ID:

dan-let-7

 Coordinate:

scaffold_12916:2379181-2379258 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.8

Flybase annnotation

pre_miRNA [Dana\let-7-RM]; miRNA [Dana\let-7-RA]

No Repeatable elements found

Sense Strand Reads

TCACGACCTAACCACCCAGCAAAAAGGACTACACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGCAACTAAGAATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCATTTGATTTGAAAATCCCCCCCCAATGGAGTTCTATGTG

*********************************************.....((.((((((..(((.(((((.(((((((((((..............))))))))))).))))).)))..)))))).)).......******************************************* 		Read size # Mismatch Hit Count Total Norm Total M044

female body

 V106

head

 V105

male body		 V055

head

 M058

embryo

 V039

embryo
............................................................TGAGGTAGTAGGTTGTATAGT................................................................................................. 21 0 1 194721.00 194721 79135 49293 45428 20833 25 7
............................................................TGAGGTAGTAGGTTGTATAG.................................................................................................. 20 0 1 82378.00 82378 45353 14769 12710 9532 6 8
............................................................TGAGGTAGTAGGTTGTATAGTA................................................................................................ 22 0 1 41037.00 41037 20099 9962 7801 3169 4 2
............................................................TGAGGTAGTAGGTTGTATAGTT................................................................................................ 22 1 1 10511.00 10511 6297 1464 1909 841 0 0
............................................................TGAGGTAGTAGGTTGTATAGTAA............................................................................................... 23 1 1 5088.00 5088 1228 2281 1302 267 3 7
.............................................................GAGGTAGTAGGTTGTATAGT................................................................................................. 20 0 1 5008.00 5008 4663 106 150 27 61 1
............................................................TGAGGTAGTAGGTTGTATA................................................................................................... 19 0 1 4344.00 4344 1712 1129 1081 422 0 0
............................................................TGAGGTAGTAGGTTGTAT.................................................................................................... 18 0 1 3561.00 3561 2020 664 109 768 0 0
............................................................TGAGGTAGGAGGTTGTATAGT................................................................................................. 21 1 1 3418.00 3418 3272 8 11 127 0 0
............................................................TGAGGTAGTAGGTTGTATAGA................................................................................................. 21 1 1 3310.00 3310 807 1008 1235 260 0 0
............................................................TGAGGTAGTAGGTTGTATT................................................................................................... 19 1 1 3101.00 3101 1790 369 641 300 1 0
.............................................................GAGGTAGTAGGTTGTATAG.................................................................................................. 19 0 1 2684.00 2684 2625 21 27 10 1 0
............................................................TGAGGTAGGAGGTTGTATAG.................................................................................................. 20 1 1 1926.00 1926 1863 3 6 54 0 0
............................................................TGAGGTAGTAGGTTGTATAGTAT............................................................................................... 23 1 1 1869.00 1869 778 530 446 115 0 0
............................................................TGAGGTAGAAGGTTGTATAGT................................................................................................. 21 1 1 1521.00 1521 1430 14 29 48 0 0
.............................................................GAGGTAGTAGGTTGTATAGTA................................................................................................ 21 0 1 1477.00 1477 1350 46 74 7 0 0
............................................................TGAGGTAGTAGGTTGTATAGTTT............................................................................................... 23 2 1 1253.00 1253 826 120 235 72 0 0
............................................................TGAGGGAGTAGGTTGTATAGT................................................................................................. 21 1 1 953.00 953 42 74 102 735 0 0
............................................................TGAGGTAGCAGGTTGTATAGT................................................................................................. 21 1 1 851.00 851 657 62 63 68 1 0
............................................................TGAGGTAGAAGGTTGTATAG.................................................................................................. 20 1 1 828.00 828 791 3 14 20 0 0
............................................................TGAGGTAGGAGGTTGTATAGTA................................................................................................ 22 1 1 773.00 773 739 2 7 25 0 0
............................................................TGAGGTAGTAGGTTGTATAA.................................................................................................. 20 1 1 759.00 759 161 335 185 77 0 1
............................................................TGAGGTAGTAGGTTGTATAT.................................................................................................. 20 1 1 758.00 758 168 291 209 90 0 0
..................................................................................................CTATACAATGTGCTAGCTTTCT.......................................................... 22 0 1 667.00 667 302 337 14 14 0 0
............................................................TTAGGTAGTAGGTTGTATAGT................................................................................................. 21 1 1 647.00 647 54 350 227 7 9 0
............................................................TGAGGTAGTAGGTTGTATAGC................................................................................................. 21 1 1 570.00 570 43 171 250 100 6 0
............................................................TGGGGTAGTAGGTTGTATAGT................................................................................................. 21 1 1 523.00 523 48 350 61 64 0 0
............................................................TGAGGCAGTAGGTTGTATAGT................................................................................................. 21 1 1 520.00 520 36 78 63 343 0 0
............................................................TGAGGTAGTAGGTTGTATAGTAC............................................................................................... 23 1 1 519.00 519 158 228 106 27 0 0
............................................................TGAGGTAGCAGGTTGTATAG.................................................................................................. 20 1 1 489.00 489 411 23 21 34 0 0
............................................................TGAGGTAGTAGGTTGTATAGTAAA.............................................................................................. 24 2 1 434.00 434 86 212 110 15 5 6
............................................................TGAGGTAGTAGGCTGTATAGT................................................................................................. 21 1 1 418.00 418 45 89 187 97 0 0
............................................................TGAGGTAGTAGTTTGTATAGT................................................................................................. 21 1 1 416.00 416 118 104 184 10 0 0
............................................................TGAGGGAGTAGGTTGTATAG.................................................................................................. 20 1 1 411.00 411 19 28 36 328 0 0
............................................................TGAGGTAGTATGTTGTATAGT................................................................................................. 21 1 1 401.00 401 43 202 146 10 0 0
.............................................................GAGGTAGTAGGTTGTATAGTT................................................................................................ 21 1 1 380.00 380 366 6 5 3 0 0
............................................................TGAGGTAGTAGGTTGTATATT................................................................................................. 21 1 1 356.00 356 50 77 71 158 0 0
............................................................TGAGGTAGAAGGTTGTATAGTA................................................................................................ 22 1 1 350.00 350 330 4 4 12 0 0
............................................................TGATGTAGTAGGTTGTATAGT................................................................................................. 21 1 1 333.00 333 54 179 86 13 1 0
............................................................TGAGGTAGTAGGTTGTATAGG................................................................................................. 21 1 1 324.00 324 35 50 180 59 0 0
..............................................................AGGTAGTAGGTTGTATAGT................................................................................................. 19 0 1 300.00 300 249 6 8 0 37 0
............................................................TGAGGTAGTAGGATGTATAGT................................................................................................. 21 1 1 299.00 299 16 33 215 35 0 0
............................................................TGAGGTAGTAGATTGTATAGT................................................................................................. 21 1 1 283.00 283 7 17 252 7 0 0
............................................................TGAGGTAGTAGGTTGCATAGT................................................................................................. 21 1 1 281.00 281 24 61 143 53 0 0
............................................................GGAGGTAGTAGGTTGTATAGT................................................................................................. 21 1 1 274.00 274 223 10 21 20 0 0
............................................................TGAGGTAGGAGGTTGTATAGTT................................................................................................ 22 2 1 256.00 256 249 1 1 5 0 0
............................................................TGAGGTAGTAGGGTGTATAGT................................................................................................. 21 1 1 255.00 255 37 40 72 106 0 0
............................................................TGAGGAAGTAGGTTGTATAGT................................................................................................. 21 1 1 251.00 251 13 14 43 181 0 0
............................................................TGAGGTAGTAGGTTGTATAGTG................................................................................................ 22 1 1 238.00 238 102 81 26 29 0 0
............................................................TGAGGCAGTAGGTTGTATAG.................................................................................................. 20 1 1 229.00 229 20 26 23 160 0 0
............................................................TGAGGTAGTAGGTTGTGTAGT................................................................................................. 21 1 1 215.00 215 22 79 41 73 0 0
.............................................................GAGGTAGTGGGTTGTATAGT................................................................................................. 20 1 1 210.00 210 210 0 0 0 0 0
............................................................TGAGGTAGTAGCTTGTATAGT................................................................................................. 21 1 1 206.00 206 6 13 170 17 0 0
............................................................TGGGGTAGTAGGTTGTATAG.................................................................................................. 20 1 1 200.00 200 29 120 20 30 0 1
............................................................TGAGGTAGCAGGTTGTATAGTA................................................................................................ 22 1 1 194.00 194 160 15 10 9 0 0
............................................................TGAGGTGGTAGGTTGTATAGT................................................................................................. 21 1 1 187.00 187 27 67 47 46 0 0
............................................................TTAGGTAGTAGGTTGTATAG.................................................................................................. 20 1 1 185.00 185 27 101 48 8 1 0
............................................................TGAGGTATTAGGTTGTATAGT................................................................................................. 21 1 1 183.00 183 42 64 64 13 0 0
............................................................TGAGGTAGTAGGTTGTATAGAA................................................................................................ 22 1 1 176.00 176 17 81 69 8 0 1
............................................................TGAGGTAGTAGGCTGTATAG.................................................................................................. 20 1 1 173.00 173 35 24 66 48 0 0
...........................................................CTGAGGTAGTAGGTTGTATAGT................................................................................................. 22 1 1 172.00 172 111 16 29 16 0 0
............................................................TGAGGTAGTAAGTTGTATAGT................................................................................................. 21 1 1 170.00 170 7 17 139 7 0 0
............................................................TGAGGTAGTAGGTTTTATAGT................................................................................................. 21 1 1 169.00 169 26 68 41 33 0 1
..............................................................AGGTAGTAGGTTGTATAG.................................................................................................. 18 0 1 167.00 167 158 4 2 3 0 0
............................................................TGAGGTAGTAGGTCGTATAGT................................................................................................. 21 1 1 161.00 161 27 46 71 17 0 0
............................................................TGAGGGAGTAGGTTGTATAGTA................................................................................................ 22 1 1 160.00 160 10 21 25 104 0 0
............................................................CGAGGTAGTAGGTTGTATAGT................................................................................................. 21 1 1 157.00 157 60 48 27 22 0 0
............................................................TGAGGTAGTGGGTTGTATAGT................................................................................................. 21 1 1 157.00 157 36 47 24 50 0 0
............................................................TAAGGTAGTAGGTTGTATAGT................................................................................................. 21 1 1 156.00 156 13 21 109 13 0 0
............................................................TGAGGTAGTACGTTGTATAGT................................................................................................. 21 1 1 154.00 154 31 26 87 10 0 0
............................................................TGAGGTAGTAGGTTGTATAGTC................................................................................................ 22 1 1 152.00 152 46 37 31 38 0 0
............................................................TGAGGTAGTAGGTTGTATTT.................................................................................................. 20 2 8 149.88 1199 668 114 290 127 0 0
............................................................TGAGGTAGTAGGTTGAATAGT................................................................................................. 21 1 1 149.00 149 5 3 119 22 0 0
............................................................GGAGGTAGTAGGTTGTATAG.................................................................................................. 20 1 1 149.00 149 135 2 5 7 0 0
............................................................TTAGGTAGTAGGTTGTATAGTA................................................................................................ 22 1 1 146.00 146 26 65 53 2 0 0
............................................................TGAGGTAGTAGGTTGTATGGT................................................................................................. 21 1 1 145.00 145 28 50 25 42 0 0
..................................................................................................CTATACAATGTGCTAGCTTTC........................................................... 21 0 1 141.00 141 69 65 3 4 0 0
............................................................TGAGGTAGTAGTTTGTATAG.................................................................................................. 20 1 1 136.00 136 55 28 44 9 0 0
............................................................TGAGGTAGTATGTTGTATAG.................................................................................................. 20 1 1 130.00 130 29 55 34 11 0 1
............................................................TGAGGTAGTAGGTTGTACAGT................................................................................................. 21 1 1 125.00 125 25 57 26 17 0 0
............................................................TGAGGTAGTAGGTTGTCTAGT................................................................................................. 21 1 1 123.00 123 0 7 17 99 0 0
............................................................TGAGGAAGTAGGTTGTATAG.................................................................................................. 20 1 1 121.00 121 14 4 9 94 0 0
.............................................................GAGGTAGTAGGTTGTATA................................................................................................... 18 0 1 120.00 120 117 0 3 0 0 0
............................................................TGAGGTAGTAGATTGTATAG.................................................................................................. 20 1 1 111.00 111 3 9 94 5 0 0
.............................................................GAGGTAGTAGGTTGTATAGTAA............................................................................................... 22 1 1 110.00 110 85 11 13 1 0 0
............................................................TGAGGTAGTAGGTTGCATAG.................................................................................................. 20 1 1 104.00 104 19 18 42 25 0 0
............................................................TGAGGTAGTAGGTTGTATAGTAG............................................................................................... 23 0 1 103.00 103 51 32 11 9 0 0
............................................................TGAGGTAGTAGGTTCTATAGT................................................................................................. 21 1 1 102.00 102 25 32 30 15 0 0
............................................................TGAGGTAGTATGTTGTATAGTA................................................................................................ 22 1 1 102.00 102 5 70 24 3 0 0
............................................................TCAGGTAGTAGGTTGTATAGT................................................................................................. 21 1 1 102.00 102 17 18 58 9 0 0
...............................................................GGTAGTAGGTTGTATAGT................................................................................................. 18 0 1 102.00 102 68 5 8 6 15 0
.............................................................GAGGTAGTAGGTTGTATT................................................................................................... 18 1 1 102.00 102 100 1 1 0 0 0
............................................................TGACGTAGTAGGTTGTATAGT................................................................................................. 21 1 1 100.00 100 36 19 40 5 0 0
............................................................TGAGGTAGTAGGTTGTATAGCA................................................................................................ 22 1 1 99.00 99 3 31 49 16 0 0
............................................................TGCGGTAGTAGGTTGTATAGT................................................................................................. 21 1 1 99.00 99 3 23 40 33 0 0
............................................................TGAGGTACTAGGTTGTATAGT................................................................................................. 21 1 1 96.00 96 20 32 36 8 0 0
............................................................TGAGTTAGTAGGTTGTATAGT................................................................................................. 21 1 1 95.00 95 22 47 23 3 0 0
............................................................TGAGGTAGAAGGTTGTATAGTT................................................................................................ 22 2 1 93.00 93 90 0 1 2 0 0
..............................................................AGGTAGTAGGTTGTATAGTA................................................................................................ 20 0 1 92.00 92 87 3 2 0 0 0
............................................................AGAGGTAGTAGGTTGTATAGT................................................................................................. 21 1 1 92.00 92 60 4 16 12 0 0
............................................................TGAGGTAGTAGGGTGTATAG.................................................................................................. 20 1 1 91.00 91 18 4 25 44 0 0
............................................................TGAGGTAGTAGGCTGTATAGTA................................................................................................ 22 1 1 90.00 90 10 21 39 19 0 1
............................................................TGAGGTAGTAGGATGTATAG.................................................................................................. 20 1 1 89.00 89 7 4 55 23 0 0
............................................................TGAGGTAGTAGGTTGTATAGTTA............................................................................................... 23 2 1 88.00 88 27 29 28 4 0 0
............................................................TGAGGTAGTAGGTTGGATAGT................................................................................................. 21 1 1 87.00 87 2 1 34 50 0 0
............................................................TGAAGTAGTAGGTTGTATAGT................................................................................................. 21 1 1 86.00 86 13 14 48 11 0 0
...........................................................CTGAGGTAGTAGGTTGTATAG.................................................................................................. 21 1 1 83.00 83 61 3 9 10 0 0
............................................................TGAGGTAGTAGGTTGTATACT................................................................................................. 21 1 1 82.00 82 13 20 18 30 1 0
............................................................TGAGGTAGTAGGTTGTTTAGT................................................................................................. 21 1 1 82.00 82 4 11 3 64 0 0
............................................................TGAGGTAGTAGGTTGTATTA.................................................................................................. 20 2 1 80.00 80 34 14 24 8 0 0
............................................................TGGGGTAGTAGGTTGTATAGTA................................................................................................ 22 1 1 80.00 80 12 52 8 8 0 0
............................................................TGAGGTGGTAGGTTGTATAG.................................................................................................. 20 1 1 79.00 79 16 19 20 24 0 0
............................................................TGAGGCAGTAGGTTGTATAGTA................................................................................................ 22 1 1 78.00 78 13 8 10 47 0 0
............................................................TGAGGTAGTAGTTTGTATAGTA................................................................................................ 22 1 1 77.00 77 18 23 32 4 0 0
............................................................TGAGGTAGTAGGTTGTATATTA................................................................................................ 22 1 1 75.00 75 17 35 12 11 0 0
............................................................TGAGGTAGTAGGTTGTATCGT................................................................................................. 21 1 1 75.00 75 3 9 16 47 0 0
............................................................TGAGATAGTAGGTTGTATAGT................................................................................................. 21 1 1 74.00 74 3 32 25 14 0 0
............................................................TGAGGTAGTAGGTTATATAGT................................................................................................. 21 1 1 72.00 72 7 22 29 13 0 1
...........................................................TTGAGGTAGTAGGTTGTATAGT................................................................................................. 22 0 1 71.00 71 69 0 1 0 1 0
............................................................TGAGGGAGGAGGTTGTATAGT................................................................................................. 21 2 1 71.00 71 0 0 2 69 0 0
............................................................TGAGGTAGTAGGTTGTATAAA................................................................................................. 21 2 1 70.00 70 11 37 21 1 0 0
............................................................TGAGGTAGTAGGTTGTTT.................................................................................................... 18 1 1 70.00 70 26 12 5 27 0 0
............................................................TGATGTAGTAGGTTGTATAGTA................................................................................................ 22 1 1 69.00 69 15 32 20 2 0 0
............................................................TGAGGTAGTAGGTTGTATGG.................................................................................................. 20 1 1 68.00 68 23 13 7 25 0 0
............................................................TGAGGTCGTAGGTTGTATAGT................................................................................................. 21 1 1 64.00 64 2 12 29 21 0 0
............................................................CGAGGTAGTAGGTTGTATAG.................................................................................................. 20 1 1 64.00 64 31 15 6 12 0 0
............................................................TGAGGTAGTAGGTCGTATAG.................................................................................................. 20 1 1 64.00 64 14 14 20 16 0 0
............................................................TGAGGTATTAGGTTGTATAG.................................................................................................. 20 1 1 63.00 63 24 22 13 4 0 0
.............................................................GAGGTAGTAGGTTGTATAGA................................................................................................. 20 1 1 63.00 63 59 2 1 1 0 0
............................................................TGAGGTAGTAGCTTGTATAG.................................................................................................. 20 1 1 60.00 60 5 7 35 13 0 0
............................................................TGAGGTAGTAGGTTTTATAG.................................................................................................. 20 1 1 60.00 60 14 17 13 16 0 0
............................................................TGTGGTAGTAGGTTGTATAGT................................................................................................. 21 1 1 60.00 60 7 17 12 24 0 0
............................................................TGAGGTAGTAGGTAGTATAGT................................................................................................. 21 1 1 59.00 59 2 1 54 2 0 0
............................................................TGAGGTAGTAGATTGTATAGTA................................................................................................ 22 1 1 59.00 59 0 7 51 1 0 0
............................................................GGAGGTAGTAGGTTGTATAGTA................................................................................................ 22 1 1 59.00 59 47 8 2 2 0 0
............................................................TGAGGTAGTAAGTTGTATAG.................................................................................................. 20 1 1 58.00 58 4 12 35 7 0 0
............................................................TAAGGTAGTAGGTTGTATAG.................................................................................................. 20 1 1 57.00 57 6 12 29 10 0 0
............................................................TGAGGTAGCAGGTTGTATAGTT................................................................................................ 22 2 1 56.00 56 50 2 4 0 0 0
.............................................................GAGGTAGTAGGTTGTATAGTAT............................................................................................... 22 1 1 56.00 56 50 3 3 0 0 0
............................................................TGAGGTAGTAGGATGTATAGTA................................................................................................ 22 1 1 56.00 56 6 13 31 6 0 0
............................................................TGAGGTAGTAGGTTGTGTAG.................................................................................................. 20 1 1 56.00 56 11 17 9 19 0 0
............................................................TGATGTAGTAGGTTGTATAG.................................................................................................. 20 1 2 55.00 110 37 52 16 5 0 0
............................................................TGAGGTAGTAGGTTGTATAC.................................................................................................. 20 1 1 55.00 55 15 15 8 16 0 1
............................................................TGAGGGAGTAGGTTGTATAGTT................................................................................................ 22 2 1 55.00 55 6 5 3 41 0 0
...........................................................GTGAGGTAGTAGGTTGTATAGT................................................................................................. 22 1 1 54.00 54 54 0 0 0 0 0
............................................................TGAGGTAGTGGGTTGTATAG.................................................................................................. 20 1 1 54.00 54 14 12 8 20 0 0
............................................................TGAGGTAGTAGGTTCTATAG.................................................................................................. 20 1 1 53.00 53 18 12 11 12 0 0
............................................................TGAGGTAGTAGGTTGAATAG.................................................................................................. 20 1 1 51.00 51 3 1 43 4 0 0
............................................................TGAGGTAGTTGGTTGTATAGT................................................................................................. 21 1 1 51.00 51 6 16 5 24 0 0
............................................................TGAGGTAGTAGGTTGCATAGTA................................................................................................ 22 1 1 50.00 50 10 11 21 8 0 0
............................................................TGAGGTAGGAGGTTGTATAGTAA............................................................................................... 23 2 1 50.00 50 48 1 0 1 0 0
............................................................TGAGGTTGTAGGTTGTATAGT................................................................................................. 21 1 1 50.00 50 6 8 11 25 0 0
............................................................TGAGGTAGTAGGTTGTATTGT................................................................................................. 21 1 1 50.00 50 13 11 7 19 0 0
............................................................TGAGGAAGTAGGTTGTATAGTA................................................................................................ 22 1 1 49.00 49 7 3 9 30 0 0
............................................................TGAGGTAGTAGGTTGTATAAT................................................................................................. 21 1 1 49.00 49 13 18 8 10 0 0
............................................................TGAGGTAGTAGGTTGTATAGGA................................................................................................ 22 1 1 48.00 48 3 11 31 3 0 0
............................................................TGAGGTAGTAGGTTGTATAGTATT.............................................................................................. 24 2 1 48.00 48 23 11 10 4 0 0
.............................................................GAGGTAGTGGGTTGTATAGTA................................................................................................ 21 1 1 47.00 47 47 0 0 0 0 0
............................................................TGAGGTAGTAGGGTGTATAGTA................................................................................................ 22 1 1 46.00 46 12 6 10 18 0 0
............................................................AGAGGTAGTAGGTTGTATAG.................................................................................................. 20 1 1 46.00 46 35 1 3 7 0 0
............................................................TGAGGTACTAGGTTGTATAG.................................................................................................. 20 1 1 45.00 45 17 11 11 6 0 0
............................................................TGCGGTAGTAGGTTGTATAG.................................................................................................. 20 1 1 45.00 45 2 3 16 24 0 0
............................................................TGAGGTAGTACGTTGTATAG.................................................................................................. 20 1 1 45.00 45 11 9 19 6 0 0
............................................................TGAGGTAGTAGGTTGTATTG.................................................................................................. 20 1 1 45.00 45 15 5 6 19 0 0
............................................................TGAGGTAGGAGGTTGTATAGA................................................................................................. 21 2 1 44.00 44 37 0 5 2 0 0
............................................................TGAGGTAGTAGGTTGTACAG.................................................................................................. 20 1 1 44.00 44 9 8 8 19 0 0
............................................................TGAGGTAATAGGTTGTATAGT................................................................................................. 21 1 1 43.00 43 2 13 18 10 0 0
............................................................TGAGGTAGTAGGTTGTATCG.................................................................................................. 20 1 1 43.00 43 1 4 5 33 0 0
............................................................TGAGGTAGTAGGTTGTTTT................................................................................................... 19 2 3 41.00 123 33 27 39 24 0 0
............................................................TGAGGTAGGAGGGTGTATAGT................................................................................................. 21 2 1 41.00 41 35 0 0 6 0 0
............................................................TGAGGTAGTAGGTTGTATAGAT................................................................................................ 22 2 1 41.00 41 6 5 29 1 0 0
.............................................................GAGGTAGTTGGTTGTATAGT................................................................................................. 20 1 1 41.00 41 40 0 0 1 0 0
...........................................................ATGAGGTAGTAGGTTGTATAGT................................................................................................. 22 1 1 41.00 41 41 0 0 0 0 0
............................................................TGACGTAGTAGGTTGTATAG.................................................................................................. 20 1 1 39.00 39 21 2 12 4 0 0
............................................................TGAGGTAGTAGCTTGTATAGTA................................................................................................ 22 1 1 39.00 39 2 4 30 3 0 0
............................................................TGAGGTAGTAGGTGGTATAGT................................................................................................. 21 1 1 39.00 39 3 4 26 6 0 0
............................................................TGAGCTAGTAGGTTGTATAGT................................................................................................. 21 1 1 39.00 39 9 10 12 8 0 0
............................................................TGAGGCAGGAGGTTGTATAGT................................................................................................. 21 2 1 38.00 38 0 0 0 38 0 0
............................................................TGAGGTAGTAGGTTGTATGGTA................................................................................................ 22 1 1 38.00 38 6 13 6 13 0 0
............................................................TGAGGTAGTCGGTTGTATAGT................................................................................................. 21 1 1 38.00 38 1 9 5 23 0 0
.............................................................GAGGTAGTCGGTTGTATAGT................................................................................................. 20 1 1 37.00 37 35 0 1 1 0 0
............................................................TGAGGTAGTACGTTGTATAGTA................................................................................................ 22 1 1 37.00 37 4 10 19 4 0 0
............................................................TGAAGTAGTAGGTTGTATAG.................................................................................................. 20 1 1 37.00 37 8 7 15 7 0 0
............................................................TGAGGTAGTAGGTTGTAA.................................................................................................... 18 1 1 37.00 37 15 6 1 15 0 0
............................................................TGAGGTAGTAGGTTGTA..................................................................................................... 17 0 1 36.00 36 0 0 0 36 0 0
............................................................TGAGGTAGTAGGTTGGATAG.................................................................................................. 20 1 1 36.00 36 0 0 11 25 0 0
............................................................TGAGGTAGTAGGTTATATAG.................................................................................................. 20 1 1 36.00 36 9 8 9 10 0 0
............................................................TGAGGTAGTAAGTTGTATAGTA................................................................................................ 22 1 1 36.00 36 5 8 19 4 0 0
............................................................TGAGGTAGTAGGTTGTATG................................................................................................... 19 1 1 36.00 36 12 7 6 11 0 0
.............................................................TAGGTAGTAGGTTGTATAGT................................................................................................. 20 1 1 36.00 36 20 9 6 0 1 0
............................................................TGAGGTAGTGGGTTGTATAGTA................................................................................................ 22 1 1 35.00 35 4 15 7 9 0 0
............................................................TGAGGTAGTAGGTCGTATAGTA................................................................................................ 22 1 1 34.00 34 4 15 14 1 0 0
............................................................TGAGGTAGGAGGTTGTATAGTAT............................................................................................... 23 2 1 34.00 34 33 0 0 1 0 0
............................................................TGAGTTAGTAGGTTGTATAG.................................................................................................. 20 1 1 34.00 34 12 7 11 4 0 0
...........................................................CTGAGGTAGTAGGTTGTATAGTA................................................................................................ 23 1 1 34.00 34 25 1 4 4 0 0
............................................................TGGGGGAGTAGGTTGTATAGT................................................................................................. 21 2 1 34.00 34 0 1 0 33 0 0
............................................................TGAGGTAGTAGGTTGTAGAG.................................................................................................. 20 1 1 34.00 34 0 0 1 33 0 0
...............................................................TGTAGTAGGTTGTATAGT................................................................................................. 18 1 2 33.50 67 18 30 17 0 2 0
............................................................TGAGGTAGTAGGTTGTCTAG.................................................................................................. 20 1 1 33.00 33 1 0 5 27 0 0
............................................................TGAGGTAGTAGGTTGTGTAGTA................................................................................................ 22 1 1 32.00 32 5 14 9 4 0 0
............................................................TGAGGTAGTAGGTTGTATAGTTC............................................................................................... 23 2 1 32.00 32 13 12 6 1 0 0
............................................................TAAGGTAGTAGGTTGTATAGTA................................................................................................ 22 1 1 32.00 32 1 6 22 3 0 0
............................................................TGAGGTAGTAGGTTGTAG.................................................................................................... 18 1 1 32.00 32 11 9 5 7 0 0
............................................................TGAGGGAGTAGGTTGTAT.................................................................................................... 18 1 1 32.00 32 1 1 0 30 0 0
............................................................TGAGGTAGTAGGCTGTATAGTT................................................................................................ 22 2 1 32.00 32 7 6 16 3 0 0
............................................................TGAGGTAGTAGGTTGTATAGTAAC.............................................................................................. 24 1 1 31.00 31 10 9 7 5 0 0
............................................................CGAGGTAGTAGGTTGTATAGTA................................................................................................ 22 1 1 31.00 31 14 8 4 5 0 0
............................................................TGAGGTAGTAGGTTTTATAGTA................................................................................................ 22 1 1 31.00 31 4 17 3 7 0 0
...........................................................GTGAGGTAGTAGGTTGTATAG.................................................................................................. 21 1 1 31.00 31 31 0 0 0 0 0
............................................................TGAGGTAGTAGGTTGTATAGTAAT.............................................................................................. 24 2 1 30.00 30 8 10 11 1 0 0
............................................................TGAGGGAGGAGGTTGTATAG.................................................................................................. 20 2 1 29.00 29 0 0 0 29 0 0
............................................................TGAGGTAGTAGGTTGTATATTT................................................................................................ 22 2 1 29.00 29 8 11 5 5 0 0
............................................................TGAGGTAGTAGTTTGTATAGTT................................................................................................ 22 2 1 29.00 29 8 6 12 3 0 0
............................................................TGAGGTATTAGGTTGTATAGTA................................................................................................ 22 1 1 29.00 29 14 8 6 1 0 0
...........................................................TTGAGGTAGTAGGTTGTATAG.................................................................................................. 21 0 1 29.00 29 29 0 0 0 0 0
............................................................TGAGGGAGTAGGTTGTTTAGT................................................................................................. 21 2 1 29.00 29 0 0 0 29 0 0
............................................................TTAGGTAGTAGGTTGTATAGTAA............................................................................................... 23 2 1 28.00 28 1 20 5 0 2 0
............................................................TGAGGTAGTAGGTTGTTTAG.................................................................................................. 20 1 1 28.00 28 11 0 2 15 0 0
............................................................TGAGGTAGTAGGTTGTAGAGT................................................................................................. 21 1 1 28.00 28 1 3 9 15 0 0
............................................................TGAGGTAGAAGGTTGTATAGA................................................................................................. 21 2 1 28.00 28 22 0 4 2 0 0
............................................................TGAGGTAGAAGGTTGTATAGTAA............................................................................................... 23 2 1 28.00 28 26 0 2 0 0 0
............................................................TCAGGTAGTAGGTTGTATAGTA................................................................................................ 22 1 1 27.00 27 4 6 16 1 0 0
............................................................TGAGGGAGTAGGTTGTATATT................................................................................................. 21 2 1 27.00 27 0 1 0 26 0 0
............................................................TGAGGCAGTAGGGTGTATAGT................................................................................................. 21 2 1 27.00 27 0 0 0 27 0 0
............................................................TGAGGTAGTAGGTTGTATAGCAA............................................................................................... 23 2 1 27.00 27 0 11 15 1 0 0
............................................................TGAGGTAGTAGGTTGTAAA................................................................................................... 19 1 1 27.00 27 10 5 5 7 0 0
............................................................TGAGGTAGTAGGTTGTATAGTTAA.............................................................................................. 24 3 1 26.00 26 6 15 4 1 0 0
............................................................TGAGGTAGGAGGGTGTATAG.................................................................................................. 20 2 1 25.00 25 21 0 0 4 0 0
............................................................TGAGGTAGTCGGTTGTATAG.................................................................................................. 20 1 1 25.00 25 0 2 3 20 0 0
...........................................................ATGAGGTAGTAGGTTGTATAG.................................................................................................. 21 1 1 25.00 25 25 0 0 0 0 0
............................................................TGAGGCAGTAGGTTGTAT.................................................................................................... 18 1 1 25.00 25 0 2 1 22 0 0
............................................................TGAGGCAGTAGGTTGTATATT................................................................................................. 21 2 1 25.00 25 0 0 0 25 0 0
............................................................TGAGGTAGGAGGTTGTATAGTTT............................................................................................... 23 3 1 25.00 25 24 0 0 1 0 0
............................................................TCAGGTAGTAGGTTGTATAG.................................................................................................. 20 1 1 24.00 24 4 6 14 0 0 0
............................................................TGAGGGAGTGGGTTGTATAGT................................................................................................. 21 2 1 24.00 24 0 0 0 24 0 0
............................................................TGAGGGAGTAGGTTGTAGAG.................................................................................................. 20 2 1 24.00 24 0 0 0 24 0 0
............................................................TGAGGGAGTAGGGTGTATAGT................................................................................................. 21 2 1 24.00 24 1 0 0 23 0 0
............................................................TGACGTAGTAGGTTGTATAGTA................................................................................................ 22 1 1 23.00 23 8 7 7 1 0 0
............................................................TGAGGTAGTAGGTTGTATAGCT................................................................................................ 22 2 1 23.00 23 1 7 12 3 0 0
............................................................TGAGGTAGTAGGTAGTATAG.................................................................................................. 20 1 1 23.00 23 3 1 17 2 0 0
............................................................TGAGGTAGTAGGATGTATAGTT................................................................................................ 22 2 1 23.00 23 2 3 16 2 0 0
............................................................TGAGGGAGTAGGTTGTATAGTAA............................................................................................... 23 2 1 23.00 23 0 4 5 14 0 0
............................................................TGAGGTAGTATGTTGTATAGTT................................................................................................ 22 2 1 23.00 23 4 11 5 3 0 0
............................................................TGAGGGAGTAGGTTGTATA................................................................................................... 19 1 1 23.00 23 2 4 4 13 0 0
............................................................TGAGGTGGTAGGTTGTATAGTA................................................................................................ 22 1 1 23.00 23 7 8 4 4 0 0
............................................................TGAGGTAGTAGGTTGTATAGAAA............................................................................................... 23 2 1 23.00 23 3 12 8 0 0 0
............................................................TGAGGTAGTAGGTTGTATAGTAAAA............................................................................................. 25 2 1 22.00 22 5 12 4 1 0 0
............................................................TGAGGTAGTAGGTTGTATACTA................................................................................................ 22 1 1 22.00 22 11 5 1 5 0 0
............................................................TGAGGTAGTAGGTTGAATAGTA................................................................................................ 22 1 1 22.00 22 1 0 21 0 0 0
............................................................TGAAGTAGTAGGTTGTATAGTA................................................................................................ 22 1 1 21.00 21 6 5 9 1 0 0
............................................................TGAGGTAGTAGGTTGTAGT................................................................................................... 19 2 2 21.00 42 6 19 12 5 0 0
............................................................TGAGGTAGTAGGTGGTATAG.................................................................................................. 20 1 1 21.00 21 3 1 12 5 0 0
..............................................................AGGTAGTAGGTTGTATAGTT................................................................................................ 20 1 1 21.00 21 19 0 0 2 0 0
............................................................TTAGGTAGTAGGTTGTATAGTT................................................................................................ 22 2 1 21.00 21 2 9 10 0 0 0
............................................................TGAGGTCGTAGGTTGTATAG.................................................................................................. 20 1 1 21.00 21 0 6 8 7 0 0
............................................................TGAGGTAGTAGGTTATAG.................................................................................................... 18 2 4 21.00 84 38 30 16 0 0 0
............................................................TGAGGTAGCAGGTTGTATAGA................................................................................................. 21 2 1 21.00 21 8 0 11 2 0 0
.............................................................GAGGTAGTAGGTTGTATAGTTT............................................................................................... 22 2 3 20.67 62 58 1 3 0 0 0
...........................................................GTGAGGTAGTAGGTTGTATAGTA................................................................................................ 23 1 1 20.00 20 20 0 0 0 0 0
.............................................................TAGGTAGTAGGTTGTATAGTA................................................................................................ 21 1 1 20.00 20 11 4 5 0 0 0
.............................................................GAGGTAGTAGGTTGTATAGC................................................................................................. 20 1 1 20.00 20 3 0 0 0 17 0
............................................................TGAGGTAGTAGGTTGTCTAGTA................................................................................................ 22 1 1 20.00 20 0 2 5 13 0 0
............................................................TGAGGGAGCAGGTTGTATAGT................................................................................................. 21 2 1 20.00 20 0 1 1 18 0 0
..................................................................................................CTATACAAGGTGCTAGCTTTCT.......................................................... 22 1 1 19.00 19 19 0 0 0 0 0
............................................................TGAGGCAGTAGGTTGTATAGTT................................................................................................ 22 2 1 19.00 19 0 2 6 11 0 0
............................................................TGAGGTAGTTGGTTGTATAG.................................................................................................. 20 1 1 19.00 19 2 3 3 11 0 0
...............................................................GGTAGTAGGTTGTATAGTA................................................................................................ 19 0 1 19.00 19 14 0 1 4 0 0
............................................................TGGGGTAGTAGGTTGTATAGTT................................................................................................ 22 2 1 19.00 19 3 4 5 7 0 0
............................................................TGAGGTAGTAGGTTGTAAAG.................................................................................................. 20 1 1 19.00 19 8 1 5 5 0 0
.............................................................GAGGTAGTGGGTTGTATAGTT................................................................................................ 21 2 1 19.00 19 19 0 0 0 0 0
............................................................TGAGGTAGTAGGTTGTATC................................................................................................... 19 1 1 19.00 19 4 7 5 3 0 0
............................................................TGAGTTAGTAGGTTGTATAGTA................................................................................................ 22 1 1 19.00 19 4 8 6 1 0 0
............................................................TGATGTAGTAGGTTGTATAGTT................................................................................................ 22 2 1 19.00 19 6 8 4 1 0 0
............................................................TGAGGTAGTAGGTTGTTTAGTA................................................................................................ 22 1 1 18.00 18 1 5 1 11 0 0
............................................................TGAGGGAGAAGGTTGTATAGT................................................................................................. 21 2 1 18.00 18 0 1 0 17 0 0
............................................................TGAGGTAATAGGTTGTATAG.................................................................................................. 20 1 1 18.00 18 8 6 1 3 0 0
...................................................................................................TATACAATGTGCTAGCTTTCT.......................................................... 21 0 1 18.00 18 11 7 0 0 0 0
............................................................TGAGGTAGTAGGTTGTATAGTGT............................................................................................... 23 2 1 18.00 18 10 4 4 0 0 0
............................................................TGAGGCAGTAGGTTGTATAGG................................................................................................. 21 2 1 18.00 18 0 1 1 16 0 0
............................................................TGAGGTAGTAGGTTGTATAGTTTT.............................................................................................. 24 3 3 18.00 54 43 3 6 2 0 0
............................................................TGAGGTAGTAGGTTGTATCT.................................................................................................. 20 2 1 18.00 18 3 7 6 2 0 0
............................................................AGAGGTAGTAGGTTGTATAGTA................................................................................................ 22 1 1 18.00 18 15 1 2 0 0 0
..........................................................TCTGAGGTAGTAGGTTGTATAGT................................................................................................. 23 2 1 18.00 18 1 4 11 2 0 0
............................................................TGAGGGAGTAGGTTGTGTAGT................................................................................................. 21 2 1 18.00 18 0 0 0 18 0 0
............................................................TGAGGTAGTAGGTTGTATTTT................................................................................................. 21 2 8 17.25 138 82 14 30 12 0 0
............................................................TGAGGGAGTAGGTTGTATAGC................................................................................................. 21 2 1 17.00 17 0 2 0 15 0 0
............................................................TGAGGTACTAGGTTGTATAGTA................................................................................................ 22 1 1 17.00 17 4 7 5 1 0 0
..............................................................TGGTAGTAGGTTGTATAGT................................................................................................. 19 1 1 17.00 17 9 3 5 0 0 0
...........................................................TTGAGGTAGTAGGTTGTATAGTA................................................................................................ 23 0 1 17.00 17 17 0 0 0 0 0
............................................................TGAGGTAGGAGGTTGTATAA.................................................................................................. 20 2 1 17.00 17 14 0 1 2 0 0
............................................................TGAGGTAGTAGGTTGTACAGTA................................................................................................ 22 1 1 16.00 16 1 10 2 3 0 0
............................................................TGAGGTTGTAGGTTGTATAG.................................................................................................. 20 1 1 16.00 16 2 0 2 12 0 0
............................................................TGATGTAGTAGGTTGTATAGTAA............................................................................................... 23 2 1 16.00 16 2 14 0 0 0 0
............................................................TGAGGTAGCAAGTTGTATAGT................................................................................................. 21 2 1 16.00 16 1 0 15 0 0 0
............................................................TGAGGTAGAAGGGTGTATAGT................................................................................................. 21 2 1 16.00 16 12 0 0 4 0 0
............................................................TGAGGGAGTAGGTTGGATAGT................................................................................................. 21 2 1 16.00 16 0 0 0 16 0 0
............................................................TGAGGGAGTAGGTTGTATAGG................................................................................................. 21 2 1 16.00 16 0 0 0 16 0 0
............................................................TGAGATAGTAGGTTGTATAG.................................................................................................. 20 1 1 15.00 15 2 7 2 4 0 0
............................................................TGTGGTAGTAGGTTGTATAGTA................................................................................................ 22 1 1 15.00 15 1 4 6 4 0 0
............................................................TGAGGCAGTAGGTTGTATAGTAA............................................................................................... 23 2 1 15.00 15 1 6 3 5 0 0
............................................................TGAGGAAGTAGGTTGTATAGC................................................................................................. 21 2 1 15.00 15 0 0 1 14 0 0

Anti-sense strand reads

AGTGCTGGATTGGTGGGTCGTTTTTCCTGATGTGGTTCCTGGAAAAAGAGAGACCGTTTAACTCCATCATCCAACATATCATCGTTGATTCTTAGCATGATATGTTACACGATCGAAAGAAACGAACTGTTATTCGGCGTAAACTAAACTTTTAGGGGGGGGTTACCTCAAGATACAC

*******************************************.....((.((((((..(((.(((((.(((((((((((..............))))))))))).))))).)))..)))))).)).......********************************************* 		Read size # Mismatch Hit Count Total Norm Total V055

head

 M058

embryo

 M044

female body
.GTGCTCGATTGGTGGGGCGAT............................................................................................................................................................ 21 3 1 1.00 1 1 0 0
...GCTGGATTGGGGGGTCGGT............................................................................................................................................................ 19 2 2 0.50 1 1 0 0
..CGCTCGATTGGTGGGACGTT............................................................................................................................................................ 20 3 2 0.50 1 1 0 0
.TTGCTCGATTGGTGGGACGTT............................................................................................................................................................ 21 3 3 0.33 1 1 0 0
..TGCTCGATTGGTGGGTCGGT............................................................................................................................................................ 20 2 4 0.25 1 1 0 0
..TGCTAGATTGGTGAGACGTT............................................................................................................................................................ 20 3 5 0.20 1 1 0 0
..TGCTGGATTGGAGGGACGGT............................................................................................................................................................ 20 3 8 0.13 1 1 0 0
.......................................................................................................................................................TTAGGGGGGGGTTACTTCT........ 19 2 9 0.11 1 0 1 0
..TGGTGGATTGGAGGGGCGTT............................................................................................................................................................ 20 3 9 0.11 1 1 0 0
..TGCTCGATTGGTGGGGCGGT............................................................................................................................................................ 20 3 10 0.10 1 1 0 0
..TGGTGGATTGGTGCGACGTT............................................................................................................................................................ 20 3 12 0.08 1 1 0 0
.CTGCTGAACTGGTGGGTCG.............................................................................................................................................................. 19 3 19 0.05 1 0 0 1
...................................................................................................................................................GCTGTTAGGGGGGGGT............... 16 2 20 0.05 1 1 0 0
...GCTTGATTGGTGGGACGGT............................................................................................................................................................ 19 3 20 0.05 1 1 0 0
..TGTTCGATTGGTGTGTCGTT............................................................................................................................................................ 20 3 20 0.05 1 1 0 0
...GCTGGATTGGTGAGACGGT............................................................................................................................................................ 19 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_12916:2379131-2379308 + dan-let-7 Known_mirbase -TCAC--GACCTAAC----CACCCAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGCAACTAAG-AATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCA--TTTGAT-T----------------------------------------------------------------TG--A----------------------AAATCCCCCCCCAATGGAGTTC-----T-----A---T---GTG
droBip1 scf7180000396430:324821-325008 + -TCAC--GACCTAAC----CACCCAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGCAACTAAG-AATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCA--TTTGAT-T----------------------------------------------------------------TCAAA----------------------TATT----CCCCAATGGAGTTC-TACATAAATATGTAT---GTG
droKik1 scf7180000302401:71717-71883 - -TTAATTTACCAAAAAATCCACCCAGCAAAAGGGACTA-AACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA-ATTTAAT-C----------------------------------------------------------------CA--A----------------------GAAA---CCACCA-------------------------------
droFic1 scf7180000454059:475749-475920 - -TAAA--AACCAAAC----CACCCAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--ATTGAT-T----------------------------------------------------------------AA--A-----------------------ACT-----CCCAATCGAACTTCACCGC----------------
droEle1 scf7180000491338:2439440-2439625 + -TTAA--AACCAAACCA-CCACCCAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACT-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--ATTGCT-T----------------------------------------------------------------TA--A-----------------------ACT-----CCCTATCGATCTGCACCAT-----CAACATAATCC
droRho1 scf7180000780227:12573-12758 + -TAAA--AACCAAACCA-CCACCCAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--ATTGAT-T----------------------------------------------------------------AA--A-----------------------ACT-----CCCAATCGAAGTGCACCAC-----CAACAGAACCC
droBia1 scf7180000302422:5215507-5215677 - -TAAA--CACCAAAC----CACCCAGCAAAAAGGACT--CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCACA--ATTGAT-T----------------------------------------------------------------TA--A-----------------------ACT-----CCCAATC-AGCTGCACCAC-----C----------
droTak1 scf7180000415867:746898-747079 + -TAAA--AACCAAAA----TACCCAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--ATTGAT-T----------------------------------------------------------------AA--A-----------------------ACT-----CCCAATCGAATTGCACAAC-----CAACTCAA-CC
droEug1 scf7180000409447:414614-414785 + -TAAA--AACCAAAC----CACCCAGCAAAAAGGACTA-CACT-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTATTAGCCGCA--ATTGAT-T----------------------------------------------------------------TA--A-----------------------ACT-----CCCAATCGAACTGCACCGC----------------
dm3 chr2L:18471984-18472161 + dme-let-7 Known_mirbase -TAAA--TACCAAAC----CACCTAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--TTTGAT-A----------------------------------------------------------------AA--A----------------------GAAT-----CCCAATCGAACTGCACCAC-----TTAAT------
droSim2 2l:18033000-18033177 + dsi-let-7 Known_mirbase -TAAA--AACCAAAC----CACCTAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--TTTGAT-T----------------------------------------------------------------AA--A----------------------GAAC-----CCCAATCGAACTGCACCAC-----TTACT------
droSec2 scaffold_7:2097932-2098109 + dse-let-7 Known_mirbase -TAAA--AACCAAAC----CACCTAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--TTTGAT-T----------------------------------------------------------------AA--A----------------------GAAC-----CCCAATCGAACTGCACCAC-----TTACT------
droYak3 2R:4988794-4988966 + dya-let-7 Known_mirbase -------------AC----CTCCTAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--TTTGAT-T----------------------------------------------------------------AA--A----------------------GAAT-----CCCAATCGAACCGCACCAC-----TTACTCCA-CT
droEre2 scaffold_4845:5799361-5799543 - der-let-7 Known_mirbase -TAAA--AACCAAAC----CACCTAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--TTTGAT-T----------------------------------------------------------------AA--A----------------------GAAT-----CCCAATCGAACTGCACCAC-----TTGCTCCA-CC
dp5 4_group3:3635614-3635811 + dps-let-7 Known_mirbase -TAAG----------------CCCAACAAAAAGGACCAGCACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTACTT-CA-GATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCTCA--TTTGAA-CAGCCCAGCCCCCCGCCCCAAACAGCT-----------CCCGTACGCCCCCCCCCAGCTACGAACAA--A----------------------G------------------------------------T---GTG
droPer2 scaffold_1:5116193-5116401 + dpe-let-7-1 Known_mirbase -TAAG----------------CCCAACAAAAAGGACCAGCACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTACTT-CA-GATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCTCA--TTTGAA-CAGCCCAGCCCCCCGCCCCGAACAGCTCCCGTACAGCTCCCGTACGCCCCCCCCCAGCTCCGAACAA--A----------------------G------------------------------------T---GTG
droWil2 scf2_1100000004521:11623117-11623253 + dwi-let-7 Known_mirbase -------------------------GCAAAAAGGACTA-CTTAAAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTATTCAATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCACAGATATGAT-C----------------------------------------------------------------TAA-A------------------------------------------------------------------
droVir3 scaffold_12963:18451321-18451460 + dvi-let-7 Known_mirbase --------------------------CAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTATTTATA-GAGCATACTATACAGCGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCA--AAGAAAAC----------------------------------------------------------------CA--A---------------------------CCCCCCCA-------------------------------
droMoj3 scaffold_6500:6184568-6184704 - dmo-let-7 Known_mirbase ACATA--AACCAA--------GCAAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTACTTATA-GACCATACTATACAGCGTGCTAGCTTTCTTTGCTTGACTATAAGCCGCA-------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_3792:106-285 + dgr-let-7-1 Known_mirbase ------------AAC----CAGCAAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTATCTATC-TAGCATACTATACAGCTTGCTAGCTTTCTTTGCTTGACTATAAGCAGCA--TAGAA--C----------------------------------------------------------------GA--AACCCTCTCACACACTGAAAAAAAAA------------------ACACCAC-----TGAAT---CTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
-TCAC--GACCTAAC----CACCCAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGCAACTAAG-AATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCA--TTTGAT-T----------------------------------------------------------------TG--A----------------------AAATCCCCCCCCAATGGAGTTC-----T-----A---T---GTGSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.....................................................................TGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................211194721.0019472179135257208334542849293
.....................................................................TGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................20182378.0082378453536895321271014769
.....................................................................TGAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................22141037.00410372009942316978019962
.....................................................................TGAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................22110511.001051162970084119091464
.....................................................................TGAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................2315088.00508812283726713022281
......................................................................GAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................2015008.005008466361127150106
.....................................................................TGAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................1914344.00434417120042210811129
.....................................................................TGAGGTAGTAGGTTGTAT................................................................................................................................................................................................................1813561.003561202000768109664
.....................................................................TGAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................2113310.0033108070026012351008
.....................................................................TGAGGTAGTAGGTTGTATT...............................................................................................................................................................................................................1913101.003101179010300641369
......................................................................GAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................1912684.002684262510102721
.....................................................................TGAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................2311869.00186977800115446530
......................................................................GAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................2111477.00147713500077446
.....................................................................TGAGGTAGTAGGTTGTATAGTTT...........................................................................................................................................................................................................2311253.0012538260072235120
.....................................................................TGAGGTAGTAGGTTGTATAA..............................................................................................................................................................................................................201759.007591610177185335
.....................................................................TGAGGTAGTAGGTTGTATAT..............................................................................................................................................................................................................201758.007581680090209291
............................................................................................................CTATACAATGTGCTAGCTTTCT.....................................................................................................................................................................221667.00667302001414337
.....................................................................TGAGGTAGTAGGTTGTATAGC.............................................................................................................................................................................................................211570.005704360100250171
.....................................................................TGAGGTAGTAGGTTGTATAGTAC...........................................................................................................................................................................................................231519.005191580027106228
.....................................................................TGAGGTAGTAGGTTGTATAGTAAA..........................................................................................................................................................................................................241434.00434865615110212
......................................................................GAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................211380.0038036600356
.....................................................................TGAGGTAGTAGGTTGTATAGG.............................................................................................................................................................................................................211324.0032435005918050
.......................................................................AGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................191300.00300249370086
.....................................................................TGAGGTAGTAGGTTGTATAGTG............................................................................................................................................................................................................221238.0023810200292681
.......................................................................AGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................181167.0016715800324
.....................................................................TGAGGTAGTAGGTTGTATAGTC............................................................................................................................................................................................................221152.001524600383137
.....................................................................TGAGGTAGTAGGTTGTATTT..............................................................................................................................................................................................................208149.88119966800127290114
............................................................................................................CTATACAATGTGCTAGCTTTC......................................................................................................................................................................211141.0014169004365
......................................................................GAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................181120.0012011700030
......................................................................GAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................221110.00110850011311
.....................................................................TGAGGTAGTAGGTTGTATAGTAG...........................................................................................................................................................................................................231103.00103510091132
........................................................................GGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................181102.0010268150685
......................................................................GAGGTAGTAGGTTGTATT...............................................................................................................................................................................................................181102.0010210000011
.......................................................................AGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................20192.00928700023
.....................................................................TGAGGTAGTAGGTTGTATAGTTA...........................................................................................................................................................................................................23188.0088270042829
.....................................................................TGAGGTAGTAGGTTGTATTA..............................................................................................................................................................................................................20180.0080340082414
....................................................................TTGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................22171.00716910010
.....................................................................TGAGGTAGTAGGTTGTATAAA.............................................................................................................................................................................................................21170.0070110012137
......................................................................GAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................20163.00635900112
......................................................................GAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................22156.00565000033
.....................................................................TGAGGTAGTAGGTTGTATAC..............................................................................................................................................................................................................20155.0055150116815
.....................................................................TGAGGTAGTAGGTTGTATAGTATT..........................................................................................................................................................................................................24148.0048230041011
.....................................................................TGAGGTAGTAGGTTGTATAGAT............................................................................................................................................................................................................22141.00416001295
.....................................................................TGAGGTAGTAGGTTGTAA................................................................................................................................................................................................................18137.003715001516
.....................................................................TGAGGTAGTAGGTTGTA.................................................................................................................................................................................................................17136.00360003600
.....................................................................TGAGGTAGTAGGTTGTATG...............................................................................................................................................................................................................19136.003612001167
.....................................................................TGAGGTAGTAGGTTGTATAGTTC...........................................................................................................................................................................................................23132.003213001612
.....................................................................TGAGGTAGTAGGTTGTAG................................................................................................................................................................................................................18132.00321100759
.....................................................................TGAGGTAGTAGGTTGTATAGTAAT..........................................................................................................................................................................................................24130.003080011110
....................................................................TTGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................21129.00292900000
.....................................................................TGAGGTAGTAGGTTGTATAGTTAA..........................................................................................................................................................................................................24126.00266001415
.....................................................................TGAGGTAGTAGGTTGTATAGCT............................................................................................................................................................................................................22123.00231003127
.....................................................................TGAGGTAGTAGGTTGTAGT...............................................................................................................................................................................................................19221.004260051219
.......................................................................AGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................20121.00211900200
......................................................................GAGGTAGTAGGTTGTATAGTTT...........................................................................................................................................................................................................22320.67625800031
......................................................................GAGGTAGTAGGTTGTATAGC.............................................................................................................................................................................................................20120.00203170000
........................................................................GGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................19119.00191400410
.....................................................................TGAGGTAGTAGGTTGTATC...............................................................................................................................................................................................................19119.0019400357
.............................................................................................................TATACAATGTGCTAGCTTTCT.....................................................................................................................................................................21118.00181100007
.....................................................................TGAGGTAGTAGGTTGTATAGTGT...........................................................................................................................................................................................................23118.00181000044
.....................................................................TGAGGTAGTAGGTTGTATAGTTTT..........................................................................................................................................................................................................24318.00544300263
.....................................................................TGAGGTAGTAGGTTGTATCT..............................................................................................................................................................................................................20118.0018300267
....................................................................TTGAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................23117.00171700000
droBip1
-TCAC--GACCTAAC----CACCCAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGCAACTAAG-AATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCA--TTTGAT-T----------------------------------------------------------------TCAAA----------------------TATT----CCCCAATGGAGTTC-TACATAAATATGTAT---GTGSizeHit CountTotal NormTotal
No Reads
droKik1
-TTAATTTACCAAAAAATCCACCCAGCAAAAGGGACTA-AACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA-ATTTAAT-C----------------------------------------------------------------CA--A----------------------GAAA---CCACCA-------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
-TAAA--AACCAAAC----CACCCAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--ATTGAT-T----------------------------------------------------------------AA--A-----------------------ACT-----CCCAATCGAACTTCACCGC----------------SizeHit CountTotal NormTotal
No Reads
droEle1
-TTAA--AACCAAACCA-CCACCCAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACT-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--ATTGCT-T----------------------------------------------------------------TA--A-----------------------ACT-----CCCTATCGATCTGCACCAT-----CAACATAATCCSizeHit CountTotal NormTotal
No Reads
droRho1
-TAAA--AACCAAACCA-CCACCCAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--ATTGAT-T----------------------------------------------------------------AA--A-----------------------ACT-----CCCAATCGAAGTGCACCAC-----CAACAGAACCCSizeHit CountTotal NormTotal
No Reads
droBia1
-TAAA--CACCAAAC----CACCCAGCAAAAAGGACT--CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCACA--ATTGAT-T----------------------------------------------------------------TA--A-----------------------ACT-----CCCAATC-AGCTGCACCAC-----C----------SizeHit CountTotal NormTotal
No Reads
droTak1
-TAAA--AACCAAAA----TACCCAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--ATTGAT-T----------------------------------------------------------------AA--A-----------------------ACT-----CCCAATCGAATTGCACAAC-----CAACTCAA-CCSizeHit CountTotal NormTotal
No Reads
droEug1
-TAAA--AACCAAAC----CACCCAGCAAAAAGGACTA-CACT-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTATTAGCCGCA--ATTGAT-T----------------------------------------------------------------TA--A-----------------------ACT-----CCCAATCGAACTGCACCGC----------------SizeHit CountTotal NormTotal
No Reads
dm3
-TAAA--TACCAAAC----CACCTAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--TTTGAT-A----------------------------------------------------------------AA--A----------------------GAAT-----CCCAATCGAACTGCACCAC-----TTAAT------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.....................................................................TGAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................19115654942.00156549420000000000000012000001020291180405339631601575182100531135463611417376041793945461255551124313710523185913600011910953000000000000000001121931500000006111772329128264202015114320501904390180511417812091811801581802784619321111956421242202400120113217010001736273824460102523111001400007937950402801344151625359727347502011729338115179645451711670146005002438193418621001420296820310053213035191000015981844210041211881071751371081151261000117002001351012383022225100281502117562010019238000287110011767634145103647494521221231992557140333418656734126593412822198521136305233653722533343004356809808495415467349824929027211628722956901814373399333234781102350646
.....................................................................TGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................2115151085.00515108510101485300051062169703358238100046971714606042011751452654848441100577383121114181313007559123381317338995271314812249129629062344546614006160002903101500000000000000000019220315812521355551221232307420542975078186118011247469712773397507239013549589648313961891903473410351685132157559248276051463721030101156872381062784257361918013611133913654071238155363260152133964582640612681016203341338117930100030312213373815842197590149741046139381376662210084348216508162922688411542613112304305840472261145801944423702549624851566611015930281312109645316747585115812318311081293746611209225443316727409155352410136890321242773039866343019977200192114504817313429845712243140853513779286440133404792023017193130596813745042462641561420314415896939617533431206985764632246524112225257835525019691924478810843322325770197680244819522827259222066387414943394471175125829712816713259730135526308518897917429698544301000267141174082366566108611563311123791760661526413656332106846141479120288513915023206671
.....................................................................TGAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................2211591263.00159126300002867912124734730221020110275380396105603219109297446284438706959052210874613774021284511552530276731878810144487619957732620002282001350000000000000000032283825346217720112222271012769117672923413251024263613756996332103202691625571298622894307259167834819821721794238019226819648746363357194315618161969000020600000117312147613094127830091322611572113301488738000007635245493056860407329213411894524536309434950763616590568112920370488713379478214527733331876396927211582512901620033537905340692172821113347814530055804211608512599185722244761081593816564270182574150300106018277799220531122680292962715701134711644568858541518634310636130482014005294335051295769152263700542523001936643298138153164747771251894905540108122928749756466140273794989562206225560243503129130596114425244434954348813926311670393105963475413279719023434063073461175956488529440150073444828741191537935127
.....................................................................TGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................2011443865.00144386500007396900107160492020901181665074061028268104162324141683343653167273205141133762528241092821913981474424441321224124000290025011245000000000000000003438322394515531101011122513216718118802516572868200566492146744063438289354379672879153141292035284974377492201482149449124843401297945411320340004083143925845125325898957165314379207010306231041221598481290533331121608509519536061361131710215580460143240051821234108676498192600264143675313236900716050394523453727203110012282434495723195347727124712331430442957297470052716003001888151263732221837135062535903826125832240242244260516401718369121101135302261015679076327823827165912361096118973016899622104974667381283945461251291876176913928507952182546113007710428401484760932160371101815966837158545123559834243266657481940316391231554684354695202988922774284299913229402907
.....................................................................TGAGGTAGTAGGTTGTATAGTATC..........................................................................................................................................................................................................241522807.00522807000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000034587117687700000000000000000000000000000000000010000001000001000001001000000010001000100230010513111210000000
.....................................................................TGAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................231254285.0025428500007512000051600102205252416043000000002819241420161032283051235647203752230000000000000000000000046425736012101051422622312022902254468512622351058526247717742147022352313905252376221232511623001624528100000100000021024317969152455945372403900000600000647858053661166487132641265509532100210414359811398234131677381452127100112983771653270000016785733760894558735351396649587975050021343651001001971402457012423994361160083161470450163161021160511071345792071178532399343629490113522116363458074374968501181690117749901221312990421764543320552014696081941299932852537731744228940241749939412220921172454441793028972476897868583111317111
.....................................................................TGAGGTAGTAGGTTGTAT................................................................................................................................................................................................................181240869.002408690000000000000016001003847800051441313431657308996421423214592085123403166573533410008563520000000000000000046237010000001030120426421573971017271067517015225913301628192126995100171104021023393872725311900000393000001115911830411511002600000114211004046211722565914710446349303214144591296721115294013030057647481732710011802823002000013402820000028119268438414677943528283110000000000796491810112441301841002025310011281680211673100745193020240386382580029920425217438040977373207415151587660156439313321761466210701171227510803193921101050721322723722755221617781191950120800
......................................................................GAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................181201612.002016120000000000000000000000000006839188592884440391062921265216400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303023363000000040100000000000000000000000000140315470746701136030321419119894203000000000000000000000000000300000000000000000000000000000000000000000000000000000003000002000000000065137000000000020050000000001110000312202140000014
.....................................................................TGAGGTAGTAGGTTGTATAGATC...........................................................................................................................................................................................................231145827.00145827000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010127744549000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.....................................................................TGAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................22169522.00695220000160000001304001207615154083000000010761159971853623815333184610700000000000000000000000532343874140257018360976313123232291132261292873190609891527228731022546731752151122420600000100000110017212332273751019251300010122290011292417040311823971231576075868182370110125255422402513010063511310002456368214417123001365461422012874511543513134362253180001181400003175726220001922880167200112592020110850102771000115599482441027043931400410860435893774237645840196260635631273658820317116422089196701250451555249231224780417396354614868989937014758611376133591140065
.....................................................................TGAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................21144777.0044777000084120000511010011022111102100000000043101731181831316392200000000000000000000000000069100000021016210256370014515501202620303362601601509221162753336500010000002000045710811131750000000003013317601080026106277428044363400000891617105180003301198020005176020000003025715822051683714573583866000014286530000018335600094143097300004292011048200096000037303362052621618127000705692041166110271573204452705405127210761681061297106512850013819630040493155702930621079027559857316769792213351398302600
.....................................................................TGAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................23138634.00386340000131000000200000000344000000000002201100453119425310000000000000000000000011003170600000732744804293001614256120260143313050593163715054170371243100000000000000082110216103541220000010000067880920033812403147020101700008269915312000522141102101132100200000017105255118122170125189142128181100038521600000152951010055103054000011651011002300013802006043620913741352387003572221605142098816580120312622471283706919374526784669000155267299188318156405163540608042688073311338831510949331113000
.....................................................................TGAGGTAGTAGGTTGTATAA..............................................................................................................................................................................................................20125375.0025375000055200000140100010043800000000001011112021211112621000000000000000000000000100213000000010591072112910241627131608310101500504110702060434471510000000800000142306310120000000010085113060102253918281913501532000008561250800013038100000016303000000101132671141265111381100007100000035264910047147068100001781000025501052000015104736129156300040185110786175515780015912141663356183755316745864900346710818663168384457116631202073201745223362762759500400
.....................................................................TGAGGTAGTAGGTTGTATAGTAAA..........................................................................................................................................................................................................24120722.002072200006110001000000000001002000000000211021457243284262000000000000000000000001120110000001811813190195100191178200601104030119015504044701731319000000000000000159810324813000000000004263029008262220420511000001823476160003287000000363401010020048836471021074470881627193000012654000001475500013230291000011600000029000631000462712687352152817000164585464962263743013092066752057517231825940533400122189189206281274205130020122211787403721633291896435732001100
............................................................................................................CTATACAATGTGCTAGCTTTCT.....................................................................................................................................................................22119843.00198430000205000010305310103516148000110169327851637100173447415917622213302027345951409000239800000000000000000411126200000072341642931267914600208160400110202406614122101002084286630220911220195573100010000000000085836232114539484531000000040003327990271270128461883619719034865121826700000180402228121600300181000000113000100000047109131332710140427630811029229910000000011732942520972051114700411031125199903816661000281511987222164715700111236228233836045600181571463162143620892710121494176444418821415752026616328987461424614390015029
.....................................................................TGAGGTAGTAGGTTGTATT...............................................................................................................................................................................................................19119491.001949100000000000000100000017901000000001002021220400014401000000000000000000000000000140000000000700187300001331001009300009168402031204112449421001000005600000100123000010000000000038790354831631561073213954411721388000003456233000170200000004200600000033329416301416135271000000100000121323000151651401000022000102150102311001147315145452200110255756342584124200744222391021610231362804210015487270402628315120121013805935998160279385461000200
....................................................................TTGAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................20118482.0018482000000000000000000000000000743181821743677151984207400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000310000000000000000000000000000000000000018398820861246040921520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGAGGTAGTAGGTTGTATAGG.............................................................................................................................................................................................................21118030.001803000001220000111000040010130000000000116000213731011618131400000000000000000000000000010000000000350150400853600021152000070510313270291153900000000000000043335184250000000000009881059003743110566386591080000046411350002211300000270020010001537156541354210000210000014863000293804600010850000032200065000013110475609889394600317247025234688206924000131970609895410360738373981734003121120107245500200652134715153225000000
.....................................................................TGAGGTAGTAGGTTGTAA................................................................................................................................................................................................................18115896.0015896000000000000001000000000000000000000000000000000100000000000000000000000000001004000000000060053500001810060001010030500000000411011772021000001090000000000400000000000000061605199494621797600053725982702513000006032000020300000000000000000002100200030100002000000212000021300000007000000200010000040241600000522144951222100061104002104353356000450000132008010034310316492773000000
.....................................................................TGAGGTAGTAGGTTGTATAGC.............................................................................................................................................................................................................21115755.00157550000235000022207000000201600000000000062151270007135511000000000000000000000000000930000001402201324290066558042048102041902050303270191121400000000000100028754447893000000000009310006300192701919715195501000085654612300170388001010120010000001574407712511611107160000105000000109310029400372010083000004190005100007579641273434941821700492337878105450187900174128226332826714014485843853055800791231475160291803292020814611245474115208279219000401
.....................................................................TGAGGTAGTAGGTTGTATG...............................................................................................................................................................................................................19112317.00123170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000001000000000000001914300000002020000000000100002007300000043011861859013262865488250680200000000011000000000000011000000000013001103000000000000001000024010000020000001000100001300010000006171415270020010000908900001000005500601196123857000001644
.....................................................................TGAGGTAGTAGGTTGTATC...............................................................................................................................................................................................................1919686.0096860000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000700000020000000100010012000000001323148115100000014300000000000000000000000000340243454740494131416819970140000001020000010100000000000000000000110000000000036270000001700000502000000000000100000000030017010000828975900870211151631119210001000001820040221242335811000005
.....................................................................TGAGGTAGTAGGTTGTATAT..............................................................................................................................................................................................................2018687.008687000010000000000000000141170110000000306030071030311211130000000000000000000000000001500000000163050250000340001003101001422611200100441241360220000000000100000340571040021000000000013042033013203622804843000001722203000001930000003101000000016810352315340000320000096133800089940331001225606000270002611006310824131800051454613462556310110262214191635175301802120031720202012585000430393124029652738098100000
.....................................................................TGAGGTAGTAGGTTGTATAGTC............................................................................................................................................................................................................2217442.0074420000310000100000000000030000000000013402065221330729221100000000000000000000000000020000000000073182800112800000131000012011396019033120115414879000001000000000434221011103000000000103420025100130140112164000002111800001115000000350110000003239217825525900001405900000201456100252803210011741000015000950000121721241118121220008609993564910059410293014925748741458402346011828353020266418410101017447517825469576001300
.....................................................................TGAGGTAGTAGGTTGTATAGTAC...........................................................................................................................................................................................................2316780.006780000020000000000000000120000000000003152100301322833210000000000000000000000000001000100000000060510022010000020010010203000318020097000000000000000254101422300000010000091506003112701601200000091332770003021130000068000000000532142824211133283032300000849474000002311000101101000000360000008000290000156322398346200044010593541330039230164784366014396959600664970514138853900025413669114116377227197200600
......................................................................GAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................2015331.005331000010000010000000001005010031616521512001013010502352000011100000000000000000000040000000002140225102000717630010430010190248110121214463230000104000000000334444218310000000000090930772018102380412671931120000064111523006110180000314000000000625122036212127242422310000000000002600001180700010420000011200022000049308766108512490016471441651012250056450212376636603964810068831112210207315800450134382142258079910011017
.....................................................................TGAGGTAGTAGGTTGTATATC.............................................................................................................................................................................................................2114741.0047410000000000000000000000000000000000000000010000000200000000000000000000000000000001000000000100000000000000000000000000000000020142000000000100000001000000000000000000310200011000000000000000000000000000000000000000000100000000000033391257000000100001201000001100000100000000216020100400002141700200551101724700000000000000001520002000000
.....................................................................TGAGGTAGTAGGTTGTATAGTTT...........................................................................................................................................................................................................2313927.003927000031000000000000100001000000000001000000100001000000000000000000000000000000003010000001014101111200004322020401000090194060519117011180000010000000001410014000000000000000151202100320020162082239000016625100000700000012518000000028471732217113513190000100000033720005110600000800100020001200002241912831100041825221518927200471814641346842493880067211010920690010038671121128226174000100
............................................................................................................CTATACAATGTGCTAGCTTTC......................................................................................................................................................................2113614.003614000050000000300130001032100020297642022023902028042133205200023000000000000000000000030000000022801217150024136500530163733108111313040102011133000000000000000191606220200000000000441110333822102685631451572479000002785513002030000000000000000082445231030202310141900000000000911070010780180013041000217160005580000327628833103200145231605971860014261129486242300133821003436236002701053219471938000500
........................................................................GGTAGTAGGTTGTATAGTATC..........................................................................................................................................................................................................2112989.00298900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014975000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TGAGGTAGTAGGTTGTATAGTG............................................................................................................................................................................................................2212975.0029750000610000002000000001000000000000000002001700100271800000000000000000000000000000200000000238115230012722000102712001122422090561309358000011000000000401541212000000000000017210216436914289262256000008221200005090000001300400000073812235504132680000100000012411000221401701000420000004000161000731147393260002208110788188106331014112672254309495001848380011185111900540105399729216237000100
.....................................................................TGAGGTAGTAGGTTGTATAC..............................................................................................................................................................................................................2012503.002503000081000000000000000000000000000020000000000010001020000000000000000000000000001000000000010001000004000000000100505000000001706500000000000000000100900010000000000051101024610601322774727050500000011001000001060000000000000100006462552233800001640000019100065020000040000013000100005531176220900082662564420700131204216310287314743000053010316170017030159436151735000000
.....................................................................TGAGGTAGTAGGTTGTATAGTAG...........................................................................................................................................................................................................2312487.00248700000100000000000000010000000000000000020001000000100000102123410000000000000000000001100000001031114270000700010100000040960301110030530000000000000000111231111000000000006100100037190100191000001411500000114000000140000000003456152291017810140000010000002410002605100001800000020001400004434234256310011181651598312900221701472431237225545001516161000132215300400853097112183839001100
.....................................................................TGAGGTAGTAGGTTGTATAAA.............................................................................................................................................................................................................2112452.002452000003000000000000000000000000000000000000101000102000000000000000000000000000004500000000001690040000000190000020000120610001000302000000000000000000000500000000000000041048017643707000000300210000020000000100000000001126123314040000114000000120000280200000910000020004000051503250300048763345900015401152034018373900241133002022350071122370123839357681300000
.....................................................................TGAGGTAGTAGGTTGTATTT..............................................................................................................................................................................................................2012083.0020830000100000000000000000030000000000010000001010000110000000000000000000000000000030000000000300201000000000000000000050000010070351200020000000000000000200000000000000062805001212033016100000510100001090000000000000000002501312010100000000000011610002340400000210000000005000023013140100012579387213600731510301301254900194100023015009026070510811312342100000
......................................................................GAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................2111958.00195800001100000000000000002100012422261100020002200010110100002140000000000000000000100000000001202022100911400520261000000510070326012011130000000000000001626280400000000000001422010212325242223250000001500112000105000000020050000015621020811611418180000710000033000002010000060000003000190000231112117555320005282541245700117131857625203733320042476820021232152002106515529452127000000
......................................................................GAGGTAGTAGGTTGTATAGTATC..........................................................................................................................................................................................................2311735.00173500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347388000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................1911734.001734000000000000000000000005000012282510100000000000000100000013940000000000000000000001000000000020011230014300000040000041110000320031215250000000000000000001012000000000000000424602000102933017401261500000350110000000000000400010000001921513460061000000000001300003102000008000000300040000873386232110001317162551220033140851027158273900610170001415160013027933232922150000048
.......................................................................AGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................1911620.0016200000000000000000000010010000000000000000011000013101000000000000000000000000000010000000000000401000010000003200000001010000000100000000000000003113151020000000000009140100002202014221940000071182000501000001200000000000622103010011130000000006000013020000070000001000000005529711143041400022484126701500013301021015836160001470000311150011023186388191513000000
droSim2
-TAAA--AACCAAAC----CACCTAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--TTTGAT-T----------------------------------------------------------------AA--A----------------------GAAC-----CCCAATCGAACTGCACCAC-----TTACT------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.....................................................................TGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................211527515.0052751527574205947415420467815424841937952725393647429203542527853733
.....................................................................TGAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................221341932.003419328063823728489217664289559505236588214344262236517941521863
.....................................................................TGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................201147099.00147099543337801256865449225511348311937561421015306373525004
.....................................................................TGAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................22129842.0029842662780153200128772717987710289722619000
.....................................................................TGAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................23127738.002773826940814140030512828944023209618245053
.....................................................................TGAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................19113183.001318322781199522110733922650499109081742350011
.....................................................................TGAGGTAGTAGGTTGTAT................................................................................................................................................................................................................1818520.008520140145141281339421519818223157118421000
.....................................................................TGAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................2314773.004773369308600659573301301533155002
.....................................................................TGAGGTAGTAGGTTGTATAGG.............................................................................................................................................................................................................2113294.00329413481495422100626400100882000
.....................................................................TGAGGTAGTAGGTTGTATAGTTT...........................................................................................................................................................................................................2312538.0025383056034002932117202502087000
.....................................................................TGAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................2112399.0023993572951135003031970066055990000
.....................................................................TGAGGTAGTAGGTTGTATT...............................................................................................................................................................................................................1912132.0021321039466254008429607010435000
.....................................................................TGAGGTAGTAGGTTGTATAGC.............................................................................................................................................................................................................2111879.001879108964501000343600160742000
......................................................................GAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................2011244.00124412140848428623230120012162001
.....................................................................TGAGGTAGTAGGTTGTATAGTAAA..........................................................................................................................................................................................................2411229.001229661140320092917025087714100
.....................................................................TGAGGTAGTAGGTTGTATAA..............................................................................................................................................................................................................201789.0078962410470057380023017504000
.....................................................................TGAGGTAGTAGGTTGTA.................................................................................................................................................................................................................171758.00758000000215154313700213000
.....................................................................TGAGGTAGTAGGTTGTATAGTAG...........................................................................................................................................................................................................231707.0070710042014208160050645001
.....................................................................TGAGGTAGTAGGTTGTATAGTTA...........................................................................................................................................................................................................231525.00525122050015910700166299000
......................................................................GAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................211479.0047934025013262521006081130010
......................................................................GAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................191472.0047232028036116120030227000
.....................................................................TGAGGTAGTAGGTTGT..................................................................................................................................................................................................................161440.0044000000045147408011000
............................................................................................................CTATACAATGTGCTAGCTTTCT.....................................................................................................................................................................221428.00428482423210710327380082828001
.....................................................................TGAGGTAGTAGGTTGTATTT..............................................................................................................................................................................................................201408.004085940015007120105278000
.....................................................................TGAGGTAGTAGGTTGTATAGTAC...........................................................................................................................................................................................................231376.0037618015303006600100116010
..........................................................................TAGTAGGTTGTATAGT.............................................................................................................................................................................................................161269.0026900000096942077000000
.....................................................................TGAGGTAGTAGGTTGTATAGTG............................................................................................................................................................................................................221258.0025819310600680028011148001
.....................................................................TGAGGTAGTAGGTTGTATAT..............................................................................................................................................................................................................201252.00252302602300231100304132000
..........................................................................TAGTAGGTTGTATAGTA............................................................................................................................................................................................................171232.0023200000087900055000000
.....................................................................TGAGGTAGTAGGTTGTATAGTC............................................................................................................................................................................................................221221.002218738010041700901055000
........................................................................GGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................181177.001771113070182300114000000
.....................................................................TGAGGTAGTAGGTTGTAC................................................................................................................................................................................................................181127.0012710225000000000000000
.......................................................................AGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................191109.001092780490264004009000
.....................................................................TGAGGTAGTAGGTTG...................................................................................................................................................................................................................151101.00101000000202194002000
............................................................................................................CTATACAATGTGCTAGCTT........................................................................................................................................................................19195.00950000365800001000000
........................................................................GGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................19194.009485010014130052000001
.....................................................................TGAGGTAGTAGGTTGTATAC..............................................................................................................................................................................................................20179.00794620000022003006000
...........................................................................AGTAGGTTGTATAGT.............................................................................................................................................................................................................15177.00770000005110061000000
...........................................................................AGTAGGTTGTATAGTA............................................................................................................................................................................................................16174.007400000014140046000000
............................................................................................................CTATACAATGTGCTAGCT.........................................................................................................................................................................18174.00740000314300000000000
....................................................................TTGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................21173.00730001039000000546000
.........................................................................GTAGTAGGTTGTATAGT.............................................................................................................................................................................................................17170.0070000000030067000000
.....................................................................TGAGGTAGTAGGTTGTATC...............................................................................................................................................................................................................19165.00654319000000001002000
.....................................................................TGAGGTAGTAGGTTGTATAAA.............................................................................................................................................................................................................21163.006313150600200010125000
............................................................................................................CTATACAATGTGCTAGCTTTC......................................................................................................................................................................21162.00626204162922001000000
......................................................................GAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................21161.00610003000100000228000
.........................................................................GTAGTAGGTTGTATAGTA............................................................................................................................................................................................................18159.0059040002251045000000
.......................................................................AGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................20153.00531110900715007003000
.....................................................................TGAGGTAGTAGGTTGTATAGTAAC..........................................................................................................................................................................................................24146.00462811300001001011000
......................................................................GAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................18145.00451001571701002002000
............................................................................GTAGGTTGTATAGTA............................................................................................................................................................................................................15144.0044000000260036000000
.....................................................................TGAGGTAGTAGGTTGTAA................................................................................................................................................................................................................18143.0043166080042002005000
......................................................................GAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................22141.00411002200000010215000
.....................................................................TGAGGTAGTAGGTTGTATAGTTAA..........................................................................................................................................................................................................24138.0038210000100000826000
...................................................TTTTTCTCTCTGGCAAAT..................................................................................................................................................................................................................................18137.0037334000000000000000
..........................................................................TAGTAGGTTGTATAG..............................................................................................................................................................................................................15136.003600000011140011000000
.....................................................................TGAGGTAGTAGGTTGTATTA..............................................................................................................................................................................................................20234.506927160300340000214000
..........................................................................TAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................18231.00620000001834109000000
.....................................................................TGAGGTAGTAGGTTGTATAGTATA..........................................................................................................................................................................................................24131.0031120100000000027000
........................................................................GGTAGTAGGTTGTATAG..............................................................................................................................................................................................................17129.0029000000150022010000
.......................................................................AGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................18127.0027210162210001002000
.....................................................................TGAGGTAGTAGGTTGTATATA.............................................................................................................................................................................................................21125.0025400200250000111000
.....................................................................TGAGGTAGTAGGTTGTATAGTAGT..........................................................................................................................................................................................................24124.0024200051402000001000
..................................................CTTTTTCTCTCTGGCAAAT..................................................................................................................................................................................................................................19124.0024194000000001000000
.....................................................................TGAGGTAGTAGGTTGTATG...............................................................................................................................................................................................................19123.002364020000002009000
....................................................................TTGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................22122.0022000160500000001000
.....................................................................TGAGGTAGTAGGTTGTATAGTGC...........................................................................................................................................................................................................23121.0021000000000021000000
.....................................................................TGAGGTAGTAGGTTGTATAGGT............................................................................................................................................................................................................22121.0021000500200020210000
droSec2
-TAAA--AACCAAAC----CACCTAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--TTTGAT-T----------------------------------------------------------------AA--A----------------------GAAC-----CCCAATCGAACTGCACCAC-----TTACT------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.....................................................................TGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................211387183.0038718369404167505127150147
.....................................................................TGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................20189796.008979621372309812337420
.....................................................................TGAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................22187438.008743820052393132328050
.....................................................................TGAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................23118084.00180841395988056804
.....................................................................TGAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................2219587.0095872518439602673
.....................................................................TGAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................1917160.007160752215504253
.....................................................................TGAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................2115691.005691514282202355
......................................................................GAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................2014122.00412238191780125
.....................................................................TGAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................2313452.00345239920660987
.....................................................................TGAGGTAGTAGGTTGTAT................................................................................................................................................................................................................1812554.0025544713712045
.....................................................................TGAGGTAGTAGGTTGTATAA..............................................................................................................................................................................................................2012333.0023338989221350
.....................................................................TGAGGTAGTAGGTTGTATT...............................................................................................................................................................................................................1912282.00228240178621093
.....................................................................TGAGGTAGTAGGTTGTATAGTAAA..........................................................................................................................................................................................................2411628.001628908800658
......................................................................GAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................2111202.001202111349040
............................................................................................................CTATACAATGTGCTAGCTTTCT.....................................................................................................................................................................2211150.0011505801291440
......................................................................GAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................1911144.001144107927038
.....................................................................TGAGGTAGTAGGTTGTATAGG.............................................................................................................................................................................................................2111057.00105798335039
.....................................................................TGAGGTAGTAGGTTGTATTT..............................................................................................................................................................................................................201835.008351354501249
.....................................................................TGAGGTAGTAGGTTGTATAGTTT...........................................................................................................................................................................................................231731.007311723670192
.....................................................................TGAGGTAGTAGGTTGTATAT..............................................................................................................................................................................................................201728.007281183090301
.....................................................................TGAGGTAGTAGGTTGTATAGC.............................................................................................................................................................................................................211574.00574422852245
.....................................................................TGAGGTAGTAGGTTGTATAGTAC...........................................................................................................................................................................................................231361.00361251951140
............................................................................................................CTATACAATGTGCTAGCTTTC......................................................................................................................................................................211328.00328115500163
.....................................................................TGAGGTAGTAGGTTGTATTA..............................................................................................................................................................................................................201292.00292151250152
.....................................................................TGAGGTAGTAGGTTGTATAAA.............................................................................................................................................................................................................211287.0028791410137
.......................................................................AGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................191231.0023116824039
.....................................................................TGAGGTAGTAGGTTGTATAGTG............................................................................................................................................................................................................221209.0020932520125
.....................................................................TGAGGTAGTAGGTTGTATAGTC............................................................................................................................................................................................................221180.001802388069
......................................................................GAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................211141.00141134403
......................................................................GAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................221123.001239814011
.....................................................................TGAGGTAGTAGGTTGTATAGTTA...........................................................................................................................................................................................................231120.001201069041
.....................................................................TGAGGTAGTAGGTTGTATAGTAG...........................................................................................................................................................................................................231114.001142239053
.....................................................................TGAGGTAGTAGGTTGTATAC..............................................................................................................................................................................................................201111.001111242057
.....................................................................TGAGGTAGTAGGTTGTATAGAT............................................................................................................................................................................................................221100.00100268030
.......................................................................AGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................20184.008474505
.......................................................................AGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................18182.0082651016
.....................................................................TGAGGTAGTAGGTTGTATC...............................................................................................................................................................................................................19175.0075134040
.....................................................................TGAGGTAGTAGGTTGTAA................................................................................................................................................................................................................18170.0070141154
.....................................................................TGAGGTAGTAGGTTGTATAGTTAA..........................................................................................................................................................................................................24166.0066037029
....................................................................TTGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................22152.005252000
......................................................................GAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................18144.004440004
............................................................................................................CTATACAATGTGCTAGCTTT.......................................................................................................................................................................20143.0043149020
.....................................................................TGAGGTAGTAGGTTGTATATA.............................................................................................................................................................................................................21137.0037181108
.....................................................................TGAGGTAGTAGGTTGTATG...............................................................................................................................................................................................................19137.0037219016
......................................................................GAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................22135.003531301
.............................................................................................................TATACAATGTGCTAGCTTTCT.....................................................................................................................................................................21134.003431102
........................................................................GGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................18133.003322407
.....................................................................TGAGGTAGTAGGTTGTATAGTGA...........................................................................................................................................................................................................23129.0029112016
.....................................................................TGAGGTAGTAGGTTGTATTC..............................................................................................................................................................................................................20127.0027113013
.....................................................................TGAGGTAGTAGGTTGTATCT..............................................................................................................................................................................................................20127.0027214011
......................................................................GAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................20126.002621302
.....................................................................TGAGGTAGTAGGTTGTATAGGT............................................................................................................................................................................................................22126.002623300
.....................................................................TGAGGTAGTAGGTTGTATAGTATA..........................................................................................................................................................................................................24124.002411706
.....................................................................TGAGGTAGTAGGTTGTATAGTTC...........................................................................................................................................................................................................23123.002339011
.....................................................................TGAGGTAGTAGGTTGTATAGTACA..........................................................................................................................................................................................................24122.002211506
.....................................................................TGAGGTAGTAGGTTGTAGT...............................................................................................................................................................................................................19420.5082349030
.....................................................................TGAGGTAGTAGGTTGTATAGTAAC..........................................................................................................................................................................................................24120.002031205
.....................................................................TGAGGTAGTAGGTTGTAC................................................................................................................................................................................................................18119.001900019
.....................................................................TGAGGTAGTAGGTTGTATAGTAAG..........................................................................................................................................................................................................24116.00163805
....................................................................TTGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................21116.001616000
droYak3
-------------AC----CTCCTAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--TTTGAT-T----------------------------------------------------------------AA--A----------------------GAAT-----CCCAATCGAACCGCACCAC-----TTACTCCA-CTSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.....................................................................TGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................211184175.001841752129769150221216312289984834404432
.....................................................................TGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................20153716.0053716409623385035969101291011300021
.....................................................................TGAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................22138427.00384277802160134141733313397140680
......................................................................GAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................2015047.00504754972130820290000
.....................................................................TGAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................1914970.00497023059550026947893600027
.....................................................................TGAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................2214255.0042555722014102485668540000
.....................................................................TGAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................2313961.0039612648480323644621610120
.....................................................................TGAGGTAGTAGGTTGTAT................................................................................................................................................................................................................1811848.001848444579002654683000062
......................................................................GAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................1911414.001414013960034110000
.....................................................................TGAGGTAGTAGGTTGTATAGG.............................................................................................................................................................................................................2111364.001364122338003554140000
.....................................................................TGAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................2111324.001324252325001002583890000
.....................................................................TGAGGTAGTAGGTTGTATT...............................................................................................................................................................................................................1911164.00116450127400811331750000
.....................................................................TGAGGTAGTAGGTTGTATAGC.............................................................................................................................................................................................................2111163.001163929301028107680000
......................................................................GAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................2111096.001096410760014110000
.....................................................................TGAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................2311061.0010613931700481045530000
.....................................................................TGAGGTAGTAGGTTGTATAA..............................................................................................................................................................................................................201494.00494476500571042210000
.......................................................................AGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................191402.00402123657031140000
.....................................................................TGAGGTAGTAGGTTGTATAGTAAA..........................................................................................................................................................................................................241387.0038782460118392010000
.....................................................................TGAGGTAGTAGGTTGTATAT..............................................................................................................................................................................................................201324.0032410370096145360000
.....................................................................TGAGGTAGTAGGTTGTATAGTTT...........................................................................................................................................................................................................231283.0028331125001222930000
............................................................................................................CTATACAATGTGCTAGCTTTCT.....................................................................................................................................................................221275.00275722220917160020
.....................................................................TGAGGTAGTAGGTTGTATAGTAC...........................................................................................................................................................................................................231245.002451522300724390000
.....................................................................TGAGGTAGTAGGTTGTATAGTC............................................................................................................................................................................................................221232.002328738003348260000
........................................................................GGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................181207.0020711183600250000
.....................................................................TGAGGTAGTAGGTTGTATTT..............................................................................................................................................................................................................201159.001592354001429390000
.....................................................................TGAGGTAGTAGGTTGTATAGTG............................................................................................................................................................................................................221134.001342471001217100000
......................................................................GAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................211121.001210118000120000
..............................................................................................................ATACAATGTGCTAGCTTTCT.....................................................................................................................................................................201120.001200119100000000
................................................................................................................ACAATGTGCTAGCTTTCT.....................................................................................................................................................................18186.0086086000000000
.......................................................................AGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................18178.0078371001030000
....................................................................TTGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................22175.0075074000100000
.....................................................................TGAGGTAGTAGGTTGTATAC..............................................................................................................................................................................................................20171.007135200519100000
......................................................................GAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................18168.0068165000010001
......................................................................GAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................22166.0066066000000000
.....................................................................TGAGGTAGTAGGTTGTATAGTAG...........................................................................................................................................................................................................23161.006112900511150000
.......................................................................AGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................20160.0060351000150000
...............................................................................................................TACAATGTGCTAGCTTTCT.....................................................................................................................................................................19159.0059058100000000
.....................................................................TGAGGTAGTAGGTTGTAC................................................................................................................................................................................................................18150.0050442001300000
.....................................................................TGAGGTAGTAGGTTGTATAAA.............................................................................................................................................................................................................21148.00481660023210000
.....................................................................TGAGGTAGTAGGTTGTATC...............................................................................................................................................................................................................19144.0044371000330000
.....................................................................TGAGGTAGTAGGTTGTATG...............................................................................................................................................................................................................19142.0042830013000027
.............................................................................................................TATACAATGTGCTAGCTTTCT.....................................................................................................................................................................21134.0034133000000000
.....................................................................TGAGGTAGTAGGTTGTA.................................................................................................................................................................................................................17134.0034000003400000
....................................................................TTGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................21128.0028028000000000
.....................................................................TGAGGTAGTAGGTTGTATAGTTA...........................................................................................................................................................................................................23128.002898000470000
............................................................................................................CTATACAATGTGCTAGCTTTC......................................................................................................................................................................21127.0027117001620000
.....................................................................TGAGGTAGTAGGTTGTATTA..............................................................................................................................................................................................................20122.002284001360000
....................................................................TTGAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................23121.0021021000000000
......................................................................GAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................22120.0020020000000000
.....................................................................TGAGGTAGTAGGTTGTAA................................................................................................................................................................................................................18120.0020040051100000
......................................................................GAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................20120.0020019000100000
......................................................................GAGGTAGTAGGTTGTATT...............................................................................................................................................................................................................18118.0018018000000000
.....................................................................TGAGGTAGTAGGTTGTAG................................................................................................................................................................................................................18112.001251003120000
......................................................................GAGGTAGTAGGTTGTATAGTTT...........................................................................................................................................................................................................22110.0010010000000000
.....................................................................TGAGGTAGTAGGTTGTATAGTCA...........................................................................................................................................................................................................23110.001001000270000
droEre2
-TAAA--AACCAAAC----CACCTAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCA--TTTGAT-T----------------------------------------------------------------AA--A----------------------GAAT-----CCCAATCGAACTGCACCAC-----TTGCTCCA-CCSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.....................................................................TGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................211631309.00631309995047330766234209264178329
.....................................................................TGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................201206387.002063874140001161147382278597953
.....................................................................TGAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................221136725.0013672522606251207597774918825
.....................................................................TGAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................23123925.002392512900550011318107652
.....................................................................TGAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................19114106.001410613840488152476746240
.....................................................................TGAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................22113808.00138084046172805335367721
......................................................................GAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................2016043.006043546883002502870
.....................................................................TGAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................2115697.00569754402311226726531
.....................................................................TGAGGTAGTAGGTTGTAT................................................................................................................................................................................................................1815479.0054798100358011702853288
.....................................................................TGAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................2313846.00384639901270196113590
.....................................................................TGAGGTAGTAGGTTGTATAA..............................................................................................................................................................................................................2012794.0027941350110094316060
......................................................................GAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................1912184.0021842016012079743
.....................................................................TGAGGTAGTAGGTTGTATAGTAAA..........................................................................................................................................................................................................2412015.0020159603508969880
.....................................................................TGAGGTAGTAGGTTGTATT...............................................................................................................................................................................................................1911661.00166131205406956000
.....................................................................TGAGGTAGTAGGTTGTATAGG.............................................................................................................................................................................................................2111553.0015531418038042550
......................................................................GAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................2111489.001489132309095620
.....................................................................TGAGGTAGTAGGTTGTATAT..............................................................................................................................................................................................................2011175.001175132017102646080
............................................................................................................CTATACAATGTGCTAGCTTTCT.....................................................................................................................................................................221913.009132320270496050
.....................................................................TGAGGTAGTAGGTTGTATAGTTT...........................................................................................................................................................................................................231846.0084624803303532111
.....................................................................TGAGGTAGTAGGTTGTATAGC.............................................................................................................................................................................................................211816.008164808502214620
.....................................................................TGAGGTAGTAGGTTGTATAGTAC...........................................................................................................................................................................................................231488.004883101401512920
.....................................................................TGAGGTAGTAGGTTGTATG...............................................................................................................................................................................................................191441.004416030721404
.....................................................................TGAGGTAGTAGGTTGTATAGTG............................................................................................................................................................................................................221384.00384520190992140
.....................................................................TGAGGTAGTAGGTTGTATAGTAG...........................................................................................................................................................................................................231346.00346330140962030
.......................................................................AGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................191337.0033725324029490
.....................................................................TGAGGTAGTAGGTTGTATAGTC............................................................................................................................................................................................................221276.00276370450911030
......................................................................GAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................211213.00213199020660
.....................................................................TGAGGTAGTAGGTTGTATAAA.............................................................................................................................................................................................................211207.002078030751210
.....................................................................TGAGGTAGTAGGTTGTATTT..............................................................................................................................................................................................................202160.0032093080161580
.....................................................................TGAGGTAGTAGGTTGTATAC..............................................................................................................................................................................................................201146.0014617015045690
.....................................................................TGAGGTAGTAGGTTGTATAGTTA...........................................................................................................................................................................................................231141.0014123011058490
............................................................................................................CTATACAATGTGCTAGCTTTC......................................................................................................................................................................211130.00130430506760
........................................................................GGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................181119.001193031045400
.......................................................................AGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................181117.00117950205150
.....................................................................TGAGGTAGTAGGTTGTAGT...............................................................................................................................................................................................................192114.002286010125960
......................................................................GAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................221107.001077002017180
.....................................................................TGAGGTAGTAGGTTGTAA................................................................................................................................................................................................................18189.0089801022535
.......................................................................AGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................20187.008769020880
....................................................................TTGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................22185.008581000220
......................................................................GAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................18170.007060010450
.....................................................................TGAGGTAGTAGGTTGTATATA.............................................................................................................................................................................................................21168.006813011012320
.....................................................................TGAGGTAGTAGGTTGTATTA..............................................................................................................................................................................................................20164.00641201019320
......................................................................GAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................20153.005343000550
.....................................................................TGAGGTAGTAGGTTGTATAGTTAA..........................................................................................................................................................................................................24152.0052300022270
.....................................................................TGAGGTAGTAGGTTGTATAGGT............................................................................................................................................................................................................22151.005148020010
.....................................................................TGAGGTAGTAGGTTGT..................................................................................................................................................................................................................16148.004800000048
........................................................................GGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................19136.003690001890
.....................................................................TGAGGTAGTAGGTTGTATAGTATA..........................................................................................................................................................................................................24135.0035100012220
.......................................................................AGGTAGTAGGTTGTATG...............................................................................................................................................................................................................17131.003100000031
......................................................................GAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................22130.003021010530
....................................................................TTGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................21130.003028000110
dp5
-TAAG----------------CCCAACAAAAAGGACCAGCACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTACTT-CA-GATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCTCA--TTTGAA-CAGCCCAGCCCCCCGCCCCAAACAGCT-----------CCCGTACGCCCCCCCCCAGCTACGAACAA--A----------------------G------------------------------------T---GTGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.....................................................................TGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................211170482.0017048220072531248335353431243151342067481726
.....................................................................TGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................201125585.0012558559586241171842065318622459420656654
.....................................................................TGAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................22152007.005200744190693131519591810177350960455908
.....................................................................TGAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................2219557.0095571044331586013541614290119970
......................................................................GAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................2015607.005607153121257088126461
.....................................................................TGAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................1915413.00541316251101090851126910552725
.....................................................................TGAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................2314006.004006188802114411939220375120
......................................................................GAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................1913892.0038920380802023304232
.....................................................................TGAGGTAGTAGGTTGTAT................................................................................................................................................................................................................1813136.00313682156059069520431496
.....................................................................TGAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................2112190.002190170404002745131325197
.....................................................................TGAGGTAGTAGGTTGTATT...............................................................................................................................................................................................................1911919.001919413330590242272090
......................................................................GAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................2111593.001593114400904386185
.....................................................................TGAGGTAGTAGGTTGTATAGC.............................................................................................................................................................................................................2111474.00147424211243010778010
.....................................................................TGAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................2311088.00108802810160112417571969
.....................................................................TGAGGTAGTAGGTTGTATAGTTT...........................................................................................................................................................................................................231995.0099514210510104193351891
.....................................................................TGAGGTAGTAGGTTGTATAA..............................................................................................................................................................................................................201625.0062501950701112816241
.....................................................................TGAGGTAGTAGGTTGTATTT..............................................................................................................................................................................................................201590.005900373020065126060
.......................................................................AGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................191576.00576055657042020
............................................................................................................CTATACAATGTGCTAGCTTTCT.....................................................................................................................................................................221394.00394032922601916011
.....................................................................TGAGGTAGTAGGTTGTATAT..............................................................................................................................................................................................................201350.003500960130126972160
........................................................................GGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................181333.00333030634006491
.....................................................................TGAGGTAGTAGGTTGTATAGTAAA..........................................................................................................................................................................................................241290.00290060030281724221
......................................................................GAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................211282.00282027303006000
.....................................................................TGAGGTAGTAGGTTGTATAGTC............................................................................................................................................................................................................221260.0026018605616646121
..............................................................................................................ATACAATGTGCTAGCTTTCT.....................................................................................................................................................................201199.00199019900000000
.......................................................................AGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................181183.00183017900040000
......................................................................GAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................181145.00145014310010000
................................................................................................................ACAATGTGCTAGCTTTCT.....................................................................................................................................................................181141.00141014100000000
.....................................................................TGAGGTAGTAGGTTGTATAGG.............................................................................................................................................................................................................211124.001243480200428030
......................................................................GAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................221108.00108076010625000
.....................................................................TGAGGTAGTAGGTTGTATAGTG............................................................................................................................................................................................................221102.001020430103918001
.......................................................................AGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................20195.009509001031000
.....................................................................TGAGGTAGTAGGTTGTATAGTAG...........................................................................................................................................................................................................23186.00860150208911365
............................................................................................................CTATACAATGTGCTAGCTTTC......................................................................................................................................................................21185.008506408076000
...............................................................................................................TACAATGTGCTAGCTTTCT.....................................................................................................................................................................19185.008508221000000
....................................................................TTGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................22184.008408300000010
......................................................................GAGGTAGTAGGTTGTATT...............................................................................................................................................................................................................18183.008308201000000
.....................................................................TGAGGTAGTAGGTTGTATAGTTA...........................................................................................................................................................................................................23168.006802200010203130
.....................................................................TGAGGTAGTAGGTTGTATAGTAC...........................................................................................................................................................................................................23157.0057123030423030
....................................................................TTGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................21154.005405300000100
......................................................................GAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................20152.005205000002000
.....................................................................TGAGGTAGTAGGTTGTATC...............................................................................................................................................................................................................19148.0048023011086000
.....................................................................TGAGGTAGTAGGTTGTATAAA.............................................................................................................................................................................................................21142.0042013000918020
.....................................................................TGAGGTAGTAGGTTGTATAC..............................................................................................................................................................................................................20141.0041050170810010
.............................................................................................................TATACAATGTGCTAGCTTTCT.....................................................................................................................................................................21135.003503500000000
........................................................................GGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................19127.002701901001042
.....................................................................TGAGGTAGTAGGTTGTATAGAT............................................................................................................................................................................................................22126.002602010212531
.....................................................................TGAGGTAGTAGGTTGTAA................................................................................................................................................................................................................18126.002601701061100
.....................................................................TGAGGTAGTAGGTTGTATAGTTAA..........................................................................................................................................................................................................24126.002605000214212
.....................................................................TGAGGTAGTAGGTTGTATAGTTC...........................................................................................................................................................................................................23126.00260506038310
......................................................................GAGGTAGTAGGTTGTATAGTTT...........................................................................................................................................................................................................22125.002502400000010
.....................................................................TGAGGTAGTAGGTTGTATTA..............................................................................................................................................................................................................20224.5049026010616000
......................................................................GAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................22124.002401800033000
.....................................................................TGAGGTAGTAGGTTGTATCC..............................................................................................................................................................................................................20123.00230501098000
.....................................................................TGAGGTAGTAGGTTGTATAGTCC...........................................................................................................................................................................................................23123.002302080103000
............................................................................................................CTATACAATGTGCTAGCTTT.......................................................................................................................................................................20121.002102100000000
.......................................................................AGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................20119.001901900000000
....................................................................TTGAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................23117.001701700000000
.....................................................................TGAGGTAGTAGGTTGTAC................................................................................................................................................................................................................18114.001403011000000
............................................................................................................CTATACAATGTGCTAGCTTTCC.....................................................................................................................................................................22113.00130517000000
......................................................................GAGGTAGTAGGTTGTATAA..............................................................................................................................................................................................................19113.001301200010000
.....................................................................TGAGGTAGTAGGTTGTATCT..............................................................................................................................................................................................................20112.00120500025000
.....................................................................TGAGGTAGTAGGTTGTATG...............................................................................................................................................................................................................19112.00120701030100
.....................................................................TGAGGTAGTAGGTTGTATAGTGT...........................................................................................................................................................................................................23111.00110100054100
......................................................................GAGGTAGTAGGTTGTATAGC.............................................................................................................................................................................................................20110.00100163000000
.....................................................................TGAGGTAGTAGGTTGTATAGTAGTA.........................................................................................................................................................................................................25110.00100200023012
.........................................................................GTAGTAGGTTGTATAGTA............................................................................................................................................................................................................18110.001001000000000
droPer2
-TAAG----------------CCCAACAAAAAGGACCAGCACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTACTT-CA-GATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCTCA--TTTGAA-CAGCCCAGCCCCCCGCCCCGAACAGCTCCCGTACAGCTCCCGTACGCCCCCCCCCAGCTCCGAACAA--A----------------------G------------------------------------T---GTGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.....................................................................TGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................21281173.0016234647217212427383082967009
.....................................................................TGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................20241876.00837528125571257881947025928
.....................................................................TGAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................22217891.003578219556027297569217212
.....................................................................TGAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................2223102.506205012550131311882449
.....................................................................TGAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................2322285.504571032205857412923
......................................................................GAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................2021770.5035410144302833411474
.....................................................................TGAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................1921668.003336448001033936883
.....................................................................TGAGGTAGTAGGTTGTAT................................................................................................................................................................................................................1821250.502501340809331029128
......................................................................GAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................212968.001936050201911981045
.....................................................................TGAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................212803.00160601330303323847
......................................................................GAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................192564.001128075708377211
.....................................................................TGAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................232403.508070880118143458
.....................................................................TGAGGTAGTAGGTTGTATT...............................................................................................................................................................................................................192384.0076811730212205177
.....................................................................TGAGGTAGTAGGTTGTATAGTTT...........................................................................................................................................................................................................232284.50569092084111282
.....................................................................TGAGGTAGTAGGTTGTATAA..............................................................................................................................................................................................................202247.004940400126159169
.....................................................................TGAGGTAGTAGGTTGTATAGTAAA..........................................................................................................................................................................................................242202.5040502014266276
.....................................................................TGAGGTAGTAGGTTGTATAT..............................................................................................................................................................................................................202181.00362043012814249
......................................................................GAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................222174.0034803802542243
.....................................................................TGAGGTAGTAGGTTGTATAGC.............................................................................................................................................................................................................212160.503211909714470
.....................................................................TGAGGTAGTAGGTTGTATAGTC............................................................................................................................................................................................................222103.002064110475688
......................................................................GAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................21278.001560910111143
............................................................................................................CTATACAATGTGCTAGCTTTCT.....................................................................................................................................................................22276.00152060025607
.....................................................................TGAGGTAGTAGGTTGTATTT..............................................................................................................................................................................................................20275.001500300374142
.....................................................................TGAGGTAGTAGGTTGTATAGTG............................................................................................................................................................................................................22274.001480270564223
.....................................................................TGAGGTAGTAGGTTGTATAGG.............................................................................................................................................................................................................21266.501334160396410
.......................................................................AGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................19240.00800590885
.....................................................................TGAGGTAGTAGGTTGTATAC..............................................................................................................................................................................................................20238.007602036353
.....................................................................TGAGGTAGTAGGTTGTATAGTAG...........................................................................................................................................................................................................23230.50610100141621
.....................................................................TGAGGTAGTAGGTTGTATAGTTA...........................................................................................................................................................................................................23230.006006071136
.....................................................................TGAGGTAGTAGGTTGTATAGTAC...........................................................................................................................................................................................................23227.005401011933
........................................................................GGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................18225.5051012015618
.......................................................................AGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................18224.00480340536
......................................................................GAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................20222.504502005317
.......................................................................AGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................20220.00400330124
......................................................................GAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................18219.00380270326
.....................................................................TGAGGTAGTAGGTTGTATAAA.............................................................................................................................................................................................................21218.503702071315
.....................................................................TGAGGTAGTAGGTTGTATAGTTAA..........................................................................................................................................................................................................24217.50350201230
.....................................................................TGAGGTAGTAGGTTGTAGT...............................................................................................................................................................................................................19215.50310100030
............................................................................................................CTATACAATGTGCTAGCTTTC......................................................................................................................................................................21214.50290606170
.....................................................................TGAGGTAGTAGGTTGTAA................................................................................................................................................................................................................18213.50270409113
......................................................................GAGGTAGTAGGTTGTATAGTAAA..........................................................................................................................................................................................................23211.50230401117
.....................................................................TGAGGTAGTAGGTTGTATTA..............................................................................................................................................................................................................20211.5023020867
......................................................................GAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................22211.00220801013
....................................................................TTGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................2228.50170160010
.....................................................................TGAGGTAGTAGGTTGTATAGTAGT..........................................................................................................................................................................................................2427.5015020247
.....................................................................TGAGGTAGTAGGTTGTATAGTTC...........................................................................................................................................................................................................2327.5015000258
.....................................................................TGAGGTAGTAGGTTGTATAGAT............................................................................................................................................................................................................2227.5015010446
droWil2
-------------------------GCAAAAAGGACTA-CTTAAAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTATTCAATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCACAGATATGAT-C----------------------------------------------------------------TAA-A------------------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.....................................................................TGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................211597905.005979055285157359284851476457734
.....................................................................TGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................201129865.001298651103730726892361078569
.....................................................................TGAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................221114016.001140161223114924576639780698
.....................................................................TGAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................23123305.002330527711751042100219809
.....................................................................TGAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................19113863.001386336371188666238349
.....................................................................TGAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................2117285.007285491638494475615
.....................................................................TGAGGTAGTAGGTTGTAT................................................................................................................................................................................................................1816436.0064361581152778153235
.....................................................................TGAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................2214806.0048066571292369142474
......................................................................GAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................2013809.003809203336182433
.....................................................................TGAGGTAGTAGGTTGTATT...............................................................................................................................................................................................................1913256.00325685763422521538
.....................................................................TGAGGTAGTAGGTTGTATAGTAAA..........................................................................................................................................................................................................2412717.00271785153726731734
.....................................................................TGAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................2312683.0026837329716982136
.....................................................................TGAGGTAGTAGGTTGTATAGG.............................................................................................................................................................................................................2112297.0022972170294094
.....................................................................TGAGGTAGTAGGTTGTATAGC.............................................................................................................................................................................................................2112293.002293131435530891
......................................................................GAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................1911930.001930218348185
.....................................................................TGAGGTAGTAGGTTGTATAA..............................................................................................................................................................................................................2011905.00190530112132211610
......................................................................GAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................211999.0099949353057
............................................................................................................CTATACAATGTGCTAGCTTTCT.....................................................................................................................................................................221968.0096853186310716
.....................................................................TGAGGTAGTAGGTTGTATC...............................................................................................................................................................................................................191761.0076124742150457
.....................................................................TGAGGTAGTAGGTTGTATAGTAC...........................................................................................................................................................................................................231726.0072619830167475
.....................................................................TGAGGTAGTAGGTTGTATTT..............................................................................................................................................................................................................201724.0072421135590509
.....................................................................TGAGGTAGTAGGTTGTATAGTC............................................................................................................................................................................................................221646.0064611961221443
.....................................................................TGAGGTAGTAGGTTGTATAT..............................................................................................................................................................................................................201456.004561661354340
.....................................................................TGAGGTAGTAGGTTGTATCC..............................................................................................................................................................................................................201351.00351152770302
.....................................................................TGAGGTAGTAGGTTGTATAGTTT...........................................................................................................................................................................................................231322.0032233119221147
.......................................................................AGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................191256.00256381606052
.....................................................................TGAGGTAGTAGGTTGTATAGTG............................................................................................................................................................................................................221226.00226212682169
.....................................................................TGAGGTAGTAGGTTGTATAGTTC...........................................................................................................................................................................................................231210.00210231690162
.....................................................................TGAGGTAGTAGGTTGTATAAA.............................................................................................................................................................................................................211203.002031315713155
.....................................................................TGAGGTAGTAGGTTGTATAGTCC...........................................................................................................................................................................................................231185.0018583110145
.....................................................................TGAGGTAGTAGGTTGTATAGTAG...........................................................................................................................................................................................................231157.0015721321139
........................................................................GGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................181144.0014426692047
.....................................................................TGAGGTAGTAGGTTGTATAC..............................................................................................................................................................................................................201119.001193264077
.......................................................................AGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................181105.001054900011
.....................................................................TGAGGTAGTAGGTTGTATCCC.............................................................................................................................................................................................................21197.0097362086
.....................................................................TGAGGTAGTAGGTTGTATCT..............................................................................................................................................................................................................20191.009114101066
.....................................................................TGAGGTAGTAGGTTGTATAGTCCC..........................................................................................................................................................................................................24191.00913131074
......................................................................GAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................22181.00810570024
......................................................................GAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................18180.0080172007
............................................................................................................CTATACAATGTGCTAGCTTTC......................................................................................................................................................................21175.00756161052
......................................................................GAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................21161.0061156202
.......................................................................AGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................20159.0059153005
.....................................................................TGAGGTAGTAGGTTGTATG...............................................................................................................................................................................................................19158.005814113030
.....................................................................TGAGGTAGTAGGTTGTAGT...............................................................................................................................................................................................................19457.7523117170206
.....................................................................TGAGGTAGTAGGTTGTATAGTTCC..........................................................................................................................................................................................................24155.00551341037
....................................................................TTGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................22152.0052046006
.....................................................................TGAGGTAGTAGGTTGTAC................................................................................................................................................................................................................18150.0050461003
.....................................................................TGAGGTAGTAGGTTGTATTA..............................................................................................................................................................................................................20249.509912116070
......................................................................GAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................20148.0048042006
.....................................................................TGAGGTAGTAGGTTGTATAGTATC..........................................................................................................................................................................................................24146.00461750024
......................................................................GAGGTAGTAGGTTGTATT...............................................................................................................................................................................................................18144.0044043001
.....................................................................TGAGGTAGTAGGTTGTATAGTAAC..........................................................................................................................................................................................................24140.0040610429
.....................................................................TGAGGTAGTAGGTTGTATAGTTA...........................................................................................................................................................................................................23138.0038284024
....................................................................TTGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................21134.0034034000
.....................................................................TGAGGTAGTAGGTTGTAA................................................................................................................................................................................................................18232.506514203127
........................................................................GGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................19130.0030416109
.....................................................................TGAGGTAGTAGGTTGTATAGAT............................................................................................................................................................................................................22129.0029004025
.....................................................................TGAGGTAGTAGGTTGTATATA.............................................................................................................................................................................................................21129.0029041024
.....................................................................TGAGGTAGTAGGTTGTATTC..............................................................................................................................................................................................................20127.0027020025
.........................................................................GTAGTAGGTTGTATAGTA............................................................................................................................................................................................................18124.0024213009
.....................................................................TGAGGTAGTAGGTTGTATAGTAAG..........................................................................................................................................................................................................24121.0021200217
.....................................................................TGAGGTAGTAGGTTGTATAGTCA...........................................................................................................................................................................................................23120.0020021116
droVir3
--------------------------CAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTATTTATA-GAGCATACTATACAGCGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCA--AAGAAAAC----------------------------------------------------------------CA--A---------------------------CCCCCCCA-------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.....................................................................TGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................211386682.00386682148965574240972168485018537152364317007180942619292216541168263611344804823408116714358422440677476551019331258129130279792243932317241872750540000000000000101153331737902684441341376245576652277128747547751946881611716381390288395
.....................................................................TGAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................221175154.001751545192259133234118018665354952272372871258245154192272216216843581947327326216602745269647354314944412434466815352720441129335622530000000000000003171175883187143610551323361686492903011637852216929191885489
.....................................................................TGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................201134169.0013416932716901648625572049395122532237442540523793221113663364177869122837544792129477570114239559706116114744128718176313511215221600000000000000000062021695816515215348233311357476943137753441210153159135161
.....................................................................TGAGGTAGTAGGTTGTATAGTC............................................................................................................................................................................................................22174129.0074129153515872842332818622031678845411603113215234901004126976366245818022434226663977843286395630272420007429350000000000000001011903509596407172530155524231644187426602285122241311
.....................................................................TGAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................23125479.0025479269990801153454750532111341674136555260192529187179452130111514736337476056615281792712239130476127111697462000000000000000006079605108617913841327310476145299231259558884240
.....................................................................TGAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................1918140.008140657357190511521942355432550001236753132542794221901113839643332041321844009000007106000000000000000001100969106801221010100216601188911208224
.....................................................................TGAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................2317523.00752353446001811576436288191001326648168604216831443216162148845928372638863212120225186000000000000000005004061222058666512835201211231711610
.....................................................................TGAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................2217321.0073213417111091196064916170800015786721818545874038634645271643445481896112102110018720000000000000000012506901145047780007010047564150171034
.....................................................................TGAGGTAGTAGGTTGTATAGTCC...........................................................................................................................................................................................................2314731.00473182181160181384012011000660043233225274111210313474218617030700005303000000000000000004300193390630001582201969827720303322
.....................................................................TGAGGTAGTAGGTTGTAT................................................................................................................................................................................................................1814719.00471949287707113441346261151300045292474241250102465230236437224422158379053100010320000000000000000060010857910501023622629443202236
............................................................................................................CTATACAGCGTGCTAGCTTTCT.....................................................................................................................................................................2213811.003811131780172132170213630001997545105131522751701172178679110761518652150014220003052240000000000000000000183920285500054733100000
......................................................................GAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................2013321.0033210231206120121100000000000607432132910160400000200000000000000000000354600000011013100100
.....................................................................TGAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................2113169.003169171163641647720720262150002522162381483771516111629611443100020000052300000000000000000311389856012114431442915181623956
.....................................................................TGAGGTAGTAGGTTGTATAGTAAA..........................................................................................................................................................................................................2412534.0025344319607181532279151263331393191717779527216338889748159212113191582400000000000000000006604620567647110669915484453766664344
.....................................................................TGAGGTAGTAGGTTGTATAGTCT...........................................................................................................................................................................................................2312178.002178722870563213182200033140110201479111272222991043740133000001070000000000000000070015142041310129402426473603300
.....................................................................TGAGGTAGTAGGTTGTATAA..............................................................................................................................................................................................................2011346.0013461187203273387454010392694621918857126461256613573011001021800000000000000000000214353001100411015500101
.....................................................................TGAGGTAGTAGGTTGTATAGTAC...........................................................................................................................................................................................................2311158.00115823322002294391655800085182127317476792750235902000002200000000000000000010116580000009213850627612800101
......................................................................GAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................1911128.001128001064002000000001000111012101138390100000200000000000000000000111001200000100001000
......................................................................GAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................2111008.0010080091800102242000010010002101245321501000005000000000000000000004904000047035000000
.....................................................................TGAGGTAGTAGGTTGTATAGC.............................................................................................................................................................................................................211922.00922352521311107181255000696551376239455420211541071000110000000000000000000002158101500024013100000
.....................................................................TGAGGTAGTAGGTTGTATAGTTC...........................................................................................................................................................................................................231857.008575111505183009100004103423404110117112242165090000025600000000000000000000661020000460147400010
.....................................................................TGAGGTAGTAGGTTGTATAGTTT...........................................................................................................................................................................................................231817.0081758120024010111000252012341410947439011632582348010000018000000000000000002007814405600073023202000
.....................................................................TGAGGTAGTAGGTTGTATAGG.............................................................................................................................................................................................................211774.007741174741100001711140000100008023000041020000000300000000000000000000583003200074512300000
.....................................................................TGAGGTAGTAGGTTGTATT...............................................................................................................................................................................................................191683.006839129131013051130000561860425421111123923010000040000000000000000030013010800100059556200000
.....................................................................TGAGGTAGTAGGTTGTATC...............................................................................................................................................................................................................191588.00588445145011320029400054322062134312220601527014000001900000000000000000500209400201061452420400000
.....................................................................TGAGGTAGTAGGTTGTATAGTCA...........................................................................................................................................................................................................231509.00509003704600031000402300330134481345172189202100103250000000000000000000094704312023643001101
.....................................................................TGAGGTAGTAGGTTGTATCC..............................................................................................................................................................................................................201380.003805328028101391000420140102362231173982801400000140000000000000000030086300000081071191300000
.....................................................................TGAGGTAGTAGGTTGTATAT..............................................................................................................................................................................................................201373.003731334015222220000585126464176010092082001400001500000000000000000000766600000001114100000
.......................................................................AGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................191368.0036803307011032500000000003022101251203000000000000000000000000010031000000001000000000
........................................................................GGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................181347.0034702203058223536300000000030131021233507000013000000000000000000009103300061100100000
.....................................................................TGAGGTAGTAGGTTGTATAGTAG...........................................................................................................................................................................................................231256.002560229012042800102102123081344619268261301101600000000000000000000213201210053053200120
.....................................................................TGAGGTAGTAGGTTGTATAGTG............................................................................................................................................................................................................221238.00238352802571321210003224007054102083180100000400000000000000000000473402100013142801100
............................................................................................................CTATACAGCGTGCTAGCTTTC......................................................................................................................................................................211236.002360017043110100000116289122881453118471309000014190000000000000000000091500300000000000000
......................................................................GAGGTAGTAGGTTGTATAGTC............................................................................................................................................................................................................211230.00230001910010002100000000060010000581502000001000000000000000000001200000000011100000
.....................................................................TGAGGTAGTAGGTTGTATAAA.............................................................................................................................................................................................................211155.001551630000621140003223112061014256151100000000000000000000000100204200320010000310110
.....................................................................TGAGGTAGTAGGTTGTA.................................................................................................................................................................................................................171131.00131000000000000000000000000000000000000000000000000000000000180099001510000000002032
.....................................................................TGAGGTAGTAGGTTGTATAC..............................................................................................................................................................................................................201127.00127111400110002000210100504100001512010000000000000000000000010061500000015015300001
.....................................................................TGAGGTAGTAGGTTGTATAGTAAC..........................................................................................................................................................................................................241127.00127631000011000003001001020001112241100000000000000000000000001060001001026610112003010
.....................................................................TGAGGTAGTAGGTTGTATAGTTA...........................................................................................................................................................................................................231102.00102057000000300002123103010000003915070000020000000000000000000082500000010210100000
.....................................................................TGAGGTAGTAGGTTGTATAGCC............................................................................................................................................................................................................22193.0093302002010111000000001190110000264807000008000000000000000001006800000000000100000
.......................................................................AGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................18191.009102680010101000000001010020010360000000000000000000000000000002200000000000000000
......................................................................GAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................21184.008400790000000000010000000000000000100000000000000000000000000002100000000000000000
........................................................................GGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................19181.008111800707915300000000030011120021102000006000000000000000000000000000014020300000
.......................................................................AGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................20180.008011510111003100000000000120000251303000000000000000000000000002100000000000000000
......................................................................GAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................22179.007900680000001000000010010001000120001000000000000000000000000000300000000000000000
........................................................................GGTAGTAGGTTGTATAGTC............................................................................................................................................................................................................19176.007600001700045000000000040000000131004000004000000000000000000001100000002011000000
.....................................................................TGAGGTAGTAGGTTGTATAGTATC..........................................................................................................................................................................................................24176.00763430030000000000010020100000574700000004000000000000000000000500000042148800000
......................................................................GAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................18172.007210620000000000000000010200000020000000000000000000000000000004000000000000000000
.....................................................................TGAGGTAGTAGGTTGTATTT..............................................................................................................................................................................................................20261.001221327002010000004223100170000012050100000000000000000000000100243100000020000000001
....................................................................TTGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................22159.005900530000000000000000000000000021100000000000000000000000000001000000000000001000
..........................................................................TAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................18157.0057000001312615300000011040000000000205000004000000000000000000000000000000000000000
.........................................................................GTAGTAGGTTGTATAGTA............................................................................................................................................................................................................18156.00560070161901000000020040010010162202000001000000000000000000001000000023002100000
.....................................................................TGAGGTAGTAGGTTGTATAGTATA..........................................................................................................................................................................................................24149.00490420000001000010301020200000611301020000000000000000000000004300002041010000022
.....................................................................TGAGGTAGTAGGTTGTATCT..............................................................................................................................................................................................................20149.004901900001070000100000001100003131010000000000000000000000000011200000010101300000
............................................................................................................CTATACAGCGTGCTAGCTTT.......................................................................................................................................................................20145.00450080201000000030321011020100410600000022000000000000000000003100100000000000000
.....................................................................TGAGGTAGTAGGTTGTATTC..............................................................................................................................................................................................................20143.004310200000140000000010011000002311000000030000000000000000000031100000020212100000
.....................................................................TGAGGTAGTAGGTTGTATAGAC............................................................................................................................................................................................................22142.00424820011000000000000060000020221000000001000000000000000000003500000001002100000
.....................................................................TGAGGTAGTAGGTTGTATAGTTAA..........................................................................................................................................................................................................24141.00410270000000000031210000200000711200000001000000000000000000003501000000000002000
.........................................................................GTAGTAGGTTGTATAGTC............................................................................................................................................................................................................18141.004120100100014000000000040100000250305000002000000000000000000000000000000010000000
.............................................................................................................TATACAGCGTGCTAGCTTTCT.....................................................................................................................................................................21141.004100130001000000030022020100110110003000023000000000000000000001000400000000000000
......................................................................GAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................22137.003700330000000000000000000000000000000000000000000000000000000001300000000000000000
.....................................................................TGAGGTAGTAGGTTGTATTA..............................................................................................................................................................................................................20136.003613601201011000000110000000001100000000000000000000000000000051000000001000000000
.....................................................................TGAGGTAGTAGGTTGTATAGTCAA..........................................................................................................................................................................................................24135.00350010000001000000110000000210330200000012000000000000000000000300000152201110100
............................................................................................................CTATACAGCGTGCTAGCTTTCTC....................................................................................................................................................................23133.00330010130000000000020050120000432200000006000000000000000000000001000000000000000
droMoj3
ACATA--AACCAA--------GCAAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTACTTATA-GACCATACTATACAGCGTGCTAGCTTTCTTTGCTTGACTATAAGCCGCA-------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.....................................................................TGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................211315102.0031510212742432268543234347128402
.....................................................................TGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................20190378.009037843801111099412201523366
.....................................................................TGAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................22186171.008617135430103592375008937126
.....................................................................TGAGGTAGTAGGTTGTATAGTC............................................................................................................................................................................................................22140845.0040845111911146219211026260
.....................................................................TGAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................23113754.001375423176865126629298
......................................................................GAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................2018445.00844582130161969128
.....................................................................TGAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................2217954.0079543691162683002806
.....................................................................TGAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................1914426.0044261396047859811953
.....................................................................TGAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................2314017.004017947030245712310
.....................................................................TGAGGTAGTAGGTTGTAT................................................................................................................................................................................................................1813283.003283122607509300377
......................................................................GAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................1912570.0025702531096123
.....................................................................TGAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................2112447.002447728022830601185
......................................................................GAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................2112311.0023112264046037
.....................................................................TGAGGTAGTAGGTTGTATAGTCT...........................................................................................................................................................................................................2311519.001519457038770947
.....................................................................TGAGGTAGTAGGTTGTATAGC.............................................................................................................................................................................................................2111512.0015123970951539858
.....................................................................TGAGGTAGTAGGTTGTATAGTCA...........................................................................................................................................................................................................2311311.001311371080870773
.....................................................................TGAGGTAGTAGGTTGTATC...............................................................................................................................................................................................................1911112.001112188060630801
.....................................................................TGAGGTAGTAGGTTGTATAGTAAA..........................................................................................................................................................................................................241983.009831252601060690
.....................................................................TGAGGTAGTAGGTTGTATAGTCC...........................................................................................................................................................................................................231947.00947287050430567
.....................................................................TGAGGTAGTAGGTTGTATT...............................................................................................................................................................................................................191946.0094627901331690365
.....................................................................TGAGGTAGTAGGTTGTATAGTTC...........................................................................................................................................................................................................231779.00779135121300592
.....................................................................TGAGGTAGTAGGTTGTATAA..............................................................................................................................................................................................................201753.0075313701021040410
.....................................................................TGAGGTAGTAGGTTGTATAGTTT...........................................................................................................................................................................................................231705.00705242059840320
......................................................................GAGGTAGTAGGTTGTATAGTC............................................................................................................................................................................................................211673.00673635022034
............................................................................................................CTATACAGCGTGCTAGCTTTCT.....................................................................................................................................................................221640.00640260610713325109
.....................................................................TGAGGTAGTAGGTTGTATAT..............................................................................................................................................................................................................201626.006261150246950170
.......................................................................AGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................191562.005625120422618
.....................................................................TGAGGTAGTAGGTTGTATAGTCTC..........................................................................................................................................................................................................241443.0044381014260322
.....................................................................TGAGGTAGTAGGTTGTATAGTAC...........................................................................................................................................................................................................231314.0031476022250191
.....................................................................TGAGGTAGTAGGTTGTATAGTG............................................................................................................................................................................................................221263.002638715445076
........................................................................GGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................181257.002572030752715
......................................................................GAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................211224.0022422100003
.....................................................................TGAGGTAGTAGGTTGTATAGTATC..........................................................................................................................................................................................................241206.00206290450168
.....................................................................TGAGGTAGTAGGTTGTATCC..............................................................................................................................................................................................................201191.0019137012160126
......................................................................GAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................221172.00172159002011
.....................................................................TGAGGTAGTAGGTTGTATAGG.............................................................................................................................................................................................................211141.001414704042012
.....................................................................TGAGGTAGTAGGTTGTATCT..............................................................................................................................................................................................................201134.0013423088095
.....................................................................TGAGGTAGTAGGTTGTATAGCC............................................................................................................................................................................................................221131.00131520720052
....................................................................TTGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................221115.0011511500000
.......................................................................AGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................181110.0011010700300
.......................................................................AGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................201102.001029500115
.....................................................................TGAGGTAGTAGGTTGTATAGTAG...........................................................................................................................................................................................................23195.00953701512031
.....................................................................TGAGGTAGTAGGTTGTATTC..............................................................................................................................................................................................................20194.009411029072
.....................................................................TGAGGTAGTAGGTTGTATAGTTA...........................................................................................................................................................................................................23193.00932501510043
.....................................................................TGAGGTAGTAGGTTGTATTT..............................................................................................................................................................................................................20385.0025562029440120
......................................................................GAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................18182.00827901011
............................................................................................................CTATACAGCGTGCTAGCTTTC......................................................................................................................................................................21181.00812601714420
.....................................................................TGAGGTAGTAGGTTGTATAAA.............................................................................................................................................................................................................21173.007313059145
.....................................................................TGAGGTAGTAGGTTGTATAGTCAA..........................................................................................................................................................................................................24161.00618063044
......................................................................GAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................22158.00585500102
.....................................................................TGAGGTAGTAGGTTGTATAC..............................................................................................................................................................................................................20155.005580912026
......................................................................GAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................20152.00524901101
.....................................................................TGAGGTAGTAGGTTGTATCA..............................................................................................................................................................................................................20147.00479052031
....................................................................TTGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................21144.00444400000
.....................................................................TGAGGTAGTAGGTTGTAA................................................................................................................................................................................................................18143.0043100121605
.....................................................................TGAGGTAGTAGGTTGTATATC.............................................................................................................................................................................................................21141.004110047020
.....................................................................TGAGGTAGTAGGTTGTATTA..............................................................................................................................................................................................................20141.004112034022
.....................................................................TGAGGTAGTAGGTTGTATAGTTTC..........................................................................................................................................................................................................24140.00409010030
......................................................................GAGGTAGTAGGTTGTATAGC.............................................................................................................................................................................................................20140.004028000111
......................................................................GAGGTAGTAGGTTGTATAGTCT...........................................................................................................................................................................................................22131.00313100000
.....................................................................TGAGGTAGTAGGTTGTATAGTCCC..........................................................................................................................................................................................................24131.00316032020
.....................................................................TGAGGTAGTAGGTTGTA.................................................................................................................................................................................................................17130.00300003000
.......................................................................AGGTAGTAGGTTGTATAGTC............................................................................................................................................................................................................20130.00302800101
.....................................................................TGAGGTAGTAGGTTGTATAGTTAA..........................................................................................................................................................................................................24127.00272034018
....................................................................TTGAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................23127.00272700000
........................................................................GGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................19127.00272100204
.....................................................................TGAGGTAGTAGGTTGTATAGTGA...........................................................................................................................................................................................................23126.00262064014
............................................................................................................CTATACAGCGTGCTAGCTTTCTC....................................................................................................................................................................23126.00267111115
.....................................................................TGAGGTAGTAGGTTGTATAGCT............................................................................................................................................................................................................22124.00243024015
.....................................................................TGAGGTAGTAGGTTGTATAGTATCC.........................................................................................................................................................................................................25124.00248012013
............................................................................................................CTATACAGCGTGCTAGCTTT.......................................................................................................................................................................20123.0023901616
.............................................................................................................TATACAGCGTGCTAGCTTTCT.....................................................................................................................................................................21122.00222001001
droGri2
------------AAC----CAGCAAGCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTATCTATC-TAGCATACTATACAGCTTGCTAGCTTTCTTTGCTTGACTATAAGCAGCA--TAGAA--C----------------------------------------------------------------GA--AACCCTCTCACACACTGAAAAAAAAA------------------ACACCAC-----TGAAT---CTCSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.....................................................................TGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................21216453.00329061882614080
.....................................................................TGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................20210239.5020479136936786
.....................................................................TGAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................2222998.00599633612635
.....................................................................TGAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................2221223.5024471681766
......................................................................GAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................202642.001284127311
.....................................................................TGAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................192547.501095606489
......................................................................GAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................192446.008928884
.....................................................................TGAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................232336.00672135537
.....................................................................TGAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................212287.00574209365
.....................................................................TGAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................232239.00478207271
.....................................................................TGAGGTAGTAGGTTGTAT................................................................................................................................................................................................................182210.0042037941
.....................................................................TGAGGTAGTAGGTTGTATAGTTT...........................................................................................................................................................................................................232141.5028320182
......................................................................GAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................212118.002362333
.....................................................................TGAGGTAGTAGGTTGTATT...............................................................................................................................................................................................................19281.001628973
......................................................................GAGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................21261.001221220
.....................................................................TGAGGTAGTAGGTTGTATAA..............................................................................................................................................................................................................20256.001122290
.......................................................................AGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................19238.0076751
............................................................................................................CTATACAGCTTGCTAGCTTTCT.....................................................................................................................................................................22233.0066633
.....................................................................TGAGGTAGTAGGTTGTATAGTAAA..........................................................................................................................................................................................................24228.5057651
.....................................................................TGAGGTAGTAGGTTGTATAT..............................................................................................................................................................................................................20228.50571839
.....................................................................TGAGGTAGTAGGTTGTATAGTG............................................................................................................................................................................................................22222.00443311
.....................................................................TGAGGTAGTAGGTTGTATAGC.............................................................................................................................................................................................................21220.50411625
.....................................................................TGAGGTAGTAGGTTGTATAGTC............................................................................................................................................................................................................22218.50371126
.....................................................................TGAGGTAGTAGGTTGTATAGG.............................................................................................................................................................................................................21218.0036324
......................................................................GAGGTAGTAGGTTGTATA...............................................................................................................................................................................................................18216.0032320
.......................................................................AGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................18215.5031310
.....................................................................TGAGGTAGTAGGTTGTATTT..............................................................................................................................................................................................................20215.00301713
........................................................................GGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................18214.5029290
....................................................................TTGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................22211.0022220
.....................................................................TGAGGTAGTAGGTTGTATAGTAC...........................................................................................................................................................................................................23210.0020713
....................................................................TTGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................2129.5019190
.....................................................................TGAGGTAGTAGGTTGTATAGAT............................................................................................................................................................................................................2228.5017512
.....................................................................TGAGGTAGTAGGTTGTATAGTTA...........................................................................................................................................................................................................2328.5017116
......................................................................GAGGTAGTAGGTTGTATAGTAT...........................................................................................................................................................................................................2228.0016160
......................................................................GAGGTAGTAGGTTGTATAGTTT...........................................................................................................................................................................................................2228.0016160
......................................................................GAGGTAGTAGGTTGTATAGA.............................................................................................................................................................................................................2027.5015141
.....................................................................TGAGGTAGTAGGTTGTATAAA.............................................................................................................................................................................................................2126.5013310
............................................................................................................CTATACAGCTTGCTAGCTTTC......................................................................................................................................................................2124.50990
.....................................................................TGAGGTAGTAGGTTGTATC...............................................................................................................................................................................................................1924.00817
......................................................................GAGGTAGTAGGTTGTATAGTAA...........................................................................................................................................................................................................2224.00880
.....................................................................TGAGGTAGTAGGTTGTATAC..............................................................................................................................................................................................................2024.00826
.....................................................................TGAGGTAGTAGGTTGTATAGTAG...........................................................................................................................................................................................................2324.00862
......................................................................GAGGTAGTAGGTTGTATT...............................................................................................................................................................................................................1823.50770
.....................................................................TGAGGTAGTAGGTTGTATAGTTAA..........................................................................................................................................................................................................2423.00624
.......................................................................AGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................2023.00660
.......................................................................AGGTAGTAGGTTGTATAGTT............................................................................................................................................................................................................2022.50550
.....................................................................TGAGGTAGTAGGTTGTATAGTTC...........................................................................................................................................................................................................2322.50532
.....................................................................TGAGGTAGTAGGTTGTATAGGC............................................................................................................................................................................................................2222.50550
.....................................................................TGAGGTAGTAGGTTGTATAGTACA..........................................................................................................................................................................................................2422.00413
.............................................................................................................TATACAGCTTGCTAGCTTTCT.....................................................................................................................................................................2122.00440
...................................................................ATTGAGGTAGTAGGTTGTATAGT.............................................................................................................................................................................................................2322.00440
....................................................................TTGAGGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................2322.00440
.....................................................................TGAGGTAGTAGGTTGTAGT...............................................................................................................................................................................................................1922.00404
.....................................................................TGAGGTAGTAGGTTGTATAGTGA...........................................................................................................................................................................................................2321.50312
.....................................................................TGAGGTAGTAGGTTGTATTA..............................................................................................................................................................................................................2021.50312
.....................................................................TGAGGTAGTAGGTTGTATAGTCA...........................................................................................................................................................................................................2321.50312
.....................................................................TGAGGTAGTAGGTTGTATAGTCT...........................................................................................................................................................................................................2321.50330
......................................................................GAGGTAGTAGGTTGTATAT..............................................................................................................................................................................................................1921.50330
......................................................................GAGGTAGTAGGTTGTATAGTG............................................................................................................................................................................................................2121.50330
.....................................................................TGAGGTAGTAGGTTGTATAGGCA...........................................................................................................................................................................................................2321.50330
.....................................................................TGAGGTAGTAGGTTGTATAGGG............................................................................................................................................................................................................2221.50330
.....................................................................TGAGGTAGTAGGTTGTATG...............................................................................................................................................................................................................1921.00202
...................................................................ATTGAGGTAGTAGGTTGTATAG..............................................................................................................................................................................................................2221.00220
.....................................................................TGAGGTAGTAGGTTGTATCC..............................................................................................................................................................................................................2021.00202
......................................................................GAGGTAGTAGGTTGTATAGTAG...........................................................................................................................................................................................................2221.00220
.....................................................................TGAGGTAGTAGGTTGTATATG.............................................................................................................................................................................................................2121.00220
.....................................................................TGAGGTAGTAGGTTGTATAGGGA...........................................................................................................................................................................................................2321.00220
........................................................................GGTAGTAGGTTGTATAGTA............................................................................................................................................................................................................1921.00220
.....................................................................TGAGGTAGTAGGTTGTAAT...............................................................................................................................................................................................................1921.00202
.....................................................................TGAGGTAGTAGGTTGTAA................................................................................................................................................................................................................1821.00202

Generated: 10/20/2015 at 07:29 PM