ID:

dps_955

 Coordinate:

3:1889395-1889505 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dpse\GA24638-cds]; exon [dpse_GLEANR_15149:17]; exon [dpse_GLEANR_15149:18]; CDS [Dpse\GA24638-cds]; intron [Dpse\GA24638-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------##################################################
GGAAGTTTTTCAAGTGCGTCAATGAAATGGGAGAATTGCTGCCAATTACTGTGAGTACACTACACACACTCCCAATATGGAGCAGGAGAACGATCTACCTGTCCTGTGTGACTGTACAAACCCACCCTACTCATATTTCCTTCTCCATTTATTGCGTGCAGGAGGTGAACGACAAGTGGGACTGCATTGAGCAGAACTACACGTGGATCAA
**************************************************.........((.(((.......((((((((((.(((((.................((((((..(((...........)))))))))))))).))))))..)))).))).))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 M022
male body		 GSM343916
embryo
 SRR902010
ovaries
 GSM444067
head
......................................................................................TGAACCATCTACCTGTCCTGT........................................................................................................ 21 2 1 337.00 337 332 4 1 0 0 0
.......................................................................................GAACCATCTACCTGTCCTGTT....................................................................................................... 21 2 1 280.00 280 280 0 0 0 0 0
......................................................................................TGAACCATCTACCTGTCCTG......................................................................................................... 20 2 1 266.00 266 266 0 0 0 0 0
........................................................................................AACCATCTACCTGTCCTGTTG...................................................................................................... 21 3 2 190.00 380 378 2 0 0 0 0
.....................................................................................TTGAACCATCTACCTGTCCTG......................................................................................................... 21 3 2 186.00 372 370 2 0 0 0 0
....................................................................................GTTGAACCATCTACCTGTCCT.......................................................................................................... 21 3 1 163.00 163 149 10 4 0 0 0
.......................................................................................GAACCATCTACCTGTCCTGTTGG..................................................................................................... 23 3 1 149.00 149 149 0 0 0 0 0
........................................................................................AACCATCTACCTGTCCTGTTGG..................................................................................................... 22 3 1 95.00 95 95 0 0 0 0 0
.......................................................................................GAACCATCTACCTGTCCTGTTG...................................................................................................... 22 3 1 80.00 80 79 1 0 0 0 0
.........................................................................................ACCATCTACCTGTCCTGTTGG..................................................................................................... 21 3 3 77.33 232 232 0 0 0 0 0
........................................................................................AACCATCTACCTGTCCTGTT....................................................................................................... 20 2 1 73.00 73 72 1 0 0 0 0
.......................................................................................GAACCATCTACCTGTCCTGT........................................................................................................ 20 1 1 47.00 47 47 0 0 0 0 0
......................................................................................TGAACCATCTACCTGTCCTGTT....................................................................................................... 22 3 1 27.00 27 27 0 0 0 0 0
.......................................................................................GAACCATCTACCTGTCCTG......................................................................................................... 19 1 1 21.00 21 21 0 0 0 0 0
..........................................................................................CCATCTACCTGTCCTGTTGG..................................................................................................... 20 3 8 15.50 124 124 0 0 0 0 0
.....................................................................................TTGAACCATCTACCTGTCCTGT........................................................................................................ 22 3 1 11.00 11 11 0 0 0 0 0
.....................................................................................TTGAACCATCTACCTGTCCT.......................................................................................................... 20 3 3 10.33 31 30 1 0 0 0 0
........................................................................................AACCATCTACCTGTCCTGT........................................................................................................ 19 1 1 9.00 9 9 0 0 0 0 0
.........................................................................................ACCATCTACCTGTCCTGTT....................................................................................................... 19 2 2 9.00 18 18 0 0 0 0 0
.........................................................................................ACCATCTACCTGTCCTGTTG...................................................................................................... 20 3 9 6.33 57 57 0 0 0 0 0
....................................................................................GTTGAACCATCTACCTGTCC........................................................................................................... 20 3 11 6.27 69 68 1 0 0 0 0
......................................................................................TGAACCATCTACCTGTCCT.......................................................................................................... 19 2 1 6.00 6 6 0 0 0 0 0
.......................................................................................GAACCATCTACCTGTCCTGTTA...................................................................................................... 22 3 1 6.00 6 6 0 0 0 0 0
........................................................................................AACCATCTACCTGTCCTG......................................................................................................... 18 1 1 5.00 5 5 0 0 0 0 0
....................................................................................GTTGAACCATCTACCTGTCCTG......................................................................................................... 22 3 1 5.00 5 5 0 0 0 0 0
.......................................................................................GAACCATCTACCTGTCCT.......................................................................................................... 18 1 1 4.00 4 4 0 0 0 0 0
............................................................................................ATCTACCTGTCCTGTTGG..................................................................................................... 18 2 2 4.00 8 8 0 0 0 0 0
......................................................................................TGAACCATCTACCTGTCCTGTA....................................................................................................... 22 3 1 3.00 3 3 0 0 0 0 0
....................................................................................GTTGAACCATCTACCTGTCCTGT........................................................................................................ 23 3 1 3.00 3 3 0 0 0 0 0
.......................................................................................GAACCATCTACCTGTCCTGTC....................................................................................................... 21 2 1 3.00 3 3 0 0 0 0 0
...........................................................................................CATCTACCTGTCCTGTTGG..................................................................................................... 19 3 20 2.60 52 52 0 0 0 0 0
......................................................................................TGAACCATCTACCTGTCCTGA........................................................................................................ 21 3 1 2.00 2 2 0 0 0 0 0
.........................................................................................ACCATCTACCTGTCCTGTTGGA.................................................................................................... 22 3 2 2.00 4 4 0 0 0 0 0
.......................................................................................GAACCATCTACCTGTCCTGTTT...................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................GAACCATATACCTGTCCTGTT....................................................................................................... 21 3 1 1.00 1 1 0 0 0 0 0
.....................................................................................GTGAACCATCTACCTGTCCTG......................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
......................................................................................TGAACCATCTACCTGTCCTGG........................................................................................................ 21 3 1 1.00 1 1 0 0 0 0 0
.......................................................................................TAACCATCTACCTGTCCTGTC....................................................................................................... 21 3 1 1.00 1 1 0 0 0 0 0
......................................................................................CGAACCATCTACCTGTCCTGTT....................................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0
.......................................................................................GAACCATCTACCTGTCCTGTCA...................................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0
.....................................................................................GTGAACCATCTACCTGTCCTGT........................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
......................................................................................TGGACCATCTACCTGTCCTGT........................................................................................................ 21 3 1 1.00 1 1 0 0 0 0 0
.....................................................................................ATGAACCATCTACCTGTCCTGT........................................................................................................ 22 3 1 1.00 1 1 0 0 0 0 0
.........................................................................................ACCATCTACCTGTCCTTTG....................................................................................................... 19 2 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................TTATTGCGTGCAGGAGGT............................................. 18 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................GTCCAGGAGGTGTACAACAAGT.................................. 22 3 1 1.00 1 0 0 0 1 0 0
......................................................................................TGAACCATCTACCCGTCCTGT........................................................................................................ 21 3 1 1.00 1 1 0 0 0 0 0
..........................................................................................CCATCTACCTGTCCTGTTG...................................................................................................... 19 3 20 0.90 18 18 0 0 0 0 0
.......................................................................................GAATCATCTACCTGTCCTGTT....................................................................................................... 21 3 2 0.50 1 1 0 0 0 0 0
.......................................................................................GAACCATCTACCTGTCCTT......................................................................................................... 19 2 2 0.50 1 1 0 0 0 0 0
..............................................................................................................................................................CAAGAGATGAACGACAAGCGG................................ 21 3 7 0.43 3 0 0 0 0 3 0
......................................................................................TGAACCATCTACCCGTCCTG......................................................................................................... 20 3 3 0.33 1 1 0 0 0 0 0
..........................................................................................CCATCTACCTGTCCTGTT....................................................................................................... 18 2 6 0.33 2 2 0 0 0 0 0
......................................................................................TGAACCATCTATCTGTCCTGT........................................................................................................ 21 3 3 0.33 1 1 0 0 0 0 0
.......................................................................................GAACCATCTACCCGTCCTGTT....................................................................................................... 21 3 3 0.33 1 1 0 0 0 0 0
.......................................................................................GAACCATCTACCTGTCCTTTT....................................................................................................... 21 3 3 0.33 1 1 0 0 0 0 0
......................................................................................TGAACCATCTACCTGTCCTGC........................................................................................................ 21 3 3 0.33 1 1 0 0 0 0 0
..................................ATTGCTGCCAATTGCTGTAA............................................................................................................................................................. 20 2 4 0.25 1 0 0 0 0 0 1
............................................................................................................AGATTGTACAAACCCAACCT................................................................................... 20 3 5 0.20 1 1 0 0 0 0 0
......................................................................................TGAACCATCTGCCTGTCCTG......................................................................................................... 20 3 8 0.13 1 1 0 0 0 0 0
......................................................................................TGAACCATCTACCTGTCCCG......................................................................................................... 20 3 9 0.11 1 1 0 0 0 0 0
........................................................................................AACCATCTACCTGTCCTGCT....................................................................................................... 20 3 10 0.10 1 1 0 0 0 0 0
....................................................................................GTTGAACCATCTACCTGTC............................................................................................................ 19 3 20 0.10 2 2 0 0 0 0 0
......................................................................................TGAACCATTTACCTGTCCTG......................................................................................................... 20 3 12 0.08 1 1 0 0 0 0 0
..........................................................................................CCATCTACCTGTCCTTTG....................................................................................................... 18 2 17 0.06 1 1 0 0 0 0 0

Anti-sense strand reads

CCTTCAAAAAGTTCACGCAGTTACTTTACCCTCTTAACGACGGTTAATGACACTCATGTGATGTGTGTGAGGGTTATACCTCGTCCTCTTGCTAGATGGACAGGACACACTGACATGTTTGGGTGGGATGAGTATAAAGGAAGAGGTAAATAACGCACGTCCTCCACTTGCTGTTCACCCTGACGTAACTCGTCTTGATGTGCACCTAGTT
**************************************************.........((.(((.......((((((((((.(((((.................((((((..(((...........)))))))))))))).))))))..)))).))).))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 M022
male body		 M059
embryo
 GSM444067
head
 SRR902011
testis
.......................................................................................CTTGGTAGATGGACAGGACAA....................................................................................................... 21 2 1 69.00 69 55 5 9 0 0 0
........................................................................................TTGGTAGATGGACAGGACAAC...................................................................................................... 21 3 2 61.00 122 102 17 3 0 0 0
......................................................................................ACTTGGTAGATGGACAGGAC......................................................................................................... 20 2 1 45.00 45 36 9 0 0 0 0
.........................................................................................TGGTAGATGGACAGGACAACC..................................................................................................... 21 3 3 40.33 121 104 17 0 0 0 0
....................................................................................CAACTTGGTAGATGGACAGGA.......................................................................................................... 21 3 1 35.00 35 35 0 0 0 0 0
......................................................................................ACTTGGTAGATGGACAGGACA........................................................................................................ 21 2 1 33.00 33 30 3 0 0 0 0
.....................................................................................CACTTGGTAGATGGACAGGAC......................................................................................................... 21 2 1 26.00 26 24 2 0 0 0 0
.......................................................................................CTTGGTAGATGGACAGGACA........................................................................................................ 20 1 1 24.00 24 21 1 2 0 0 0
...................................................................................ACCACTTGGTAGATGGACAGGAC......................................................................................................... 23 3 1 21.00 21 20 1 0 0 0 0
........................................................................................TTGGTAGATGGACAGGAC......................................................................................................... 18 1 1 20.00 20 20 0 0 0 0 0
......................................................................................CCTTGGTAGATGGACAGGACA........................................................................................................ 21 2 1 20.00 20 13 3 4 0 0 0
....................................................................................CCACTTGGTAGATGGACAGGAC......................................................................................................... 22 2 1 19.00 19 14 1 4 0 0 0
.....................................................................................AACTTGGTAGATGGACAGGAC......................................................................................................... 21 3 2 15.00 30 27 3 0 0 0 0
........................................................................................TTGGTAGATGGACAGGACAA....................................................................................................... 20 2 1 12.00 12 11 1 0 0 0 0
.......................................................................................CTTGGTAGATGGACAGGAC......................................................................................................... 19 1 1 12.00 12 10 0 2 0 0 0
......................................................................................CCTTGGTAGATGGACAGGACAA....................................................................................................... 22 3 1 11.00 11 8 1 2 0 0 0
........................................................................................TTGGTAGATGGACAGGACAACC..................................................................................................... 22 3 1 7.00 7 5 2 0 0 0 0
..........................................................................................GGTAGATGGACAGGACAACC..................................................................................................... 20 3 8 5.38 43 41 2 0 0 0 0
.......................................................................................CTTGGTAGATGGACAGGACAAC...................................................................................................... 22 3 1 4.00 4 4 0 0 0 0 0
.......................................................................................CTTGGTAGATGGACAGGA.......................................................................................................... 18 1 1 4.00 4 2 0 2 0 0 0
.........................................................................................TGGTAGATGGACAGGACA........................................................................................................ 18 1 1 3.00 3 2 0 1 0 0 0
........................................................................................TTGGTAGATGGACAGGACA........................................................................................................ 19 1 1 3.00 3 3 0 0 0 0 0
.........................................................................................TGGTAGATGGACAGGACAAC...................................................................................................... 20 3 9 2.33 21 18 3 0 0 0 0
...................................................................................TCAACTTGGTAGATGGACAGGA.......................................................................................................... 22 3 1 2.00 2 2 0 0 0 0 0
......................................................................................ACTTGCTAGATGGACAGGACA........................................................................................................ 21 1 1 2.00 2 1 1 0 0 0 0
...................................................................................ACCACTTGGTAGATGGACAGGA.......................................................................................................... 22 3 1 2.00 2 2 0 0 0 0 0
.....................................................................................AACTTGGTAGATGGACAGGACA........................................................................................................ 22 3 1 2.00 2 2 0 0 0 0 0
.........................................................................................TGGTAGATGGACAGGACAA....................................................................................................... 19 2 2 1.50 3 3 0 0 0 0 0
.......................................................................................TTTGGTAGATGGACAGGACAA....................................................................................................... 21 3 2 1.50 3 3 0 0 0 0 0
............................................................................................TAGATGGACAGGACAACC..................................................................................................... 18 2 2 1.50 3 3 0 0 0 0 0
.......................................................................................GTTGGTAGATGGACAGGACA........................................................................................................ 20 2 1 1.00 1 1 0 0 0 0 0
.....................................................................................CACTTGGTAGATGGACAGGACA........................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
......................................................................................ACTTGGTAGATGGACAGGA.......................................................................................................... 19 2 1 1.00 1 1 0 0 0 0 0
....................................................................................CCACTTGGTTGATGGACAGGAC......................................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0
....................................................................................CCACTTGGTAGATGGACAGGA.......................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
.....................................................................................CACTTGGTAGATGGACAGGA.......................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................CTTGGTAGATGGACAGGACAT....................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
......................................................................................TCTTGGTAGATGGACAGGACA........................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
...................................................................................TCCACTTGGTAGATGGACAGGAC......................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
....................................................................................ACACTTGGTAGATGGACAGGAC......................................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0
.......................................................................................CTTGGTAGATGGACAGGACAAG...................................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0
......................................................................................TCTTGGTAGATGGACAGGAC......................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................AACTTGGTAGATGGACAGGA.......................................................................................................... 20 3 3 0.67 2 2 0 0 0 0 0
....................................................................................CAACTTGGTAGATGGACAGG........................................................................................................... 20 3 11 0.64 7 7 0 0 0 0 0
.......................................................................................CTTGGTAGGTGGACAGGACAA....................................................................................................... 21 3 2 0.50 1 1 0 0 0 0 0
.........................................................................................TGTTAGATGGACAGGACAACC..................................................................................................... 21 3 2 0.50 1 1 0 0 0 0 0
.......................................................................................CTTGGTAGAAGGACAGGACAA....................................................................................................... 21 3 5 0.40 2 0 0 1 0 1 0
......................................................................................................................TTTGGCGGGATGTGTATAAA......................................................................... 20 3 5 0.40 2 2 0 0 0 0 0
.............................................................................ACCTCGTCCCCTTGCTAGATT................................................................................................................. 21 2 3 0.33 1 0 0 0 1 0 0
....................................................................................................................GTTTGGGTGGGATGTGAA............................................................................. 18 2 3 0.33 1 1 0 0 0 0 0
............................................................................................................ACTGACATGTTTGGCGGG..................................................................................... 18 2 4 0.25 1 1 0 0 0 0 0
..........................................................................................GGTAGATGGACAGGACAAC...................................................................................................... 19 3 20 0.25 5 4 1 0 0 0 0
.......................................................................................................................TTGGCGGGATGTGTATAAA......................................................................... 19 3 18 0.22 4 3 1 0 0 0 0
...........................................................................................GTAGATGGACAGGACAACC..................................................................................................... 19 3 20 0.20 4 3 1 0 0 0 0
..........................................................................................GGTAGATGGACAGGACAA....................................................................................................... 18 2 6 0.17 1 1 0 0 0 0 0
........................................................................................TTGGTAGATGGGCAGGACAA....................................................................................................... 20 3 8 0.13 1 1 0 0 0 0 0
......................................................................................ACTTTGTAGATGGACAGGAC......................................................................................................... 20 3 9 0.11 1 0 0 1 0 0 0
........................................AGGTTAATGACACTCAT.......................................................................................................................................................... 17 1 10 0.10 1 0 0 0 0 0 1
......................................................................................................................TTTGGCGGGATGTGTATAA.......................................................................... 19 3 20 0.10 2 0 2 0 0 0 0
....................................................................................CAACTTGGTAGATGGACAG............................................................................................................ 19 3 20 0.10 2 2 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 3:1889345-1889555 + dps_955 GGAAGTTTTTCAAGTGCGTCAATGAAATGGGAGAATTGCTGCCAATTACTGTGAGTACA-----------------------------------CT--------------------------------AC----A----------------------------------------------CACAC--TCCCAATATGGAGCAGGAGAACGA---------------------------------------T-------------------CTAC----CTGTCC-------------------TGTGTGACTGTACAAACCCACCCTACTCATATTTCCTTCTCC----A--TTTA--TTGCGTGCAGGAGGTGAACGACAAGTGGGACTGCATTGAGCAGAACTACACGTGGATCAA
droPer2 scaffold_2:2072116-2072326 + dpe_1024 GGAAGTTTTTCAAGTGCGTCAATGAAATGGGAGAATTGCTGCCAATTACTGTGAGTACA-----------------------------------CT--------------------------------AC----A----------------------------------------------CACAC--TCCCAATATGGAGCAGGAGAACGA---------------------------------------T-------------------CTAC----CTGTCC-------------------TGTGTGACTGTACAAACCCACCCTACTCATATTTCCTTCTCC----A--TTTA--TTGCGTGCAGGAGGTGAACGACAAGTGGGACTGCATTGAGCAGAACTACACGTGGATCAA
droWil2 scf2_1100000004510:1829992-1830208 + GTAAATTTTTCAAATGCGTCAATGAAATCGGCGAATTGCTGCCAATTACCGTGAGTAACGAACCCAAAACAAACCTAAATTTAAACTAAATTCATATTGAAAAAGAAAATTTTTCAAAATTAATTTTAA---------ATGA-------------------------------------------------------------------CAA---------------------------------------A-------------------CAAA----TTATAA-------------------TTTGTA------------------------------------A-------TAA--TTTTATGTAGGAGGTGAACGATAAATGGGATTGCATTGAACAAAACTATACATGGATCAA
droVir3 scaffold_12823:2398184-2398382 + dvi_3172 GTAAATTTTTCAAATGCGTCAATGAATTGGGCGAATTGCTGCCAATTACTGTAAGTATG-----------------------------------CC--------------------------------GA----A----------------------------------------------CAGACCGCCCCA------AGCAGGCGAA------------------------------------------------TC--------CCAATTAC----CCAACCACATTGCCCAAGCTCCAAT-----TAAT-AT-----------------------GTTTTCC----A--TTTGCA--ACTTACAGGAGGTCAACGATAAGTGGGACTGCATCGAGCAGAACTACACGTGGATCAA
droMoj3 scaffold_6496:1757986-1758190 + GTAAATTTTTCAAATGCGTCAATGAGTTGGGCGAATTGCTGCCGATTACTGTAAGTATG-----------------------------------CC--------------------------------AA----AACCCAGATCAGGATCTGTAATTATAT---CTTCCTCTGCATATACAT---------------------------------------------------A----GATCGGAA--------------------------------------------------GTTTGATA-----TAAT-AT-----------------------ATTTTCCTTT------GGCTCTCCTTGTAGGAGGTCAACGATAAATGGGATTGCATTGAGCAAAACTATACGTGGATCAA
droGri2 scaffold_15245:15676066-15676270 - GTAAATTTTTCAAATGCATCAATGAATTGGGCGAGTTGCTGCCAATTACTGTAAGTATG-----------------------------------CC--------------------------------AA----G----------------------------------------------AAAAC--CATAAAAAAAAAGAAAGAAAAATAGCATCTCTATTAGA------AA----CCTC---------T-------------------CA-----------------------ATTTGACTTGAATTAATATAC---------------------G---------TTTTGTTAATT----TTACAGGAAGTAAACGATAAATGGGATTGCATTGAGCAGAACTACACGTGGATCAA
droAna3 scaffold_13266:12088206-12088398 + GTAAATTTTTCAAGTGCGTCAATGAGTTGGGCGAGTTGCTGCCCATCACTGTAAGTAGT-----------------------------------CCCTGGACACGGGATCC-----------TTCCTTCC---------------------------------------------------------------------------------------------------------------------AGGATCCGACACCCGCCCGCC---CA-----------------------GCTCCACC-----TGAC-CACTA---------------------------ATCCCTG--AATA--CTTCGCAGGAGGTGAACGACAAGTGGGACTGCATCGAGCAGAACTACACCTGGATCAA
droBip1 scf7180000396547:391019-391207 - GTAAATTTTTCAAGTGCGTCAATGAGTTGGGCGAGTTGCTGCCCATCACCGTAAGTAGT-----------------------------------CCCTGGACCCAGGATCC-----------TTCCTGC---------CCGAT------------------------------------------------------------------------------------------------------------------AACCGCCCCCC---CA---------------------CGGCTCCACT-----TGAC-CACTA---------------------------ATCCCCG--ACTA--CTTCGCAGGAGGTGAACGACAAGTGGGACTGCATCGAACAGAACTACACCTGGATCAA
droKik1 scf7180000302366:938636-938809 + GTAAATTTTTCAAGTGCGTCAACGAGCTGGGCGAGTTGCTGCCAATTACTGTGAGTATT-----------------------------------CT--------------------------------GG----A----------------------------------------------------------------------------------------------------------------AGGATTGGATTC--------TTGGTTACTTTCCTG--------------------CCTTTACTTA--TACCT-------------------G-------CTTGCTT--GGCT----TGGCAGGAGGTGAACGACAAGTGGGACTGCATCGAGCAGAACTACACGTGGATCAA
droFic1 scf7180000453858:698074-698256 - GTAAATTTTTCAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTGAGTATC-----------------------------------TT-------------------------------TGGCGGAGATGCAGCTCCAGTTG--------CAG-------------------------------------------------------CTCCATTACC------GG----TCCCCCGGAAGA----------------------------------------------------------------AACTA---------------------------ATCCCTG--CTAA----TTCTAGGAGGTGAACGACAAGTGGGACTGCATCGAGCAGAACTACACGTGGATCAA
droEle1 scf7180000491214:2179659-2179831 + GTAAATTTTTCAAGTGCGTCAATGAGATGGGCGAATTGCTGCCGATAACTGTGAGTAGA-----------------------------------TGT------------------------------CTG---------CGATGTAGCTT--------TCCAAT-------------C--------------------------------------TCC-------------CA----TCATTGAAATCG----------------------------------------------------------------TGCTA---------------------------ATTTATGT-TGAA----TTTCAGGAGGTGAACGACAAGTGGGACTGCATCGAGCAGAACTACACGTGGATCAA
droRho1 scf7180000779661:33644-33821 - GTAAATTTTTCAAGTGCGTCAATGAGATGGGCGAGTTACTGCCGATAACTGTGAGTACT-----------------------------------TTT------------------------------CGGCAGAAGTTCAGATGCAGCTC--------CAT----------------C--------------------------------------TCC-------------CA----TCTCTGGGATTA----------------------------------------------------------------TACTA---------------------------ATCTATG--CGAA----TTCCAGGAGGTCAACGACAAATGGGACTGCATCGAGCAGAACTATACGTGGATAAA
droBia1 scf7180000301754:5765495-5765677 + GTAAATTTTTCAAGTGCGTTAATGAGATGGGCGAGTTACTGCCGATTACTGTGAGTATT-----------------------------------CT-T-----------------------------GGGCGGAGATTCAGATGCAGCTC--------CAC-------------------------------------------------------C---------CCGA--AAGGTGCACTTGGCATAT----------------------------------------------------------------TACTA---------------------------ACCAATG--CGTA----TTCCAGGAGGTGAACGACAAGTGGGACTGCATCGAACAGAACTACACATGGATCAA
droTak1 scf7180000415805:424052-424232 - GTAAATTTTTCAAGTGCGTTAATGAGATGGGCGAGTTGCTGCCGATTACTGTGAGTATT-----------------------------------TTT---------------------------CCTTGGGGGAGAGTCAGATGAAGCTC--------CAC----------------CCAAC---------------------------------------------------A----GACCGAGCATTT----------------------------------------------------------------AACTA---------------------------ATCTATT--CGAA----TTCCAGGAGGTGAACGACAAGTGGGACTGCATCGAACAGAACTACACATGGATAAA
droEug1 scf7180000409464:1161709-1161884 + GTAAATTTTTCAAATGCGTCAATGAGATGGGCGAGTTGCTGCCGATTACTGTAAGTACT-----------------------------------TT-------------------------------AGGAGGAGATGCGGATGCAGCTT--------CTC-------------------------------------------------------TTC-------------CA----CTCCTGGAACTT----------------------------------------------------------------TACCA---------------------------ATCTGTA--TGTA----TTGCAGGAGGTGAACGACAAGTGGGACTGCATCGAGCAGAACTACACATGGATCAA
dm3 chr2R:20799647-20799825 + GTAAATTTTTTAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTAAGTATT-----------------------------------CT--------------------------------GGTGGATGTTCAGATGCAGCTT--------CAC-------------------------------------------------------A---------TCAATCAA----CACCTGAGATAT----------------------------------------------------------------TATTA---------------------------ATCATTT--CATA----TTCCAGGAGGTTAACGACAAGTGGGACTGCATCGAACAGAACTACACGTGGATTAA
droSim2 2r:21262390-21262568 + GTAAATTTTTTAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTAAGTATT-----------------------------------CT--------------------------------GGTGGATGTTCAGATGCAGCTT--------CAT-------------------------------------------------------A---------CCAATTAA----CACCTGAGATAT----------------------------------------------------------------TATTA---------------------------ATTATTT--CATA----TTCCAGGAGGTTAACGACAAGTGGGACTGCATCGAACAGAACTACACGTGGATTAA
droSec2 scaffold_23:656655-656833 + GTAAATTTTTTAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTAAGTATT-----------------------------------CT--------------------------------GGTGGATGTTCAGATGCAGCTT--------CAT-------------------------------------------------------A---------CCAATTAA----CACCTGAGATAT----------------------------------------------------------------TATTA---------------------------ATCATTT--CATA----TTCCAGGAGGTTAACGACAAGTGGGACTGCATCGAACAGAACTACACGTGGATTAA
droYak3 2R:20763089-20763267 + GTAAATTTTTTAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTAAGTATT-----------------------------------CC--------------------------------GGTGAATGTTCAGATGCAGCCA--------CGC-------------------------------------------------------A---------CCAATCAA----CATTTGGGATAT----------------------------------------------------------------TAATA---------------------------ATCATTG--CATA----TTCCAGGAGGTGAACGACAAGTGGGACTGCATCGAACAGAACTACACGTGGATTAA
droEre2 scaffold_4845:22169713-22169891 + GTAAATTTTTTAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTAAGTATT-----------------------------------CT--------------------------------GGTGGATGCTCAGATGCAGTTG--------CAC-------------------------------------------------------A---------CCAATCAA----CACCGGGGATAT----------------------------------------------------------------TATTA---------------------------ATCATTG--CATA----TTCCAGGAGGTAAACGACAAGTGGGACTGCATCGAACAGAACTACACGTGGATCAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GGAAGTTTTTCAAGTGCGTCAATGAAATGGGAGAATTGCTGCCAATTACTGTGAGTACA-----------------------------------CT--------------------------------AC----A----------------------------------------------CACAC--TCCCAATATGGAGCAGGAGAACGA---------------------------------------T-------------------CTAC----CTGTCC-------------------TGTGTGACTGTACAAACCCACCCTACTCATATTTCCTTCTCC----A--TTTA--TTGCGTGCAGGAGGTGAACGACAAGTGGGACTGCATTGAGCAGAACTACACGTGGATCAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................TTA--TTGCGTGCAGGAGGT.............................................1811.0010100000000
droPer2
GGAAGTTTTTCAAGTGCGTCAATGAAATGGGAGAATTGCTGCCAATTACTGTGAGTACA-----------------------------------CT--------------------------------AC----A----------------------------------------------CACAC--TCCCAATATGGAGCAGGAGAACGA---------------------------------------T-------------------CTAC----CTGTCC-------------------TGTGTGACTGTACAAACCCACCCTACTCATATTTCCTTCTCC----A--TTTA--TTGCGTGCAGGAGGTGAACGACAAGTGGGACTGCATTGAGCAGAACTACACGTGGATCAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................................................................TCTCC----A--TTTA--TTGCGTGCA...................................................1911.001001000
droWil2
GTAAATTTTTCAAATGCGTCAATGAAATCGGCGAATTGCTGCCAATTACCGTGAGTAACGAACCCAAAACAAACCTAAATTTAAACTAAATTCATATTGAAAAAGAAAATTTTTCAAAATTAATTTTAA---------ATGA-------------------------------------------------------------------CAA---------------------------------------A-------------------CAAA----TTATAA-------------------TTTGTA------------------------------------A-------TAA--TTTTATGTAGGAGGTGAACGATAAATGGGATTGCATTGAACAAAACTATACATGGATCAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................TATAA-------------------TTTGTA------------------------------------A-------TAA--TTTTATG.....................................................2212.00220000
droVir3
GTAAATTTTTCAAATGCGTCAATGAATTGGGCGAATTGCTGCCAATTACTGTAAGTATG-----------------------------------CC--------------------------------GA----A----------------------------------------------CAGACCGCCCCA------AGCAGGCGAA------------------------------------------------TC--------CCAATTAC----CCAACCACATTGCCCAAGCTCCAAT-----TAAT-AT-----------------------GTTTTCC----A--TTTGCA--ACTTACAGGAGGTCAACGATAAGTGGGACTGCATCGAGCAGAACTACACGTGGATCAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................GGGACTGCATCGAGCAGAACTACACGT.......2711.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TGGGACTGCATCGAGCAGAACTACACGT.......2811.001000000000000000000000000001000000000000000000000000000000000000
...........................TGGGCGAATTGCTGCCAATTACTGAGG.............................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000010000000000000000000000000000000000000
.TAAATTTTTCAAATGCGTCAATGAAT........................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................GATAAGTGGGACTGCATCGAGCAGA................2511.001000000000000000000000000000000000000000000000000000000000001000
......................TGAATTGGGCGAATTGCTGCCAAT.....................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TAAGTGGGACTGCATCGAGCAGA................2311.001000000000010000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................GACTGCATCGAGCAGAACTACACGTGGAT...2911.001000000000000000000000000010000000000000000000000000000000000000
droMoj3
GTAAATTTTTCAAATGCGTCAATGAGTTGGGCGAATTGCTGCCGATTACTGTAAGTATG-----------------------------------CC--------------------------------AA----AACCCAGATCAGGATCTGTAATTATAT---CTTCCTCTGCATATACAT---------------------------------------------------A----GATCGGAA--------------------------------------------------GTTTGATA-----TAAT-AT-----------------------ATTTTCCTTT------GGCTCTCCTTGTAGGAGGTCAACGATAAATGGGATTGCATTGAGCAAAACTATACGTGGATCAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GTAAATTTTTCAAATGCATCAATGAATTGGGCGAGTTGCTGCCAATTACTGTAAGTATG-----------------------------------CC--------------------------------AA----G----------------------------------------------AAAAC--CATAAAAAAAAAGAAAGAAAAATAGCATCTCTATTAGA------AA----CCTC---------T-------------------CA-----------------------ATTTGACTTGAATTAATATAC---------------------G---------TTTTGTTAATT----TTACAGGAAGTAAACGATAAATGGGATTGCATTGAGCAGAACTACACGTGGATCAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
GTAAATTTTTCAAGTGCGTCAATGAGTTGGGCGAGTTGCTGCCCATCACTGTAAGTAGT-----------------------------------CCCTGGACACGGGATCC-----------TTCCTTCC---------------------------------------------------------------------------------------------------------------------AGGATCCGACACCCGCCCGCC---CA-----------------------GCTCCACC-----TGAC-CACTA---------------------------ATCCCTG--AATA--CTTCGCAGGAGGTGAACGACAAGTGGGACTGCATCGAGCAGAACTACACCTGGATCAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
GTAAATTTTTCAAGTGCGTCAATGAGTTGGGCGAGTTGCTGCCCATCACCGTAAGTAGT-----------------------------------CCCTGGACCCAGGATCC-----------TTCCTGC---------CCGAT------------------------------------------------------------------------------------------------------------------AACCGCCCCCC---CA---------------------CGGCTCCACT-----TGAC-CACTA---------------------------ATCCCCG--ACTA--CTTCGCAGGAGGTGAACGACAAGTGGGACTGCATCGAACAGAACTACACCTGGATCAASizeHit CountTotal NormTotal
No Reads
droKik1
GTAAATTTTTCAAGTGCGTCAACGAGCTGGGCGAGTTGCTGCCAATTACTGTGAGTATT-----------------------------------CT--------------------------------GG----A----------------------------------------------------------------------------------------------------------------AGGATTGGATTC--------TTGGTTACTTTCCTG--------------------CCTTTACTTA--TACCT-------------------G-------CTTGCTT--GGCT----TGGCAGGAGGTGAACGACAAGTGGGACTGCATCGAGCAGAACTACACGTGGATCAASizeHit CountTotal NormTotal
No Reads
droFic1
GTAAATTTTTCAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTGAGTATC-----------------------------------TT-------------------------------TGGCGGAGATGCAGCTCCAGTTG--------CAG-------------------------------------------------------CTCCATTACC------GG----TCCCCCGGAAGA----------------------------------------------------------------AACTA---------------------------ATCCCTG--CTAA----TTCTAGGAGGTGAACGACAAGTGGGACTGCATCGAGCAGAACTACACGTGGATCAASizeHit CountTotal NormTotal
No Reads
droEle1
GTAAATTTTTCAAGTGCGTCAATGAGATGGGCGAATTGCTGCCGATAACTGTGAGTAGA-----------------------------------TGT------------------------------CTG---------CGATGTAGCTT--------TCCAAT-------------C--------------------------------------TCC-------------CA----TCATTGAAATCG----------------------------------------------------------------TGCTA---------------------------ATTTATGT-TGAA----TTTCAGGAGGTGAACGACAAGTGGGACTGCATCGAGCAGAACTACACGTGGATCAASizeHit CountTotal NormTotal
No Reads
droRho1
GTAAATTTTTCAAGTGCGTCAATGAGATGGGCGAGTTACTGCCGATAACTGTGAGTACT-----------------------------------TTT------------------------------CGGCAGAAGTTCAGATGCAGCTC--------CAT----------------C--------------------------------------TCC-------------CA----TCTCTGGGATTA----------------------------------------------------------------TACTA---------------------------ATCTATG--CGAA----TTCCAGGAGGTCAACGACAAATGGGACTGCATCGAGCAGAACTATACGTGGATAAASizeHit CountTotal NormTotal
No Reads
droBia1
GTAAATTTTTCAAGTGCGTTAATGAGATGGGCGAGTTACTGCCGATTACTGTGAGTATT-----------------------------------CT-T-----------------------------GGGCGGAGATTCAGATGCAGCTC--------CAC-------------------------------------------------------C---------CCGA--AAGGTGCACTTGGCATAT----------------------------------------------------------------TACTA---------------------------ACCAATG--CGTA----TTCCAGGAGGTGAACGACAAGTGGGACTGCATCGAACAGAACTACACATGGATCAASizeHit CountTotal NormTotal
No Reads
droTak1
GTAAATTTTTCAAGTGCGTTAATGAGATGGGCGAGTTGCTGCCGATTACTGTGAGTATT-----------------------------------TTT---------------------------CCTTGGGGGAGAGTCAGATGAAGCTC--------CAC----------------CCAAC---------------------------------------------------A----GACCGAGCATTT----------------------------------------------------------------AACTA---------------------------ATCTATT--CGAA----TTCCAGGAGGTGAACGACAAGTGGGACTGCATCGAACAGAACTACACATGGATAAASizeHit CountTotal NormTotal
No Reads
droEug1
GTAAATTTTTCAAATGCGTCAATGAGATGGGCGAGTTGCTGCCGATTACTGTAAGTACT-----------------------------------TT-------------------------------AGGAGGAGATGCGGATGCAGCTT--------CTC-------------------------------------------------------TTC-------------CA----CTCCTGGAACTT----------------------------------------------------------------TACCA---------------------------ATCTGTA--TGTA----TTGCAGGAGGTGAACGACAAGTGGGACTGCATCGAGCAGAACTACACATGGATCAASizeHit CountTotal NormTotal
No Reads
dm3
GTAAATTTTTTAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTAAGTATT-----------------------------------CT--------------------------------GGTGGATGTTCAGATGCAGCTT--------CAC-------------------------------------------------------A---------TCAATCAA----CACCTGAGATAT----------------------------------------------------------------TATTA---------------------------ATCATTT--CATA----TTCCAGGAGGTTAACGACAAGTGGGACTGCATCGAACAGAACTACACGTGGATTAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................TAATGAGATGGGCGAGCTACTGCCGAT.....................................................................................................................................................................................................................................................................................................................................................................................27131.003100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000200000000000001100000001012100000
..........TAAGTGCGTTAATGAGATGGGCGAGC...............................................................................................................................................................................................................................................................................................................................................................................................26128.00280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000000000000000000000000000000000000000000000000000000000000000021070000020000000000000000132800000
......TTTTTAAGTGCGTTAATGAGATGGGC...................................................................................................................................................................................................................................................................................................................................................................................................26116.001600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001011000000
.........TTAAGTGCGTTAATGAGATGGGCGAGC...............................................................................................................................................................................................................................................................................................................................................................................................27113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000100020000000000000000000000001600000
.........................................................................................................................................................................................................................................................................................................................................................................................................ATCGAACAGAACTACACGTGGAT...23113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AATGAGATGGGCGAGCTACTGCCGAT.....................................................................................................................................................................................................................................................................................................................................................................................26111.00110000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000010000010500000
.....TTTTTTAAGTGCGTTAATGAGATGGGC...................................................................................................................................................................................................................................................................................................................................................................................................27111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000011700000
..................TTAATGAGATGGGCGAGCTACTGCCGAT.....................................................................................................................................................................................................................................................................................................................................................................................28110.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......TTTTAAGTGCGTTAATGAGATGGGC...................................................................................................................................................................................................................................................................................................................................................................................................2519.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000900000
...................TAATGAGATGGGCGAGCTACTGCCGA......................................................................................................................................................................................................................................................................................................................................................................................2618.0080000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000001000000000000010000000000100200000
......................TGAGATGGGCGAGCTACTGCCGAT.....................................................................................................................................................................................................................................................................................................................................................................................2418.0080000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001500000
.....................................................................................................................................................................................................................................................................................................................................................................................TTAACGACAAGTGGGACTGC..........................2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATGAGATGGGCGAGCTACTGCCGAT.....................................................................................................................................................................................................................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010500000
......................................................................................................................................................................................................................................................................................................................................................................................................TGCATCGAACAGAACTACACGTGGAT...2615.0050000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000020000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TTTTTTAAGTGCGTTAATGAGATGGG....................................................................................................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001200000
..............TGCGTTAATGAGATGGGCGAGCTAC............................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................CGAACAGAACTACACGTGGAT...2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AACGACAAGTGGGACTGCATCGAACAGAA...............2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TAATGAGATGGGCGAGCTACTGCCG.......................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................AGTGGGACTGCATCGAACA..................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000
.TAAATTTTTTAAGTGCGTTAATGAGA........................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TAACGACAAGTGGGACTGCATCGAA....................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................ATGGGCGAGCTACTGCCGATTACTGA...............................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......TTTTTAAGTGCGTTAATGAGATGGG....................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000
......................................................................................................................................................................................................................................................................................................................................................................................TAACGACAAGTGGGACTGCATCGAACAGA................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTTAAGTGCGTTAATGAGATGGGCGAGC...............................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................ATCGAACAGAACTACACGT.......1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................GGTTAACGACAAGTGGGACTG...........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TATTA---------------------------ATCATTT--CATA----TTCCAG..................................................2212.0020000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TGTAAGTATT-----------------------------------CT--------------------------------GGTGGAT............................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................T----------------------------------------------------------------TATTA---------------------------ATCATTT--CATA----TTCCAG..................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................TAATGAGATGGGCGAGCTACTG..........................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
..................TTAATGAGATGGGCGAGCTACTG..........................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................CAAGTGGGACTGCATCGAACAGAACTA............2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................ATCGAACAGAACTACACGTGG.....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TTAATGAGATGGGCGAGCTACTGCCGA......................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........TAAGTGCGTTAATGAGATGGGCGAG................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........AAGTGCGTTAATGAGATGG.....................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTTAAGTGCGTTAATGAGATG......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TGCGTTAATGAGATGGGCGAGCTACTGC.........................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................AGTGGGACTGCATCGAACAGAACTACA..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAAGTATT-----------------------------------CT--------------------------------GGTGGAT............................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................GACTGCATCGAACAGAACTACACGTGGAT...2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TTACTGTAAGTATT-----------------------------------CT--------------------------------GGTGG..............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TTAATGAGATGGGCGAGCTACTGCCGAG.....................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AATGAGATGGGCGAGCTACTGCCGA......................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
........TTTAAGTGCGTTAATGAGATGG.....................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATGGGCGAGCTACTGCCGATTACTGAG..............................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................GTAAGTATT-----------------------------------CT--------------------------------GGTGGATGTT.........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................GCTACTGCCGATTACTGA...............................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTTAAGTGCGTTAATGAGATGGGCG..................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............AGTGCGTTAATGAGATGGGCGAGCTACT...........................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AGTGGGACTGCATCGAACAGAACTA............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................CTACTGCCGATTACTGTAAGT...........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGCATCGAACAGAACTACACGT.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................CAAGTGGGACTGCATCGAACAGAAC..............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTTAAGTGCGTTAATGAGATGGGC...................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.TAAATTTTTTAAGTGCGTTAATGAG.........................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GTATT-----------------------------------CT--------------------------------GGTGGATGTTCAGA.....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GCGTTAATGAGATGGGCGAGC...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................TTAACGACAAGTGGGACTGCATCGAACAGA................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTAAGTGCGTTAATGAGATGGG....................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............TGCGTTAATGAGATGGGCGAG................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................CAAGTGGGACTGCATCGAA....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......TTTTAAGTGCGTTAATGAGAT.......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................GGTTAACGACAAGTGGGACTGCATC.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................ACTGCATCGAACAGAACTACACGTGGA....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................GTGGATGTTCAGATGCAGCTT--------.....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TTAACGACAAGTGGGACTGCA.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TTAATGAGATGGGCGAGCTACTGC.........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................TTAACGACAAGTGGGACTG...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTAAGTGCGTTAATGAGATGGGCGA.................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................ACTGCATCGAACAGAACTACACGTGGAT...2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................T--------------------------------GGTGGATGTTCAGATGCAGC...............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................GACTGCATCGAACAGAACTACACGT.......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TCGAACAGAACTACACGTGGAT...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TTTTAAGTGCGTTAATGAGATGGGCGA.................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................AACAGAACTACACGTGGATT..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AAGTGCGTTAATGAGATGGGC...................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................ATT-----------------------------------CT--------------------------------GGTGGATGTTCGC......................................................................................................................................................................................................................................................................................18120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
droSim2
GTAAATTTTTTAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTAAGTATT-----------------------------------CT--------------------------------GGTGGATGTTCAGATGCAGCTT--------CAT-------------------------------------------------------A---------CCAATTAA----CACCTGAGATAT----------------------------------------------------------------TATTA---------------------------ATTATTT--CATA----TTCCAGGAGGTTAACGACAAGTGGGACTGCATCGAACAGAACTACACGTGGATTAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................TTAACGACAAGTGGGACTGCATCGAAC...................2713.00300000010000011000
.....................................................................................................................................................................................................................................................................................................................................................................................................CTGCATCGAACAGAACTACACGTGGAA...2712.00200000000000002000
.....................................................................................................................................................................................................................................................................................................................................................................................TTAACGACAAGTGGGACTGCATCGAA....................2611.00100000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................GGTTAACGACAAGTGGGACTGCATC.......................2511.00100000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................TAACGACAAGTGGGACTGCATCGA.....................2411.00100000000000001000
........TTTAAGTGCGTTAATGAGATGGGCGAGC...............................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
........TTTAAGTGCGTTAATGAGATGGGCGA.................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
..................TTAATGAGATGGGCGAGCT..............................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
.........TTAAGTGCGTTAATGAGATGGGC...................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGCATCGAACAGAACTACACGTGGAA...2611.00100000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................CAAGTGGGACTGCATCGAACAGAAC..............2511.00100000001000000000
droSec2
GTAAATTTTTTAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTAAGTATT-----------------------------------CT--------------------------------GGTGGATGTTCAGATGCAGCTT--------CAT-------------------------------------------------------A---------CCAATTAA----CACCTGAGATAT----------------------------------------------------------------TATTA---------------------------ATCATTT--CATA----TTCCAGGAGGTTAACGACAAGTGGGACTGCATCGAACAGAACTACACGTGGATTAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................GTAAGTATT-----------------------------------CT--------------------------------GGTGGATGTTCAGATG...................................................................................................................................................................................................................................................................................2711.0010001
........................................................................................................................................................................................................................................................................................................................................................................................ACGACAAGTGGGACTGCATCGAAC...................2411.0010100
droYak3
GTAAATTTTTTAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTAAGTATT-----------------------------------CC--------------------------------GGTGAATGTTCAGATGCAGCCA--------CGC-------------------------------------------------------A---------CCAATCAA----CATTTGGGATAT----------------------------------------------------------------TAATA---------------------------ATCATTG--CATA----TTCCAGGAGGTGAACGACAAGTGGGACTGCATCGAACAGAACTACACGTGGATTAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................ATA---------------------------ATCATTG--CATA----TTCCAGAT................................................2211.00100100000000
..........................................................................................................................................................................................................................................................................................................................TAATA---------------------------ATCATTG--CATA----TTCCAGT.................................................2311.00100000100000
droEre2
GTAAATTTTTTAAGTGCGTTAATGAGATGGGCGAGCTACTGCCGATTACTGTAAGTATT-----------------------------------CT--------------------------------GGTGGATGCTCAGATGCAGTTG--------CAC-------------------------------------------------------A---------CCAATCAA----CACCGGGGATAT----------------------------------------------------------------TATTA---------------------------ATCATTG--CATA----TTCCAGGAGGTAAACGACAAGTGGGACTGCATCGAACAGAACTACACGTGGATCAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................TTAATGAGATGGGCGAGCTACTGCCGA......................................................................................................................................................................................................................................................................................................................................................................................2714.0040000004
............................................................................................................................................................................................................................................................................................................................TTA---------------------------ATCATTG--CATA----TTCCAG..................................................2011.0010000010
..........................................................................................................................................................................................................................................................................................................................TATTA---------------------------ATCATTG--CATA----TTCCAG..................................................2211.0010000010

Generated: 05/17/2015 at 11:41 PM