ID:

dps_970

 Coordinate:

3:2503789-2503939 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.0 -19.7 -19.6

Flybase annnotation

exon [dpse_GLEANR_15184:5]; CDS [Dpse\GA13475-cds]; intron [Dpse\GA13475-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GAACATTCAGGACTCTGCCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTGATTAACAAAAAGAGTTTACTTTTAAGTTGAACGGTTTCTGATTTTGGTTCCAATCACTGGCCAATACATAGATAGCCTTAATATTTGAGTAATTTCTAACACGTTCTTCGTACTCTCTCTTTTTGCTACATCAATTTCGTTTTGTTTACGTTTCTCCAATCCTTCCGCGCAACACAGTAGCT
******************************************************..((((((..(((((.....)))))))))))(((((....(((((..((((((((...((((..(((.....)))))))....)))).)))))))))....)))))******************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M059
embryo
 M040
female body
 GSM343916
embryo
 M062
head
 SRR902010
ovaries
...........................................................................................................................................GATAGCCTTAATATTTGAGTA........................................................................................... 21 0 1 3.00 3 0 0 3 0 0
......................................................ATAGCTCTCGTTTTGATTAACAAAAAGA......................................................................................................................................................................... 28 0 1 3.00 3 3 0 0 0 0
..........................................................................................................CTGATTTTGGTTCCAATCACTGGCCA....................................................................................................................... 26 0 1 2.00 2 1 1 0 0 0
....................................................................................................................................ATACATAGATAGCCTTAATATTTGAGT............................................................................................ 27 0 1 2.00 2 1 1 0 0 0
......................GATGACATGACCGAGAAGGTT................................................................................................................................................................................................................ 21 0 1 2.00 2 0 0 2 0 0
......................................................ATAGCTCTCGTTTTGATTAACAAAAAG.......................................................................................................................................................................... 27 0 1 2.00 2 1 0 1 0 0
..........GACTCTGCCTTCGATGACAT............................................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0
.....................CGATGACATGACCGAGAAGGTT................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0
..................CTTCGATGACATGACCGAGAAGGT................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0
......................................................................................................................................................................................................................TTATGTTTCTCCAATCCTTCCGCGC............ 25 1 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................ATTTCGTTTTGTTTACGTTTCTCCAATCC.................... 29 0 1 1.00 1 1 0 0 0 0
.....................................................AATAGCTCTCGTTTTGATTAACA............................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
...................................................................................TTTACTTTTAAGTTGAACG..................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................................GATAGCCTTAATTTTTGAGT............................................................................................ 20 1 1 1.00 1 0 0 1 0 0
..................................................................................................................................................................TTCTAACACGTTCTTCGTACTCT.................................................................. 23 0 1 1.00 1 0 0 0 0 1
................................................................................................................................................................ATTTCTAACACGTTCTTCG........................................................................ 19 0 1 1.00 1 0 1 0 0 0
.......................................................................................................................................................ATTTGAGTAATTTCTAACACGT.............................................................................. 22 0 1 1.00 1 1 0 0 0 0
..................................................................................................................GGTTCCAATCACTGGCCAATACATA................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0
...........................................................................................................TGATTTTGGTTCCAATCACTGGCCA....................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
............................................................................................................................................ATAGCCTTAATATTTGAGT............................................................................................ 19 0 1 1.00 1 1 0 0 0 0
..................................................................................................AACGGTTTCTGATTTTGGTT..................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.....................CGATGACATGACCGAGAAGGTTTAC............................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
........................................................AGCTCTCGTTTTGATTAACAAAAAGA......................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
....................................................AAATAGCTCTCGTTTTGATTAACAAAAA........................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0
..........................................................................................................................................................................................................................GTTTCTCCAATCCTTCCGCGC............ 21 0 1 1.00 1 0 0 1 0 0
....................................................................................................................................................................CTAACACGTTCTTCGTACTCTCTCTTTTT.......................................................... 29 0 1 1.00 1 1 0 0 0 0
..........................................TTACAAAAGTAAATAGCTCTCGT.......................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................TCTTCGTACTCTCTCTTTTTGC........................................................ 22 0 1 1.00 1 0 0 0 1 0
......................................................................................................................................................................................................................TTACGTTTCTCCAATCCTTCCGCGC............ 25 0 1 1.00 1 1 0 0 0 0
.............TCTGCCTTCGATGACATGACCGAGA..................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................................................................................TTTACGTTTCTCCAATCCTTCCGC.............. 24 0 1 1.00 1 0 1 0 0 0
..........GACTCTGCCTTCGATGACATGACCGA....................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
............................................................................................................................................................................................................................TTCTCCAATCCTTCCGCGCAACACA...... 25 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................ATACATAGATAGCCTTAATATTTGAGC............................................................................................ 27 1 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................TACGTTTCTCCAATCCTTCCGCGC............ 24 0 1 1.00 1 1 0 0 0 0
......................................................................................ACCTTTAAGTTGAACGGTTTCTGAT............................................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0
.....................................................................................................GGTTTCTGATTTTGGTTCCAATCACT............................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
....................................................................................TTACTTTTAAGTTGAACGGTTTCC............................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
.....................................................AATAGCTCTCGTTTTGATTAAC................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................CAATACATAGATAGCCTTA...................................................................................................... 19 0 1 1.00 1 0 1 0 0 0
.....TTCAGGACTCTGCCTTCGATGACATG............................................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0
................................................................................................................................................................................................TGCTACATCAATTTCGTTTTGTT.................................... 23 0 1 1.00 1 0 1 0 0 0
..............CTGCCTTCGATGACATGACCGAGAAGGC................................................................................................................................................................................................................. 28 1 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................AATTTCTAACACGTTCTTCGTACTCTC................................................................. 27 0 1 1.00 1 1 0 0 0 0
...TATTCAGGACTCTGCCTTCGAT.................................................................................................................................................................................................................................. 22 1 1 1.00 1 0 1 0 0 0
..ACATTCAGGACTCTGCCTTC..................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
..................................................GTAAATAGCTCTCGTTTTGATTAACAAA............................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0
.......CAGGACTCTGCCTTCGATGAC............................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.........................................................GCTCTCGTTTTGATTAACAAAAAGA......................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
.......................................................................................................TTTCTTATTTTGGTTCCAATCACTGGCC........................................................................................................................ 28 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................ACGTTTCTCCAATCCTTCCG............... 20 0 1 1.00 1 0 0 1 0 0
.................................................................................................................................................................TTTCTGACACGTACGTCGT....................................................................... 19 3 8 0.13 1 0 1 0 0 0
.......................................................................................................................................................................CCACGGGCTTCGTACTCTCT................................................................ 20 3 9 0.11 1 0 0 1 0 0
.......................ATGACAGGACCGAGAGGCT................................................................................................................................................................................................................. 19 3 12 0.08 1 0 1 0 0 0

Anti-sense strand reads

CTTGTAAGTCCTGAGACGGAAGCTACTGTACTGGCTCTTCCAAATGTTTTCATTTATCGAGAGCAAAACTAATTGTTTTTCTCAAATGAAAATTCAACTTGCCAAAGACTAAAACCAAGGTTAGTGACCGGTTATGTATCTATCGGAATTATAAACTCATTAAAGATTGTGCAAGAAGCATGAGAGAGAAAAACGATGTAGTTAAAGCAAAACAAATGCAAAGAGGTTAGGAAGGCGCGTTGTGTCATCGA
*******************************************************************************************..((((((..(((((.....)))))))))))(((((....(((((..((((((((...((((..(((.....)))))))....)))).)))))))))....)))))****************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 GSM444067
head
 SRR902011
testis
 M062
head
............................................................................................................CTAAAACCAAGGTTAGTGACCGG........................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
....................................................................................................GCCAAAGACTAAAACCAAGG................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................GAGAAAAACGGTGTAGTTA............................................... 19 1 1 1.00 1 0 1 0 0 0
................................................................................................................................................................................................................................GGTTAGGGAGGCGCGTTGTGT...... 21 1 1 1.00 1 0 0 0 1 0
.....................................................................................................CCAAAGACTAAAACCAAGG................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................................TGAAGGCGCGTTGTGTTATC.. 20 2 1 1.00 1 0 0 1 0 0
.....................................................................................................................................................................................................GTAGTTATAGCAAACAAAATG................................. 21 3 5 0.20 1 1 0 0 0 0
...............................................................................................................................................................TTAAAGATTGTAGAAGAATCA....................................................................... 21 3 6 0.17 1 1 0 0 0 0
............................................................................................................................................................................AAGAAGTATGAGAGGTAAAAA.......................................................... 21 3 9 0.11 1 0 1 0 0 0
..........................GGTACTGGCTCCTTCAAATG............................................................................................................................................................................................................. 20 3 19 0.05 1 0 0 0 0 1
.................................................................................................................................................................AAAGACTGTGCATGCAGC........................................................................ 18 3 20 0.05 1 1 0 0 0 0
....................................................................................................................................................TTATTAATTCATTAAAGAATG.................................................................................. 21 3 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 3:2503739-2503989 + dps_970 GAACATTCAGGACTCTGCCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAC------------------------------GGT----TTCTG---ATTTTGGTTCC-AAT----CA------CTGGCCAA--------------------TA-CATAGA--------------------TAGCCTTA-ATAT-TTGA-GTAATTTCT-AAC-------ACGTTCTTCGTAC----TCT------------CTC------------TTTTTGCTACA---T----------CAATTTCGT------TTTGTTTACGTTTCTCC------AAT--C-CT--------------T--------------CCGCGCA-ACACAGTA-------------------GCT
droPer2 scaffold_2:2692893-2693143 + dpe_1038 GAACATTCAGGACTCTGCCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAC------------------------------GGT----TTCTG---ATTTTGGTTCC-AAT----CA------CTGGCCAA--------------------TA-CATAGA--------------------TAGCCTTA-ATAT-TTGA-GTAATTTCA-AAC-------ACGTTCTTCGTAC----TCT------------CTC------------TTTTTGCTACA---T----------CAATTTCGT------TTTGTTTACGTTTCTCC------AAT--C-CT--------------T--------------CCGCGCA-ACACAGTA-------------------GCT
droWil2 scf2_1100000004510:2211102-2211414 + dwi_438 GAACATTCAGGACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTTACCTAACAAAACAATGAAACCAACAACAAAAAGAAAAAAATAAGAGTTTACTT-ATAAGTTGAGA-----------------------------------------GAATATTTTGGTTCC-ATT----TGT---AATTGGCCCAAAAACAAACAAACAAACAAACA-CTTATTCT------------------AGATCTTA-GTGATTTGC-ATAATTTCC-AAACAAAAAAACGTT-TCCATCTTTAATAT------------CTC-----T-------TTCTGCAT-----AC-----------ATTTCGT------TCTATTTTCTATTCTCT-----------CCGC-----------------------------TTCTCCA-ATACAGTA-------------------GCC
droVir3 scaffold_12875:13476114-13476399 - dvi_6696 GAACATTCAGGACTCCGGCTTCGATGACATGACTGAGAAGGTTTACAAAAGTAAATAACT--CGTTTCGTCATT--------------------------------------------GAGTTAACGT-TTAAGTTGAAAA--TTGA---------A-ACAAACT--GAAAATT---TGTTG---TTTTTGGTTTC-GAG----C------ATTGGCCAAA-------------------AC-TTTAGACAT------------ATG--TAGACCGT-GTAT-TTGA-GTAA-----------------CGTTTTCTTAAA----TCT------------CTCTTTTTTTTC---TCTTTGCCAACACAC------------AATTCAC------TTCGTTTACGCTTCTTT-----------CCTTTTCTTTTTACTTATTTTTG--------AAACGCGCA-ACGCAGTT-------------------CTA
droMoj3 scaffold_6496:6913146-6913486 - dmo_1015 GAACATTCAGGACTCTGGTTTCGATGATATGACTGAGAAGGTTTACAAAAGTAAATAACT--CGTTTCGTCATTGAGTTAA------------------------------------------CACAT-TTAAGTTACAAA--CA-AACACATGGAAA--AAACTACAAAAATTTGATT-GG---TTTTTGGTTTC-GAG----C------ATTGGCCAAA-AACA--------------AT-TTTAGACATTTATCTACATATATATAGAGCGTGT-ATAA-C-----TAATTTCTTAAA-------TCGTTTCACCT--TATATCTCTCTATATATTTCTCT--TTTTTC---TCTTTGCC------AA-----------ATTCGTT------TCTGTT----TTTCTTT-----------C-CA---------CT---TTTTAAAATGCGAAAACGCGCAAACGCAGTTCCACATCTGGATTAAGTAAGCG
droGri2 scaffold_15245:17757285-17757577 + GAACATTCAGGACTCGAGCTTCGATGACATGACTGAGAAGGTTTACAAAAGTAAATAACT--CGTTCCGTCATT--------------------------------------------GAGTTTACAT-TTAAGTTGAAAA--AAGAAAACAA-GAAA--AAAC------AAA----ATATG---TTTTTGGTTTC-GAG----C------ATTGGCCAAA-------------------AA-CTTAGACAT--------------A--TAGACCGT-GTAA-TTGAAATAACATTT-TAA-------ACGTTT--CATCTTATATCT------------CTCT---TTTTC---TCTTTGCCAAC---CAATTTTCTATCCATTTCGT------TCTGTTCAACTTTCTGCTCTTTTATTCCC-TA-----------------------------ACGCGCA-ACGCAGTC-------------------CCA
droAna3 scaffold_13266:17646250-17646529 - dan_2082 GAACATCCAGGACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAACAAAA--------------A---------AAC-CCATTGTG---CTTTTGGTTCG-ATT----CACCAAAATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTTAATAA-TTGA-GTAACTTCT-AAC-------GCGTTTTCCTTCAACCATCT------------CTCTCA-CTCTC---TTTTTGCAACC---GT-----------ATTTGGT------TTTGTTAACGTTTTTCT------ATT--C-CA-----------------------------TCGCGCA-ACCCAGTA-------------------CCC
droBip1 scf7180000396735:914480-914755 - GAACATCCAGGACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTCAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAA--AAA--------------A---------CAC-CCATTGTG---CTTTTGGTTCG-ATT----CCC--ACATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTTAATAA-TTGA-GTAATTTCT-AAC-------GCGTTTTCCTTCAACCATCT------------CTCTCA-CTCTC---TTTTTGCTACC---GT-----------ATTTGGT------TTTGTTAACGTTTCTCT------ATT--C-CA-----------------------------TCGCGCC-ACCCAGTA-------------------CCC
droKik1 scf7180000302682:422992-423300 + GAACATCCAGGACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCTTTTTG--ATCCACCAAA---AAC-----------------------AAACAAAAGAGTTTACTTTTTAAGTTGAAAA--ACAAACA--A-AAA-ACACACA--AAACAC----TTGTG---CTTTTGGTTCC-AAAACATTTA----ATTGGCCCAA-------------------AACCTTAGACCT-----------------TAGACTTA-ATAA-CTGA-GTTACTTCT-AAC-------GCGTTCTCCGTACTC--TCC------------CTC-----TCTC---TTTTTGCTACC---AAATT--------CTTTGGTGGATTCTCTGTTAACGTTTCTCC--ATATATTCCC-GC-----------------------------TTTCG------CTGTA-------------------GCC
droFic1 scf7180000453811:249965-250228 - GAACATCCAGGACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAA-----------------------------CAC----TTGTGCA-CTTTTGGTTCC-AAC----CAT----ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTT-ATAA-TTGA-GTAACTTCT-AAC-------GCGTTCTCCGTTAACCATCT------------CTC-----TTCCTACATTTTGCTATA---AA-----------ATTTCGT------TCTGTTAACGTTTCTCC-----------C-AA-----------------------------TCGCGCA-AACCAGTA-------------------GCC
droEle1 scf7180000491228:254880-255144 - GAACATCCAGGACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAACA--C-------------------------ACAC----TTGTG---CTTTTGGTTTC-AAT----CAC----ATTGGCCCAA-------------------AA-CTTAGACGT--------------T--TAGCCCTT-ACAA-TTGA-GTAA-TTCT-AAC-------GCGTTCTCCGTACCTCATCT------------CTC-----TTCC--ATTTTTGCTACC---AA-----------ATTTCGT------TCTGTTAACGTTTCTCC-----------C-AA----------------------------ATCGCGCC-ATCCAGTA-------------------GCC
droRho1 scf7180000766409:44638-44898 - GAACATCCAGGACTCTGGCTTTGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAA-----------------------------CAC----TTGTG---CTTTTGGTTTC-AAT----CAC----ATTGGCCCAA-------------------AA-CTTAGACA------------------TAGCCTTT-ATAA-TTGA-GTAACTTCT-AAC-------GCGTTCTCCGTAACTCATCT------------CTC-----TTCC--ATTTTTGCTACC---AA-----------ATTTCGT------TCTGTTAACGTTTCTCC-----------C-AA-----------------------------TCGCGCA-ACACAGTA-------------------GCC
droBia1 scf7180000302292:1678151-1678411 - CAACATCCAGGACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--AATAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAA-----------------------------CAC----TTGTG---CTTTTGGTTTC-CAA----CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTT-ATAA-CTGA-GTAACTTCT-AAC-------GCGTTCTCCGTACCCCATCT------------CTCT---CTTCT---ACTTTGCTACC---AA-----------ATTTCGT------TCTGTTAACGTTTCTCC-----------C-AA-----------------------------TCGCGCA-ACCCAGTA-------------------GCC
droTak1 scf7180000415991:143148-143408 + CAACATCCAGGACTCTGACTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--AATAAC------------------------------------CGAAAGAGTTTACTT-TTAAGTTAAAAA-----------------------------CAC----TTGTG---CTTTTGGTTCACAAT----CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTT-ATAA-TTGA-GTAACTTCT-AAC-------GCGTTCTCCGTACCCCATCT------------CTCT---C-TCC---TTTTTGCTACC---AA-----------ATTTCGT------TCTGTTAACGTTTCTCC-----------C-AA-----------------------------TCGCACA-ACCCAGTA-------------------GCC
droEug1 scf7180000409663:638498-638756 - GAACATCCAGGACTCTGGCTTTGATGACATGACTGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAA-----------------------------CAC----TTGTG---CTTTTGGTTTC-AAC----CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTT-ATAA-CTGA-GTAATTTCT-AAC-------GCGTTCTCCGTACTCCATCT------------CTC-----TTCC---CTTTTGCTATG---AA-----------ATTTCGT------TCTGTTAATGTTTCTCC-----------T-AA-----------------------------TCGCGCA-ACAAAGTA-------------------GCC
dm3 chr2R:14708739-14708999 + TAACATCCAGGACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAA-----------------------------CAC----TTGTA---CTTTTGGTTTC-AAT----CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTC-ATAA-TTGA-GTAATTTCT-AAC-------GCGTTTTCCGTACTCCATCT------------CTC-----TTCC---TATTTGCCGCA-CAAA-----------ATTTCGT------TCTGTTAACGTTTCACC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GCC
droSim2 2r:15357062-15357322 + dsi_20946 CAACATCCAGGACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAA-----------------------------CAC----TTGTG---CTTTTGGTTTC-AAT----CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTC-ATAA-TTGA-GTAATTTCT-AAC-------GCGTTTTCCGTACTCCATCT------------CTC-----TTCC---TATTTGCCGCA-CAAA-----------ATTTCGT------TCTGTTAACGTTTCTCC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GCC
droSec2 scaffold_1:12216871-12217131 + dse_731 CAACATCCAGGACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAA-----------------------------CAC----TTGTG---CTTTTGGTTTC-AAT----CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTC-ATAA-TTGA-GTAATTTCT-AAC-------GCGTTTTCCGTACTCCATCT------------CTC-----TTCC---TATATGCCGCA-AAAA-----------ATTTCGT------TCTGTTAACGTTTCTCC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GCC
droYak3 2R:14487203-14487462 - dya_572 CAACATCCAGGACTCTGGCTTCGATGACATGACTGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAA-----------------------------CAC----TTGTG---CTTTTGGTTTC-AAT----CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTT-ATAA-TTGA-GTAATTTCT-AAC-------GCGTTTTCCGTACTCCATCT------------CTC-----TTCC---TATTTGCCACC--AAA-----------ATTTCGT------TCTGTTAACGTTTCTCC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GCC
droEre2 scaffold_4845:8900602-8900863 + der_1080 CAACATCCAGGACTCTGGCTTCGATGACATGACTGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAA-----------------------------CAC----TTGTG---CTTTTGGTTTC-AAT----CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTT-ATAA-TTGA-GTAATTTCT-AAC-------GCGTTTTCCGTACTCCATCT------------CTCT---CTTCC---TATTTGCCAAC--AAA-----------ATTTCGT------TCTGTTAACGTTTCTCC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GAACATTCAGGACTCTGCCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAC------------------------------GGT----TTCTG---ATTTTGGTTCC-AAT----CA------CTGGCCAA--------------------TA-CATAGA--------------------TAGCCTTA-ATAT-TTGA-GTAATTTCT-AAC-------ACGTTCTTCGTAC----TCT------------CTC------------TTTTTGCTACA---T----------CAATTTCGT------TTTGTTTACGTTTCTCC------AAT--C-CT--------------T--------------CCGCGCA-ACACAGTA-------------------GCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................GA--------------------TAGCCTTA-ATAT-TTGA-GTA...........................................................................................................................................................................................................2113.0030000300000
......................................................ATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGA......................................................................................................................................................................................................................................................................................................................................................................................2813.0030030000000
...................................................................................................................................................................................CTG---ATTTTGGTTCC-AAT----CA------CTGGCCA...................................................................................................................................................................................................................................................................................2612.0020110000000
...........................................................................................................................................................................................................................A--------------------TA-CATAGA--------------------TAGCCTTA-ATAT-TTGA-GT............................................................................................................................................................................................................2712.0020110000000
......................GATGACATGACCGAGAAGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000200000
......................................................ATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAG.......................................................................................................................................................................................................................................................................................................................................................................................2712.0020010100000
..........GACTCTGCCTTCGATGACAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................CGATGACATGACCGAGAAGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
..................CTTCGATGACATGACCGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100000
..............................................................................................................................................................................................................................................................................................................................................................................................ATTTCGT------TTTGTTTACGTTTCTCC------AAT--C-C....................................................................2911.0010010000000
.....................................................AATAGCTCTCGTTTTG--ATTAAC------------------------------------A............................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
.........................................................................................................................TTTACTT-TTAAGTTGAAC------------------------------G...................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.....................................................................................................................................................................................................................................................................................................TTCT-AAC-------ACGTTCTTCGTAC----TCT------------..........................................................................................................................................................2311.0010000000100
...................................................................................................................................................................................................................................................................................................ATTTCT-AAC-------ACGTTCTTCG................................................................................................................................................................................1911.0010100000000
........................................................................................................................................................................................................................................................................................AT-TTGA-GTAATTTCT-AAC-------ACGT......................................................................................................................................................................................2211.0010010000000
..............................................................................................................................................................................................GGTTCC-AAT----CA------CTGGCCAA--------------------TA-CATA.......................................................................................................................................................................................................................................................2511.0010100000000
....................................................................................................................................................................................TG---ATTTTGGTTCC-AAT----CA------CTGGCCA...................................................................................................................................................................................................................................................................................2511.0010100000000
........................................................................................................................................................................................................................................................A--------------------TAGCCTTA-ATAT-TTGA-GT............................................................................................................................................................................................................1911.0010010000000
.........................................................................................................................................AAC------------------------------GGT----TTCTG---ATTTTGGTT............................................................................................................................................................................................................................................................................................................2011.0010010000000
.....................CGATGACATGACCGAGAAGGTTTAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
........................................................AGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGA......................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
....................................................AAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAA........................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCTCC------AAT--C-CT--------------T--------------CCGCGC................................2111.0010000100000
.......................................................................................................................................................................................................................................................................................................CT-AAC-------ACGTTCTTCGTAC----TCT------------CTC------------TTTTT......................................................................................................................................2911.0010010000000
..........................................TTACAAAAGTAAATAGCTCTCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
........................................................................................................................................................................................................................................................................................................................TCTTCGTAC----TCT------------CTC------------TTTTTGC....................................................................................................................................2211.0010001000000
................................................................................................................................................................................................................................................................................................................................................................................................................TTACGTTTCTCC------AAT--C-CT--------------T--------------CCGCGC................................2511.0010010000000
.............TCTGCCTTCGATGACATGACCGAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTTACGTTTCTCC------AAT--C-CT--------------T--------------CCGC..................................2411.0010100000000
..........GACTCTGCCTTCGATGACATGACCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCC------AAT--C-CT--------------T--------------CCGCGCA-ACACA.........................2511.0010100000000
...........................................................................................................................................................................................................................A--------------------TA-CATAGA--------------------TAGCCTTA-ATAT-TTGA-GC............................................................................................................................................................................................................2711.0010010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TACGTTTCTCC------AAT--C-CT--------------T--------------CCGCGC................................2411.0010010000000
..........................................................................................................................................................................GGT----TTCTG---ATTTTGGTTCC-AAT----CA------CT........................................................................................................................................................................................................................................................................................2611.0010010000000
..........................................................................................................................TTACTT-TTAAGTTGAAC------------------------------GGT----TTCC.........................................................................................................................................................................................................................................................................................................................2411.0010010000000
.....................................................AATAGCTCTCGTTTTG--ATTAAC------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.........................................................................................................................................................................................................................CAA--------------------TA-CATAGA--------------------TAGCCTTA-........................................................................................................................................................................................................................1911.0010100000000
.....TTCAGGACTCTGCCTTCGATGACATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................TGCTACA---T----------CAATTTCGT------TTTGTT.............................................................................................2311.0010100000000
..............CTGCCTTCGATGACATGACCGAGAAGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
..................................................................................................................................................................................................................................................................................................AATTTCT-AAC-------ACGTTCTTCGTAC----TCT------------C.........................................................................................................................................................2711.0010010000000
..ACATTCAGGACTCTGCCTTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
..................................................GTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAA..........................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
.......CAGGACTCTGCCTTCGATGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
.........................................................GCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGA......................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................ACGTTTCTCC------AAT--C-CT--------------T--------------CCG...................................2011.0010000100000
droPer2
GAACATTCAGGACTCTGCCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAC------------------------------GGT----TTCTG---ATTTTGGTTCC-AAT----CA------CTGGCCAA--------------------TA-CATAGA--------------------TAGCCTTA-ATAT-TTGA-GTAATTTCA-AAC-------ACGTTCTTCGTAC----TCT------------CTC------------TTTTTGCTACA---T----------CAATTTCGT------TTTGTTTACGTTTCTCC------AAT--C-CT--------------T--------------CCGCGCA-ACACAGTA-------------------GCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
GAACATTCAGGACTCTGCCTTCGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25110.00101000000
..........................................................................................................................TTACTT-TTAAGTTGAAC------------------------------GGT----TTCTG---AT...................................................................................................................................................................................................................................................................................................................2713.003300000
....................................................................................................................................................................................................................................................................................................................................................................TTTTGCTACA---T----------CAATTTCGT------TTTGT..............................................................................................2513.003300000
...CATTCAGGACTCTGCCTTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003300000
..........GACTCTGCCTTCGATGACATGACCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.003300000
.......................................................................................................................................................................................................................................................................................................................................................................TGCTACA---T----------CAATTTCGT------TTTGT..............................................................................................2213.003300000
.........................................................................................................................................................................................................................................................................................................................CTTCGTAC----TCT------------CTC------------TTTTTGCT...................................................................................................................................2213.003300000
..ACATTCAGGACTCTGCCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
....ATTCAGGACTCTGCCTTCGATGACATGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.002200000
..........................................................................................................................................AC------------------------------GGT----TTCTG---ATTTTGGTTCC-.........................................................................................................................................................................................................................................................................................................2112.002200000
.................................................................................................................................................................................TTCTG---ATTTTGGTTCC-AAT----CA------CTGGCCAA--------------------..............................................................................................................................................................................................................................................................2912.002200000
..................................................................................................................................................................................................................................................................................................AATTTCA-AAC-------ACGTTCTTCGTAC----TCT------------..........................................................................................................................................................2612.002200000
GAACATTCAGGACTCTGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
..................................................................................................................................TAAGTTGAAC------------------------------GGT----TTCTG---ATTTTGGTTCC-.........................................................................................................................................................................................................................................................................................................2912.002200000
...........................................................................................................................................................................................................................A--------------------TA-CATAGA--------------------TAGCCTTA-ATAT-TTGA-GT............................................................................................................................................................................................................2712.002002000
..ACATTCAGGACTCTGCCTTCGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002200000
.....................................................................................................................................................................................................................................................................................................................................................................TTTGCTACA---T----------CAATTTCGT------...................................................................................................1912.002200000
...........................................................................................................................................................................................................................................................................................................AC-------ACGTTCTTCGTAC----TCT------------CTC------------T..........................................................................................................................................2212.002200000
....................................................................................................................................................................................................................................................................................................................................................................TTTTGCTACA---T----------CAATTTCGT------...................................................................................................2012.002200000
..................................................................................................................................................................................TCTG---ATTTTGGTTCC-AAT----CA------C.........................................................................................................................................................................................................................................................................................2112.002200000
..ACATTCAGGACTCTGCCTTCGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
.............................................................................................................................................................................................................................................................................................GA-GTAATTTCA-AAC-------ACGTTCTTCG................................................................................................................................................................................2411.001001000
...........................................................................................................................................C------------------------------GGT----TTCTG---ATTTTGGTTCC-AAT----C.................................................................................................................................................................................................................................................................................................2411.001010000
.....................................................................................................................................................................................................AAT----CA------CTGGCCAA--------------------TA-CATAGA--------------------.................................................................................................................................................................................................................................2111.001001000
...CATTCAGGACTCTGCCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
........................................................................................................................................................................................................................................................................................................................TCTTCGTAC----TCT------------CTC------------TTTT.......................................................................................................................................1911.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TCTCC------AAT--C-CT--------------T--------------CCGCGCA-..............................1911.001001000
.........................................................................................................................................................................................................................................................................................................................CTTCGTAC----TCT------------CTC------------TTTTTGCC...................................................................................................................................2211.001100000
.......................................................................................................................................................................................................................................................................................................................................................................TGCTACA---T----------CAATTTCGT------TTTGC..............................................................................................2211.001100000
.........................................................................................................................................AAC------------------------------GGT----TTCTG---ATTTTGGTTCC-.........................................................................................................................................................................................................................................................................................................2211.001100000
.....................................................................................................................................................................................................................................................................................................................................TCT------------CTC------------TTTTTGCTACA---T----------CA................................................................................................................2011.001010000
......................................................ATAGCTCTCGTTTTG--ATTAAC------------------------------------A............................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
..........................................................................................................................................................................................................................................................................................................AAC-------ACGTTCTTCGTAC----TCT------------CTC------------TT.........................................................................................................................................2411.001100000
.....................................................................................................................................GTTGAAC------------------------------GGT----TTCTG---ATTTTGGT.............................................................................................................................................................................................................................................................................................................2311.001001000
.AACATTCAGGACTCTGCCTTCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.................................CGAGAAGGTTTACAAAAGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
.AACATTCAGGACTCTGCCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
............CTCTGCCTTCGATGACATGACCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.......................................................................................................................................................................................................................................................................................................................................................................TGCTACA---T----------CAATTTCGT------TTTGTT.............................................................................................2311.001001000
....................................................................................................................................................................................TG---ATTTTGGTTCC-AAT----CA------CTGGCCA...................................................................................................................................................................................................................................................................................2511.001010000
...........................................................................................................................................................................GT----TTCTG---ATTTTGGTTCC-.........................................................................................................................................................................................................................................................................................................1811.001100000
.....................................................AATAGCTCTCGTTTTG--ATTAAC------------------------------------AAA..........................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.AACATTCAGGACTCTGCCTTCGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.....................................................................................................................................................................................................................................................TAGA--------------------TAGCCTTA-ATAT-TTGA-GT............................................................................................................................................................................................................2211.001001000
............................................................................................................................................................................................................................................................................................................................................................................................CAATTTCGT------TTTGTTTACGT........................................................................................2011.001100000
......................GATGACATGACCGAGAAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
......................................................ATAGCTCTCGTTTTG--ATT....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...............................................................................................................................T-TTAAGTTGAAC------------------------------GGT----TTCTG---ATTTT................................................................................................................................................................................................................................................................................................................2511.001010000
.....................................................................................................................................................................................................................................................................................................................................................................TTTGCTACA---T----------CAATTTCGT------TTTGT..............................................................................................2411.001100000
....................................................................................................................................................................................................................................................ATAGA--------------------TAGCCTTA-ATAT-TTGA-GTA...........................................................................................................................................................................................................2411.001001000
......................GATGACATGACCGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
.AACATTCAGGACTCTGCCTTCGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.........GGACTCTGCCTTCGATGACATGACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..........................................................................................................................................................................................................................................................................................................................................................................TACA---T----------CAATTTCGT------TTTGT..............................................................................................1911.001100000
................................................................................................................................................................................................................................................................................................GTAATTTCA-AAC-------ACGTTCTTCG................................................................................................................................................................................2211.001100000
......................................................................................................................GAGTTTACTT-TTAAGTTGAAC------------------------------....................................................................................................................................................................................................................................................................................................................................2111.001100000
......TCAGGACTCTGCCTTCGATGACATGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.....................CGATGACATGACCGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
droWil2
GAACATTCAGGACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTTACCTAACAAAACAATGAAACCAACAACAAAAAGAAAAAAATAAGAGTTTACTT-ATAAGTTGAGA-----------------------------------------GAATATTTTGGTTCC-ATT----TGT---AATTGGCCCAAAAACAAACAAACAAACAAACA-CTTATTCT------------------AGATCTTA-GTGATTTGC-ATAATTTCC-AAACAAAAAAACGTT-TCCATCTTTAATAT------------CTC-----T-------TTCTGCAT-----AC-----------ATTTCGT------TCTATTTTCTATTCTCT-----------CCGC-----------------------------TTCTCCA-ATACAGTA-------------------GCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................AGAGTTTACTT-ATAAGTTGAGA-----------------------------------------GA.......................................................................................................................................................................................................................................................................................................................2414.00400040
........................................................................................................................GTTTACTT-ATAAGTTGAGA-----------------------------------------.........................................................................................................................................................................................................................................................................................................................1913.00300030
......................GATGACATGACCGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2022.50500050
....................................................................................................................AAGAGTTTACTT-ATAAGTTGAGA-----------------------------------------GA.......................................................................................................................................................................................................................................................................................................................2512.00200020
......................................................................................................AAAAAGAAAAAAATAAGAGT....................................................................................................................................................................................................................................................................................................................................................................................2012.00200020
.......................................................................................................................AGTTTACTT-ATAAGTTGAGA-----------------------------------------GA.......................................................................................................................................................................................................................................................................................................................2212.00200020
..........................................................................................................................TTACTT-ATAAGTTGAGA-----------------------------------------G........................................................................................................................................................................................................................................................................................................................1812.00200020
.....................................................AATAGCTCTCGTTTTG--AT.....................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200020
..........................................................................................................................TTACTT-ATAAGTTGAGA-----------------------------------------GA.......................................................................................................................................................................................................................................................................................................................1912.00201010
..........................................................................................................................TTACTT-ATAAGTTGAGA-----------------------------------------GAATATTTT................................................................................................................................................................................................................................................................................................................2612.00200020
....................................................................................................................................AGTTGAGA-----------------------------------------GAATATTTTGGT.............................................................................................................................................................................................................................................................................................................2012.00200020
.......................ATGACATGACCGAGAAGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.50300030
.......................................................................................................................................................................................ATATTTTGGTTCC-ATT----TGT---............................................................................................................................................................................................................................................................................................1911.00100010
...................................................................TG--ATTTACCTAACAAAACAATGAAACC..............................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
......................................................................................................................................................................................................................................................ATTCT------------------AGATCTTA-GTGAT...................................................................................................................................................................................................................1811.00110000
.........................................................................................................................TTTACTT-ATAAGTTGAGA-----------------------------------------GA.......................................................................................................................................................................................................................................................................................................................2011.00100010
.................................................................................................................................ATAAGTTGAGA-----------------------------------------GAATATTTTGGTTC...........................................................................................................................................................................................................................................................................................................2511.00100010
................................................................................................................................................................................................................................................CA-CTTATTCT------------------AGATCTTA-GT......................................................................................................................................................................................................................2011.00100010
.AACATTCAGGACTCTGGCTTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
.....................................................................................................................................................................................................ATT----TGT---AATTGGCCCAAA................................................................................................................................................................................................................................................................................1811.00100010
..............................................................................................................................................................................................................................................................................GATCTTA-GTGATTTGC-ATA...........................................................................................................................................................................................................1911.00100010
.....................................................................................................................................................................................................ATT----TGT---AATTGGCCCAAAAAC.............................................................................................................................................................................................................................................................................2111.00100010
.................................................................................................................................ATAAGTTGAGA-----------------------------------------GAATATTTTGGTTCC-.........................................................................................................................................................................................................................................................................................................2611.00100010
GAACATTCAGGACTCTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
......................................................ATAGCTCTCGTTTTG--ATTTACCT...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
..........................................TTACAAAAGTAAATAGCTCTCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.................................................................................................................................ATAAGTTGAGA-----------------------------------------GAATATTTT................................................................................................................................................................................................................................................................................................................2011.00100010
......................................................................................................................................TTGAGA-----------------------------------------GAATATTTTGGT.............................................................................................................................................................................................................................................................................................................1811.00100010
....................................................................................................................................................................................................................................................................................................................................................................TTCTGCAT-----AC-----------ATTTCGT------TCT................................................................................................2021.00200020
....ATTCAGGACTCTGGCTTCGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.............................................................................................................................CTT-ATAAGTTGAGA-----------------------------------------GAATATTTT................................................................................................................................................................................................................................................................................................................2311.00100010
......................................................................................................................GAGTTTACTT-ATAAGTTGAGA-----------------------------------------GAAT.....................................................................................................................................................................................................................................................................................................................2511.00100010
.......................................................................................................................................................................................ATATTTTGGTTCC-ATT----TGT---AATT........................................................................................................................................................................................................................................................................................2311.00100010
.......CAGGACTCTGGCTTCGATGACAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
....ATTCAGGACTCTGGCTTCGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
........................................................................................................................GTTTACTT-ATAAGTTGAGA-----------------------------------------GA.......................................................................................................................................................................................................................................................................................................................2111.00100010
.................................................................................................................................ATAAGTTGAGA-----------------------------------------GAATATTT.................................................................................................................................................................................................................................................................................................................1911.00100010
...............................................................................................................................T-ATAAGTTGAGA-----------------------------------------GAATATTTTGGTTCC-.........................................................................................................................................................................................................................................................................................................2711.00100010
....................................................................................................ACAAAAAGAAAAAAATAAGAGT....................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.................................................AGTAAATAGCTCTCGTTTTG--.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
..........................................TTACAAAAGTAAATAGCTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.........GGACTCTGGCTTCGATGACATGACCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
................................................................................................AACAACAAAAAGAAAAAAATAAGAGT....................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.....................................................................................................................AGAGTTTACTT-ATAAGTTGA....................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.......................................................................................................................................TGAGA-----------------------------------------GAATATTTTGGTTCC-.........................................................................................................................................................................................................................................................................................................2011.00100010
......................................................................................................................................................................................................................................................ATTCT------------------AGATCTTA-GTGATTTGC-..............................................................................................................................................................................................................2211.00100010
...........................................TACAAAAGTAAATAGCTCTCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.......................................................................................................................................................................................................................................................TTCT------------------AGATCTTA-GTGATTTGC-..............................................................................................................................................................................................................2111.00100010
.AACATTCAGGACTCTGGCTTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...................................................................................................................................AAGTTGAGA-----------------------------------------GAATATTTTGGTTC...........................................................................................................................................................................................................................................................................................................2311.00100010
............CTCTGGCTTCGATGACATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
..........................................................................................................................................................................................TTTTGGTTCC-ATT----TGT---AATT........................................................................................................................................................................................................................................................................................2011.00100010
.................................................................................................................................................................................................................................................................................CTTA-GTGATTTGC-ATAATTTCC-....................................................................................................................................................................................................2211.00100010
...................TTCGATGACATGACCGAGAAGGTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.00201010
..............................................................................................................................TT-ATAAGTTGAGA-----------------------------------------GAATA....................................................................................................................................................................................................................................................................................................................1811.00100010
...............................................AAAGTAAATAGCTCTCGTTTTG--ATT....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
GAACATTCAGGACTCTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..........................................................................................................................................................................................................................................................................................................................TCCATCTTTAATAT------------CTC-----T-------TTCTGCA...................................................................................................................................2511.00101000
......................................................................................................................................................................................................................................................ATTCT------------------AGATCTTA-GTGATTT.................................................................................................................................................................................................................2011.00100010
................................................AAGTAAATAGCTCTCGTTTTG--.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.......................ATGACATGACCGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.00200020
.....................................................................................................................................................................................................................................................TATTCT------------------AGATCTTA-GTGATTTGC-A.............................................................................................................................................................................................................2411.00110000
.......................................................................................................................................................................................................T----TGT---AATTGGCCCAAAAACA............................................................................................................................................................................................................................................................................2011.00100010
....................................................................................................................AAGAGTTTACTT-ATAAGTT......................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.................................................................................................................................ATAAGTTGAGA-----------------------------------------GAATATTTTG...............................................................................................................................................................................................................................................................................................................2111.00100010
.......................................................TAGCTCTCGTTTTG--ATTTAC.................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.............................................................................................................................................................................................................................................AAACA-CTTATTCT------------------AGATCTTA-GT......................................................................................................................................................................................................................2311.00100010
.......................................................................................................................................................................................................T----TGT---AATTGGCCCAAAAACAAACAAACAA...................................................................................................................................................................................................................................................................2911.00101000
..............CTGGCTTCGATGACATGACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
..............................................................................................................................................................................................................................................AACA-CTTATTCT------------------AGATCTTA-GT......................................................................................................................................................................................................................2211.00100010
....ATTCAGGACTCTGGCTTCGATGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
........................................................................................................................................GAGA-----------------------------------------GAATATTTTGGTTC...........................................................................................................................................................................................................................................................................................................1811.00100010
.................................................................................................................................ATAAGTTGAGA-----------------------------------------GAATATTTTGGTTCC-A........................................................................................................................................................................................................................................................................................................2711.00100010
..........................................................................................................................................................................................................................................AACAAACA-CTTATTCT------------------AGATCT...........................................................................................................................................................................................................................2220.50100010
..............................................................................................................................................................................................................................................................................................................................TCTTTAATAT------------CTC-----T-------TTCTGCAT-----AC-----------ATT.............................................................................................................2720.50101000
.....................................................................................................................................................................................................................................................................................................................................TAT------------CTC-----T-------TTCTGCAT-----AC-----------ATTTCGT------TC.................................................................................................2620.50101000
....................................................................................................................................................................................................................................................................................................................................................................TTCTGCAT-----AC-----------ATTTCGT------TCTATTTTCTA........................................................................................2820.50100010
...................TTCGATGACATGACCGAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50100010
.....................................................................................................................................................................................................................................................................................................................................................................TCTGCAT-----AC-----------ATTTCGT------TCTA...............................................................................................2020.50100010
......................GATGACATGACCGAGAAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50100100
.......................................................................................................................................................................................................................................................................................................................................T------------CTC-----T-------TTCTGCAT-----AC-----------ATTTCGT------TCTATT.............................................................................................2820.50101000
....................TCGATGACATGACCGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50100010
...........................................................................................................................................................................................................................................................................................................................................................................T-----AC-----------ATTTCGT------TCTATTTTCTATTCTCT-----------C......................................................................2820.50101000
.................GCTTCGATGACATGACCGAGAAGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100010
.................................CGAGAAGGTTTACAAAAGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100010
.....................CGATGACATGACCGAGAAGGTTTAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100010
.........................GACATGACCGAGAAGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50100010
......................GATGACATGACCGAGAAGGTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50100010
..............................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCTATTCTCT-----------CCGC-----------------------------TT....................................2020.50100010
..................................................................................................................................................................................................................................................................................................................................TAATAT------------CTC-----T-------TTCTGCAT-----AC-----------ATTTCGT------TC.................................................................................................2920.50101000
..................................................................................................................................................................................................................................................................................................................................TAATAT------------CTC-----T-------TTCTGCAT-----AC-----------ATTTCGT------...................................................................................................2720.50101000
.....................CGATGACATGACCGAGAAGGTTTACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100010
.....................CGATGACATGACCGAGAAGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50100010
.........................GACATGACCGAGAAGGTTTACAAAAGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50101000
.............................................................................................................................................................................................................................................................................................................................................................................................................TATTTTCTATTCTCT-----------CCGC-----------------------------TTCTCCA-A.............................2720.50101000
........................................................................................................................................................................................................................................CAAACAAACA-CTTATTCT------------------AGATCTTA-........................................................................................................................................................................................................................2620.50100010
...............................................................................................................................................................................................................................................................................................................................CTTTAATAT------------CTC-----T-------TTCTGC....................................................................................................................................1920.50100010
......................GATGACATGACCGAGAAGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100010
.....................................................................................................................................................................................................................................................................................................................................TAT------------CTC-----T-------TTCTGCAT-----AC-----------ATTTCGT------TCTAT..............................................................................................2920.50101000
......................................................................................................................................................................................................................................................................................................................................................C-----T-------TTCTGCAT-----AC-----------ATTTCGT------T..................................................................................................2020.50101000
.........................................................................................................................................................................................................................................AAACAAACA-CTTATTCT------------------AGAT.............................................................................................................................................................................................................................2120.50100010
.................GCTTCGATGACATGACCGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100010
droVir3
GAACATTCAGGACTCCGGCTTCGATGACATGACTGAGAAGGTTTACAAAAGTAAATAACT--CGTTTCGTCATT--------------------------------------------GAGTTAACGT-TTAAGTTGAAAA--TTGA---------A-ACAAACT--GAAAATT---TGTTG---TTTTTGGTTTC-GAG----C------ATTGGCCAAA-------------------AC-TTTAGACAT------------ATG--TAGACCGT-GTAT-TTGA-GTAA-----------------CGTTTTCTTAAA----TCT------------CTCTTTTTTTTC---TCTTTGCCAACACAC------------AATTCAC------TTCGTTTACGCTTCTTT-----------CCTTTTCTTTTTACTTATTTTTG--------AAACGCGCA-ACGCAGTT-------------------CTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................TCAC------TTCGTTTACGCTTCTTT-----------CCTTT..................................................................2615.005000010000000000000000000100100000000000000000000000000000000002
......................................................ATAACT--CGTTTCGTCATT--------------------------------------------GAGT....................................................................................................................................................................................................................................................................................................................................................................................2214.004001300000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TCAC------TTCGTTTACGCTTCTTT-----------CCTTTTC................................................................2814.004000000000000000000000000000000000000000000000000000000000000004
.............................................................................................................................................................................T---TGTTG---TTTTTGGTTTC-GAG----..................................................................................................................................................................................................................................................................................................2014.004000000000000000000000000000000000000000000000000000000000000004
............................................................................................................................................................................TT---TGTTG---TTTTTGGTTTC-GAG----..................................................................................................................................................................................................................................................................................................2114.004000000000000000000000000000000000000000000000000000000000000004
....................................................................................................................................................................................................................................................TTAGACAT------------ATG--TAGACCGT-GT......................................................................................................................................................................................................................2113.003000000102000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TGAAAA--TTGA---------A-ACAAACT--GAAAATT---.............................................................................................................................................................................................................................................................................................................................2513.003000300000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TACGCTTCTTT-----------CCTTTTCTTTTTAC.........................................................2513.003000000000000000000000000000000000000000000000000000000000000003
..........................................................................................................................................................................................................................................................................................................................TCTTAAA----TCT------------CTCTTTTTTTTC---TCTTC......................................................................................................................................2713.003000000000000000000000000000000000000000000000000000000000000003
...........................................................................................................................................................................................................................................................................................................................................................................................................................T-----------CCTTTTCTTTTTAC.........................................................1532.678000000000000000000000000000000000000000000000000000000000000008
........................................................................................................................GTTAACGT-TTAAGTTGAAAA--TTGA---------A-AC..............................................................................................................................................................................................................................................................................................................................................2712.002000200000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................AATT---TGTTG---TTTTTGGTTTC-GAG----C------...........................................................................................................................................................................................................................................................................................2412.002000200000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................GT-GTAT-TTGA-GTAA-----------------CGTTTTCT.................................................................................................................................................................................2212.002000000000000000000000000000002000000000000000000000000000000000
.................................................................................................................................................................................................TTC-GAG----C------ATTGGCCAAA-------------------AC-TTTAGAC....................................................................................................................................................................................................................................................2612.002002000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AATTCAC------TTCGTTTACGCTTCT....................................................................................2212.002000000000020000000000000000000000000000000000000000000000000000
........................................................................TT--------------------------------------------GAGTTAACGT-TTAAGTTGAAA..................................................................................................................................................................................................................................................................................................................................................................2312.002000000001000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................TCTTTGCCAACACAC------------AATTCAC------TTCGTT.............................................................................................2812.002000000000000000000000000001000000000000000000000000000000000001
................................................................................................................................................................................................................................................AC-TTTAGACAT------------ATG--TAGACCGT-GT......................................................................................................................................................................................................................2412.002000000000000000001000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................TTCAC------TTCGTTTACGCTTCTTT-----------CCTTT..................................................................2712.002000000000000000000000000002000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TTTAGACAT------------ATG--TAGACCGT-G.......................................................................................................................................................................................................................2111.001000000001000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................CTTTGCCAACACAC------------AATTCAC------TTCG...............................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................AA-------------------AC-TTTAGACAT------------ATG--TAGACCGT-GTAT-T..................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GACCGT-GTAT-TTGA-GTAA-----------------CGTT.....................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................GACAT------------ATG--TAGACCGT-GT......................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
........................TGACATGACTGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................TGCCAACACAC------------AATTCAC------TTCGTTC............................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..............................................................CGTTTCGTCATT--------------------------------------------GAGTTA..................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000001000000000000000000000000000000000000000
...........................................................................................................................................................................ATT---TGTTG---TTTTTGGTTTC-GAG----C------...........................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.........................GACATGACTGAGAAGGTTTACAAAAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
....................TCGATGACATGACTGAGAAGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................TTGA---------A-ACAAACT--GAAAATT---TGT..........................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CT------------CTCTTTTTTTTC---TCTTTGCCAAC................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000001
..................................................................................................................................................................................GTTG---TTTTTGGTTTC-GAG----C------...........................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
.....TTCAGGACTCCGGCTTCGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................TTTTGGTTTC-GAG----C------ATTGG......................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................GTTTC-GAG----C------ATTGGCCAAA-------------------..............................................................................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TG--TAGACCGT-GTAT-TTGA-GTAA-----------------CGTT.....................................................................................................................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................TGTTG---TTTTTGGTTTC-GAG----C------...........................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................AT-TTGA-GTAA-----------------CGTTTTCTTAAA----TCT------------CTCT......................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GTTTACGCTTCTTT-----------CCTTTT.................................................................2011.001000000000000000000000000000000000000000000000000000000000000001
..........................................................................................................................................................................................................................................................................................................................................................................CAACACAC------------AATTCAC------TTCGTT.............................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................AT------------ATG--TAGACCGT-GTAT-TTGA-..............................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
......................................................ATAACT--CGTTTCGTCATT--------------------------------------------GAG.....................................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TG---TTTTTGGTTTC-GAG----C------ATTGGCCAA..................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TCTTTGCCAACACAC------------AATTCAC------TTCGTC.............................................................................................2811.001000000000000000000000000000100000000000000000000000000000000000
.....................CGATGACATGACTGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000010000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTATTTTTG--------AAACGCGCA-ACGCAGT.......................2811.001001000000000000000000000000000000000000000000000000000000000000
...................................AGAAGGTTTACAAAAGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................TTTC-GAG----C------ATTGGCCAAA-------------------AC-T..........................................................................................................................................................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................................................TTGGTTTC-GAG----C------ATTGGCCAAA-------------------AC-TT.........................................................................................................................................................................................................................................................2611.001000000100000000000000000000000000000000000000000000000000000000
....................................................AAATAACT--CGTTTCGTCATT--------------------------------------------GAGT....................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TTC---TCTTTGCCAACACAC------------AATTCAC------T..................................................................................................2611.001000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TTGCCAACACAC------------AATTCAC------TTCGTTT............................................................................................2611.001000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................C------------AATTCAC------TTCGTTTACGCTTCTT...................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TTACGCTTCTTT-----------CCTTTTCTTTTTACT........................................................2711.001000000000000000000000000010000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................G--TAGACCGT-GTAT-TTGA-GTA...........................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TG---TTTTTGGTTTC-GAG----C------ATTGGC.....................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
.....TTCAGGACTCCGGCTTCGATGACATGACTGAGAAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................3611.001000000000000000000000000000000000000000001000000000000000000000
.....TTCAGGACTCCGGCTTCGATGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
....................TCGATGACATGACTGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000010000000000000000000000000000000000000000000000000
GAACATTCAGGACTCCGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
....................................................................................................................................AGTTGAAAA--TTGA---------A-ACAAACT--GAAAATT---.............................................................................................................................................................................................................................................................................................................................2811.001000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................C------TTCGTTTACGCTTCTTT-----------C......................................................................1911.001000000000000000000000000000000000001000000000000000000000000000
....ATTCAGGACTCCGGCTTCGATGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000001
.................................................................................................................................................................................................TTC-GAG----C------ATTGGCCAAA-------------------AC-C..........................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TAGACCGT-GTAT-TTGA-GTAA-----------------CGTT.....................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................TTTGCCAACACAC------------AATTCAC------TTCGTTT............................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................TG---TTTTTGGTTTC-GAG----C------ATTGGCC....................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
..........................................................CT--CGTTTCGTCATT--------------------------------------------GAGTTAA.................................................................................................................................................................................................................................................................................................................................................................................2111.001000000100000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG--------AAACGCGCA-ACGCAGTT-------------------C..2111.001000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................AA-------------------AC-TTTAGACAT------------ATG--TAGACCGT-........................................................................................................................................................................................................................2411.001000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AATTCAC------TTCGTTTACGCTTC.....................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................................................C---TCTTTGCCAACACAC------------AATTCAC------TTCGT..............................................................................................2811.001000000000000000000000000000000000010000000000000000000000000000
.......................ATGACATGACTGAGAAGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TTTTTTTC---TCTTTGCCAAC................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000001
.......................ATGACATGACTGAGAAGGTTTACAAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000001000000000000000000000000000
.....................................................................................................................................................................................G---TTTTTGGTTTC-GAG----C------ATTG.......................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................GAGTTAACGT-TTAAGTTGAAAA--TTGA---------A-AC..............................................................................................................................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
....................TCGATGACATGACTGAGAAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................A----TCT------------CTCTTTTTTTTC---TCTTTGCCAAC................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................AA-------------------AC-TTTAGACAT------------ATG--TAGACCGT-GT......................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
............CTCCGGCTTCGATGACAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................TCAC------TTCGTTTACGCTTCTT...................................................................................2011.001000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................TTGGCCAAA-------------------AC-TTTAGACAT------------ATG--T................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TTGGTTTC-GAG----C------ATTGGCC....................................................................................................................................................................................................................................................................................1911.001000000010000000000000000000000000000000000000000000000000000000
................GGCTTCGATGACATGACTGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................TTTGGTTTC-GAG----C------ATTGGC.....................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
GAACATTCAGGACTCCGGCTTCGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................T--------------------------------------------GAGTTAACGT-TTAAGTT......................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................AACACAC------------AATTCAC------TTCGT..............................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTG--------AAACGCGCA-ACGCAGTT-------------------...2411.001000000000000000000000010000000000000000000000000000000000000000
..........................ACATGACTGAGAAGGTTTAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000001000000000000000000000000000000
........................................................AACT--CGTTTCGTCATT--------------------------------------------GAGT....................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................ATT---TGTTG---TTTTTGGTTTC-GAG----C------ATTGGC.....................................................................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
.......CAGGACTCCGGCTTCGATGACATGACTGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................3511.001000000000000000000000000000000000000000000000000000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTATTTTTG--------AAACGCGC................................1911.001000100000000000000000000000000000000000000000000000000000000000
.....TTCAGGACTCCGGCTTCGATGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................TG---TTTTTGGTTTC-GAG----C------ATTG.......................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................G----C------ATTGGCCAAA-------------------AC-TTTAGAC....................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TTACGCTTCTTT-----------CCTTTTCTTTTTAAA........................................................2711.001000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CAC------TTCGTTTACGCTTCTTT-----------CCTTT..................................................................2511.001000000100000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................G---TTTTTGGTTTC-GAG----C------ATTGGCCAAA-------------------..............................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................T-----------CCTTTTCTTTTTACC........................................................16200.65130000000000000000000000000000000000000000000000000000000000000013
................................................................................................................................................................AAACT--GAAAATT---TGTTG---TTTTTT...............................................................................................................................................................................................................................................................................................................2320.501000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTTACGCTTCTTT-----------CCTTTTTAC..............................................................2620.501000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................AATT---TGTTG---TTTTTGGTT............................................................................................................................................................................................................................................................................................................1830.331000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTACTTATTTTTG--------AC......................................1880.131000000000000000000000000010000000000000000000000000000000000000
droMoj3
GAACATTCAGGACTCTGGTTTCGATGATATGACTGAGAAGGTTTACAAAAGTAAATAACT--CGTTTCGTCATTGAGTTAA------------------------------------------CACAT-TTAAGTTACAAA--CA-AACACATGGAAA--AAACTACAAAAATTTGATT-GG---TTTTTGGTTTC-GAG----C------ATTGGCCAAA-AACA--------------AT-TTTAGACATTTATCTACATATATATAGAGCGTGT-ATAA-C-----TAATTTCTTAAA-------TCGTTTCACCT--TATATCTCTCTATATATTTCTCT--TTTTTC---TCTTTGCC------AA-----------ATTCGTT------TCTGTT----TTTCTTT-----------C-CA---------CT---TTTTAAAATGCGAAAACGCGCAAACGCAGTTCCACATCTGGATTAAGTAAGCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................GTTTC-GAG----C------ATTGGCCAAA-A...............................................................................................................................................................................................................................................................................2013.003100002
......................................................ATAACT--CGTTTCGTCATTG...................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
....ATTCAGGACTCTGGTTTCGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
................................................................................................................................................................................................................................................................CTACATATATATAGAGCGTG..........................................................................................................................................................................................................................2011.001000010
.............................................CAAAAGTAAATAACT--CGTTTCGTCATTG...................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.......................................................................................................................................................................................................................................................................TATATAGAGCGTGT-ATAA-C-----TAAT.........................................................................................................................................................................................................2311.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAACGCGCAAACGCAGTTCCAC..................2411.001100000
................................................................................................................................................................................................................................................................CTACATATATATAGAGCGTGT-ATAA-...................................................................................................................................................................................................................2511.001000001
......................................................................................................................................................................................................................................................................................................................................................................TTGCC------AA-----------ATTCGTT------TCTGTT----TTTCT....................................................................................2511.001100000
..........................................................................................................................................................................................................................................................................................................................................................TTTTTC---TCTTTGCC------AA-----------ATTCGTT------...................................................................................................2311.001100000
..........................ATATGACTGAGAAGGTTTACAAAAGTAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.........................................................................................................................................................................................................................................................................................................................................................................CC------AA-----------ATTCGTT------TCTGTT----TTTCT....................................................................................2211.001100000
............................................................................................................................................................................................................................................................................................................................................................TTTC---TCTTTGCC------AA-----------ATTCGTT------TCTGTT----.........................................................................................2711.001100000
..............................................................................................................................................................................................GGTTTC-GAG----C------ATTGGCCAAA-................................................................................................................................................................................................................................................................................2011.001000010
................................................................................................................................................................................................................................................................CTACATATATATAGAGCGTGT-........................................................................................................................................................................................................................2111.001000001
.................................................................................................................................................................................TT-GG---TTTTTGGTTTC-GAG----C------...........................................................................................................................................................................................................................................................................................1911.001000001
...CATTCAGGACTCTGGTTTCGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.......................................................................................................................................................................................................................................................................................TAA-C-----TAATTTCTTAAA-------TCGTT.....................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................AATTTGATT-GG---TTTTTGGTTTC-GAG----C------...........................................................................................................................................................................................................................................................................................2611.001100000
.....................................................................................................................................................................................................................................................................................................................CGTTTCACCT--TATATCTCTCT..................................................................................................................................................................2111.001100000
..............................................................................................................................AT-TTAAGTTACAAA--CA-AACACATGGAAA--..............................................................................................................................................................................................................................................................................................................................................2811.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCGCAAACGCAGTTCCACATCTGGAT..........2811.001100000
.........................................................................................................................................CAAA--CA-AACACATGGAAA--AAACTACAAAA...................................................................................................................................................................................................................................................................................................................................2911.001100000
......................................................ATAACT--CGTTTCGTCATTGA..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
................GGTTTCGATGATATGACTGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...............................................................................................................................................................................................GTTTC-GAG----C------ATTGGCCAAA-AA..............................................................................................................................................................................................................................................................................2111.001100000
......................................................ATAACT--CGTTTCGTCATTGAGT................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................TTCGTT------TCTGTT----TTTCTTT-----------C-CA---------CT---TT...................................................2611.001100000
.........................................................................TGAGTTAA------------------------------------------CACAT-TTAAGT.......................................................................................................................................................................................................................................................................................................................................................................1911.001000001
................................................................................................................................................................................................TTTC-GAG----C------ATTGGCCAAA-AA..............................................................................................................................................................................................................................................................................2011.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAGTTCCACATCTGGATT.........2111.001100000
........................................................AACT--CGTTTCGTCATTGAGT................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
..................................GAGAAGGTTTACAAAAGTAAATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
......................GATGATATGACTGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
........................................................................TTGAGTTAA------------------------------------------CACAT-TTAAGT.......................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..............................GACTGAGAAGGTTTACAAAAGTAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TT-----------C-CA---------CT---TTTTAAAATGCGAAAACGCG.................................2711.001100000
...............................................................................................................................................................................................GTTTC-GAG----C------ATTGGCCAAA-AAC.............................................................................................................................................................................................................................................................................2211.001000010
droGri2
GAACATTCAGGACTCGAGCTTCGATGACATGACTGAGAAGGTTTACAAAAGTAAATAACT--CGTTCCGTCATT--------------------------------------------GAGTTTACAT-TTAAGTTGAAAA--AAGAAAACAA-GAAA--AAAC------AAA----ATATG---TTTTTGGTTTC-GAG----C------ATTGGCCAAA-------------------AA-CTTAGACAT--------------A--TAGACCGT-GTAA-TTGAAATAACATTT-TAA-------ACGTTT--CATCTTATATCT------------CTCT---TTTTC---TCTTTGCCAAC---CAATTTTCTATCCATTTCGT------TCTGTTCAACTTTCTGCTCTTTTATTCCC-TA-----------------------------ACGCGCA-ACGCAGTC-------------------CCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................................................................................................................................................................................................................................................................................................................................TTGCCAAC---CAATTTTCTATCC................................................................................................................2111.00110
...............GAGCTTCGATGACATGACTGAGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
..........................................................................................................................................................................AAA----ATATG---TTTTTGGTTTC-GAG----..................................................................................................................................................................................................................................................................................................2211.00110
...........................................................................................................................................................................................................................................................................................................................................................................AAC---CAATTTTCTATCCATTTCGT------TCT................................................................................................2611.00101
................AGCTTCGATGACATGACTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
................................................................................................................................................................................................................................................AA-CTTAGACAT--------------A--TAGACCGT-GTAA-T..................................................................................................................................................................................................................2511.00101
droAna3
GAACATCCAGGACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAACAAAA--------------A---------AAC-CCATTGTG---CTTTTGGTTCG-ATT----CACCAAAATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTTAATAA-TTGA-GTAACTTCT-AAC-------GCGTTTTCCTTCAACCATCT------------CTCTCA-CTCTC---TTTTTGCAACC---GT-----------ATTTGGT------TTTGTTAACGTTTTTCT------ATT--C-CA-----------------------------TCGCGCA-ACCCAGTA-------------------CCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................CGATGACATGACCGAGAAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002010010
......................................................................................................................................................................................................................................................................................................................................................CTCA-CTCTC---TTTTTGCAACC---GT-----------ATTTG...........................................................................................................2712.002110000
...................................................................................................................................................................................................................ATTGGCCAA--------------------AA-CTTAGAC....................................................................................................................................................................................................................................................1812.002020000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CT------ATT--C-CA-----------------------------TCGCGCA-ACCC..........................1912.002011000
.................................................................................................................................................................................TTGTG---CTTTTGGTTCG-ATT----CACC..............................................................................................................................................................................................................................................................................................2311.001010000
.......................................................................................................................................................................................................................................................................................................CT-AAC-------GCGTTTTCCTTCAACCATCT------------..........................................................................................................................................................2511.001000010
..........................................TTACAAAAGTAAATAGCTCTCGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
.................................................................................................................................................................................................................AAATTGGCCAA--------------------AA-CTTAGACA------------------TA...............................................................................................................................................................................................................................2311.001010000
.................................................................................................................................................................................................................................................................................................................................................................................GT-----------ATTTGGT------TTTGTTAACGTTTTT....................................................................................2411.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TTTCT------ATT--C-CA-----------------------------TCGCGCA-ACCCAGTA-------------------CCC2911.001010000
....................................................AAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAA.........................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
................................................................................................................................................................................................................AAAATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCT...........................................................................................................................................................................................................................2811.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................T------ATT--C-CA-----------------------------TCGCGCA-ACCCAG........................2011.001000001
................GGCTTCGATGACATGACCGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.......................................................................................................................................................................................................................................................................................................................................................TCA-CTCTC---TTTTTGCAACC---.............................................................................................................................1911.001010000
...............................................AAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
................................................................................................................................................................................ATTGTG---CTTTTGGTTCG-ATT----CACC..............................................................................................................................................................................................................................................................................................2411.001010000
.........................GACATGACCGAGAAGGTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CT------ATT--C-CA-----------------------------TCGCGCA-ACCCAGTA-------------------CCC2611.001010000
...................................................................................................................................................................................................................................................................................TTAATAA-TTGA-GTAACTTCT-AAC-------GCGT......................................................................................................................................................................................2711.001001000
................................................................................................................................................................................................................AAAATTGGCCAA--------------------AA-CTTAGA.....................................................................................................................................................................................................................................................2011.001010000
................................................................................................................................................................................................................AAAATTGGCCAA--------------------AA-CTTAGAC....................................................................................................................................................................................................................................................2111.001010000
........................................................AGCTCTCGTTTTG--ATTAAC------------------------------------AAA..........................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
......................................................................................................................................................................................................TT----CACCAAAATTGGCCAA--------------------AA-CTTAGA.....................................................................................................................................................................................................................................................2611.001010000
GAACATCCAGGACTCTGGCTTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
......................GATGACATGACCGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
...............................................................................................................................................................................CATTGTG---CTTTTGGTTCG-A........................................................................................................................................................................................................................................................................................................1911.001100000
......................................................................................................................................................................................................................................................................................................................................................CTCA-CTCTC---TTTTTGCAACC---.............................................................................................................................2011.001001000
................................................................................................................................................................................................................AAAATTGGCCAA--------------------AA-CTTAGACA------------------T................................................................................................................................................................................................................................2311.001010000
.................................................................TTTG--ATTAAC------------------------------------AAAAAGAGTTTACT...............................................................................................................................................................................................................................................................................................................................................................................2411.001000010
........................................................................................................................................................................................................................................................................................................................TTTCCTTCAACCATCT------------CTCTCA-CTCTC---...........................................................................................................................................2711.001010000
.....................................................AATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAG.......................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
....................................................AAATAGCTCTCGTTTTG--ATTAAC------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..................................................................................................................................................................................................................................................................................................AACTTCT-AAC-------GCGTTTTCCTT...............................................................................................................................................................................2111.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTAACGTTTTTCT------ATT--C-CA-----------------------------TCGC..................................2711.001010000
.................................................................................................................................................................................................................AAATTGGCCAA--------------------AA-CTTAGAC....................................................................................................................................................................................................................................................2011.001010000
...................................................................................................................................................................................................................ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTC.........................................................................................................................................................................................................................2711.001010000
................GGCTTCGATGACATGACCGAGAAGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.......................ATGACATGACCGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
...................................................................................................................................................................................................................ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCC............................................................................................................................................................................................................................2411.001010000
..........................................................................................................................................................................................................................AA--------------------AA-CTTAGACA------------------TAGCCTTTATA......................................................................................................................................................................................................................2311.001100000
................................................................................................................................................................................................................AAAATTGGCCAA--------------------AA-CTTAGACA------------------TAGC.............................................................................................................................................................................................................................2611.001010000
..................................GAGAAGGTTTACAAAAGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...............................................................................................................................................................................................................CAAAATTGGCCAA--------------------AA-CTTAGACA------------------T................................................................................................................................................................................................................................2411.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................C-CA-----------------------------TCGCGCA-ACCCAGTA-------------------CCC2111.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................ATTTGGT------TTTGTTAACGTTTTT....................................................................................2211.001010000
.............................................................................................................................................CAAAA--------------A---------AAC-CCATTGTG---CTT..................................................................................................................................................................................................................................................................................................................2011.001010000
.................................................................TTTG--ATTAAC------------------------------------AAAAAGAGT....................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
droBip1
GAACATCCAGGACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTCAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAA--AAA--------------A---------CAC-CCATTGTG---CTTTTGGTTCG-ATT----CCC--ACATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTTAATAA-TTGA-GTAATTTCT-AAC-------GCGTTTTCCTTCAACCATCT------------CTCTCA-CTCTC---TTTTTGCTACC---GT-----------ATTTGGT------TTTGTTAACGTTTCTCT------ATT--C-CA-----------------------------TCGCGCC-ACCCAGTA-------------------CCCSizeHit CountTotal NormTotal
No Reads
droKik1
GAACATCCAGGACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCTTTTTG--ATCCACCAAA---AAC-----------------------AAACAAAAGAGTTTACTTTTTAAGTTGAAAA--ACAAACA--A-AAA-ACACACA--AAACAC----TTGTG---CTTTTGGTTCC-AAAACATTTA----ATTGGCCCAA-------------------AACCTTAGACCT-----------------TAGACTTA-ATAA-CTGA-GTTACTTCT-AAC-------GCGTTCTCCGTACTC--TCC------------CTC-----TCTC---TTTTTGCTACC---AAATT--------CTTTGGTGGATTCTCTGTTAACGTTTCTCC--ATATATTCCC-GC-----------------------------TTTCG------CTGTA-------------------GCCSizeHit CountTotal NormTotal
No Reads
droFic1
GAACATCCAGGACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAA-----------------------------CAC----TTGTGCA-CTTTTGGTTCC-AAC----CAT----ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTT-ATAA-TTGA-GTAACTTCT-AAC-------GCGTTCTCCGTTAACCATCT------------CTC-----TTCCTACATTTTGCTATA---AA-----------ATTTCGT------TCTGTTAACGTTTCTCC-----------C-AA-----------------------------TCGCGCA-AACCAGTA-------------------GCCSizeHit CountTotal NormTotal
No Reads
droEle1
GAACATCCAGGACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAACA--C-------------------------ACAC----TTGTG---CTTTTGGTTTC-AAT----CAC----ATTGGCCCAA-------------------AA-CTTAGACGT--------------T--TAGCCCTT-ACAA-TTGA-GTAA-TTCT-AAC-------GCGTTCTCCGTACCTCATCT------------CTC-----TTCC--ATTTTTGCTACC---AA-----------ATTTCGT------TCTGTTAACGTTTCTCC-----------C-AA----------------------------ATCGCGCC-ATCCAGTA-------------------GCCSizeHit CountTotal NormTotal
No Reads
droRho1
GAACATCCAGGACTCTGGCTTTGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAA-----------------------------CAC----TTGTG---CTTTTGGTTTC-AAT----CAC----ATTGGCCCAA-------------------AA-CTTAGACA------------------TAGCCTTT-ATAA-TTGA-GTAACTTCT-AAC-------GCGTTCTCCGTAACTCATCT------------CTC-----TTCC--ATTTTTGCTACC---AA-----------ATTTCGT------TCTGTTAACGTTTCTCC-----------C-AA-----------------------------TCGCGCA-ACACAGTA-------------------GCCSizeHit CountTotal NormTotal
No Reads
droBia1
CAACATCCAGGACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--AATAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAA-----------------------------CAC----TTGTG---CTTTTGGTTTC-CAA----CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTT-ATAA-CTGA-GTAACTTCT-AAC-------GCGTTCTCCGTACCCCATCT------------CTCT---CTTCT---ACTTTGCTACC---AA-----------ATTTCGT------TCTGTTAACGTTTCTCC-----------C-AA-----------------------------TCGCGCA-ACCCAGTA-------------------GCCSizeHit CountTotal NormTotal
No Reads
droTak1
CAACATCCAGGACTCTGACTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--AATAAC------------------------------------CGAAAGAGTTTACTT-TTAAGTTAAAAA-----------------------------CAC----TTGTG---CTTTTGGTTCACAAT----CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTT-ATAA-TTGA-GTAACTTCT-AAC-------GCGTTCTCCGTACCCCATCT------------CTCT---C-TCC---TTTTTGCTACC---AA-----------ATTTCGT------TCTGTTAACGTTTCTCC-----------C-AA-----------------------------TCGCACA-ACCCAGTA-------------------GCCSizeHit CountTotal NormTotal
No Reads
droEug1
GAACATCCAGGACTCTGGCTTTGATGACATGACTGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAA-----------------------------CAC----TTGTG---CTTTTGGTTTC-AAC----CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTT-ATAA-CTGA-GTAATTTCT-AAC-------GCGTTCTCCGTACTCCATCT------------CTC-----TTCC---CTTTTGCTATG---AA-----------ATTTCGT------TCTGTTAATGTTTCTCC-----------T-AA-----------------------------TCGCGCA-ACAAAGTA-------------------GCCSizeHit CountTotal NormTotal
No Reads
dm3
TAACATCCAGGACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAA-----------------------------CAC----TTGTA---CTTTTGGTTTC-AAT----CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTC-ATAA-TTGA-GTAATTTCT-AAC-------GCGTTTTCCGTACTCCATCT------------CTC-----TTCC---TATTTGCCGCA-CAAA-----------ATTTCGT------TCTGTTAACGTTTCACC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................TTCACC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GCC27126.00260000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000010000200010000000000000000000000000000000000000000000000000000000001000000000030000000001000000000000000610000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TCACC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GCC26124.00240000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000110100220000000000000000000000000000000000000000000000000000000000005000000000030000100000000000000001010300000
....ATCCAGGACTCTGGCTTCGATGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005500000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TTCACC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GC.26112.00120000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020101100000000000000000000000000000000000000000000000000000000000000000000000010000210000000000000000100100000
...................TTCGATGACATGACCGAGAAGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................24112.00120000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000100000000001000000000000001000000000000000200000
.........................................................................................................................................................................................................................................................................................................................TTCCGTACTCCATCT------------CTC-----TTCC---TATT.......................................................................................................................................26111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030205010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................CTGTTAACGTTTCACC-----------C-GA-----------------------------T.....................................20110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TCACC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GC.25110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100101000000000000000000000000000000000000000000000000000000000000002000000001000000120000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................TTTGCCGCA-CAAA-----------ATTTCGT------TCTGT..............................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000200000202000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TTCCGTACTCCATCT------------CTC-----TTCC---TA.........................................................................................................................................2417.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013010000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TTTCACC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GCC2817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020210100000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GCA-CAAA-----------ATTTCGT------TCTGT..............................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TCT-AAC-------GCGTTTTCCGTACTCCATC.......................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101100010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................................................................................................C-ATAA-TTGA-GTAATTTCT-AAC-------GCG.......................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TAACGTTTCACC-----------C-GA-----------------------------TCGCGCA-ACCCAG........................2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000
....................................................................................................................................................................................................................................................................................................................................................................................................T------TCTGTTAACGTTTCACC-----------C-GA-----------------------------TCGCGC................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000400000
..........................................................................................................................................................................................................................................................A------------------TAGCCTTC-ATAA-TTGA-GT............................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................CGTTTTG--ATTAAC------------------------------------AAAAAGAGA....................................................................................................................................................................................................................................................................................................................................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................T-AAC-------GCGTTTTCCGTACTCCATCT------------CTC-----..................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TTCC---TATTTGCCGCA-CAAA-----------ATTTCGT------...................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TCT-AAC-------GCGTTTTCCGTACTCCATCT------------C.........................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100100000
................................................................................................................................................................................................................................................................................................................................................................................AAA-----------ATTTCGT------TCTGTTAACGTT.......................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TCT------------CTC-----TTCC---TATTTGCCGCA-CAAA-----------ATT.............................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CACC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GCC2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001000000000010000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................TTCACC-----------C-GA-----------------------------TCGCGCA-ACCCAGT.......................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TTC-AAT----CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------.................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTCGATGACATGACCGAGAAGGTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.AACATCCAGGACTCTGGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................AAC-------GCGTTTTCCGTACTCCATCT------------C.........................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................AATTTCT-AAC-------GCGTTTTCCGT...............................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................CA-CAAA-----------ATTTCGT------TCTGTTAACGTT.......................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
....................................................................G--ATTAAC------------------------------------AAAAAGAGTTTACT...............................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TAACGTTTCACC-----------C-GA-----------------------------TCGCGC................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TC-AAT----CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------.................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................AAAAGTAAATAGCTCTCGTTTTG--ATT....................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................AAT----CAC----ATTGGCCAA--------------------AA-CTTAGAC....................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................GGCCAA--------------------AA-CTTAGACA------------------TAGC.............................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................T------TCTGTTAACGTTTCACC-----------C-GA-----------------------------TCGCGCA-..............................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................ACAAAAGTAAATAGCTCTCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000010000000000000000
...................................................TAAATAGCTCTCGTTTTG--ATT....................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGGCTTCGATGACATGACCGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CC---TATTTGCCGCA-CAAA-----------ATTTCGT------TC.................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................AACGTTTCACC-----------C-GA-----------------------------TCGCGCA-ACCCAG........................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.......CAGGACTCTGGCTTCGATGACATGACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................TGTTAACGTTTCACC-----------C-GA-----------------------------TCGCGCA-..............................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TAGCTCTCGTTTTG--ATTAAC------------------------------------AA...........................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................AAGAGTTTACTT-TTAAGTTGA....................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................T------TCTGTTAACGTTTCACC-----------C-GA-----------------------------TCGCG.................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ACC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GC.2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................GAAGGTTTACAAAAGTAAATAGCTCTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................A-GTAATTTCT-AAC-------GCGTTTTC..................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TC-AAT----CAC----ATTGGCCAA--------------------AA-CTTAGA.....................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AA-----------ATTTCGT------TCTGTTAACGTT.......................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................TTCT-AAC-------GCGTTTTCCGTACTCCATC.......................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...................................................................................................................................................................................................................................................................................TC-ATAA-TTGA-GTAATTTCT-AAC-------GCG.......................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CAACATCCAGGACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAA-----------------------------CAC----TTGTG---CTTTTGGTTTC-AAT----CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTC-ATAA-TTGA-GTAATTTCT-AAC-------GCGTTTTCCGTACTCCATCT------------CTC-----TTCC---TATTTGCCGCA-CAAA-----------ATTTCGT------TCTGTTAACGTTTCTCC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................................................................................................TGCCGCA-CAAA-----------ATTTCGT------TCTGTT.............................................................................................2414.00400000030001000000
...................TTCGATGACATGACCGAGAAGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00300000012000000000
.....................................................................................................................................................................................................................................................................................................................................................................TTTGCCGCA-CAAA-----------ATTTCGT------TCTGTT.............................................................................................2613.00300000030000000000
...............................................................................................................................................................................................................................................................................................................................ACTCCATCT------------CTC-----TTCC---TATTTGCCGCA-...............................................................................................................................2712.00200200000000000000
......................................................................................................................................................................................................................................................................................................................................................................TTGCCGCA-CAAA-----------ATTTCGT------TCTGTT.............................................................................................2512.00200000010010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GC.2612.00200000000002000000
......................................................ATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAG.......................................................................................................................................................................................................................................................................................................................................................................................2712.00200200000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TCTCC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GC.2512.00200000010001000000
.....TCCAGGACTCTGGCTTCGATGACAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000000000020000
...................................................................TG--ATTAAC------------------------------------AAAAAGAGTTTACTT-T............................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................TCC---TATTTGCCGCA-CAAA-----------ATTTCGT------...................................................................................................2511.00100010000000000000
............................................................................................................................................................................................................CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCT...........................................................................................................................................................................................................................2811.00101000000000000000
............................................................CTCGTTTTG--ATTAAC------------------------------------AAAAA........................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................GCA-CAAA-----------ATTTCGT------TCTGTT.............................................................................................2011.00100100000000000000
......................................................................................................................................................................................................AT----CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------TAGC.............................................................................................................................................................................................................................2811.00100000001000000000
......................................................................................................................GAGTTTACTT-TTAAGT.......................................................................................................................................................................................................................................................................................................................................................................1611.00100000010000000000
......................GATGACATGACCGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................TGCCGCA-CAAA-----------ATTTCGT------TCTG...............................................................................................2211.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................AAA-----------ATTTCGT------TCTGTTAACG.........................................................................................2011.00100000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGCA-ACCCAGTA-------------------GC.1611.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................TTTGCCGCA-CAAA-----------ATTTCGT------TCTGT..............................................................................................2511.00100000010000000000
..........................................TTACAAAAGTAAATAGCTCTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
....................................................................................................................................................................................................................................................................................................TTTCT-AAC-------GCGTTTTCCGTACTCCATC.......................................................................................................................................................................2711.00100000001000000000
.....TCCAGGACTCTGGCTTCGATGACATGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
......................................................................................................................................................................................................................................................................................................................................................................TTGCCGCA-CAAA-----------ATTTCGT------TCTGT..............................................................................................2411.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................ATTTGCCGCA-CAAA-----------ATTTCGT------TC.................................................................................................2311.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCTCC-----------C-GA-----------------------------TCGCGCA-ACCC..........................2211.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................AA-----------ATTTCGT------TCTGTTAACG.........................................................................................1911.00100000010000000000
.......CAGGACTCTGGCTTCGATGACATGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................TTCCGTACTCCATCT------------CTC-----TTCC---TAT........................................................................................................................................2511.00100001000000000000
..................................................................................................................................................................................................................................................................................................AATTTCT-AAC-------GCGTTTTCCGT...............................................................................................................................................................................2111.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TGCCGCA-CAAA-----------ATTTCGT------TCTGTTAA...........................................................................................2611.00100000001000000000
....ATCCAGGACTCTGGCTTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
..............CTGGCTTCGATGACATGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.......................................................................................................................................................................................................................GCCAA--------------------AA-CTTAGACA------------------TAGCCC...........................................................................................................................................................................................................................2111.00110000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTCTCC-----------C-GA-----------------------------TCGCGCA-ACCC..........................2311.00100100000000000000
............................................................................................................................................................................................................CAC----ATTGGCCAA--------------------AA-CTTAGAC....................................................................................................................................................................................................................................................2111.00100000000000100000
..................................................................................................................................................................................................................................................................................................AATTTCT-AAC-------GCGTTTTCCGTACTCCA.........................................................................................................................................................................2711.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................TATTTGCCGCA-CAAA-----------ATTTCGT------TCTGTT.............................................................................................2811.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................CGCA-CAAA-----------ATTTCGT------TCTGTTAACGTT.......................................................................................2711.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CGT------TCTGTTAACGTTTCTCC-----------C-.....................................................................2111.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TTCGT------TCTGTTAACGTTTCTCC-----------C-.....................................................................2311.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TTCGT------TCTGTTAACGTTTCTCC-----------C-G....................................................................2411.00100000001000000000
.................................................................TTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-T............................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CGCA-CAAA-----------ATTTCGT------TCTGTTAACGTTT......................................................................................2811.00100010000000000000
.........................................................................................................................................................................................................................................................................................A-TTGA-GTAATTTCT-AAC-------GCGTTTTCCG................................................................................................................................................................................2711.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................TATTTGCCGCA-CAAA-----------ATTTCGT------TCTGT..............................................................................................2711.00100000000100000000
........AGGACTCTGGCTTCGATGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
.......................................................................................................................................................................................................T----CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------T................................................................................................................................................................................................................................2411.00100000001000000000
...........................................TACAAAAGTAAATAGCTCTCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
..................................................GTAAATAGCTCTCGTTTTG--AT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
....................................................................................................................................................................................................................................................TTAGACA------------------TAGCCTTC-ATAA-TTGA-GT............................................................................................................................................................................................................2511.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................TTCGT------TCTGTTAACGTTTCTCC-----------C-GA-----------------------------TCG...................................2811.00100000010000000000
.......................................................................................................................................................................................................................................................................................TAA-TTGA-GTAATTTCT-AAC-------GCGTTTTC..................................................................................................................................................................................2711.00100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................TCGT------TCTGTTAACGTTTCTCC-----------C-GA-----------------------------TCG...................................2711.00100000000001000000
CAACATCCAGGACTCTGGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
...................................................................................................................................................................................................................ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCC...........................................................................................................................................................................................................................2511.00100100000000000000
..................................................................................................................................................................................................................................................................................TTC-ATAA-TTGA-GTAATTTCT-AAC-------GCGTT.....................................................................................................................................................................................2811.00100000001000000000
................GGCTTCGATGACATGACCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
......................................................................................................................GAGTTTACTT-TTAAGTTGAAA..................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................AAA-----------ATTTCGT------TCTGTTAACGTTTCT....................................................................................2511.00100010000000000000
.............................................................................................................................................................................................................AC----ATTGGCCAA--------------------AA-CTTAGAC....................................................................................................................................................................................................................................................2011.00100010000000000000
.......CAGGACTCTGGCTTCGATGACATGACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
.................................................................................................................................................................................................TTC-AAT----CAC----ATTGGCCAA--------------------AA-CTTAGA.....................................................................................................................................................................................................................................................2611.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................GCA-CAAA-----------ATTTCGT------TCTGG..............................................................................................1920.50100100000000000000
droSec2
CAACATCCAGGACTCTGGCTTCGATGACATGACCGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAA-----------------------------CAC----TTGTG---CTTTTGGTTTC-AAT----CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTC-ATAA-TTGA-GTAATTTCT-AAC-------GCGTTTTCCGTACTCCATCT------------CTC-----TTCC---TATATGCCGCA-AAAA-----------ATTTCGT------TCTGTTAACGTTTCTCC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................................A------------------TAGCCTTC-ATAA-TTGA-GT............................................................................................................................................................................................................1915.0050050
...............................................................................................................................................................................................GTTTC-AAT----CAC----ATTGGCCAA--------------------..............................................................................................................................................................................................................................................................2012.0020020
..........................................................................................................................................................................................................................................................................................................AAC-------GCGTTTTCCGTACTCCATCT------------CTC-----T.................................................................................................................................................2711.0010010
................................................................................................................................................................................................................................................AA-CTTAGACA------------------TAGCCTTC-ATAA-TTGA-GT............................................................................................................................................................................................................2811.0010010
..........................................TTACAAAAGTAAATAGCTCTCGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
....................................................................................................................AAGAGTTTACTT-TTAAGTTGA....................................................................................................................................................................................................................................................................................................................................................................2111.0010100
................................................................................................................................................................................................................................................AA-CTTAGACA------------------TAGCCTTC-ATAA-TTGA-..............................................................................................................................................................................................................2611.0011000
.....................................................AATAGCTCTCGTTTTG--ATTAAC------------------------------------AAA..........................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
...............TGGCTTCGATGACATGACCGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
......................................................ATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAA........................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
........AGGACTCTGGCTTCGATGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...CATCCAGGACTCTGGCTTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
....................TCGATGACATGACCGAGAAGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
...................................................................................................................AAAGAGTTTACTT-TTAAGTTGAA...................................................................................................................................................................................................................................................................................................................................................................2311.0010010
......................GATGACATGACCGAGAAGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.........................GACATGACCGAGAAGGTTTACAAAAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
..................................................................TTG--ATTAAC------------------------------------AAAAAGAGTTTACT...............................................................................................................................................................................................................................................................................................................................................................................2311.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTCC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GC.2711.0011000
..................................................................................................................AAAAGAGTTTACTT-TTAAGTTGAAA..................................................................................................................................................................................................................................................................................................................................................................2511.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................GTTAACGTTTCTCC-----------C-GA-----------------------------TCGCGCA-ACC...........................2711.0011000
....................................................................G--ATTAAC------------------------------------AAAAAGAGTTTACT...............................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..............................................................................................................................................................................................................................................................................AGCCTTC-ATAA-TTGA-GTA...........................................................................................................................................................................................................1811.0010010
......................................................................................................................................................................................................................GGCCAA--------------------AA-CTTAGACA------------------TAG..............................................................................................................................................................................................................................1911.0010010
...........................................................................................................................................................................................................................................................................................TTGA-GTAATTTCT-AAC-------GCG.......................................................................................................................................................................................1911.0010010
......................................................ATAGCTCTCGTTTTG--ATTAAC------------------------------------AAA..........................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
..............CTGGCTTCGATGACATGACCGAGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
....................................................AAATAGCTCTCGTTTTG--ATTAAC------------------------------------A............................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
...................................................................................................................AAAGAGTTTACTT-TTAAGTTGAAAA-----------------------------....................................................................................................................................................................................................................................................................................................................................2511.0010010
..................................................................TTG--ATTAAC------------------------------------AAAAAGAGT....................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................TCC-----------C-GA-----------------------------TCGCGCA-ACCCAGT.......................2011.0010010
....................................................................................................................................................................................................................................................TTAGACA------------------TAGCCTTC-ATAA-TTGA-GT............................................................................................................................................................................................................2511.0010010
.............................................................................................................................................................................................................................................................................................................................GTACTCCATCT------------CTC-----TTCC---TATATGCCG..................................................................................................................................2711.0011000
...............................................................................................................................................................................................................................................................................................................................................................................................TTTCGT------TCTGTTAACGTTTCTCC-----------C-GA-----------------------------......................................2611.0011000
..................................................................................................................................................................................................................................................................................................AATTTCT-AAC-------GCGTTTTCCGT...............................................................................................................................................................................2111.0010010
.................................................................TTTG--ATTAAC------------------------------------AAAAAGAGTTACT................................................................................................................................................................................................................................................................................................................................................................................2340.2510010
droYak3
CAACATCCAGGACTCTGGCTTCGATGACATGACTGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAA-----------------------------CAC----TTGTG---CTTTTGGTTTC-AAT----CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTT-ATAA-TTGA-GTAATTTCT-AAC-------GCGTTTTCCGTACTCCATCT------------CTC-----TTCC---TATTTGCCACC--AAA-----------ATTTCGT------TCTGTTAACGTTTCTCC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................AAGAGTTTACTT-TTAAGTTGAAA..................................................................................................................................................................................................................................................................................................................................................................2313.00300000030000
.........................GACATGACTGAGAAGGTTTACAAAAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000020000
....................................................................G--ATTAAC------------------------------------AAAAAGAGTTTACT...............................................................................................................................................................................................................................................................................................................................................................................2112.00200000020000
....................................................................................................................................AGTTGAAAA-----------------------------CAC----TTGTG---CTTTTGGT.............................................................................................................................................................................................................................................................................................................2511.00100010000000
............................................ACAAAAGTAAATAGCTCTCGTTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.....................................................AATAGCTCTCGTTTTG--ATTAAC------------------------------------A............................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................CTCC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GC.2411.00100100000000
.........................................................................................................................................................................................................................................................................................A-TTGA-GTAATTTCT-AAC-------GCGTTTTCC.................................................................................................................................................................................2611.00101000000000
.................................................................TTTG--ATTAAC------------------------------------AAAAAGAGTTTAC................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
..................................................GTAAATAGCTCTCGTTTTG--.......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................TGCCACC--AAA-----------ATTTCGT------TCTGTT.............................................................................................2311.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CGT------TCTGTTAACGTTTCTCC-----------.......................................................................2011.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................AACGTTTCTCC-----------C-GA-----------------------------TCGCGC................................2011.00100000010000
........................................................AGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGA......................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000
...................................................................................................................AAAGAGTTTACTT-TTAAGTT......................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...............................................................................................................................................................................................................................................................................................................................ACTCCATCT------------CTC-----TTCC---TATTTGCCACC--A.............................................................................................................................2811.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GTTAACGTTTCTCC-----------C-GA-----------------------------TCGCGCA-ACCC..........................2811.00110000000000
..........................................................................................................................................................................................................................................................................................................................................................................CACC--AAA-----------ATTTCGT------TCTGTTAAC..........................................................................................2311.00110000000000
....ATCCAGGACTCTGGCTTCGATGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
...................................................................................................................................................................................................................................................................................................ATTTCT-AAC-------GCGTTTTCCGTACT............................................................................................................................................................................2311.00100000010000
...........................CATGACTGAGAAGGTTTACAAAAGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................ATTTCGT------TCTGTTAACGTTTCTCC-----------C-GA-----------------------------TC....................................2911.00110000000000
..................................................................................................................................................................................................................................................................................................AATTTCT-AAC-------GCGTTTTCC.................................................................................................................................................................................1911.00100100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GCC2111.00101000000000
.........................................................................................................................................................................................................................................................................................................................TTCCGTACTCCATCT------------CTC-----TTCC---T..........................................................................................................................................2311.00100010000000
..................................................GTAAATAGCTCTCGTTTTG--AT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...........................CATGACTGAGAAGGTTTACAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
....................................................AAATAGCTCTCGTTTTG--ATTAAC------------------------------------AA...........................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
...................................................................TG--ATTAAC------------------------------------AAAAAGAGTTTACTT-T............................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...............................................................................................................................................................................................GTTTC-AAT----CAC----ATTGGCCAA--------------------AA-CTT........................................................................................................................................................................................................................................................2511.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................CC---TATTTGCCACC--AAA-----------ATTTCGT------TCTGT..............................................................................................2811.00100100000000
.....................CGATGACATGACTGAGAAGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.....................................................................................................................................GTTGAAAA-----------------------------CAC----TTGTG---CC...................................................................................................................................................................................................................................................................................................................1811.00100100000000
...................................................................................................................................................................................................................................................................................................................................................................................................GT------TCTGTTAACGTTTCTCC-----------C-.....................................................................2011.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................A-----------ATTTCGT------TCTGTTAACGTTTCTCC-----------C-.....................................................................2611.00100100000000
.........GGACTCTGGCTTCGATGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
.....................CGATGACATGACTGAGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ATTTCGT------TCTGTTAACGTTTCTCC-----------C-GA-----------------------------T.....................................2811.00100100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TCTCC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GCC2611.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................ATTTCGT------TCTGTTAACGTTTCTCC-----------C-GA-----------------------------C.....................................2811.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................CCACC--AAA-----------ATTTCGT------TCTGTT.............................................................................................2111.00101000000000
.....................CGATGACATGACTGAGAAGGTTTACAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
..........................................TTACAAAAGTAAATAGCTCTCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
...........................................................................AC------------------------------------AAAAAGAGTTTACTT-TTAAGTTG.....................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
..................................GAGAAGGTTTACAAAAGTAAATAGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................CTCC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GCC2511.00100100000000
....................................................AAATAGCTCTCGTTTTG--ATTAAC------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.......................................................................................................................................................................................................................................................................................TAA-TTGA-GTAATTTCT-AAC-------GCGTT.....................................................................................................................................................................................2411.00101000000000
......................................................................................................................................................................................................................................................................................ATAA-TTGA-GTAATTTCT-AAC-------GCGTT.....................................................................................................................................................................................2511.00100100000000
..ACATCCAGGACTCTGGCTTCGATGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000
......................................................................................................................................................................................................................................................................................................................................................C-----TTCC---TATTTGCCACC--AAA-----------................................................................................................................1911.00101000000000
.....................................................................................................................AGAGTTTACTT-TTAAGTTGAAAA-----------------------------C...................................................................................................................................................................................................................................................................................................................................2411.00100000010000
......................GATGACATGACTGAGAAGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
........................TGACATGACTGAGAAGGTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
............CTCTGGCTTCGATGACATGACTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
......................GATGACATGACTGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
......................GATGACATGACTGAGAAGGTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...................TTCGATGACATGACTGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.........................GACATGACTGAGAAGGTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................CTCC-----------C-GA-----------------------------TCGCGCA-ACCCAGT.......................2111.00100010000000
.................................TGAGAAGGTTTACAAAAGTAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000
.................................................................TTTG--ATTAAC------------------------------------AAAAAGAGTTTACT...............................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
............................................................................................................................................................................................TTGGTTTC-AAT----CAC----ATTGGCC....................................................................................................................................................................................................................................................................................2111.00100100000000
...................................................................TG--ATTAAC------------------------------------AAAAAGAGTTTACT...............................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEre2
CAACATCCAGGACTCTGGCTTCGATGACATGACTGAGAAGGTTTACAAAAGTAAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAAAGAGTTTACTT-TTAAGTTGAAAA-----------------------------CAC----TTGTG---CTTTTGGTTTC-AAT----CAC----ATTGGCCAA--------------------AA-CTTAGACA------------------TAGCCTTT-ATAA-TTGA-GTAATTTCT-AAC-------GCGTTTTCCGTACTCCATCT------------CTCT---CTTCC---TATTTGCCAAC--AAA-----------ATTTCGT------TCTGTTAACGTTTCTCC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................TGCCAAC--AAA-----------ATTTCGT------TCTGTTAACGT........................................................................................28120.002000000020
..............................................................................................................................................................................................................................................................................................................................................................................................................GTTAACGTTTCTCC-----------C-GA-----------------------------TCGCGCA-ACCCAG........................3018.0080000008
......................................................................................................................................................................................................................................................................................................................................................................................................................TTCTCC-----------C-GA-----------------------------TCGCGCA-ACCCAGTA-------------------GC.2613.0030000003
......................GATGACATGACTGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000020
..........................................TTACAAAAGTAAATAGCTCTCGTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000002
.........................GACATGACTGAGAAGGTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
....................................................................G--ATTAAC------------------------------------AAAAAGAGTTTACT...............................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
....................TCGATGACATGACTGAGAAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
....................................................................................................................AAGAGTTTACTT-TTAAGTTGA....................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
CAACATCCAGGACTCTGGCTTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
...............TGGCTTCGATGACATGACTGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
..........................ACATGACTGAGAAGGTTTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
..................................GAGAAGGTTTACAAAAGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.....TCCAGGACTCTGGCTTCGATGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
.........................................................................................................................................................................................................................................................CA------------------TAGCCTTT-ATAA-TTGA-GT............................................................................................................................................................................................................2011.0010000010
....................................................AAATAGCTCTCGTTTTG--ATTAAC------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
......................................................................................................................................................................................................................................................................................................................................CT------------CTCT---CTTCC---TATTTGCCAAC--AAA-----------AT..............................................................................................................2711.0011000000
......................................................ATAGCTCTCGTTTTG--ATTAA..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
..................................................................................................................................................................................................................................................................................................AATTTCT-AAC-------GCGTTTTCC.................................................................................................................................................................................1911.0010100000
....................................................AAATAGCTCTCGTTTTG--ATTAAC------------------------------------AA...........................................................................................................................................................................................................................................................................................................................................................................................2511.0010001000
............................ATGACTGAGAAGGTTTACAAAAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
........................................................................................................................................................................................................................................................................................................................TTTCCGTACTCCATCT------------CTCT---CTTC...............................................................................................................................................2411.0010100000
.......................................................................................................................................................................................................................................................GACA------------------TAGCCTTT-ATAA-TTGA-GTA...........................................................................................................................................................................................................2311.0010100000
..........................................................................................................................................................................................................................................................A------------------TAGCCTTT-ATAA-TTGA-GTAAT.........................................................................................................................................................................................................2211.0010000010
....................................................AAATAGCTCTCGTTTTG--ATTAAC------------------------------------AAA..........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
.........................GACATGACTGAGAAGGTTTACAAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................TTCGT------TCTGTTAACGTTTCTCC-----------C-GA-----------------------------T.....................................2611.0011000000
.....................................................................................................................AGAGTTTACTT-TTAAGTTGAA...................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
.....................................................AATAGCTCTCGTTTTG--ATTAAC------------------------------------AAAA.........................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
.....................CGATGACATGACTGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
.........................GACATGACTGAGAAGGTTTACAAAAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
........................TGACATGACTGAGAAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001000
.......................................GGTTTACAAAAGTAAATAGCTCTCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
CAACATCCAGGACTCTGGCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...........................................TACAAAAGTAAATAGCTCTCGTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
..................................GAGAAGGTTTACAAAAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100

Generated: 05/17/2015 at 11:43 PM