATTTGTT................................................................................................. 22 1 1 52.00 52 4 3 18 14 1 12
..........................................................ACCCTGTAGATCCGAATTTGTTC................................................................................................ 23 1 1 51.00 51 15 33 2 1 0 0
..........................................................ACCCTGTAGGTCCGAATTTGTT................................................................................................. 22 1 1 51.00 51 7 4 10 21 6 3
..........................................................ACCCTGTAGAGCCGAATTTGTT................................................................................................. 22 1 1 51.00 51 0 0 34 1 10 6
..........................................................ACCCTGTATATCCGAATTTGT.................................................................................................. 21 1 1 50.00 50 35 0 4 10 0 1
..................................................................................................CAAATTCGGTTCGAGAGAGGTTT........................................................ 23 1 1 50.00 50 8 0 38 0 4 0
..........................................................ACCTTGTAGATCCGAATTTGT.................................................................................................. 21 1 1 50.00 50 2 45 0 2 1 0
..................................................................................................CGAATTCGGTTCTAGAGAGGTT......................................................... 22 1 1 49.00 49 0 43 6 0 0 0
..........................................................ACCCTGTAGATCCGAATTCGTT................................................................................................. 22 1 1 48.00 48 3 9 8 18 8 2
..........................................................ACCCTGTAGATCCGAATTTGTTAA............................................................................................... 24 2 1 47.00 47 31 4 8 3 0 1
..................................................................................................CACATTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 47.00 47 0 34 11 1 1 0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTTTTT.................................................... 27 2 1 47.00 47 1 1 5 38 2 0
..................................................................................................CAAATTCGGTTCTGGAGAGGTT......................................................... 22 1 1 46.00 46 8 0 22 11 5 0
..................................................................................................CAAATGCGGTTCTAGAGAGGTTT........................................................ 23 1 1 46.00 46 1 28 2 0 15 0
..................................................................................................CAAATTCGGTTCTAGAGAGTTT......................................................... 22 1 1 45.00 45 22 6 11 5 1 0
..........................................................ACCCTGTAGATCCGAATCTGTT................................................................................................. 22 1 1 44.00 44 3 7 11 13 5 5
..........................................................ACCCTGTAGAACCGAATTTGTT................................................................................................. 22 1 1 43.00 43 1 9 30 1 0 2
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTC....................................................... 24 1 1 42.00 42 19 8 11 3 1 0
..........................................................ACCCTGTACATCCGAATTTGT.................................................................................................. 21 1 1 42.00 42 38 2 0 0 1 1
.........................................................TACCCTGTAGATCCGAATTTGT.................................................................................................. 22 0 1 42.00 42 13 16 5 5 0 3
.........................................................TACCCTGTAGATCCGAATTTGTT................................................................................................. 23 0 1 42.00 42 32 1 4 4 1 0
..................................................................................................CAAATTCGGTTTTAGAGAGGTTT........................................................ 23 1 1 41.00 41 1 7 32 1 0 0
.................................................................................................CCAAATTCGGTTCTAGAGAGGTTT........................................................ 24 1 1 41.00 41 31 10 0 0 0 0
..........................................................ACCCTATAGATCCGAATTTGTT................................................................................................. 22 1 1 41.00 41 2 11 6 18 1 3
..........................................................ACCCTGTAGTTCCGAATTTGTT................................................................................................. 22 1 1 40.00 40 3 23 2 4 6 2
..........................................................ACCCTGTAGATCCGGATTTGTT................................................................................................. 22 1 1 40.00 40 3 10 7 8 7 5
..........................................................ACCCTGTAGATCCGAATTTGTTG................................................................................................ 23 1 1 40.00 40 33 2 0 3 1 1
...................................................................................................AAATTCGGATCTAGAGAGGTTT........................................................ 22 1 1 40.00 40 40 0 0 0 0 0
...................................................................................................AAATTCGGTTCTAGAGAGG........................................................... 19 0 1 39.00 39 35 0 4 0 0 0
.......................................................................................................TCGGTTCTAGAGAGGTTT........................................................ 18 0 1 39.00 39 36 3 0 0 0 0
.....................................................................................................ATTCGGTTCTAGAGAGGTTT........................................................ 20 0 1 39.00 39 30 8 1 0 0 0
..................................................................................................CAAATTCGGTTCTAGAGAGGA.......................................................... 21 1 1 39.00 39 2 0 33 4 0 0
..................................................................................................CAAATTCGGTTCTGGAGAGGT.......................................................... 21 1 1 39.00 39 5 0 26 2 6 0
.................................................................................................ACAAATTCGGTTCTAGAGAGGTTT........................................................ 24 0 1 38.00 38 24 9 5 0 0 0
..........................................................ACCCTGTAGATCCGAATT..................................................................................................... 18 0 1 38.00 38 26 10 0 2 0 0
..........................................................ACCCTGTAGATCCGAACTTGTT................................................................................................. 22 1 1 38.00 38 6 2 11 13 4 2
..................................................................................................CAATTTCGGTTCTAGAGAGGTT......................................................... 22 1 1 38.00 38 0 37 1 0 0 0
..................................................................................................CAAATTCGGTTCTAGCGAGGTTT........................................................ 23 1 1 38.00 38 3 0 31 0 4 0
...................................................................................................CAATTCGGTTCTAGAGAGGTTT........................................................ 22 1 1 38.00 38 21 1 13 2 1 0
..........................................................ACCCTGTAGCTCCGAATTTGTT................................................................................................. 22 1 1 37.00 37 0 1 8 6 12 10
..........................................................ACCCTGTAGATCGGAATTTGTT................................................................................................. 22 1 1 36.00 36 10 2 18 5 1 0
..................................................................................................CAAATTCGGTTCTAGAGAGGCT......................................................... 22 1 1 36.00 36 3 0 22 6 4 1
..................................................................................................CAAATTCGTTTCTAGAGAGGTT......................................................... 22 1 1 36.00 36 27 0 8 0 1 0
..................................................................................................CAAATTCAGTTCTAGAGAGGTTT........................................................ 23 1 1 36.00 36 7 7 15 4 3 0
..................................................................................................CAAATTCGGTTCTCGAGAGGTTT........................................................ 23 1 1 34.00 34 0 0 26 0 5 3
..................................................................................................CAAATTCGGATCTAGAGAGGTTT........................................................ 23 1 1 34.00 34 5 10 6 0 13 0
..........................................................ACCCTGTAGATCCGAAATTGTT................................................................................................. 22 1 1 34.00 34 4 5 5 17 1 2
..................................................................................................CAAATTCGGTTCTAGATAGGTT......................................................... 22 1 1 33.00 33 5 1 16 10 1 0
.............................................................CTGTAGATCCGAATTTGTT................................................................................................. 19 0 1 33.00 33 24 3 4 1 0 1
..................................................................................................CAAATTCGGTTCTAGAGAGGC.......................................................... 21 1 1 33.00 33 1 19 10 0 3 0
..................................................................................................CAAGTTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 33.00 33 6 6 15 2 3 1
..........................................................ACCCTGTAGATCCGAATTTCTT................................................................................................. 22 1 1 33.00 33 5 0 5 8 6 9
...................................................................................................AAATTCGGCTCTAGAGAGGTTT........................................................ 22 1 1 32.00 32 30 1 0 1 0 0
.................................................................................................TCAAATTCGGTTCTAGAGAGGTTT........................................................ 24 1 1 32.00 32 31 1 0 0 0 0
.................................................................................................GCAAATTCGGTTCTAGAGAGGTTT........................................................ 24 1 1 32.00 32 32 0 0 0 0 0
..................................................................................................CCAATTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 32.00 32 2 0 28 2 0 0
..........................................................ACCCTGTAGATCCGAATTTTT.................................................................................................. 21 1 1 32.00 32 12 7 2 11 0 0
..................................................................................................CAAATTCGGTTCTAGAGAGGTA......................................................... 22 1 1 31.00 31 16 1 10 3 1 0
..................................................................................................CAAATTTGGTTCTAGAGAGGTTT........................................................ 23 1 1 31.00 31 4 9 12 4 2 0
..........................................................ACCCTGTAGATCCGAATTTATT................................................................................................. 22 1 1 31.00 31 6 3 7 11 2 2
..................................................................................................CAAATTCGGTTCTAGAGAGGGT......................................................... 22 1 1 31.00 31 3 6 20 1 0 1
..........................................................ACCCTGTAGATACGAATTTGT.................................................................................................. 21 1 1 31.00 31 0 2 20 7 2 0
..........................................................ACCCTGTAGATCCGTATTTGTT................................................................................................. 22 1 1 30.00 30 0 2 4 2 15 7
..................................................................................................CAAATTCTGTTCTAGAGAGGTT......................................................... 22 1 1 29.00 29 8 1 12 8 0 0
..................................................................................................CAAACTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 29.00 29 8 7 10 2 2 0
..................................................................................................CAAATTCGGTGCTAGAGAGGTTT........................................................ 23 1 1 28.00 28 0 0 22 0 6 0
..................................................................................................CAAATTCGGTTCTGGAGAGG........................................................... 20 1 1 28.00 28 4 0 17 5 2 0
..................................................................................................CAAATTCGCTTCTAGAGAGGTT......................................................... 22 1 1 27.00 27 25 0 0 1 0 1
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTCT...................................................... 25 1 1 27.00 27 0 0 2 23 1 1
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA...................................................... 25 2 1 27.00 27 20 0 4 2 1 0
..........................................................ACCCTGAAGATCCGAATTTGTT................................................................................................. 22 1 1 26.00 26 3 2 11 0 8 2
...........................................................CCCTGTAGCTCCGAATTTGTT................................................................................................. 21 1 1 25.00 25 25 0 0 0 0 0
...........................................................CCCTGTAGTTCCGAATTTGTT................................................................................................. 21 1 1 25.00 25 25 0 0 0 0 0
............................................................CCTGTAGATCCGAATTTGT.................................................................................................. 19 0 1 25.00 25 23 1 0 1 0 0
..................................................................................................CAAATTCGGTTCTATAGAGGTT......................................................... 22 1 1 25.00 25 2 0 10 12 1 0
..................................................................................................CAAATCCGGTTCTAGAGAGGTTT........................................................ 23 1 1 25.00 25 2 3 7 5 8 0
..........................................................ACCCTCTAGATCCGAATTTGTT................................................................................................. 22 1 1 24.00 24 0 1 7 8 4 4
..................................................................................................CAAATTCGGTTCTACAGAGGTTT........................................................ 23 1 1 24.00 24 9 1 7 0 5 2
..........................................................ACCCGGTAGATCCGAATTTGTT................................................................................................. 22 1 1 24.00 24 0 9 1 3 6 5
..........................................................ACCCTGTAGATCAGAATTTGT.................................................................................................. 21 1 1 24.00 24 1 4 15 4 0 0
..................................................................................................CAAATTCGGTTATAGAGAGGTT......................................................... 22 1 1 24.00 24 0 0 19 5 0 0
..................................................................................................CAAATTCGGTTCTAGAGACGTTT........................................................ 23 1 1 24.00 24 5 1 11 1 4 2
..................................................................................................CAAATTCGGTTCTAGAGAAGTTT........................................................ 23 1 1 24.00 24 8 1 11 2 1 1
......................................................................................................TTCGGTTCTAGAGAGGTTT........................................................ 19 0 1 24.00 24 20 3 1 0 0 0
..................................................................................................CAAATTCGGTTCTAGACAGGTTT........................................................ 23 1 1 24.00 24 12 0 9 1 2 0
..................................................................................................CGAATTCGGTTCTAGAGAGGTTC........................................................ 23 2 1 24.00 24 0 24 0 0 0 0
..........................................................ACCCTGTATATCCGAATTTGTTT................................................................................................ 23 1 1 24.00 24 14 0 5 4 0 1
..................................................................................................CAGATTCGGTTCTGGAGAGGTTT........................................................ 23 2 1 23.00 23 8 0 12 3 0 0
..........................................................ACCCTGTAAATCCGAATTTGTTT................................................................................................ 23 1 1 23.00 23 21 0 1 1 0 0
..................................................................................................CAAATTCGGTTCTAGAGAGGCTTT....................................................... 24 2 1 23.00 23 1 0 10 9 3 0
..............................................................TGTAGATCCGAATTTGTT................................................................................................. 18 0 1 23.00 23 6 0 9 7 1 0
..................................................................................................CAATTTCGGTTCTAGAGAGGTTC........................................................ 23 2 1 23.00 23 0 23 0 0 0 0
..........................................................GCCCTGTAGATCCGAATTTGT.................................................................................................. 21 1 1 23.00 23 16 2 2 2 1 0
..........................................................ACTCTGTAGATCCGAATTTGTC................................................................................................. 22 2 1 22.00 22 0 22 0 0 0 0
..................................................................................................CAAATTCGGTTCTAGAGCGGTTT........................................................ 23 1 1 22.00 22 2 1 11 0 6 2
..........................................................AGCTTGTAGATCCGAATTTGTT................................................................................................. 22 2 1 22.00 22 0 22 0 0 0 0
..........................................................ACCATGTAGATCCGAATTTGT.................................................................................................. 21 1 1 22.00 22 0 0 9 10 3 0
..........................................................ATCCTGTAGATCCGAATTTGT.................................................................................................. 21 1 1 22.00 22 0 16 5 1 0 0
..........................................................ACCCAGTAGATCCGAATTTGTT................................................................................................. 22 1 1 22.00 22 2 6 4 5 3 2
..................................................................................................CAAATTCGGTTCTAGAGGTTT.......................................................... 21 3 3 21.33 64 45 3 14 2 0 0
..........................................................ACCCTGTAGATCCGAATTGTT.................................................................................................. 21 2 1 21.00 21 3 2 3 13 0 0
..........................................................ACCCTGTAGATCCGAATGTGTT................................................................................................. 22 1 1 21.00 21 2 10 2 0 5 2
..................................................................................................AAAATTCGGTTCTAGAGAGGTT......................................................... 22 1 1 21.00 21 7 0 6 2 6 0
..................................................................................................CAAATTCGGTTCTAGAGTGGTTT........................................................ 23 1 1 21.00 21 4 9 5 1 2 0
..................................................................................................CAAATTAGGTTCTAGAGAGGTT......................................................... 22 1 1 21.00 21 0 0 14 5 2 0
..................................................................................................TAAATTCGGTTCTAGAGAGGTT......................................................... 22 1 1 21.00 21 3 4 4 4 6 0
..................................................................................................CAAATTCGGTTCTAGATAGGT.......................................................... 21 1 1 21.00 21 2 0 14 4 0 1
..........................................................ACCCTGTAGATCCGAATTTT................................................................................................... 20 1 1 20.00 20 4 3 4 7 1 1
..................................................................................................CAAATTCGGTTCTTGAGAGGTTT........................................................ 23 1 1 20.00 20 3 3 11 0 3 0
..........................................................ACCCTGTAGATCCGATTTGTT.................................................................................................. 21 3 2 20.00 40 7 3 6 24 0 0
..........................................................ACCCTGTAGATCCTAATTTGT.................................................................................................. 21 1 1 20.00 20 0 0 9 11 0 0
..................................................................................................CAAATTCGGTTCTAGAAAGGTTT........................................................ 23 1 1 20.00 20 5 4 7 2 1 1
..................................................................................................CAAATTCGATTCTAGAGAGGTTTT....................................................... 24 2 1 19.00 19 16 0 3 0 0 0
..................................................................................................CAAATTCGGTTCTAAAGAGGTTT........................................................ 23 1 1 19.00 19 5 5 3 3 3 0
....................................................................................................AATTCGGTTCTAGAGAGGTT......................................................... 20 0 1 19.00 19 15 2 1 0 1 0
..........................................................AGCCTGTAGATCCGAATTTGC.................................................................................................. 21 2 1 19.00 19 0 19 0 0 0 0
..........................................................ACCCTGTTGATCCGAATTTGTT................................................................................................. 22 1 1 18.00 18 3 2 4 7 1 1
..........................................................ATCCTGTAGATCCGAATTTGTC................................................................................................. 22 2 1 18.00 18 0 18 0 0 0 0
..................................................................................................CAAATTCGGGTCTAGAGAGGTT......................................................... 22 1 1 18.00 18 0 4 4 0 10 0
..........................................................ACCCTGTAGATCCGAATTTGAC................................................................................................. 22 2 1 18.00 18 0 17 0 1 0 0
..................................................................................................CAAATTCGGTTCTAGAGATGTT......................................................... 22 1 1 18.00 18 5 0 4 6 2 1
..................................................................................................CAAATTCGGTTCTAGAGAGGATTT....................................................... 24 2 1 18.00 18 0 0 12 5 1 0
..........................................................ACACTGTCGATCCGAATTTGTT................................................................................................. 22 2 1 17.00 17 0 17 0 0 0 0
..................................................................................................CAAATTCGGCTCTAGAGAGGTT......................................................... 22 1 1 17.00 17 5 2 4 3 3 0
..................................................................................................CAAATTGGGTTCTAGAGAGGTTT........................................................ 23 1 1 17.00 17 1 7 7 2 0 0
..................................................................................................GAAATTCGGTTCTAGAGAGGTT......................................................... 22 1 1 17.00 17 12 0 5 0 0 0
..........................................................AGCCTGTAGATCCGAATTTGTTT................................................................................................ 23 1 1 17.00 17 0 16 1 0 0 0
..........................................................ACACTGTAGATCCGAATTTGC.................................................................................................. 21 2 1 17.00 17 0 17 0 0 0 0
..................................................................................................CAAATTCGGTTCTAGAGAGCTTT........................................................ 23 1 1 17.00 17 3 0 10 0 4 0
..................................................................................................CAAATTCGTTTCTAGAGAGGTTTT....................................................... 24 2 1 16.00 16 14 0 1 1 0 0
...................................................................................................AAATTCGGTTCTAGAGAGGTTTA....................................................... 23 1 1 16.00 16 16 0 0 0 0 0
..................................................................................................CAAATTCCGTTCTAGAGAGGTTT........................................................ 23 1 1 16.00 16 8 2 4 1 1 0
..........................................................ACGCTGTAGATCCGAATTTGT.................................................................................................. 21 1 1 16.00 16 0 2 1 13 0 0
..................................................................................................CAAATTCGGTTCTAGAGAGATTT........................................................ 23 1 1 16.00 16 6 2 6 1 1 0
.........................................................GACCCTGTAGATCCGAATTTGTT................................................................................................. 23 1 1 16.00 16 16 0 0 0 0 0
..........................................................ACCCTGTAGATCCGAATATGTT................................................................................................. 22 1 1 16.00 16 0 5 8 1 2 0
..................................................................................................CAACTTCGGTTCTAGAGAGGTT......................................................... 22 1 1 16.00 16 0 0 10 5 1 0
..................................................................................................CAAATTCGGTTCTAGAGAGGGTTT....................................................... 24 2 1 16.00 16 2 4 4 5 0 1
..................................................................................................CAAATTCGGTTCCAGAGAGGTT......................................................... 22 1 1 16.00 16 1 1 7 4 3 0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTTAT..................................................... 26 3 1 15.00 15 2 0 6 6 1 0
........................................................TCACCCTGTAGATCCGAATTTGTT................................................................................................. 24 2 1 15.00 15 2 13 0 0 0 0
..........................................................TCCCTGTAGATCCGAATTTGTC................................................................................................. 22 2 1 15.00 15 0 15 0 0 0 0
..................................................................................................CAAATTCGGTTCTAGAGAGGTG......................................................... 22 1 1 15.00 15 14 0 0 0 1 0
..........................................................ACCCTGTCGATCCGAATTTGT.................................................................................................. 21 1 1 15.00 15 0 14 1 0 0 0
..........................................................ACCCTGTAGATCCGAATTTGATT................................................................................................ 23 1 1 15.00 15 0 0 8 6 0 1
..........................................................ACCCTTTAGATCCGAATTTGTC................................................................................................. 22 2 1 15.00 15 0 15 0 0 0 0
..........................................................ACCCTGTAGATCCGAATTGGTT................................................................................................. 22 1 1 15.00 15 1 9 0 1 2 2
..........................................................ACCCTGTAAATCCGAATTTG................................................................................................... 20 1 1 15.00 15 15 0 0 0 0 0
.........................................................AACCCTGTAGATCCGAATTTGTT................................................................................................. 23 1 1 15.00 15 11 2 0 1 1 0
..................................................................................................CAGATTCGGTTCTAGAGAGGTT......................................................... 22 1 1 15.00 15 1 0 6 8 0 0
..........................................................ACCCTGTACATCCGAATTTG................................................................................................... 20 1 1 14.00 14 11 0 0 3 0 0
..................................................................................................CAAATTCGGTTCTAGATAGGTTTT....................................................... 24 2 1 14.00 14 0 0 3 11 0 0
..........................................................ACCCTTTAGATCCGAATTTGT.................................................................................................. 21 1 1 14.00 14 3 5 2 3 1 0
..................................................................................................CAAATTCGGTTCAAGAGAGGTT......................................................... 22 1 1 14.00 14 0 1 13 0 0 0
..........................................................ACTCTGTAGATCCGAATTTGT.................................................................................................. 21 1 1 14.00 14 0 10 1 3 0 0
..........................................................ACCCTGTAGATCCGAATTTGG.................................................................................................. 21 1 1 14.00 14 1 1 9 1 1 1
..................................................................................................CAAATTCGATTCTAGAGAGGT.......................................................... 21 1 1 14.00 14 13 0 1 0 0 0
..........................................................ACCCTGTAGATCCGAATTTGCTT................................................................................................ 23 1 1 14.00 14 0 0 8 6 0 0
..........................................................ACCCTGTAGATCAGAATTTGTTT................................................................................................ 23 1 1 14.00 14 1 2 7 4 0 0
..........................................................ACATTGTAGATCCGAATTTGTT................................................................................................. 22 2 1 13.00 13 0 12 0 1 0 0
..........................................................ACCCTGTAGATCCGAAATTT................................................................................................... 20 2 1 13.00 13 7 0 3 3 0 0
..........................................................ACCCTGTCGATCCGAAGTTGTT................................................................................................. 22 2 1 13.00 13 0 13 0 0 0 0
..................................................................................................CAAATTCGGTTATAGAGAGGTTTT....................................................... 24 2 1 13.00 13 0 1 6 6 0 0
..................................................................................................CAAATTTGGTTCTAGAGAGGTT......................................................... 22 1 1 13.00 13 4 2 2 4 1 0
..................................................................................................CAAATTCGGTTCTATAGAGGTTTT....................................................... 24 2 1 13.00 13 0 0 5 7 0 1
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTTA...................................................... 25 2 1 13.00 13 8 0 2 3 0 0
..................................................................................................CAACTTCGGTTCTAGAGAGGTTTT....................................................... 24 2 1 13.00 13 0 0 7 6 0 0
..................................................................................................CAAATTCGGTTCTAGAGAGT........................................................... 20 1 1 13.00 13 3 0 10 0 0 0
..........................................................CCCCTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 13.00 13 3 0 4 1 1 4
..................................................................................................CTAATTCGGTTCTAGAGAGGTT......................................................... 22 1 1 12.00 12 0 9 3 0 0 0
..................................................................................................CAAATTCGGTTCTAGAGATGT.......................................................... 21 1 1 12.00 12 2 0 6 2 1 1
..........................................................ACCTTGTAGATCCGAATTTGC.................................................................................................. 21 2 1 12.00 12 0 12 0 0 0 0
..................................................................................................CAAATTCGGTTCTAGAGAGGG.......................................................... 21 1 1 12.00 12 0 0 10 0 2 0
..................................................................................................CAAATTCGGTTCTATAGAGGT.......................................................... 21 1 1 12.00 12 1 0 6 4 1 0
..........................................................ACCCTGTCGATCCGAATTTGTC................................................................................................. 22 2 1 12.00 12 0 12 0 0 0 0
..................................................................................................CAAATTCGATTCTAGAGAGG........................................................... 20 1 1 12.00 12 10 0 2 0 0 0
..........................................................ACACTGTAGATCCGAATTTGTTT................................................................................................ 23 1 1 11.00 11 0 6 3 2 0 0
..................................................................................................CAAATTCGGTTCGAGAGAGGTT......................................................... 22 1 1 11.00 11 1 0 10 0 0 0
..........................................................ACCCTGTAGATCCGAAGTTGTT................................................................................................. 22 1 1 11.00 11 1 8 0 0 1 1
...................................................................................................AAATTCGGTTCTAGAGAGGTTA........................................................ 22 1 1 11.00 11 11 0 0 0 0 0
..........................................................ACCCTGTAGATCCGAATTTGGC................................................................................................. 22 2 1 11.00 11 0 10 0 0 0 1
..........................................................ACACTGTAGATCCGCATTTGTT................................................................................................. 22 2 1 11.00 11 0 10 0 0 1 0

Anti-sense strand reads

GGAGTGGGTTGTGGCAGTGTGGAACGCCGACACGAGGATAGGTCAAACGAGGTGCAGATGGGACATCTAGGCTTAAACAAAATATGATCAAAATTCCTGTTTAAGCCAAGATCTCTCCAAACACACCAAGTTAAAGGTAGCATTTTATTTTCACAAATTACTTCACTAACCTATTTA

*****************************************..(((..(((((...(((((.((((.(((((((((((((............))))))))))))).)))).)).)))...)))))..)))....******************************************* 		Read size # Mismatch Hit Count Total Norm Total M044

female body

 M058

embryo

 V055

head

 V039

embryo

 V105

male body		 V106

head
..........................................................TTGGAGATCTTGGCTTAAAC................................................................................................... 20 3 8 1.38 11 8 0 0 0 2 1
........TTGTGGCAGTGGGCAACGCAGA................................................................................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0
..............................CACGAGGATAGCACAAACG................................................................................................................................ 19 2 1 1.00 1 0 1 0 0 0 0
.........................................................ATTGGAGATCTTGGCTTAAAC................................................................................................... 21 3 2 1.00 2 1 0 0 0 1 0
...................TGGAACGCCGGCATGAGG............................................................................................................................................ 18 2 4 0.75 3 1 0 0 0 0 2
..................TTGGAACGCCGGCATGAGG............................................................................................................................................ 19 3 11 0.64 7 4 0 0 0 0 3
................................................................................................CTGTTTAAGCCTAGATGTCTCT........................................................... 22 3 2 0.50 1 0 1 0 0 0 0
..................................................................................................................CTCCGAACACACCAAATTA............................................ 19 2 2 0.50 1 0 0 0 1 0 0
..........................................................................AAACAAAATAGGATCAAAA.................................................................................... 19 1 2 0.50 1 0 0 0 1 0 0
................................................................................................CTGTTTAAGCCTAGATCTCCCT........................................................... 22 3 3 0.33 1 0 0 1 0 0 0
.........................................................TTTGGACATCTTGGCTTAAAC................................................................................................... 21 3 4 0.25 1 0 0 0 0 1 0
...........................................................GGGATATCTAGGCTTAAAA................................................................................................... 19 2 5 0.20 1 0 0 1 0 0 0
...................TGGAACGCCGGCATGAGGG........................................................................................................................................... 19 3 15 0.13 2 1 0 0 0 0 1
.....................................................................................................................CAAACACCCCAAGTTCAA.......................................... 18 2 17 0.06 1 0 1 0 0 0 0
.....................................................................................................................CAAAAACACCTAGTTAAA.......................................... 18 2 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_13340:5417318-5417494 + dan-mir-10 Known_mirbase CCTCACCCAACACCGTCACA---------------------------------------------------------------------------------------CCTTGCGGCTG--------TGCTCCTAT------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATTTCCATCGTAA------------AATAAAAGTG---TT-----------TA----------ATGAAGTGATTG-GATAAAT-------------
droBip1 scf7180000396708:3396370-3396545 - CCTTGCCCGACACCGTCACA---------------------------------------------------------------------------------------CCTTGCAAC----------TGTTCCTAT------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGTAA------------AAGAAGAGTGTT--T---------------------TGTTAAAGTGTTTG-GATAAGA-------------
droKik1 scf7180000302639:2316888-2317071 + CCTCACCT---------------GACTTCAT-----------------------------------------------------------------------TATCCCGCAGCGGC----------TGTTCAGCG------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCAACGTAA-AATC-----------ATAA---T---TAAAACTAAAACGAAACCAAGTGA--AAGTGA---------AT-------------
droFic1 scf7180000453835:71942-72109 - AGTCACT----------------GCG-TCAT-----------------------------------------------------------------------TTCAACCCGGCGAC----------TGCTCCCCTCCAGTTTCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTCCATCGAAA------------A-----------------------------------------AGTGAT---------CTCAGCTGATATTA
droEle1 scf7180000491278:1424330-1424517 - T----------------------CAGTTCAT-----------------------------------------------------------------------TTCGCCGCTGCGAC----------TGCTCCCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCAGCGAAA-TAGC-----------ATGA---T--TTCAAATGAAGCCGAAATCAAGTGACAAAGTGAATT-TCAAAAT-------------
droRho1 scf7180000777432:2223-2406 + C-----------------------CGTTCAT-----------------------------------------------------------------------TTCACCCATGCGAC--G---CGACTGTTCTCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTCCAATATCCATCGATA------------AAT-------------CAAAAGAAGCCGGAATCAAGTGAAAAAGTGAATT-TGAACAT-------------
droBia1 scf7180000302155:2026087-2026265 + C-----T----------------GAGCTCCC-----------------------------------------------------------------------TTCGCCCCTGCGAC----------TGCTCGCCT------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTGTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTCCATCGTAAAACGC-----------AT--------TTTGAGTGAAAAAGAAATGGAGTGATAAAGTGA---------AC-------------
droTak1 scf7180000415671:411406-411579 + C-----T----------------GAGTTCAC-----------------------------------------------------------------------TTCGCCCCTGCGAC----------TGCTCTCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGATA-AAAC-----------AT--------TTAAAGTGAAACTGAAATGAAGTGAAAAAGT--------------------------
droEug1 scf7180000409886:257303-257492 + G-------------------------CTCATTCAGC----------------------------------------------------------------------CGCCTGCGACTG----TTA--GGTCTCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACTCTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTTCATCGATA-GCCGAATACGGAAG-----TG------------AAATCAAAAATAAGTGAAAAAGTGAATTATGTATAT-------------
dm3 chr3R:2635171-2635345 - dme-mir-10 Known_mirbase G-----------------------ACTTCAT-----------------------------------------------------------------------TTCGCCCCAGCGAC----------TGTTCCTCA------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAAA------------AAG-----TG------------TTGCTGATGGCAAGCGGAAAAGTGATTT-TATAAAT-------------
droSim2 3r:2529779-2529946 - dsi-mir-10 Known_mirbase T-----------------------------------------------------------------------------------------------------TTCGCCCCAGCGAC----------TGTTCCTCA------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAAA------------AAG-----TG------------TAGCTTATGGCAAGCGATAAAGTGATTT-TACAAAT-------------
droSec2 scaffold_6:2726392-2726559 - dse-mir-10 Known_mirbase T-----------------------------------------------------------------------------------------------------TTCGCCCCAGCGAC----------TGTTCCTCA------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAAA------------AAG-----TG------------TAGCTGATGGCAAGCGATAAAGTGATTT-CACAAAT-------------
droYak3 3R:7777957-7778138 + dya-mir-10 Known_mirbase A-----------------------AGTTCAT-----------------------------------------------------------------------TTCGCCCCTGCGAC--GAACTGA-CGTTCCTCA------TCACTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGGAA------------AAG-----TG------------AAGCTGATGTCAAGCGGAAAAGTGATGT-TGCATAT-------------
droEre2 scaffold_4770:2882516-2882686 - der-mir-10 Known_mirbase C-----------------------AGTTCAT-----------------------------------------------------------------------TTCGCCCCTCCGAC-----------GTTCCTCA------TCAGTTTGCTCTACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGGAA------------AAG-----TG------------AAGCTGATGTCAAGCGGAAAAGTGATTT-T---CAT-------------
dp5 2:19739425-19739622 + dps-mir-10 Known_mirbase C-----T----------------CGGCGCCC----------TCGGGCATGGCACCGGGCTCCACACCCCGTCCTCTGCAGGCAGTTTTTTTG----GTTCTC----------------------------------------AAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTACAACGAAA-ACAG-----------ATAG---TTATTA----------------AAGTGA-AAAGTGAT-----------------------
droPer2 scaffold_3:2487618-2487825 + dpe-mir-10 Known_mirbase C-----T----------------CGGCGCCC----------TCGGGCTTGGCACCGGGCTCCACACCCCGTTCTCTGCAGGCAGTTTTTTTG----GTTCTC----------------------------------------AAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTACAACGAAA-ACAG-----------ATAG---TTATTAAAGTGAA---------AAGTGATAAAGTGC--------AAG-------------
droWil2 scf2_1100000004902:12007325-12007425 - dwi-mir-10 Known_mirbase T-----------------------A-------------------------------------------------------------------------------------------------------------C------TCGCTTTGTTCTACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTTTTTAAGGACAAATTCGGTTCTAGAGAGGTTTAAGTGGTTCAATGTTC------------------------------------------------------------------------------------------
droVir3 scaffold_13047:6092020-6092154 + dvi-mir-10 Known_mirbase G-----T---------TACACCTGTGTGTAT-------------------------------------------------------------------------------TGCCAC----------GCGTCT-A---GGTTTCACTTTGTTCCACGTCCACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTCTGTGGCTCATTGTCCAGCG--------------------------------------------------------------------------------------
droMoj3 scaffold_6540:16502863-16503002 + dmo-mir-10 Known_mirbase A-----------------------CATTAAT----ATGCAT-------------------------------------------------------------ATAAATATGAATG--------CA--TGTCT-A---AGTTCCACTCTGTTCCACGTCTACCCTGTAGATCCGAATTTGTTGTACCATAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTATGTGGCTCATTGTCCAGCG--------------------------------------------------------------------------------------
droGri2 scaffold_14906:11443509-11443681 + dgr-mir-10 Known_mirbase A-----T------------------A---------------------------------TATATATATATATATATACATATAGTTTATATATACTGTTTT-----------------------------------------CACTTTGTTCCACGTCTACCCTGTAGATCCGAATTTGTTGTACACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGCTCAATGCCCACCGAAA-TGAG--TA---AAGAAT----------------------------AGTGA-ATAGTGAA-----------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CCTCACCCAACACCGTCACA---------------------------------------------------------------------------------------CCTTGCGGCTG--------TGCTCCTAT------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATTTCCATCGTAA------------AATAAAAGTG---TT-----------TA----------ATGAAGTGATTG-GATAAAT-------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTT....................................................................................................................................................221107386.001073863065425704251927181923626555
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT..........................................................................................................23172010.007201037540119114792054165363490
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGT.....................................................................................................................................................21110625.0010625405414119343619912640
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT...........................................................................................................22110012.001001238278683952335241231
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT.........................................................................................................2414130.0041301220161818114171143
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT...................................................................................................................................................2313914.0039141462256341017831278
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT..........................................................................................................2213125.00312529404331410421
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT............................................................................................................2113098.0030988029072281757214
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTC....................................................................................................................................................2212941.002941512837241829
................................................................................................................................................................CCCTGTAGATCCGAATTTGTT....................................................................................................................................................2112785.0027852761110076
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.............................................................................................................2011659.00165948522280963107
...............................................................................................................................................................ACCCTGTAGATCCGAATTTG......................................................................................................................................................2011543.001543113920453225102
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC..........................................................................................................231656.00656762213221
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG..............................................................................................................191368.003681031052319532
................................................................................................................................................................CCCTGTAGATCCGAATTTGT.....................................................................................................................................................201367.0036736410011
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGC.....................................................................................................................................................211346.00346432103153
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT...........................................................................................................211344.00344317211185
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA.........................................................................................................241207.002071331414478
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA...................................................................................................................................................231205.002058563112926
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT..........................................................................................................211203.00203172260140
.................................................................................................................................................................CCTGTAGATCCGAATTTGTT....................................................................................................................................................201191.0019116781096
................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT...................................................................................................................................................221159.00159140200512
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT.........................................................................................................231132.00132112101135
...............................................................................................................................................................ACCCTGTAGATCCGAATTT.......................................................................................................................................................191115.00115561193234
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTG....................................................................................................................................................221114.0011410530213
................................................................................................................................................................CCCTGTAGATCCGAATTTG......................................................................................................................................................191105.0010510400001
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC...........................................................................................................22181.00817670151
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG..........................................................................................................23176.00762314152211
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT..................................................................................................................................................24172.0072212041332
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTA....................................................................................................................................................22167.006735210074
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG.........................................................................................................24162.00624910282
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA..........................................................................................................23160.006029207202
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGA.....................................................................................................................................................21158.005820013619
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGA...............................................................................................................18153.005320118347
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT............................................................................................................20152.00524600150
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC...................................................................................................................................................23151.005115330021
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA..................................................................................................................................................24147.00473141083
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC.........................................................................................................24142.004219801113
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGT.....................................................................................................................................................22142.004213163055
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGTT....................................................................................................................................................23142.00423210144
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG...................................................................................................................................................23140.00403321103
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGG.............................................................................................................19139.00393500040
.............................................................................................................................................................................................................TCGGTTCTAGAGAGGTTT..........................................................................................................18139.00393630000
...........................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT..........................................................................................................20139.00393080010
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA............................................................................................................21139.00392000334
.......................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT..........................................................................................................24138.00382490050
...............................................................................................................................................................ACCCTGTAGATCCGAATT........................................................................................................................................................18138.003826100002
..................................................................................................................................................................CTGTAGATCCGAATTTGTT....................................................................................................................................................19133.00332431041
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC............................................................................................................21133.003311903100
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA...........................................................................................................22131.003116101103
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA........................................................................................................25127.00272000142
.................................................................................................................................................................CCTGTAGATCCGAATTTGT.....................................................................................................................................................19125.00252310001
............................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT..........................................................................................................19124.00242030010
...................................................................................................................................................................TGTAGATCCGAATTTGTT....................................................................................................................................................18123.0023600197
...............................................................................................................................................................ACCCTGTAGATCCGAATTTT......................................................................................................................................................20120.0020431147
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT...........................................................................................................20119.00191520110
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGAC....................................................................................................................................................22118.00180170001
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTA.........................................................................................................23116.00161600000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTAT.......................................................................................................26115.0015200166
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTG...........................................................................................................22115.00151400100
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGG.....................................................................................................................................................21114.0014111191
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTA........................................................................................................25113.0013800023
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGT.............................................................................................................20113.00133000100
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG............................................................................................................21112.00120002100
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTA..........................................................................................................22111.00111100000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGGC....................................................................................................................................................22111.00110101000
droBip1
CCTTGCCCGACACCGTCACA---------------------------------------------------------------------------------------CCTTGCAAC----------TGTTCCTAT------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGTAA------------AAGAAGAGTGTT--T---------------------TGTTAAAGTGTTTG-GATAAGA-------------SizeHit CountTotal NormTotal
No Reads
droKik1
CCTCACCT---------------GACTTCAT-----------------------------------------------------------------------TATCCCGCAGCGGC----------TGTTCAGCG------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCAACGTAA-AATC-----------ATAA---T---TAAAACTAAAACGAAACCAAGTGA--AAGTGA---------AT-------------SizeHit CountTotal NormTotal
No Reads
droFic1
AGTCACT----------------GCG-TCAT-----------------------------------------------------------------------TTCAACCCGGCGAC----------TGCTCCCCTCCAGTTTCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTCCATCGAAA------------A-----------------------------------------AGTGAT---------CTCAGCTGATATTASizeHit CountTotal NormTotal
No Reads
droEle1
T----------------------CAGTTCAT-----------------------------------------------------------------------TTCGCCGCTGCGAC----------TGCTCCCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCAGCGAAA-TAGC-----------ATGA---T--TTCAAATGAAGCCGAAATCAAGTGACAAAGTGAATT-TCAAAAT-------------SizeHit CountTotal NormTotal
No Reads
droRho1
C-----------------------CGTTCAT-----------------------------------------------------------------------TTCACCCATGCGAC--G---CGACTGTTCTCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTCCAATATCCATCGATA------------AAT-------------CAAAAGAAGCCGGAATCAAGTGAAAAAGTGAATT-TGAACAT-------------SizeHit CountTotal NormTotal
No Reads
droBia1
C-----T----------------GAGCTCCC-----------------------------------------------------------------------TTCGCCCCTGCGAC----------TGCTCGCCT------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTGTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTCCATCGTAAAACGC-----------AT--------TTTGAGTGAAAAAGAAATGGAGTGATAAAGTGA---------AC-------------SizeHit CountTotal NormTotal
No Reads
droTak1
C-----T----------------GAGTTCAC-----------------------------------------------------------------------TTCGCCCCTGCGAC----------TGCTCTCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGATA-AAAC-----------AT--------TTAAAGTGAAACTGAAATGAAGTGAAAAAGT--------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
G-------------------------CTCATTCAGC----------------------------------------------------------------------CGCCTGCGACTG----TTA--GGTCTCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACTCTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTTCATCGATA-GCCGAATACGGAAG-----TG------------AAATCAAAAATAAGTGAAAAAGTGAATTATGTATAT-------------SizeHit CountTotal NormTotal
No Reads
dm3
G-----------------------ACTTCAT-----------------------------------------------------------------------TTCGCCCCAGCGAC----------TGTTCCTCA------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAAA------------AAG-----TG------------TTGCTGATGGCAAGCGGAAAAGTGATTT-TATAAAT-------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTT....................................................................................................................................................2211499097.0014990970000567402263107701100600212511470271374615533175869147128130231219512347518861270328110610810866000156892400000000000000000242311102517412221117840278144461410572513129310082168896160330091516244459328168420219206266212411551135031645330470042151627223603078649010779159059861323744083151064381159152202450000001010191412121161010319240681846171349471092379246628653410153210712971743654205362130401710368265717625115015214637725116174257640009933753247524986317379785021301281584257526250023790018430192861176139024211611653264088395711211976020521841861838369365711564117043511111337220338382661835502171432012365815911051701794136093245303016703264104894747291386710278517449761260411520966628287294051934682149299434783799099852710962758017144251041716571425541252242898423345382438487099636468702972121374163312752
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT..........................................................................................................231647414.00647414000068943313114435116079118010012301516126290141393816596618656450325111573411333463411241938313872410001582153133000000000000000000543261263855233782487312015580132350419510340040990322723142569502314101933326107886250332303373118613535223686510169384188983411023537413244050344202618192467198427892529167971532221325718332834522300000700111431173216025798245117622621911082442375258454390370101023591180228502044228817075157561172760502000193919342513782414504004112846177901438642616949711788389220262997360052160085956734422539843436010220850542618620403441879825281278018639464131217031281301153541611974528905541452224400744329151557869489452343707741073733759482140701735572957714001800052398415096267177131521942944837462301043714549628274593562037494632662516947251862974826158950296217310
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT...........................................................................................................221138858.00138858000051741683212890150020001549507019952195349259712141321392343421789880002062025300000000000000000110014262241811242601951528029112120874192719195555209420090155128208011682551016097542159642565732011256029244210335830533038513101434125346311120000000000068972005624122193391582179584901018341100005406334563124705011120512521130500015027390231000003530228221709483411082464741179175120118600773670255631387026203020879200761319611801947116629870630241001839081736222061018108498010110701957210720712294275845901779107037121621052431523225020460044526022938758162618212628383605481483864961861028250935200734866853017033300
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGT.....................................................................................................................................................211131646.001316460000020116131010000027140040651473126115081142061246310137441000107883200000000000000000110271012355400258991041834537511881157861500027619132217138381200822423644911315021651014113828642115192023481485777128000010000000315346021398188145178053304563877001030635159372247942317011934618611161010052191252236000007626523194247221697820815206246330008200775840161020610403463116137821013441416831160299841650732087129000470357438324873842978215137103103423123410956501712161532672090149978396896285177520399725713750713041714832874311918642174121513610210738992840494519775662465968712638881615
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT............................................................................................................21131375.00313750000260048002021020002242300021133765022360101030534111220000726522000000000000000000001222622000017441813102416192245572100010388682414014111110013924114625802522030033163168102457418400320000000400012012706833307014421105814140000072239139499530025212802503000236901722300326142116490316402746777620000116700205136014675420020680023100025975400205912905507064011000291802111843227229911405415124063755252036243562086534735782272125211134999016861641811387203031382174519126713021735126910831134138070266415
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT.........................................................................................................24118860.001886000000215161130100000011300100000000032000100050000022100000000000000000000000000013116181002129312615282292616300002221590240103020011101208100000000501168110923044424322010000000000039820444329305181549987000004823131515200052142126000004246001000000134636524242510141034152900001050093660773301005422095000100053104125163640100300034218744285732948184000058289163149128272342806733308144342786480116961404842122819130107821209211511049781346853608121398510206200
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.............................................................................................................20115056.001505600001100010000207400007500000000003251130000100100012010001110200000000000000000000012124000315111331320101800000110133070198050105221519104381535105546141848000012326003000000000000338402215142310155497781200000407739153100071052503000010003100000868550466037616121561021520024210423110157550105000932150061050274990200500025765599771036000130120311518025461100130631623112822941023340034890893250003311150679101234221310045776186979015093000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT...................................................................................................................................................23113353.0013353000000000100000001001201000010000020300000102130000000002622400000000000000000000004377000102000002120130200001010120400000021300000000000000034437564251230441402000000000005140500480211581950000069047323700011512801100000324533030000052316936451113310200800017600102900896110084405800020901100182622871410410300034336693534333130241010015423610151642216733534719552460194051961306671126102311400168212014021524960496305887674843223919620
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTATC........................................................................................................2519737.009737000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000082601477000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTG......................................................................................................................................................2018795.00879500003100110000000000100100000000008320000000100000012000001272000000000000000001000111416161009024104712342082793200038624608015401033102032011000000071721500110126004000000000000328402020172832505596416000007181532321000110059000000060040000005231111810305121100700002100474104919100137420380008128104135199360000100035200971291431272000036110060821645011513589431223168213370215381021443249112002311201634418395308992231383062013100
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT..........................................................................................................2214723.004723000000000100000000000071000000000000000020021221211020001116000000000000000000010032320001020001110034010000000000010930101120305320000010010192730110100170010000000170000444103000144031203237420000031591716140003217530000051300000000071715912811379584200000000493202250000133014000340500181038340010100063743093641600003533533751370356594224574856132017516500201626149830024020199513669183109180181179101900
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG..............................................................................................................1913705.00370500000000000000004200003400036427100100000030001020001000182150000000000000000000000000200060410025120213820000000000030400100000011200372900003213600001101100000000000000073504334852612119500000146259130005003520100054100000000111181195155415330020000033220147000013221380002302002520834700101000102309128190000894141504116562019564410258701551160001129163800038020174017619216393129160150400300
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA...................................................................................................................................................2312658.0026580000000001000000000000120000000000100000000000000200000000000000000000000000000002232113000180110392003000000011151040010000000000000000000004492614012151412640000000000000001100001310020300000032410810000230301000002120000000002318170361049130000725100161002000007105000150100267011220010000058411756752422000095225926217201480448310575100148411361000190102641451243238061770021900
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTC....................................................................................................................................................2212610.00261000000000031000000000000000000000000010000000000001001000000000000000000000000000001310004010000000103000000000000000000000100000000000000001571201010040010000000000002501007102043730000039121188000240221000007112000000003244153000200000000000019250121000070090006206004510191800000000131121171467320000064992121691271612172183812721931030201114166200016020204129152933129851170032200
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA.........................................................................................................2411901.0019010000100200000000000000300000000000100000000000000100000000000000000000000000000001000710020131012137103592000006123201002000000201011000000000022516001451040000000000000001111090191012060110000001025348000204270000031100000000028451704006510040000153780076062000052070009030023107300000000105261732001200004292715193944151729213440049500041126120003010461633712455714862001200
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC..........................................................................................................2311084.001084000023115723100000000010000000000000000000010000000000000000000000000000000000000621100039061001110017210010020111012000000000000210000000000113300000020000000000000003701210911203116000000131832200080700000051000001000133523010000000000114001090110100200600080200120011800000000315412270200007141672064541033271004420442500012430000603034023302824372833003100
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGA...............................................................................................................1811081.001081000000000000000000000001000052023100100000000000000000009820000000000000000000000007000000000200523000000100000020000000000100301133911300000303300000006000000000000000060210122050151100000328140200016010006000062000000002914010800130000000000002714023000013040009000011601050010000003240005000025124111017279752810002301619001013000000001301514231272326100000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA..................................................................................................................................................2411044.001044000000000000000000000000000000000000000000000000020000000000000000000000000000000308020000300100200200000000000000000000000000000000000000023416005515720000000000000000000000110000000000000262500001100000001000000000000201400210000000000200100000100000010000017024000000009557021721214000021010302201000120630018531140000101022010451065000000
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGT.....................................................................................................................................................2211019.001019000000000000000000000001000000000000000001000100000000000000000000000000000002310507210000400002100206100310011200100100000000002000000000002740010006010000003500000030210111003011220500001733260020019000000251221103320001224230010021000000000271900101000001000110300124016500000000181132512000012652994589125511021712431011433000001001056112514103424300026017
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA..........................................................................................................231986.00986000002032933400000000020000000000000000000000000000000000000000000000000000000000621000043022000160000200000210030128030000102020100000000000073000110010000000000000003130410140409125000000714304000302500000022000000000032411130005100000159230093011000052070001020001101040000000012020602000048119141815553171021180242600402282000901015629173911152228000300
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT...........................................................................................................211930.009300000000000000000000000500000000000000000000000000000000000100000000000000000000000001000100000100000000000000000000011020221000020000000000053100001010000000000000006904006743082219000001223020005090000000000000000003259031001100000000063053000032060008010001207130000000005230702000041014111925391284131326400423500032430000800028056335534273739200100
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTG....................................................................................................................................................221812.008120000000000100000000000000000000000000000000000000000000000000000000000000000000002011000300000000000000000000000002000000002000000000000000346140000001010000000000000000010000002263232800001212000020151000001100700100000014110000000000000000049031000040000002010039033000000006710642600002991271178210281020480113129000001000001000701101145000000
...................................................................................................................................................................TGTAGATCCGAATTTGTT....................................................................................................................................................181805.008050000000000000000000000000000000000000000000000000000000000000000000000000000000008011000002000011001010000000012200000000000000000000000000411112020000180000000000000000000001200020000000043915291700046013218000000140500000001242200000000000000009130100000000100030000020230000100001000070600006020144295433111212013190102310000301029220299251733000103
...............................................................................................................................................................ACCCTGTAGATCCGAATT........................................................................................................................................................181729.00729000000000000000000000000000110001000000000000000000000001100000000000000000000000000000000000000000100000000000000000000000000000011524360000000020000000100000000000000001002100001100300000203000003020100000100000000020273000021000000000005901100001000000201001502200000000000001000000010122112020000101200000000000000000000000000100
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTA....................................................................................................................................................221651.0065100000001140020000000000000000000000000000000001000000000000000000000000000000000010000006000000000000010000000000000000000000000000000000001105800000000000000000000002001020301032420000021711000405000000120000000000286970000000000001160067010000011040001000001601100000000126110120600001110311133246302380202200155490000100202941149617611000600
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG..........................................................................................................231593.005930000110006323000000000000000000000000000000000000000000000000000000000000000000000002000690000000011000000000010020180200101000000000000000001011000000100000000000000056040013000303630000006400000000140000000000000000000541600000000000000002202000001303000003000203200000000414124110000101815183750213420201602916000014000010006031851422000000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGC.....................................................................................................................................................211550.005500000000000000000000000000000000000000000000000000000000000000000000000000000000000001100001000000000000000000000000010000000000000000000000011210000120000000000000004202000000040500000085314000300000000000000000000087000000000000000034010000010030008000018033000000002453124210900003862489999292015390274000042280000900016214810810811100100
................................................................................................................................................................CCCTGTAGATCCGAATTTGTT....................................................................................................................................................211523.00523000000001100000000000000000100000000000000000001000000000000000000000000000000000822500000600003020142100000100232000000000000011000000000021150000004000000000000000770901870606590000001823110006050000003200000000002110010000000000000089030000020000003040003013000000003200628120000542141615112100002041300021332010802027175133272134002200
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGTT....................................................................................................................................................231517.0051700000000000000000000000000000000000000000000000000000000100000000000000000000000000020100000000100000000000000010000000000200000000000000000030011000900000000000000010010001000200000000012513000150130000000200400000000712010000000000000067051100030010004010001903500000000022613010000513012713621200039034300002325100040003801261810252829000600
................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT...................................................................................................................................................221440.0044000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000001000000000003020000000100000000000000001011030000001000000164121009012000000000000000000076000000000000000035041000011020009000008044000000001514070200005331141512000301001223000135210008000560136105212533000500
..................................................................................................................................................................CTGTAGATCCGAATTTGTT....................................................................................................................................................191408.00408000000000000000000000001000000000000000000000000000000000000000000000000000000000301120000000000000000000000000010000000000000000000000000005102000110020000000000000000000001001000000000021116140001303000000040000000000319220000010000000000750000000000200030200050220000000021802040400005201435317243010150913000023100030001705436131312000005
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG.........................................................................................................241378.00378000000010000000000000000000000000000000000000000000000004533170000000000000000000000302300000400210100000000100001040200000000000000000000000001100000100000000000000020120100000202180000002801100020300000001000000000148700000101000000003300000000001000100000300200000000003103010000253041020060301007049000005100020005077118241813000000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGG.....................................................................................................................................................211377.0037700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001010000000000000000000000021010011000721600000061010000001000000000000000000062000000000000000024002010010010005000002033000000003913112300004023291724101064230114180353500001500000000103102031000000
...............................................................................................................................................................ACCCTGTAGATCCGAATTT.......................................................................................................................................................191334.0033400000000000000000000000000001101102000000000000000000000424000000000000000000000000001001000010000200000030000102040000000000110000612000001002000000170000000000000003290310211014050000009481000040200200000000000000019160412010000000000420210000010300040000212071000020000902140300007322511020401015034000018000010005061054357100100
.................................................................................................................................................................CCTGTAGATCCGAATTTGTT....................................................................................................................................................201334.00334000000000000000000000000000000000010000000000010000000000000000000000000000000000022000000000000000020000000000000001001000000000000000000011300100001000000000000000030001000200050000000211100020400000010000000000001411000110000000003170100000000000030300070210000000072734391200002200112150100011020422002008000020002511261182319000300
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC.........................................................................................................241325.0032500000000000000000000000000000000000000010000000000010000000000000000000000000000106270001030000110001130000000001100000000000010000010000000010000000040000000000000000200000202021100000004002000004000000100000000000086000102000000481700120010000300100030000160540000000020110401000030053812000300215046000021820001000807111351280000000
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT.........................................................................................................231293.00293000000001000000000000010000000000000000000001100000000000000000000000000000000000003000000000000010000000000000000001000000100000000000000000000000001000000000000000330001110100350000001130200010400000000000000000024300000010000000002001200000000000201001200100000000041600010000191428710160101801533008029000010009012202065178001200
.......................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT..........................................................................................................241289.0028900001001020000000000000000000000000000000000000000000000250000000000000000000000020040000020101130008000000000012000000000000000000000000000107000000000000000000000031010002030002000000060200004020000000000000000002220404000000000000430000000010000030100020210000100002061201000032610361044670000601070030461000401010043134693100100
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA...........................................................................................................221288.002880000010001101000010000110000000000000000000000000000000000000000000000000000000001000000201200001000000000000000000020010000010000000000000022000000010000000000000003301000101000100000010103000201000000020000000000137020001010000110001100210003201000001000404400000000030000000000553612011107100260111000002160000000017110222164813001000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTC..................................................................................................................................................241276.002760000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139136000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TTATACTAGCT-TTAAGGA.................................................................................................................................181258.00258000000000000000000000000000000000000000000000000000000000000000000000000000000000200020000000000100010000000000200000000000001001000000000010100000100000000000000000010100010001000000000101000000000000000000000000012200100000000000007608000001000000100000102100000000000000000000210021038522030000300200000000000000000000001000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA........................................................................................................251237.00237000000000000000000000020000000000000000000100000000000000000000000000000000000000500010000000001200000000000100100100000000000000000000000001020030400000000000000000012010000000001000000031110000035000000000000000002620140002130000000000010000010000001000000012000000009611211010000013412501110000702300242500000000800243263000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTC........................................................................................................251225.00225000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000015654000000000000000000000000100000000000000000010000010001010000010001000001000000000200002000000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC...........................................................................................................221220.0022000000000000110000000000000000000000000000000000000000000000000000000000000000000010000003020000000000000000000000020000000000001000000000000001000000000000000000000012010010000404000000911100002000000000000000000000360000000000002000100100000000000000000030310000000002022501000035846231204010019115900000600001000806111061015001100
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC...................................................................................................................................................231212.002120000000000000000000001000000000000000000000000000000000000000000000000000000000000001000010000000000100000000000001000000001000000000000000013810000000000000000000000100000000000200000000000000105000000000000000000033000000000000261700430200000200100020000060300000000019010614000020001149310110001021001007000010109011511293000300
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTAT.........................................................................................................241203.00203000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000100000000000000000000000001000000000000000010000000001000000000000000000200000000000000000001000000000000010921000000000000000000100000001000000000021301010000022210000000000005100000900001000207457015000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC............................................................................................................211197.001970000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000001000000001000000000000000000000003200000001040300000000100000100000000000000000000132000000000000600000000000021010004000016071000000000310030200001462412022071000210158100005000020003065536104000000
...........................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT..........................................................................................................201194.00194000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000102000010002010000000000000000000000000000000000000460310071201000000001110000010000000000000000000011721000000000000000040000000000010001010000010000000003150604010000121011115200300002041000003000001000103051374000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG............................................................................................................211191.0019100000000000000000000000000000000000000000000000010000000000000000000000000000000000000001000000010000000000000000000000000000000000000000001000000000000000000000000011010001001647000000000000000000000000000000000000410000000000000000210000000000300030200060650000100010100010000012142110007200100000120121500000100001000000111224000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTAC.........................................................................................................241168.00168000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013329000000000000000000000000000000000000000000000000000000000010000000100000100000000002010000000000
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT............................................................................................................201165.00165000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000110000010100000000001020200010100000000000000000031313000000000000000000000000020000002000005033000000000200000000003312216312000008033000007000030009071278465000000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGA.....................................................................................................................................................211162.0016200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000013010010010005100000200000001020000000000000000000530000000000003000200000000100000000100040000000000018140702000023311033320411009052300010910000000001110023000000
droSim2
T-----------------------------------------------------------------------------------------------------TTCGCCCCAGCGAC----------TGTTCCTCA------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAAA------------AAG-----TG------------TAGCTTATGGCAAGCGATAAAGTGATTT-TACAAAT-------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTT....................................................................................................................................................221217078.0021707811214374698834890997743441651629201274310253321262684798124
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT..........................................................................................................231135074.0013507480511772331242160532151109616694346866674886374014238291187167428
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGT.....................................................................................................................................................21144410.00444101028317348913285132617924224321649117626491095000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT...........................................................................................................22144113.0044113103641368256542192182106126229919861470227836652992240
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT............................................................................................................2119073.0090739342072165710353241394759751637561041313073511
...............................................................................................................................................................ACCCTGTAGATCCGAATTTG......................................................................................................................................................2019034.00903436143379557162723261138311064311108000
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGT.....................................................................................................................................................2214033.004033851304531235232123730051211000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGG.....................................................................................................................................................2112895.002895562144387790020000200000
...............................................................................................................................................................ACCCTGTAGATCCGAATT........................................................................................................................................................1812345.002345286420415688231383551100000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGC.....................................................................................................................................................2111975.00197566584845910000010100000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.............................................................................................................2011763.00176320940483239294169126268054126049111
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT..........................................................................................................2211563.001563818371278623020220181149010
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA...................................................................................................................................................2311516.0015167247573616005214103390702000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTC....................................................................................................................................................2211366.001366126329851700217813400000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT...................................................................................................................................................2311301.001301583533351307834701327174167015000
................................................................................................................................................................CCCTGTAGATCCGAATTTGTT....................................................................................................................................................2111290.001290811242498181031550300000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGA...............................................................................................................1811283.0012837205148033815116280300000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT.........................................................................................................2411235.001235602211101830027713141690520136
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG..............................................................................................................1911213.001213192353170633328624261603002
...............................................................................................................................................................ACCCTGTAGATCCGAATTT.......................................................................................................................................................1911035.0010351732346483681371789120401000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC..........................................................................................................231441.0044111113717050030130209000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG............................................................................................................211439.0043974163175230011000002000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA.........................................................................................................241401.0040126429002052931051267011
................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT...................................................................................................................................................221365.00365578919972010010801000
...................................................................................................................................................................TGTAGATCCGAATTTGTT....................................................................................................................................................181324.003242253196100333483100000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA..................................................................................................................................................241314.003141517891100201970001000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTG....................................................................................................................................................221307.0030789519500000000900000
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT...........................................................................................................211298.0029811191120311215604033001
..............................................................................................................................................................TACCCTGTAGATCCGAATTTG......................................................................................................................................................211287.002872114261014215110102000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC...........................................................................................................221273.002731011154850000100003000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC............................................................................................................211271.00271701217440010000001000
.................................................................................................................................................................CCTGTAGATCCGAATTTGTT....................................................................................................................................................201182.001821232942900100301001000
..............................................................................................................................................................TACCCTGTAGATCCGAATTT.......................................................................................................................................................201174.001741000003170000000000
................................................................................................................................................................CCCTGTAGATCCGAATTTGT.....................................................................................................................................................201165.00165243116840008200000000
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGTT....................................................................................................................................................231147.00147202543800630630402000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC.........................................................................................................241123.0012322374530010630204000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA..........................................................................................................231116.001162631800514501071000
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT............................................................................................................201110.00110126911011210004000
..................................................................................................................................................................CTGTAGATCCGAATTTGTT....................................................................................................................................................191110.001107136260011664400000
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT..........................................................................................................211102.00102012902100030002001
.......................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT..........................................................................................................24186.008623271312025501024001
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA...........................................................................................................22185.008552331900201000032000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTA....................................................................................................................................................22177.007711381250030321200000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG...................................................................................................................................................23173.00736193670040000100000
....................................................................................................................................................................GTAGATCCGAATTTGTT....................................................................................................................................................17173.00730000002603287000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG..........................................................................................................23172.00726282450000000207000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTG...........................................................................................................22166.006614321420000000004000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG.........................................................................................................24155.00555516154000140005000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA........................................................................................................25155.00551334002310700022000
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGG.....................................................................................................................................................22147.00475142800000000000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGA.................................................................................................................16134.00340000005210170000000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC...................................................................................................................................................23133.003306670050510300000
..............................................................................................................................................................TACCCTGTAGATCCGAATT........................................................................................................................................................19131.0031224000122000000000
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT.........................................................................................................23130.0030002190010000008000
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGC.....................................................................................................................................................22128.0028432100000000000000
............................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT..........................................................................................................19127.0027236100000030102000
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTA.........................................................................................................23127.0027000500001100020000
.................................................................................................................................................................CCTGTAGATCCGAATTTGT.....................................................................................................................................................19125.002578540000010000000
...........................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT..........................................................................................................20124.0024016120000020003000
.......................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTT...........................................................................................................23123.002345430010120102000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAG................................................................................................................17123.0023000000201470000000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGA.....................................................................................................................................................21123.00231011000010100000000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTT......................................................................................................................................................20117.001755130001200000000
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGG.............................................................................................................19117.0017100150000010000000
................................................................................................................................................................CCCTGTAGATCCGAATTTG......................................................................................................................................................19116.0016111121000000000000
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGA.....................................................................................................................................................22116.0016000000115000000000
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT...........................................................................................................20115.0015111100000100001000
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGTA....................................................................................................................................................23115.0015010000014000000000
...............................................................................................................................................................ACCCTGTAGATCCGAAT.........................................................................................................................................................17113.001300000052132000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGG...............................................................................................................18113.001385000000000000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGT...............................................................................................................18113.001374100000000100000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA............................................................................................................21113.001355010010000001000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTTATACT.............................................................................................................................................29112.001206500010000000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTAA.........................................................................................................24111.001110010000020007000
..............................................................................................................................................................TACCCTGTAGATCCGAAT.........................................................................................................................................................18110.001000200008000000000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTTAT................................................................................................................................................26110.001062200000000000000
..................................................................................................................................................................CTGTAGATCCGAATTTGT.....................................................................................................................................................18110.001023200100110000000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTAA...................................................................................................................................................2319.00917000000000001000
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAG..............................................................................................................1819.00900033300000000000
droSec2
T-----------------------------------------------------------------------------------------------------TTCGCCCCAGCGAC----------TGTTCCTCA------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAAA------------AAG-----TG------------TAGCTGATGGCAAGCGATAAAGTGATTT-CACAAAT-------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTT....................................................................................................................................................221161175.001611753530777073389099886
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT..........................................................................................................23197296.00972963608637344197074159
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT...........................................................................................................22119300.00193006131970620421421
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGT.....................................................................................................................................................21114501.0014501368588068971113
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT............................................................................................................21112774.0012774339769921592793
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.............................................................................................................2015074.00507413302945253546
................................................................................................................................................................CCCTGTAGATCCGAATTTGTT....................................................................................................................................................2113466.003466342024166
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT..........................................................................................................2213265.003265283828411924
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT.........................................................................................................2412161.0021613271485190159
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT...................................................................................................................................................2311749.0017493541046193156
...............................................................................................................................................................ACCCTGTAGATCCGAATTTG......................................................................................................................................................2011605.00160564379354115
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT...........................................................................................................211534.0053446253136
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG..............................................................................................................191385.003851321446940
................................................................................................................................................................CCCTGTAGATCCGAATTTGT.....................................................................................................................................................201372.00372366600
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT............................................................................................................201311.003112663465
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT..........................................................................................................211239.0023919930100
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTC....................................................................................................................................................221190.0019025102549
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA.........................................................................................................241178.0017866633613
.................................................................................................................................................................CCTGTAGATCCGAATTTGTT....................................................................................................................................................201176.0017613220231
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA...................................................................................................................................................231165.001656072285
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG............................................................................................................211119.00119113420
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA...........................................................................................................221118.00118357229
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGG.............................................................................................................191117.00117952101
...............................................................................................................................................................ACCCTGTAGATCCGAATTT.......................................................................................................................................................19184.008444111415
................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT...................................................................................................................................................22180.00804317137
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGT.....................................................................................................................................................22177.00771837139
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC..........................................................................................................23174.00741733213
................................................................................................................................................................CCCTGTAGATCCGAATTTG......................................................................................................................................................19171.007171000
.....................................................................................................................................................................................TTATACTAGCT-TTAAGGA.................................................................................................................................18166.006600651
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGA...............................................................................................................18166.0066182415
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA..........................................................................................................23165.00652723105
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGG.....................................................................................................................................................21160.006060000
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGTT....................................................................................................................................................23159.00592420132
.......................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT..........................................................................................................24158.005838893
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG.........................................................................................................24150.005042440
..................................................................................................................................................................CTGTAGATCCGAATTTGTT....................................................................................................................................................19148.0048291261
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT.........................................................................................................23147.0047331211
...............................................................................................................................................................ACCCTGTAGATCCGAATT........................................................................................................................................................18146.0046150265
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTA....................................................................................................................................................22140.0040181444
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG...................................................................................................................................................23138.003833320
...................................................................................................................................................................TGTAGATCCGAATTTGTT....................................................................................................................................................18136.0036812160
...........................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT..........................................................................................................20136.003624930
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTG....................................................................................................................................................22134.003424523
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA............................................................................................................21131.003162104
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT...........................................................................................................20129.002921800
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC...........................................................................................................22128.002871542
.................................................................................................................................................................CCTGTAGATCCGAATTTGT.....................................................................................................................................................19126.002623111
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGGT..............................................................................................................19126.002681251
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC.........................................................................................................24126.002691250
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGC.....................................................................................................................................................21126.002632012
............................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT..........................................................................................................19124.002423010
...............................................................................................................................................................ACCCTGTAGATCCGAATTTT......................................................................................................................................................20124.002422200
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG..........................................................................................................23123.002316322
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGT............................................................................................................19122.002212910
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC............................................................................................................21121.002141511
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGG.............................................................................................................18120.002016130
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA........................................................................................................25120.00207841
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC...................................................................................................................................................23119.001910522
.............................................................................................................................................................................................................TCGGTTCTAGAGAGGTTT..........................................................................................................18118.001818000
................................................................................................................................................................CCCTGTAGATCCGAATTTGTG....................................................................................................................................................21118.001818000
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTA.........................................................................................................23114.001411210
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGT.............................................................................................................20113.00137501
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAG..............................................................................................................18113.001312100
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGG...............................................................................................................18113.00134603
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGG........................................................................................................25111.001111000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT..................................................................................................................................................24111.00114601
droYak3
A-----------------------AGTTCAT-----------------------------------------------------------------------TTCGCCCCTGCGAC--GAACTGA-CGTTCCTCA------TCACTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGGAA------------AAG-----TG------------AAGCTGATGTCAAGCGGAAAAGTGATGT-TGCATAT-------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTT....................................................................................................................................................221803250.008032504626199907403141959359515151658512227
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTC....................................................................................................................................................22172243.00722436720721073225100000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT..........................................................................................................23371583.3321475037195264213660527275861915152573951887412
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGT.....................................................................................................................................................21130913.0030913255918832431545717328212440000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT...................................................................................................................................................2318319.0083195246472511798213440000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT...........................................................................................................2237005.672101723455805855216816047834023226112
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGC.....................................................................................................................................................2114684.0046841700450821210000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC..........................................................................................................2332283.0068493416678520470010
................................................................................................................................................................CCCTGTAGATCCGAATTTGTT....................................................................................................................................................2112093.00209316186419870170000
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT..........................................................................................................2231531.3345943414132716313890020
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT............................................................................................................2131356.674070276118896434491531335200510
...............................................................................................................................................................ACCCTGTAGATCCGAATTTG......................................................................................................................................................2011082.001082443324204101122680000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC...................................................................................................................................................231719.007192770431110000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTA....................................................................................................................................................221576.0057622453951050000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.............................................................................................................203407.6712234939211010103259050250
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA...................................................................................................................................................231381.003815164229821260000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTT......................................................................................................................................................201372.003720137000010000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGAC....................................................................................................................................................221288.002880028800000000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGG.....................................................................................................................................................211252.0025216208810010000
.................................................................................................................................................................CCTGTAGATCCGAATTTGTT....................................................................................................................................................201227.0022738013030290000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGGC....................................................................................................................................................221212.002120021200000000
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGT.....................................................................................................................................................221198.0019810717701030000
...............................................................................................................................................................ACCCTGTAGATCCGAATTT.......................................................................................................................................................191186.00186302312621220000
................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT...................................................................................................................................................221178.0017895110770040000
................................................................................................................................................................CCCTGTAGATCCGAATTTGT.....................................................................................................................................................201173.001738154900200000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC...........................................................................................................223171.6751529447010380000
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT...........................................................................................................213166.00498845912102160000
...............................................................................................................................................................ACCCTGTAGATCCGAATT........................................................................................................................................................181138.0013853374700100000
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGTT....................................................................................................................................................231134.001342259960110000
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT..........................................................................................................213113.00339025256003280000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTG....................................................................................................................................................221111.001117574410110000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG..............................................................................................................19396.3328926913371416710130
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG.........................................................................................................24177.00772538201110000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC............................................................................................................21368.6720615118210160000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGCC....................................................................................................................................................22166.0066006410010000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA.........................................................................................................24364.67194011535626290010
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG...................................................................................................................................................23157.00575222800020000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA..................................................................................................................................................24153.00532671200080000
..................................................................................................................................................................CTGTAGATCCGAATTTGTT....................................................................................................................................................19152.0052053571040000
.......................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT..........................................................................................................24350.3315114410030030000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG..........................................................................................................23348.6714651112601120000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT..................................................................................................................................................24140.0040023611000000
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGC.....................................................................................................................................................22137.0037003700000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC.........................................................................................................24334.3310318156312130000
............................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT..........................................................................................................19331.67950533900030000
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT............................................................................................................20330.6792281000090000
................................................................................................................................................................CCCTGTAGATCCGAATTTG......................................................................................................................................................19130.0030129000000000
droEre2
C-----------------------AGTTCAT-----------------------------------------------------------------------TTCGCCCCTCCGAC-----------GTTCCTCA------TCAGTTTGCTCTACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGGAA------------AAG-----TG------------AAGCTGATGTCAAGCGGAAAAGTGATTT-T---CAT-------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTT....................................................................................................................................................221238423.00238423489036282094810865102365125220
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT..........................................................................................................231130742.0013074275348188149151450266147469132
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGT.....................................................................................................................................................21118168.0018168416124781632949770122280
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT...........................................................................................................22116487.0016487701922422861494892188415
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT..........................................................................................................2216342.00634259264636307459
................................................................................................................................................................CCCTGTAGATCCGAATTTGTT....................................................................................................................................................2114621.0046214584140012110
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT...................................................................................................................................................2314585.0045851445472177722593132
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTC....................................................................................................................................................2214023.00402328391511059100
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT.........................................................................................................2413262.0032621286137293113284510
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT............................................................................................................2112492.002492879127602511092920
...............................................................................................................................................................ACCCTGTAGATCCGAATTTG......................................................................................................................................................2011587.001587627151678009527
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.............................................................................................................2011396.001396427122887311900
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC..........................................................................................................231719.00719345812012900
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT...........................................................................................................211606.006065314106190
................................................................................................................................................................CCCTGTAGATCCGAATTTGT.....................................................................................................................................................201379.00379376100020
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGC.....................................................................................................................................................211356.00356234801410
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA.........................................................................................................241348.003481861143121212
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG..............................................................................................................191345.00345111455190300
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA...................................................................................................................................................231323.00323905902159130
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT..........................................................................................................211321.0032129511101130
.................................................................................................................................................................CCTGTAGATCCGAATTTGTT....................................................................................................................................................201241.00241192121418140
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTA....................................................................................................................................................221158.001583586052840
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA..........................................................................................................231149.001496401017670
................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT...................................................................................................................................................221141.00141136102200
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT.........................................................................................................231138.001381130012220
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG..........................................................................................................231102.001024120006350
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG.........................................................................................................241101.00101810201440
...............................................................................................................................................................ACCCTGTAGATCCGAATTT.......................................................................................................................................................19191.00915321120140
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGA...............................................................................................................18186.00862781915260
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC.........................................................................................................24178.00784316111250
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC...........................................................................................................22178.007846900230
...........................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT..........................................................................................................20177.007759602910
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGG.....................................................................................................................................................21168.006857600410
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT............................................................................................................20167.006756100820
.......................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT..........................................................................................................24166.006644622930
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA..................................................................................................................................................24161.0061241003510
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC...................................................................................................................................................23159.00591722031250
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG...................................................................................................................................................23149.0049323011120
...............................................................................................................................................................ACCCTGTAGATCCGAATTTT......................................................................................................................................................20146.004632400820
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT..................................................................................................................................................24144.0044113012441
..............................................................................................................................................................TACCCTGTAGATCCGAATTTG......................................................................................................................................................21143.004300000043
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTG....................................................................................................................................................22142.004221517710
............................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT..........................................................................................................19141.004133600200
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGG.............................................................................................................19138.0038210001610
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG............................................................................................................21137.003730211300
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGTT....................................................................................................................................................23135.003532300000
................................................................................................................................................................CCCTGTAGATCCGAATTTG......................................................................................................................................................19134.003434000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA...........................................................................................................22133.0033160101240
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT...........................................................................................................20132.003230000200
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA........................................................................................................25130.003017000850
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGT.....................................................................................................................................................22130.003031011024
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTA.........................................................................................................23127.002722100400
..............................................................................................................................................................TACCCTGTAGATCCGAATTT.......................................................................................................................................................20127.002710000026
...............................................................................................................................................................ACCCTGTAGATCCGAATT........................................................................................................................................................18125.002584001120
...................................................................................................................................................................TGTAGATCCGAATTTGTT....................................................................................................................................................18125.002591001140
................................................................................................................................................................CCCTGTAGATCCGAATTTGTG....................................................................................................................................................21125.002525000000
..................................................................................................................................................................CTGTAGATCCGAATTTGTT....................................................................................................................................................19125.002516001440
.............................................................................................................................................................................................................TCGGTTCTAGAGAGGTTT..........................................................................................................18120.002020000000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGGC....................................................................................................................................................22119.001951400000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGG........................................................................................................25117.001717000000
dp5
C-----T----------------CGGCGCCC----------TCGGGCATGGCACCGGGCTCCACACCCCGTCCTCTGCAGGCAGTTTTTTTG----GTTCTC----------------------------------------AAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTACAACGAAA-ACAG-----------ATAG---TTATTA----------------AAGTGA-AAAGTGAT-----------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTT....................................................................................................................................................221206200.002062002076662428518149231807833241838516992026090
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT..........................................................................................................231149614.0014961470176579438454367326231501697014338559
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT...........................................................................................................22126194.0026194631143713865109034880446761911379
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGT.....................................................................................................................................................21115428.001542882168313172538463523160586171372
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTC....................................................................................................................................................22111179.00111796161069441323621000
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT..........................................................................................................2216521.00652126212121131712142002
................................................................................................................................................................CCCTGTAGATCCGAATTTGTT....................................................................................................................................................2116275.0062751561673658142100
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT............................................................................................................2115847.005847612996269114842331449910622
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.............................................................................................................2013705.0037051326005825267879533104
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT.........................................................................................................2413651.00365114153133810574901488425
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC..........................................................................................................2313630.00363012234131771511000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT...................................................................................................................................................2313018.003018251525730971543835139455
...............................................................................................................................................................ACCCTGTAGATCCGAATTTG......................................................................................................................................................2012404.002404751933367157612743128
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT...........................................................................................................2111183.00118301121743638022
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGC.....................................................................................................................................................211712.00712157572110133001
................................................................................................................................................................CCCTGTAGATCCGAATTTGT.....................................................................................................................................................201617.00617261100011002
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG..............................................................................................................191584.005841427731413111206
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC...........................................................................................................221389.003891531267004000
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT..........................................................................................................211384.003840368142000000
.................................................................................................................................................................CCTGTAGATCCGAATTTGTT....................................................................................................................................................201344.003442314111517012
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA...................................................................................................................................................231341.00341211451015152229120
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGT.....................................................................................................................................................221333.00333161031091224910121325
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA.........................................................................................................241302.00302119732310747005
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTA....................................................................................................................................................221279.0027911722814639001
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT............................................................................................................201254.00254024300019001
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGG.............................................................................................................191217.00217020800018000
................................................................................................................................................................CCCTGTAGATCCGAATTTG......................................................................................................................................................191186.00186018600000000
................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT...................................................................................................................................................221179.001790155103803000
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGTT....................................................................................................................................................231159.0015958837410311001
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC...................................................................................................................................................231157.001571291173104200
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT.........................................................................................................231152.001520131201018000
...............................................................................................................................................................ACCCTGTAGATCCGAATTT.......................................................................................................................................................191124.00124108283601608
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC............................................................................................................211107.00107297517013000
.............................................................................................................................................................................................................TCGGTTCTAGAGAGGTTT..........................................................................................................181106.0010609952000000
...............................................................................................................................................................ACCCTGTAGATCCGAATT........................................................................................................................................................181106.00106265860400417
............................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT..........................................................................................................19196.009608844000000
...........................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT..........................................................................................................20196.0096179101113000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG.........................................................................................................24188.008807230229000
.......................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT..........................................................................................................24185.0085063131007001
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC.........................................................................................................24183.0083223397514200
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGA...............................................................................................................18174.007405231752004
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA..........................................................................................................23166.0066041110247100
..............................................................................................................................................................TACCCTGTAGATCCGAATTTG......................................................................................................................................................21165.006534920315002
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGAC....................................................................................................................................................22160.006000600000000
..................................................................................................................................................................CTGTAGATCCGAATTTGTT....................................................................................................................................................19155.005504920202000
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT...........................................................................................................20155.005505400001000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG..........................................................................................................23153.005306414011000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG...................................................................................................................................................23150.005034030001003
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA...........................................................................................................22149.0049235010110000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA..................................................................................................................................................24143.0043102162102001
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT..................................................................................................................................................24140.004002752015000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGGC....................................................................................................................................................22135.003500341000000
...................................................................................................................................................................TGTAGATCCGAATTTGTT....................................................................................................................................................18131.003112310202002
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTG....................................................................................................................................................22128.002813701111013
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA........................................................................................................25127.0027012001310001
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGC.....................................................................................................................................................22127.002700242000100
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTA.........................................................................................................23124.002401830002001
.................................................................................................................................................................CCTGTAGATCCGAATTTGT.....................................................................................................................................................19123.002302200001000
............................................................................................................................................................................................................TTCGGTTCTAGAGAGGTT...........................................................................................................18123.002302110100000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGT.............................................................................................................20123.002301610015000
...........................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTT...........................................................................................................19122.002202110000000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGG.....................................................................................................................................................21122.002212160201000
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAG..............................................................................................................18122.002202100100000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA............................................................................................................21118.001801200012003
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTG.........................................................................................................23116.001601330000000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTT......................................................................................................................................................20113.00130471001000
droPer2
C-----T----------------CGGCGCCC----------TCGGGCTTGGCACCGGGCTCCACACCCCGTTCTCTGCAGGCAGTTTTTTTG----GTTCTC----------------------------------------AAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTACAACGAAA-ACAG-----------ATAG---TTATTAAAGTGAA---------AAGTGATAAAGTGC--------AAG-------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTT....................................................................................................................................................22154754.005475413316793529661022391225603
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT..........................................................................................................23129652.0029652591710002768158037447641
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT...........................................................................................................2216958.006958174217491134379391978
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGT.....................................................................................................................................................2115574.00557419976961041777611839
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT............................................................................................................2111868.0018683504042190265738
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.............................................................................................................2011019.0010191934862283541
................................................................................................................................................................CCCTGTAGATCCGAATTTGTT....................................................................................................................................................211879.0087912472911222
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT.........................................................................................................241869.00869461641350148448
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT..........................................................................................................221864.008645790892329
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT...................................................................................................................................................231711.00711101123301157389
...............................................................................................................................................................ACCCTGTAGATCCGAATTTG......................................................................................................................................................201522.0052219612582271100
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGT.....................................................................................................................................................221288.0028824310731015
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA...................................................................................................................................................231210.002101512012828
...............................................................................................................................................................ACCCTGTAGATCCGAATTT.......................................................................................................................................................191190.00190170123014
...............................................................................................................................................................ACCCTGTAGATCCGAATT........................................................................................................................................................181163.00163151101010
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG..............................................................................................................191158.001581058981459
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT...........................................................................................................211148.00148312902410
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGG.....................................................................................................................................................211119.0011911800010
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTC....................................................................................................................................................221106.0010673121299
................................................................................................................................................................CCCTGTAGATCCGAATTTGT.....................................................................................................................................................20190.009020680002
.................................................................................................................................................................CCTGTAGATCCGAATTTGTT....................................................................................................................................................20176.0076104812213
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGC.....................................................................................................................................................21167.00676500011
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA.........................................................................................................24162.0062123431417
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTG....................................................................................................................................................22159.005928241132
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC..........................................................................................................23152.00523222376
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT..........................................................................................................21145.00450440100
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGTT....................................................................................................................................................23142.004217111256
................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT...................................................................................................................................................22140.004022120114
..............................................................................................................................................................TACCCTGTAGATCCGAATTTG......................................................................................................................................................21139.00393150111
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGA...............................................................................................................18136.00367138143
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT............................................................................................................20136.00360330012
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC.........................................................................................................24135.00353120011
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA..................................................................................................................................................24134.00343210001
...................................................................................................................................................................TGTAGATCCGAATTTGTT....................................................................................................................................................18131.003115600010
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTA....................................................................................................................................................22130.00308130234
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGG.............................................................................................................19129.00290290000
..................................................................................................................................................................CTGTAGATCCGAATTTGTT....................................................................................................................................................19125.00255621110
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG............................................................................................................21121.00211800030
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC...........................................................................................................22120.00201610003
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG.........................................................................................................24120.00204130021
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC............................................................................................................21120.00201610012
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT.........................................................................................................23117.00170130031
...........................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT..........................................................................................................20116.0016291103
................................................................................................................................................................CCCTGTAGATCCGAATTTG......................................................................................................................................................19115.00151140000
.................................................................................................................................................................CCTGTAGATCCGAATTTGT.....................................................................................................................................................19114.0014840110
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG...................................................................................................................................................23114.0014480002
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGG.....................................................................................................................................................22114.00141400000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA..........................................................................................................23114.0014060035
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTG...........................................................................................................22113.0013460030
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA...........................................................................................................22112.0012050142
............................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT..........................................................................................................19111.00110100001
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG..........................................................................................................23111.0011710120
.......................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT..........................................................................................................2419.009410112
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGT.............................................................................................................2019.009420012
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT...........................................................................................................2018.008080000
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGG.............................................................................................................1817.007060001
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGC.....................................................................................................................................................2217.007600010
................................................................................................................................................................CCCTGTAGATCCGAATTT.......................................................................................................................................................1817.007610000
.............................................................................................................................................................................................................TCGGTTCTAGAGAGGTTT..........................................................................................................1816.006060000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA........................................................................................................2515.005020003
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC...................................................................................................................................................2314.004120010
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT..................................................................................................................................................2414.004100003
droWil2
T-----------------------A-------------------------------------------------------------------------------------------------------------C------TCGCTTTGTTCTACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTTTTTAAGGACAAATTCGGTTCTAGAGAGGTTTAAGTGGTTCAATGTTC------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTT....................................................................................................................................................221263241.0026324114990177121161319989419032
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT..........................................................................................................23181969.00819697722305456283342893130
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGT.....................................................................................................................................................21117650.001765075552050116653971482
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT...........................................................................................................22117478.00174786857462817223382889
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT............................................................................................................2114828.0048288301869949868312
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT...................................................................................................................................................2313374.0033741835942911854452
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT..........................................................................................................2212623.002623323534520814
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT.........................................................................................................2412395.002395130677485849254
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.............................................................................................................2012139.0021391461003529239222
...............................................................................................................................................................ACCCTGTAGATCCGAATTTG......................................................................................................................................................2011943.00194312983879211353
................................................................................................................................................................CCCTGTAGATCCGAATTTGTT....................................................................................................................................................2111671.0016713316012269
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG..............................................................................................................191499.00499142841106031
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA...................................................................................................................................................231397.00397155331018415
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT...........................................................................................................211356.00356830214248
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTC....................................................................................................................................................221348.0034811081718231
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGG.....................................................................................................................................................211323.003233210011
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGC.....................................................................................................................................................211295.0029527512143
...............................................................................................................................................................ACCCTGTAGATCCGAATTT.......................................................................................................................................................191207.00207862918110
................................................................................................................................................................CCCTGTAGATCCGAATTTGT.....................................................................................................................................................201204.002048192103
...............................................................................................................................................................ACCCTGTAGATCCGAATT........................................................................................................................................................181199.00199164130202
.....................................................................................................................................................................................TTATACTAGTTTTTAAGGA.................................................................................................................................191186.001860101823
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT............................................................................................................201169.001691152682
.................................................................................................................................................................CCTGTAGATCCGAATTTGTT....................................................................................................................................................201166.00166219573310
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT..........................................................................................................211157.0015711391160
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA.........................................................................................................241149.0014918512447
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC..........................................................................................................231125.001257889228
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC...................................................................................................................................................231124.00124442572424
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTCC..................................................................................................................................................241123.001231066407
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGA...............................................................................................................181111.001114574379
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTT........................................................................................................251103.00103130291627
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC.........................................................................................................24183.00835316653
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGG.............................................................................................................19180.0080074231
................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT...................................................................................................................................................22173.0073956161
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC...........................................................................................................22170.0070564415
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA..........................................................................................................23165.00652379143
............................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT..........................................................................................................19163.0063259101
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTA....................................................................................................................................................22161.00618533213
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA..................................................................................................................................................24160.0060399282
.............................................................................................................................................................................................................TCGGTTCTAGAGAGGTTT..........................................................................................................18159.0059059000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC............................................................................................................21159.0059443660
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT.........................................................................................................23157.0057047451
...................................................................................................................................................................TGTAGATCCGAATTTGTT....................................................................................................................................................18156.005618133211
...........................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT..........................................................................................................20155.0055145054
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG............................................................................................................21151.0051442311
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG...................................................................................................................................................23144.00442212271
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG.........................................................................................................24141.0041723380
................................................................................................................................................................CCCTGTAGATCCGAATTTG......................................................................................................................................................19140.0040039100
...............................................................................................................................................................ACCCTGTAGATCCGAATTTT......................................................................................................................................................20138.0038052292
..................................................................................................................................................................CTGTAGATCCGAATTTGTT....................................................................................................................................................19131.0031663124
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA...........................................................................................................22130.00304141011
.....................................................................................................................................................................................TTATACTAGTTTTTAAGGAA................................................................................................................................20129.0029000290
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAG..............................................................................................................18129.0029027101
.................................................................................................................................................................CCTGTAGATCCGAATTTGTTTT..................................................................................................................................................22128.0028200260
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTCCC.................................................................................................................................................25128.0028261001
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT..................................................................................................................................................24127.0027172143
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTCC........................................................................................................25126.00261401011
.................................................................................................................................................................CCTGTAGATCCGAATTTGTTT...................................................................................................................................................21125.0025341116
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTG....................................................................................................................................................22123.00231200110
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAT........................................................................................................25123.002331766
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT...........................................................................................................20122.0022021001
.......................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT..........................................................................................................24122.0022013270
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTTATACT.............................................................................................................................................29121.0021210000
.................................................................................................................................................................CCTGTAGATCCGAATTTGT.....................................................................................................................................................19121.0021109110
......................................................................................................................................................................................................GACAAATTCGGTTCTAGAGAGGT............................................................................................................23120.0020001172
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGTT....................................................................................................................................................23119.0019414010
............................................................................................................................................................................................................TTCGGTTCTAGAGAGGTT...........................................................................................................18116.0016115000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGT.............................................................................................................20116.0016411100
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTG...........................................................................................................22113.001372103
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA........................................................................................................25113.001314242
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTTT.......................................................................................................26113.001302641
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTA..................................................................................................................................................24112.001243131
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGT............................................................................................................19112.001209300
.......................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGT............................................................................................................22111.001102360
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAA..............................................................................................................19111.001104700
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTCC..........................................................................................................23110.001090001
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG..........................................................................................................23110.001043210
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTCA..................................................................................................................................................2419.00941103
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGG.............................................................................................................1819.00908010
...........................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTT...........................................................................................................1919.00908010
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA............................................................................................................2119.00907002
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTCCC.......................................................................................................2618.00820105
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGA.............................................................................................................2017.00702203
......................................................................................................................................................................................................GACAAATTCGGTTCTAGAGAGG.............................................................................................................2216.00601041
droVir3
G-----T---------TACACCTGTGTGTAT-------------------------------------------------------------------------------TGCCAC----------GCGTCT-A---GGTTTCACTTTGTTCCACGTCCACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTCTGTGGCTCATTGTCCAGCG--------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTT....................................................................................................................................................221419015.00419015825411817736409604953220921530624541601857218012546031349146393636220929555144654337145432132027353420725828715365495135450103612407044529111494901986581643710498193041813411558158291259410011761313524878418469563206041711924363466023106131675145676369060914599274748545934126
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT..........................................................................................................231110936.001109362610171018365222322335561918160100340312003916279119412009292242577934564523861964411673271632297164911217475373991155146159137327267292591349695504313439342364283445290722061418207581016514649539139179817345404912311196147
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGT.....................................................................................................................................................21137649.003764934609578971641244231522175710146125314032850525046115874821036955130325619112621146658122130139105305266304643565100097663410617441365103229457448209163218201234256711099642721941479553582448430424
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT...........................................................................................................22121220.002122018091398390923744448122810114302621002412361505189429751175719501732672262113544784161246405645549840114906979611671502766461843835540015251511127782217861631273161
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC...................................................................................................................................................23116889.0016889856661417032230060000101921514316291423332269131601900006148723188152333207195319494100010537408596844603706996056830103092222125603521768704991621327347
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT............................................................................................................21116683.001668340018946538131060247465000129412910816914711031222141721211643463161489411051014380113224589211622231022141331211721531373685873019202284289561373516418233245
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.............................................................................................................20115205.001520514062707423863515964800100221228033615322113149173803910415365020211101013220116610117317596305254131151830161317101633295668
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT...................................................................................................................................................2319659.009659172172428281217312613001703617263831373115122193172911150140063212311203315610420118114132023037438825430528532426938717472089511041222214710262923111328317305160149
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTC....................................................................................................................................................2213885.003885821263307052004100012102105520010440101000011330101446537815916926184710714230030116251755523311
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT.........................................................................................................2413157.00315731143413143123111300011065431823762155143501153735142123114510139000025447612568867113614150121802212105200213353
...............................................................................................................................................................ACCCTGTAGATCCGAATTTG......................................................................................................................................................2012657.002657801353339160610050000302618283931153374003039440100000025012151432687511419173289138197030102162054433251117433
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA...................................................................................................................................................2312328.00232871121920103000001060031704922030121002013411127845379081721341132101298310992362869395503200411811533230363618942311723
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT..........................................................................................................2212030.002030251550810300100000141241768012455005241524240010020000011111213022000621515005101001000001000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAGGA.................................................................................................................................4011784.0017840000000000000000000000000000000000000000044138111935911119937726643546627201766300000000000000000000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAGG..................................................................................................................................3911512.00151200000000000000000000000000000000000000002001188011986691756411094586354104440200000000000000000000
..............................................................................................................................................................CACCCTGTAGATCCGAATTTGTT....................................................................................................................................................2311405.001405104249600000010003201100142000003030000000114422235344279549747356655214203229015122000624150002578642224
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC..........................................................................................................2311302.0013022819199302100000002004001121000102000100000800195101148102316133844943312700000044140900010
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTCC..................................................................................................................................................2411056.00105629452313200000000000011013000022000700001500120144373256534142325540833710030000012974711141500210
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAGGAA................................................................................................................................411903.009030000000000000000000000000000000000000000011937261583163305241274030651228000000000000000000000
................................................................................................................................................................CCCTGTAGATCCGAATTTGTT....................................................................................................................................................211866.00866211719900000100000101010010000001000000000200222124537641243562620400010001000011220
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG..............................................................................................................191818.008188529910032001000018144565052020110710320110001132000000000000000021052228600410027032003013
..............................................................................................................................................................CACCCTGTAGATCCGAATTTGT.....................................................................................................................................................221700.007001988280010010000022021014000000000020000031127922231518214542254124101418166215000012224310231252013
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGG.............................................................................................................191654.006540060800000000001000000000000000000000000030000000000001000000223500100001000000000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA..................................................................................................................................................241538.005381714200100000001000000110001011102011200002513464961511689318280041800311914432714452212943271528
...............................................................................................................................................................ACCCTGTAGATCCGAATT........................................................................................................................................................181520.0052078202030210000000111211012000000100010000001137353210910731052019267630000000019412827301411000
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT............................................................................................................201476.004760042020100000000100120000000000100000000040000010000100101000043600000000000000000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGC.....................................................................................................................................................211447.00447147501231001011000001010000100000000000000001000000010000100100301300000000000001000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGG.....................................................................................................................................................211433.0043332267130000000000000000001000000000010000000100000000202213541500100000001000001000
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT...........................................................................................................211397.0039700323120000000000100323011000100000000000010000000010000100011004400000010000000000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTCA..................................................................................................................................................241386.003869031102000000000100001020110020000001032231328202713135838831733030006221611251226224101543
.................................................................................................................................................................CCTGTAGATCCGAATTTGTT....................................................................................................................................................201356.00356823290000010000102100001000000000000000051114591162222157713810513020500201004800001210
...............................................................................................................................................................ACCCTGTAGATCCGAATTT.......................................................................................................................................................191259.002594827133000000000043305204310000021000000000010000100000000119302200001019241524171400033
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTG....................................................................................................................................................221249.00249143040000012000000000000000000000010000030002134354411597843797035000000010000091043
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTA....................................................................................................................................................221244.0024472462000000000000001001100001000002100003010306824172164652433114000241005010373212
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC.........................................................................................................241234.0023410794806000000001000111111001012020100000401032125698877911302670800000002153200000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC...........................................................................................................221209.00209341641262000000000000100002100000110010000000000000000000000100001100000011400100010
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC............................................................................................................211203.00203251271281000000000100010010000000000000000010000000000000000000081800000000000000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA.........................................................................................................241201.002011157100000000000633872049100101302030130040000000011000201001465200002000000001000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGA...............................................................................................................181180.00180135530110000000352521015210010712030000080000000000020002010924011062461411410015
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT..........................................................................................................211143.001430010917000000000010100000100010100000000001000000000100000220210200000000000100000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA...........................................................................................................221132.00132623800020000000000212011300310000010000010000000000000000111025000023100020120002
...................................................................................................................................................................TGTAGATCCGAATTTGTT....................................................................................................................................................181121.00121121200003170000001000000100000000030000080121354360421424021600200000202300112054
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG...................................................................................................................................................231116.00116153970020000000001020000100000100000000010011025191721522021710200000016120200100
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTCC...................................................................................................................................................231109.00109150230000000000000000001100000000010000020000101001102021181612000000000101528300000
................................................................................................................................................................CCCTGTAGATCCGAATTTGT.....................................................................................................................................................20193.009352770000000000000101000100000000000000000000000000000100010200000000000200000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG............................................................................................................21192.009237201230000000000000000000000000000000000010000000000000001100101600000000000000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG.........................................................................................................24189.0089723630000000000521201007000000100000000030000000100000000000231102000000000000000
..................................................................................................................................................................CTGTAGATCCGAATTTGTT....................................................................................................................................................19188.008842821010010000100121011100000100010000013000012101013112180940200000000200010222
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAG...................................................................................................................................38188.008800000000000000000000000000000000000000000001936770683840102500000000000000000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA..........................................................................................................23187.0087101930000000000202421032100011110000000030000010000000000000003800000010000000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG..........................................................................................................23181.00819512230000000000000100013100000010000100010000001100100000112221200000000000000000
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT.........................................................................................................23181.0081002960000000000300002042000100001010000030000100000000000000112501000000000000000
..............................................................................................................................................................CACCCTGTAGATCCGAATTTGTTC...................................................................................................................................................24170.0070000100000000000000000000000000000000000000002021011462132023000000000000001010100
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTCCC.................................................................................................................................................25169.006960100000000000000000000300000001000000000000000000013001298000000000621106900000
............................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT..........................................................................................................19169.0069124040000000000100010000000000100000000020000100000000001100000110200000000010000
...........................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT..........................................................................................................20165.006500345000010000011002002610000011000000100000000000010000120000112100000000000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTC........................................................................................................25160.006020070000000000000000001000001000000000000007201053440011111410200000010100000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA............................................................................................................21151.0051301900000000000000000000000000000000000020000100000010000010012000000030000000000
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGG.............................................................................................................18145.004500440000000000000000000000000001000000000000000000000000000000000000000000000000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTA..................................................................................................................................................24144.004420100000000000000000001000000000100000000011101120110200101000600020002001004110
...............................................................................................................................................................ACCCTGTAGATCCGAAT.........................................................................................................................................................17143.0043000000000000000000000000000000000000000000001000100010011153700000010200000000010
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAGGAG................................................................................................................................41141.004100000000000000000000000000000000000000000001134252431010001400000000000000000000
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTC..................................................................................................................................................24139.003900040000000000000000000100000200000000000000020003222221111200000000000001000100
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTCC.................................................................................................................................................25136.003610010000000000000000000000000000000000000001100011111124031500000000000011000000
.............................................................................................................................................................................................................TCGGTTCTAGAGAGGTTT..........................................................................................................18136.003600332000000000000000000000000000000000000000000000000000000000010000000000000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAG................................................................................................................17132.00320000000000000000000000000000000000000000100101101111002667300000000000000000000
................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT...................................................................................................................................................22129.002910230000000000000000000000000000000000000000000000000210001100000000000000000000
................................................................................................................................................................CCCTGTAGATCCGAATTTG......................................................................................................................................................19129.002900290000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................CACCCTGTAGATCCGAATTTG......................................................................................................................................................21127.00279141000000000010000000100000000000000000001000001010020000000200000000000000210
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT...........................................................................................................20127.002700251000000000000000000000000000000000000000000000000000100000000000000000000000
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTAA..........................................................................................................23124.002400101000000000100000000000100000000000000000000000000000000011000032000001010002
droMoj3
A-----------------------CATTAAT----ATGCAT-------------------------------------------------------------ATAAATATGAATG--------CA--TGTCT-A---AGTTCCACTCTGTTCCACGTCTACCCTGTAGATCCGAATTTGTTGTACCATAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTATGTGGCTCATTGTCCAGCG--------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTT....................................................................................................................................................221438052.004380522879814157705128037000323109
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT..........................................................................................................231323963.00323963709582759975193223011717222
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTC....................................................................................................................................................22132440.0032440107111832127186
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT...........................................................................................................22125263.00252636731213220433147842882
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGT.....................................................................................................................................................21118452.00184522799342227407129621715
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC..........................................................................................................2319935.00993533624986921
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT............................................................................................................2119328.00932839824119337713703365
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT...................................................................................................................................................2318847.00884776930922457073629
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT..........................................................................................................2216883.0068835710225101018118
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.............................................................................................................2015866.0058662579311313581782589
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT.........................................................................................................2415425.00542593017556903217957
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC...................................................................................................................................................2314179.0041799642118192524633
................................................................................................................................................................CCCTGTAGATCCGAATTTGTT....................................................................................................................................................2112843.00284326379011942
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGC.....................................................................................................................................................2112280.002280300222723
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGT.....................................................................................................................................................2211906.0019068750710170745
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC...........................................................................................................221784.007842001272536
...............................................................................................................................................................ACCCTGTAGATCCGAATTTG......................................................................................................................................................201692.00692371102036124131
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT...........................................................................................................211625.006255340335431
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA...................................................................................................................................................231574.005748282444830
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC.........................................................................................................241474.00474147245212104
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT..........................................................................................................211471.004713050001597
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA.........................................................................................................241420.0042012063624243
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTA....................................................................................................................................................221403.00403102003829
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGC.....................................................................................................................................................221335.0033500003350
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT............................................................................................................201327.0032730901449
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG..............................................................................................................191325.00325164211187123
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTC..................................................................................................................................................241244.002441050117364
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGG.............................................................................................................191237.00237213011121
................................................................................................................................................................CCCTGTAGATCCGAATTTGT.....................................................................................................................................................201220.0022021400060
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG..........................................................................................................231215.0021591111967
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC............................................................................................................211206.0020670001972
.................................................................................................................................................................CCTGTAGATCCGAATTTGTT....................................................................................................................................................201199.00199107200837
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGTT....................................................................................................................................................231186.00186387011355
...............................................................................................................................................................ACCCTGTAGATCCGAATTTT......................................................................................................................................................201175.0017530001702
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTCC..................................................................................................................................................241139.00139422322070
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT.........................................................................................................231134.00134730104614
............................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT..........................................................................................................191126.0012658100661
.......................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT..........................................................................................................241123.0012368200503
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGAC....................................................................................................................................................221120.0012001001190
...........................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT..........................................................................................................201117.0011754201591
...............................................................................................................................................................ACCCTGTAGATCCGAATTT.......................................................................................................................................................191106.0010636052630
.............................................................................................................................................................................................................TCGGTTCTAGAGAGGTTT..........................................................................................................181103.0010340000630
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG.........................................................................................................24197.009764116196
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGGC....................................................................................................................................................22193.00930000930
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA..........................................................................................................23193.0093380123418
................................................................................................................................................................CCCTGTAGATCCGAATTTGTTC...................................................................................................................................................22177.00777600010
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGA...............................................................................................................18174.007446365122
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA...........................................................................................................22169.006929024925
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTCA..................................................................................................................................................24168.006826101337
................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT...................................................................................................................................................22168.00686600020
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTA.........................................................................................................23163.006330001293
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG...................................................................................................................................................23162.006215100433
...............................................................................................................................................................ACCCTGTAGATCCGAATT........................................................................................................................................................18157.005718000390
..................................................................................................................................................................CTGTAGATCCGAATTTGTT....................................................................................................................................................19145.004516630137
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTC..........................................................................................................22142.00422000400
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA..................................................................................................................................................24140.0040131001511
..............................................................................................................................................................TACCCTGTAGATCCGAATTTG......................................................................................................................................................21140.004013212211
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGG.....................................................................................................................................................21137.00370100360
................................................................................................................................................................CCCTGTAGATCCGAATTTGTC....................................................................................................................................................21137.003713000240
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT...........................................................................................................20136.003623000121
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGTC....................................................................................................................................................23136.00364000293
droGri2
A-----T------------------A---------------------------------TATATATATATATATATACATATAGTTTATATATACTGTTTT-----------------------------------------CACTTTGTTCCACGTCTACCCTGTAGATCCGAATTTGTTGTACACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGCTCAATGCCCACCGAAA-TGAG--TA---AAGAAT----------------------------AGTGA-ATAGTGAA-----------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT..........................................................................................................23110470.001047065503920
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTT....................................................................................................................................................2214022.00402221041918
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT...........................................................................................................221893.00893493400
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT..........................................................................................................221585.0058556124
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT.........................................................................................................241334.00334118216
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT............................................................................................................211298.00298126172
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGT.....................................................................................................................................................211260.0026016991
................................................................................................................................................................CCCTGTAGATCCGAATTTGTT....................................................................................................................................................211191.001911910
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTT...................................................................................................................................................231116.001166947
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.............................................................................................................20189.00894049
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT...........................................................................................................21156.0056533
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA.........................................................................................................24132.00321715
...............................................................................................................................................................ACCCTGTAGATCCGAATTTG......................................................................................................................................................20129.00291910
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT..........................................................................................................21129.0029290
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC..........................................................................................................23127.0027126
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG..........................................................................................................23126.0026224
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA..........................................................................................................23123.0023122
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGA...............................................................................................................18120.0020200
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG.........................................................................................................24118.0018153
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT.........................................................................................................23117.0017116
................................................................................................................................................................CCCTGTAGATCCGAATTTGT.....................................................................................................................................................20117.0017170
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAG..............................................................................................................19114.0014113
.................................................................................................................................................................CCTGTAGATCCGAATTTGTT....................................................................................................................................................20112.0012120
...........................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT..........................................................................................................20112.0012120
............................................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT..........................................................................................................19111.0011101
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC.........................................................................................................2419.00990
.......................................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT..........................................................................................................2419.00990
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTG...................................................................................................................................................2319.00990
.............................................................................................................................................................................................................TCGGTTCTAGAGAGGTTT..........................................................................................................1818.00880
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTA...................................................................................................................................................2318.00853
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGG.............................................................................................................1917.00770
................................................................................................................................................................CCCTGTAGATCCGAATTTGTTT...................................................................................................................................................2217.00770
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT............................................................................................................2016.00660
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT...........................................................................................................2013.00330
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAAA.......................................................................................................2613.00312
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA...........................................................................................................2213.00312
...............................................................................................................................................................ACCCTGTAGATCCGAATTT.......................................................................................................................................................1913.00330
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGGC.......................................................................................................2612.00220
...............................................................................................................................................................ACCCTGTAGATCCGAATT........................................................................................................................................................1812.00220
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA..................................................................................................................................................2412.00220
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAG..............................................................................................................1812.00220
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGG.............................................................................................................1812.00220
..............................................................................................................................................................TACCCTGTAGATCCGAATTTGTT....................................................................................................................................................2312.00220
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTGG..................................................................................................................................................2412.00220
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTAT.........................................................................................................2412.00202
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA............................................................................................................2112.00220
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGGCC......................................................................................................2712.00220
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGC........................................................................................................2512.00220
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA........................................................................................................2512.00211
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTC...................................................................................................................................................2312.00211
.................................................................................................................................................................CCTGTAGATCCGAATTTGT.....................................................................................................................................................1912.00220
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGG........................................................................................................2512.00220
............................................................................................................................................................................................................TTCGGTTCTAGAGAGGTT...........................................................................................................1811.00110
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTTT.........................................................................................................2211.00110
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTAG..................................................................................................................................................2411.00110
.........................................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTGTT.......................................................................................................2511.00110
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGGCA......................................................................................................2711.00110
.....................................................................................................................................................................................GTACACTAGCT-TTAAGGAA................................................................................................................................1911.00110
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTTCT.................................................................................................................................................2511.00110
..............................................................................................................................................................................................................CGGTTCTAGAGAGGTTTA.........................................................................................................1811.00110
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC............................................................................................................2111.00101
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTA........................................................................................................2511.00110
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTTGTA.................................................................................................................................................2511.00101
........................................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAG........................................................................................................2511.00110
..........................................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTTGT........................................................................................................2311.00101
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGA.....................................................................................................................................................2111.00101
..................................................................................................................................................................CTGTAGATCCGAATTTGTTT...................................................................................................................................................2011.00101
................................................................................................................................................................CCCTGTAGATCCGAATTTG......................................................................................................................................................1911.00110
..................................................................................................................................................................CTGTAGATCCGAATTTGTT....................................................................................................................................................1911.00110
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTATG..................................................................................................................................................2411.00110
...........................................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTTT.........................................................................................................2111.00110
................................................................................................................................................................CCCTGTAGATCCGAATTT.......................................................................................................................................................1811.00110
.............................................................................................................................................................................................................TCGGTTCTAGAGAGGTTTG.........................................................................................................1911.00110
...............................................................................................................................................................ACCCTGTAGATCCGAATTTGTC....................................................................................................................................................2211.00110
................................................................................................................................................................CCCTGTAGATCCGAATTTGTTG...................................................................................................................................................2211.00110

Generated: 10/20/2015 at 10:16 PM