ID:

dps_950

 Coordinate:

3:1767986-1768136 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.7 -18.2 -18.1

Flybase annnotation

exon [dpse_GLEANR_15135:1]; CDS [Dpse\GA24634-cds]; intron [Dpse\GA24634-in]

Repeatable elements

NameClassFamilyStrand
Galileo_DMDNAP-
mature
star
  1. dps_950  3:1768102-1768122 +
  2. 3:9611502-9611522 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ACAACTTAAACAAGTGACCACAATAGTGGCTGACACCGGCGACTTTGAAGGTACATATATAAGGTTCATATATAAGTTGTGTTTTGTTAAAAAGAAGTTAATTTAAAGCTAAGTTTGATCTGGAATATACACACACACACACATACAAAAGCTGAAACATGCTTTCTAAGGTAAATGTATGTATGTATGTATGCTGTACAGGTTCAATGATAATCATAAATATGTATGTACGTACGTACGTACATAAAAAA
********************************************************************.......(((((((..((((....(((....((((((....))))))...)))..)))).))))).))(((.((((((((((((........)))))..........))))))).))).**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 GSM444067
head
 V112
male body		 M022
male body		 M062
head
 GSM343916
embryo
........................AGTGGCTGACACCGGCGA................................................................................................................................................................................................................. 18 0 1 2.00 2 2 0 0 0 0 0 0
......TAAACAAGTGACCACAATAGT................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0
......TAAACAAGTGACCACAATAGTGGC............................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................TATATAAGTTGTGTTTTGTT................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................................................................................TAAGGTAAATGTATGTATGTA................................................................ 21 0 2 1.00 2 1 0 0 1 0 0 0
...............GACCACAATAGTGGCTGACACCGGCGA................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0
.................................CACCGGCGACTTTGAAGC........................................................................................................................................................................................................ 18 1 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................CTGAAACATGCTTTCTAAGG................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0
..........................TGGCTGACACCGGCGACTTTG............................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................ATATAAGTTGTGTTTTGTTA.................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0
...........................GGCTGACACCGGCGACTTTGAAGC........................................................................................................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0 0
..................CACAATAGTGGCTGACACCGGCGACTTT............................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................CAATGATAGTCATAAATATGT.......................... 21 1 1 1.00 1 0 0 1 0 0 0 0
...............GACCACAATAGTGGCTGACACCGGC................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
........................GGTGGCTGACACCGGCGACT............................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
..............................TGACACCGGCGACTTGGAAGCC....................................................................................................................................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0
........................TGTGGCTGACACCGGCGACTT.............................................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0
.................................CACCGGCGACTTTGAAGGTAC..................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................TTTGATCTGGAATATACACAC..................................................................................................................... 21 0 2 0.50 1 0 0 0 0 1 0 0
.......................................................................................................................................................................AAGGTAAATGTATGTATGTA................................................................ 20 0 2 0.50 1 0 0 1 0 0 0 0
......................................................................................................TTAAAGCTAAGTTTGATCTGG................................................................................................................................ 21 0 2 0.50 1 1 0 0 0 0 0 0
........................................................................................................AAAGCTAAGTTTGATCTGGAA.............................................................................................................................. 21 0 2 0.50 1 0 0 0 1 0 0 0
.....................................................................................................................................................................................................GCATGTTCAATGATAGTCATA................................. 21 3 2 0.50 1 1 0 0 0 0 0 0
...............................................................................................................AGTTTGATCTGGAATATACAC....................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0
........................................................................................................AAAGCTAAGTTTGATCTGC................................................................................................................................ 19 1 2 0.50 1 1 0 0 0 0 0 0
........................................................................................................AATGCTAAGTTTGATCTGC................................................................................................................................ 19 2 2 0.50 1 0 1 0 0 0 0 0
.........................................................................................................AAGCTAAGTTTGATCTGGAAT............................................................................................................................. 21 0 2 0.50 1 0 0 0 1 0 0 0
......................................................................................................TTAAAGCTGGGTTTGATCTG................................................................................................................................. 20 2 3 0.33 1 1 0 0 0 0 0 0
.............................................................................TGTGTGATGTTAAAAAGAA........................................................................................................................................................... 19 2 3 0.33 1 1 0 0 0 0 0 0
..................................................................................TTTGTTAAAGAGATGTTAA...................................................................................................................................................... 19 2 4 0.25 1 0 0 0 0 0 0 1
..................................................................................................................TTGATCTGCAATATACACGCC.................................................................................................................... 21 3 5 0.20 1 1 0 0 0 0 0 0
...........................................................................................................GGTAAGTTTGATCTGGAT.............................................................................................................................. 18 2 5 0.20 1 1 0 0 0 0 0 0
.........................ATGGCTGACACCGGCGTC................................................................................................................................................................................................................ 18 2 6 0.17 1 0 0 0 0 0 1 0
..............................................................................................................GGGTTTGATCTGGAATGTACA........................................................................................................................ 21 3 6 0.17 1 1 0 0 0 0 0 0
..............................................................................................................................................................................AGGTATGTATGTATGTATGCT........................................................ 21 1 8 0.13 1 0 0 0 0 0 1 0
............................................................................................................................................................................................................................TATGTATGTACGTACGTA............. 18 0 9 0.11 1 1 0 0 0 0 0 0

Anti-sense strand reads

TGTTGAATTTGTTCACTGGTGTTATCACCGACTGTGGCCGCTGAAACTTCCATGTATATATTCCAAGTATATATTCAACACAAAACAATTTTTCTTCAATTAAATTTCGATTCAAACTAGACCTTATATGTGTGTGTGTGTGTATGTTTTCGACTTTGTACGAAAGATTCCATTTACATACATACATACATACGACATGTCCAAGTTACTATTAGTATTTATACATACATGCATGCATGCATGTATTTTTT
****************************************************************.......(((((((..((((....(((....((((((....))))))...)))..)))).))))).))(((.((((((((((((........)))))..........))))))).))).******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 M062
head
 GSM444067
head
 GSM343916
embryo
TGTTGAATTTGTTCACTGGTG...................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................TGTGTATGTTTTCGACTTTGT............................................................................................ 21 0 1 1.00 1 1 0 0 0 0
...........................CCGACTGTGGCCGCTGAGACT........................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.................................GTGGCCGCTGAAACTTCCAT...................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................ACGACATGTCCAAGTTACTA........................................ 20 0 1 1.00 1 1 0 0 0 0
...............................................TTCCATGTATATATTCCAAGT....................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................GTGTGTGTGTATGTTTTCG................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
.........................CACCGACTGTGGCCGCTGAAA............................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................GTGTGTGTATGTTTTCGACTTTG............................................................................................. 23 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................CTTTGTACGAAAGATTCCATT............................................................................. 21 0 1 1.00 1 1 0 0 0 0
........................TCACCGACTGTGGACGCGGAA.............................................................................................................................................................................................................. 21 2 1 1.00 1 0 0 1 0 0
..................................TGGCCGCTGAAACTTCCATGT.................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..........................ACCGACTGTGGCCGCTGGG.............................................................................................................................................................................................................. 19 2 2 0.50 1 0 0 0 1 0
.............................................................................................................................................................GTACGGAAGATTCCATTTACA......................................................................... 21 1 2 0.50 1 0 0 0 1 0
..........................................................................................................TCGATTCAAACTAGACGTTAT............................................................................................................................ 21 1 2 0.50 1 0 1 0 0 0
....................................................................................................................CTAGACGTTATATGTGTGGGT.................................................................................................................. 21 2 2 0.50 1 1 0 0 0 0
........................................................................................................ATTCGATTCAAACTAGACCTT.............................................................................................................................. 21 1 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................GTACGAAAGATTCCATTTACA......................................................................... 21 0 2 0.50 1 1 0 0 0 0
....................................................................................................................CTAGACCTTATATGTGTGTGT.................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0
........................................................................................................TTTCGATTCAAACTAGACCTT.............................................................................................................................. 21 0 2 0.50 1 0 1 0 0 0
................................TGTGGCCGCTGAACCCTC......................................................................................................................................................................................................... 18 2 3 0.33 1 1 0 0 0 0
........................................................................................................................ACGTTATATGTGTGGGTGTATGTAT.......................................................................................................... 25 3 6 0.17 1 0 0 0 0 1
...........................................................................................................................TTATATGTGTGTGTGTGT.............................................................................................................. 18 0 19 0.05 1 1 0 0 0 0
.................................................................................................................................GTGTGTGTGTGTGTATGTTT...................................................................................................... 20 0 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 3:1767936-1768186 + dps_950 ACAACTTAAACAAGTGACCACAATAGTGGCTGACACCGGCGACTTTGAAGGTACATATATAAGG-----------TTC-------ATATAT----------AAGTTGTGTTTTGTTAAAA-----------------------------A-G---A-----------------------------------------------------------------------AGTTAATTTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------GC-TAAGTT-----TGATCTGGAATATACACACACACACACATACAAAAGCTGAAACATGCTTTCTAAGGTAAATGTATGTATGTATGTATGCTGTACAGGTTCAATGATA---------------ATC---------AT-------AAAT-----A---------------------------------------TGTA---------------------------------TGTACGT----------ACGTA--CGTAC-ATAAAA---------------------------------------------AA
droPer2 scaffold_2:1958169-1958398 + ACAACTTAAACAAGTGACCACAATAGTGGCTGACACCGGCGACTTTGAAGGTACATATATAAGG-----------TTC-------ATATAT----------AAGTTGTGTTTTGTTAAAA-----------------------------A-G---A-----------------------------------------------------------------------AGTTAATTTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------GC-TAAGTT-----TGATCTGGAATATACACACACACACACATACAAAAGCTGAAACATGCTTTCTAAGGTAAATGTATGTATGTATGTATGCTGTTCAGGTTCAATGATA-------------------------------------------------------------------------GTC-ATA------------------------------------------------------------------------------AATATGTATGT-----------------------------------A
droWil2 scf2_1100000004514:1155017-1155221 - ACAGCTAAAAAAAGTTACCACGATTGTAGCAGACACTGGTGATTTTGAAGGTATGTACATATATT-----------GCCACT----TTCGG----------CAG---------------------------------------------A-TTTGTATCCAA------TTT-----------------------------AC------------ATCCATAGATTTCAT---------------------------TCCCATACATCAATATA-----ATAGTGTAAAACAAATATAAAAAAA----------------------------------------------------------------------------------------------------------------------------------------ACATGCAACAGGTTTCACA-------------------------------------------------------------------------------------------------------------------------------TT-TTTTTTTTATC---------------------------------------------------AAAATTATTCAA-ATTAAA---------------------------------------------AA
droVir3 scaffold_12875:11928100-11928358 + dvi_6267 ACAGCTTAAAAATTTAACAACCATTGTTGCTGATACCGGCGATTTTGATGGTAAATTTGTTCAATAATT-------ATCACT----CATACAATTATGAATTACGTACT--ATTTAAAGC-----------------------------A-TATAAGTATTA------ATT--------------------ATTTTAATATCGTTTTAAGTATC---------AGT-------------------------------------------------------------------------------------------------------------------------------------ATGTTAAGCTATG------------------TTA------ATG-TGGCTA-----TAAGT--------------------------------------------------------------------------------------------GTGG------GTACAT----------------------------A-CATACA------T-ACAAATTAAAAGGTTAGGTT-TGTTGTGGTTTATAAA----------TTAAAACAGCATGTATGTACATATG------------------------------------T-----------------------------------A
droMoj3 scaffold_6496:14932359-14932601 - ACAGCTTAAGAAAATAACTACAATTGTAGCGGATACCGGCGATTTTGATGGTAAATAGAAGGAA-----------GT----------------------------T-------------------------------------------------------------------------------------------------------------------------ATTAAATTGGAAAATTATCCTAGTTTTTAGTACAAGCATTTATGTACATATATAAAGTAAAACAAACAAAAGTCGAACTCATTCACCTCGAGTTTAACTTTTATTTGAACTTCACGCATTCTGCAC--GTTCATTCAATC--------------------------------CTA-TGGTAT-----TACAC--------------------------------------------------------------------------------------------GT------------------------------------------------------------------------------------GTA-------------------------------------------------TACATACATACA---TGTAA---------------------------------------------AT
droGri2 scaffold_15245:11774892-11775169 + ACAACTTAAAAAGATTACCACCATTGTTGCCGATACCGGCGATTTTGATGGTGAGTTTTATTAACA--A------AC--ACT---------------------CG--------------AA---------GTTTTTCTT---------TATTTTTAATCA--------CCTTAAAGTAAATAACATATTGTCTTA-----TCTAC---------ATACATACATGT---------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------TG-CGTAAC-----TAT--------ATACACACACATATATATATAAGTGCATATGCA-----------------------------------------------------------------------------------------------------------------CCTTTTTTAAAGGTTA-AAT-ATTTGTATTACATTAATTGATTTATGCCGGAACAACTACTATATTCATCTA------------------------------------G---------------ATATTCTTTACATCCACCTAA
droAna3 scaffold_13266:5692713-5692962 + GGAACTCAAGCAAGTCACCACAATTGTTGCTGACACCGGCGACTTTGAAGGTAAATATCCGGTT-----------GC--------ATTCAG----------A----------------------------CATTTTGGG---------TGCCCAGAATCAGA-------TTTAAAGTAAA------CTT--TCCA------------------------------------------------------------------------------------------------------------------------------------------AAGCCGGATCG---GTGTCT--CAAAG----AG------ATTGTATGTGTGTGTATGGGTGTACTCTTTCAAAATTTGATCCAAGCCCT---------------------------------------------------GTGAGC--------------------------------CCT-------------------------------------GCG---AGCAT------------AGTCCAAACAATT-TTATCGTTTCC---------------------------------------------------ACATAGATTCAA-TTGAAAGAT--------------------------------------------
droBip1 scf7180000396372:306921-307162 + GGAACTCAAGCAAGTCACCACAATTGTTGCTGACACCGGCGACTTTGAAGGTAAATATCCGGTT-----------ACA-------------------------CGCAAA---------------------CATTTTGGG---------TGCCCAGATTCAGA-------TTTAAAGTAAA------CTT--TCCA------------------------------------------------------------------------------------------------------------------------------------------AAGCCGCATCG---GTGTCT--CAAAA----AG--------TGTATGTGTGTG----TATATACTCTTT-AGAATA-----TGATC--------------------------------------------------------------------------------------------CGAG------GACCATTCCCTTT-----------------GCGTG-CAT--------------AGTCCAAATAATT-TTATCGTTTCC---------------------------------------------------ACATGGATTCAA-TTGAAAGA---------------------------------------------
droKik1 scf7180000302355:409863-410149 + AGAACTTAAGCAAGTCACCACAATTGTGGCTGACACCGGCGACTTTGAAGGTAAACCACCACCACCTGTATACATATT-------A----------------------------TAGCTA-----------------------------G-GCTGAGTCCGA------TTTCCAAGTGAACGTAAGTC-GCTTCA------------------------------------------------------------------------------------------------------------------------------------------AAGCCGCGAGT---GAATCT--CAAAGTACAAGCGTGTG------------------TATCTCCGTAAG-TCCCCG-----TGGGC--------------------------------------------------------------------------------------------TTGAGGCCAAAAACACCATTTTT-----------------ATCTT-A--------------GAAGTCCAAGCGTCT-GTATCTTTTGTA---------------------------------TGTACATATG------TACAACGATTGAA-TCGGAAGATAAGTAAACACCATAAAC-------------------------AG
droFic1 scf7180000453858:1564125-1564371 + GGAACTTAAGAAAATCACCACCATTGTTGCTGACACCGGCGACTTTGAAGGTAAATATACAAAT-----------ATACACTAGAATTCAC----------TAG---------------------------------------------------TTTTATA------TTTCAAAGTAAAGCTTAACTCTTATCA------------------------------------------------------------------------------------------------------------------------------------------AAGCCGGGAGTCTTGAGCCG--GGTAATACAAAAGTG------------------------------TG-TGATCC-----CAGGCCC----------------------------------------------------ATATACTT-----------------------------------------------------ATGT------------------ACACATG------GTCAAATTTCGACCATTT-ACATATTTTGT----------------------------------------TATT------TACAGAAATTGAT-CTGAATGATAGACA--------------------------------------A
droEle1 scf7180000491214:5257039-5257325 - GGAATTAAAGAAAATTACCACCATTGTCGCAGACACCGGCGACTTTGAAGGTAAATATACACTCCA--T------------------TTGG----------A----------CTT------GTAGATACA---------TATCTACACCG-GCA---TACAATTCTACG-----------------C---TCCCC------------------------------------------------------------------------------------------------------------------------------------------AAGCTGGAAAT---GTATCT--TGAAATACAAACGCATGG--------TTGTACATATACATATGTCTG-TGGACC-----CGGGC--------------------------------------------------------------------------------------------TCAA------GAACATTCGATTT-----------------ACTTA-CATACAGACACAGTTCAGGTTTAAGCAATT-ACATAGTTTGTA-------------------------------------------------AACATAGGATGAA-CCAAAAGATAAACATAA-------GACACCAGA-------------------G
droRho1 scf7180000766026:3901-4182 + AGAACTTAAGAAAATCACCACCATCGTCGCAGATACCGGCGACTTTGAAGGTAAATATACTCTCCA--T------------------ATAC----------A-GTTACA------------------------------TATCTTCTCCG-G-----ACCGA------ATTTAATGTAAA------TCT--GCCA------------------------------------------------------------------------------------------------------------------------------------------AAGCTGGGGATGAATCATCT--TGAAGTACAAACGCATA------------------T---TATGTTTG-TAACCC-----AGAGC--------------------------------------------------------------------------------------------TCGA------AAACATTCGATTT-----------------ACTTA-AATACA------GTCCAAGT------TTCT-GCATCGCTTGTA-------------------------------------CATATGTAATGTAACGTAAGTTGAA-CCAAAAGATACACATAAACCATAGGCCATTTGA-------------------G
droBia1 scf7180000302143:353062-353341 + GGAACTTAAGAAAATCACCACCATTGTGGCTGACACCGGCGACTTTGAAGGTAAATATGGAAACCT--T----------------AT--AC-----------AGGCAGT-TATCGTAGCC-----------------------------G-GCAGTGCCCGG------TTTCAAAGGGAAC-CGAGCTCCTCC-C------------------------------------------------------------------------------------------------------------------------------------------CATCCGGGGCTCTTGAGTCT--GGAAGTTCCAACGTGTGG-TG--------------TTTGTGTGTCTG-TGGATC-----TGAGC--------------------------------------------------------------------------------------------TCAG------GAACATTCGTTTT-----------------CACT-GCATACA------GTCCGAGTCCAAAGATAC-ATA----------------------------------------------------------------GATTGGATTCGAAAGATAAACACAAACGATGGGCCATCAGA------------------GC
droTak1 scf7180000415878:950830-951100 + GGAACTTAAGAAAATCACCACTATTGTGGCTGACACCGGTGACTTTGAAGGTAAATATGGACATT-----------GT-------ATACAC----------A-ATTA--------------------------------TAACTACGCCG-GCAGGGCCTGG------TTTTAAAGTAAA-GTAATCTTT-ACCC------------------------------------------------------------------------------------------------------------------------------------------AAGCTGGGGATGG-CAATCT--TGAAATACAAACTCATG------------------TT----TGTCTG-TCGATC-----TGAGC--------------------------------------------------------------------------------------------TCGG------GAACATCCATTTC-----------------TACT-ACACACA------GTTCGAGTCCAACGAGTC-ATATCGCTTGCA-------------------------------------------------TACACAGATTGAATCTGAAAGATAAACATAAA----------------------------------A
droEug1 scf7180000409464:200294-200577 + AGAACTCAAGAAAATCACCACAATTGTGGCTGACACCGGTGACTTTGAGGGTAAATATACACTCTA--T------------------TT----------------------ATCT------ATAAATAAA---------TACCTCTGCCG-GCAGTATTCAA------TTGCAAAGTGTACGTAAGCTGCTCACA------------------------------------------------------------------------------------------------------------------------------------------AAGCT------------CACCAAAATATTCAAACTCATG------------------TTGGTATGTTTG-TGGATC-----TCACC--------------------------------------------------------------------------------------------TCTT------GAACATCAAATTT-----------------TCCTA-CATACA------G-CCGGGTCCAAAGAGTC-ATATTGCACGCA-------------------------------------------------TACATAAATTGAA-CTGAAAGATAAACATAAACT-TAAGGCATTGAA-------------------G
dm3 chr2R:19828000-19828247 + GGAACTCAAGAAAATCACCACAATTGTGGCTGACACCGGCGACTTTGAAGGTAAGTACGCACGCA-------------------------------------AGGTATT-TTTCTTAACA-----------------------------A-GATGAGTCCGA------TTTCAAAGCTAGCGTAAGTTTGCCTCAAAAGTGGGAATCCAGAAAT----------GCAACTAAAGCGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TG-CGAGTC-----TGAGCTCGAACAT----------------------------------------------------------------------------------------------------CC-----ATACATATATAGAGCAT-----ACATAGA------ATCCGAGTCCAAAGATAC-ATA------GGA-------------------------------------------------TACATGGATTTAT-CCAAAAGAT--------------------------------------------
droSim2 2r:20328743-20328986 + dsi_7240 GGAACTCAAGAAAATCACCACAATTGTGGCTGACACCGGCGACTTTGAAGGTAAGTGCGCACGC-----------ATG-------GT--AA----------AAGGTATT-TTTCTTAAGA-----------------------------A-GATGAGTCCGA------TTT--------------------CCCAAAACTGCGAATCCAGAAAT----------GCAACTTAAGCGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TG-CGATTC-----TGAGCTCGAAGAT--------------------------------------------------------------------------------------------------AT-------ATACATATATAGAATAT-----ACATAGA------ATTCGAGTCCAAAGATAC-ATA------GGA-------------------------------------------------TACATGGATTTAT-CCATTAGATAAACATGA-----------------------------------A
droSec2 scaffold_9:3112031-3112274 + GGAACTCAAGAAAATCACCACAATTGTGGCTGACACCGGCGACTTTGAAGGTAAGTACGCACGC-----------ATG-------GT--AA----------AAGGTATT-TTTCTTAAGA-----------------------------A-GATGAGTCCGA------TTT--------------------CCCAAAACTGGGAATCCAGAAAT----------GCAAATTAAGCGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TG-CGATTC-----TGAGCTCGAAGAT--------------------------------------------------------------------------------------------------AC-------ATACATATATAGAATAT-----ACATATA------ATTGGAGTCCAAAGATAC-ATA------GGA-------------------------------------------------TACATGGATTTAT-CCAATAGATAAACATTA-----------------------------------A
droYak3 2R:19805435-19805694 + dya_627 GGAACTCAAGAAAATCACCACAATTGTGGCTGACACCGGCGACTTTGAAGGTAAGTGCGCACCC-----------ATG-------GG--AA----------AAGATATA-TCTTTAAGCA-----------------------------A-GATGAGTCCGA------TTTTAAAGCGAACGTAAGCTTGTCTGAAAACTGGAAG-------------------------------------------------------------------------------------------------------------------------------------------------TCT--AGAAATGCAAACGCATG------------------CTCGTATGTTTG-TGGATC-----TGATC--------------------------------------------------------------------------------------------TCGGAGACAAATAAACAAT-------CAT-------ATAT-----ACATACA------TTCCCGGTCCGGTGATAC-ATA------GGA-------------------------------------------------TACATGGATTTAT-CCAAAAGAT--------------------------------------------
droEre2 scaffold_4845:21200611-21200882 + GGAACTCAAGAAAATCACCACCATTGTGGCTGACACCGGCGACTTTGAAGGTAAGTACGCACTC-----------ATG-------GT--AA----------AAGATATA-TCTCTAAGCA-----------------------------A-GATAAGTGAGA------TTTCAAAGCAAACGTAAGCTTGTCCCCAATTTGGAAG-------------------------------------------------------------------------------------------------------------------------------------------------TTT--AGAAATGCAACCGCATG------------------TTCGTTTGTTTG-TGGATC-----TGAGC--------------------------------------------------------------------------------------------TCGGAGACATATAAACAAT--------------CAGATAT-----ACATACA------GTGCAAATCCAAAGATAC-ATA------GGA-------------------------------------------------TACATGGATTTAT-CCAAAAGATAAACATGAAC--------------------------------GA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
ACAACTTAAACAAGTGACCACAATAGTGGCTGACACCGGCGACTTTGAAGGTACATATATAAGG-----------TTC-------ATATAT----------AAGTTGTGTTTTGTTAAAA-----------------------------A-G---A-----------------------------------------------------------------------AGTTAATTTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------GC-TAAGTT-----TGATCTGGAATATACACACACACACACATACAAAAGCTGAAACATGCTTTCTAAGGTAAATGTATGTATGTATGTATGCTGTACAGGTTCAATGATA---------------ATC---------AT-------AAAT-----A---------------------------------------TGTA---------------------------------TGTACGT----------ACGTA--CGTAC-ATAAAA---------------------------------------------AASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................AGTGGCTGACACCGGCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020200000000
......TAAACAAGTGACCACAATAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
......TAAACAAGTGACCACAATAGTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
......................................................................................TATAT----------AAGTTGTGTTTTGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGGTAAATGTATGTATGTA......................................................................................................................................................................................................................................2121.0020100001000
...............GACCACAATAGTGGCTGACACCGGCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.................................CACCGGCGACTTTGAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAACATGCTTTCTAAGG......................................................................................................................................................................................................................................................2011.0010100000000
..........................TGGCTGACACCGGCGACTTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................ATAT----------AAGTTGTGTTTTGTTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........................GGCTGACACCGGCGACTTTGAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..................CACAATAGTGGCTGACACCGGCGACTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
...............GACCACAATAGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.................................CACCGGCGACTTTGAAGGTAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TT-----TGATCTGGAATATACACAC...........................................................................................................................................................................................................................................................................................2120.5011000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGTAAATGTATGTATGTA......................................................................................................................................................................................................................................2020.5010000010000
..........................................................................................................................................................................................................................................TTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------GC-TAAGTT-----TGATCTGG......................................................................................................................................................................................................................................................................................................2120.5010100000000
............................................................................................................................................................................................................................................AAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------GC-TAAGTT-----TGATCTGGAA....................................................................................................................................................................................................................................................................................................2120.5010000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AGTT-----TGATCTGGAATATACAC.............................................................................................................................................................................................................................................................................................2120.5010100000000
............................................................................................................................................................................................................................................AAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------GC-TAAGTT-----TGATCTGC......................................................................................................................................................................................................................................................................................................1920.5010100000000
.............................................................................................................................................................................................................................................AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------GC-TAAGTT-----TGATCTGGAAT...................................................................................................................................................................................................................................................................................................2120.5010000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----A---------------------------------------TGTA---------------------------------TGTACGT----------ACGTA--...........................................................1890.1110100000000
droPer2
ACAACTTAAACAAGTGACCACAATAGTGGCTGACACCGGCGACTTTGAAGGTACATATATAAGG-----------TTC-------ATATAT----------AAGTTGTGTTTTGTTAAAA-----------------------------A-G---A-----------------------------------------------------------------------AGTTAATTTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------GC-TAAGTT-----TGATCTGGAATATACACACACACACACATACAAAAGCTGAAACATGCTTTCTAAGGTAAATGTATGTATGTATGTATGCTGTTCAGGTTCAATGATA-------------------------------------------------------------------------GTC-ATA------------------------------------------------------------------------------AATATGTATGT-----------------------------------ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................CTGACACCGGCGACTTTGAAGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002200000
........................................................................................TAT----------AAGTTGTGTTTTGTTAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
...............................GACACCGGCGACTTTGAAGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............GACCACAATAGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..............................TGACACCGGCGACTTTGAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
................................ACACCGGCGACTTTGAAGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....................................................................................................................................................................................................................................GTTAATTTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------GC-TAAGTT-----TG............................................................................................................................................................................................................................................................................................................2120.501000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGGAATATACACACA..........................................................................................................................................................................................................................................................................................1920.501010000
droWil2
ACAGCTAAAAAAAGTTACCACGATTGTAGCAGACACTGGTGATTTTGAAGGTATGTACATATATT-----------GCCACT----TTCGG----------CAG---------------------------------------------A-TTTGTATCCAA------TTT-----------------------------AC------------ATCCATAGATTTCAT---------------------------TCCCATACATCAATATA-----ATAGTGTAAAACAAATATAAAAAAA----------------------------------------------------------------------------------------------------------------------------------------ACATGCAACAGGTTTCACA-------------------------------------------------------------------------------------------------------------------------------TT-TTTTTTTTATC---------------------------------------------------AAAATTATTCAA-ATTAAA---------------------------------------------AASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............GTTACCACGATTGTAGCAGACACTGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2715.00502120
..................CACGATTGTAGCAGACACTGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200110
...............TACCACGATTGTAGCAGACACTGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00210010
............................GCAGACACTGGTGATTTTGAAGGTATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000
...GCTAAAAAAAGTTACCACGATTGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
.................CCACGATTGTAGCAGACACTGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.............................................TGAAGGTATGTACATATATT-----------GC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
......................ATTGTAGCAGACACTGGTGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
................ACCACGATTGTAGCAGACACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...........................AGCAGACACTGGTGATTTTGAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
................ACCACGATTGTAGCAGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
...............TACCACGATTGTAGCAGACACTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000
.............GTTACCACGATTGTAGCAGACACTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.......................TTGTAGCAGACACTGGTGATTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.............GTTACCACGATTGTAGCAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
......................ATTGTAGCAGACACTGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
................ACCACGATTGTAGCAGACACTGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
......................ATTGTAGCAGACACTGGTGATTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.................CCACGATTGTAGCAGACACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..................CACGATTGTAGCAGACAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
.........................GTAGCAGACACTGGTGATTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
...............TACCACGATTGTAGCAGACACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
.....................GATTGTAGCAGACACTGGTGATTTTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
...............TACCACGATTGTAGCAGACACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
....................CGATTGTAGCAGACACTGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
............AGTTACCACGATTGTAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.........AAAAGTTACCACGATTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
droVir3
ACAGCTTAAAAATTTAACAACCATTGTTGCTGATACCGGCGATTTTGATGGTAAATTTGTTCAATAATT-------ATCACT----CATACAATTATGAATTACGTACT--ATTTAAAGC-----------------------------A-TATAAGTATTA------ATT--------------------ATTTTAATATCGTTTTAAGTATC---------AGT-------------------------------------------------------------------------------------------------------------------------------------ATGTTAAGCTATG------------------TTA------ATG-TGGCTA-----TAAGT--------------------------------------------------------------------------------------------GTGG------GTACAT----------------------------A-CATACA------T-ACAAATTAAAAGGTTAGGTT-TGTTGTGGTTTATAAA----------TTAAAACAGCATGTATGTACATATG------------------------------------T-----------------------------------ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................AAGTATC---------AGT-------------------------------------------------------------------------------------------------------------------------------------ATGTTAAGCTA..........................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000001000000000000000000000000000000000000000000010
..................AACCATTGTTGCTGATACCGGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000020
...............................................................................................ATGAATTACGTACT--ATTTAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAAAAGGTTAGGTT-TGTTGTG.....................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................TTTAAGTATC---------AGT-------------------------------------------------------------------------------------------------------------------------------------ATGTTAAG.............................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAAA----------TTAAAACAGCATGTATGTA...............................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..................AACCATTGTTGCTGATACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..................AACCATTGTTGCTGATACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATAAA----------TTAAAACAGCATG.....................................................................................2111.001000000000000000000010000000000000000000000000000000000000000000
.................CAACCATTGTTGCTGATACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GGCTA-----TAAGT--------------------------------------------------------------------------------------------GTGG------GTAC...............................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................AAGT--------------------------------------------------------------------------------------------GTGG------GTACAT----------------------------A-CATA...........................................................................................................................................................1911.001000000001000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TAAGT--------------------------------------------------------------------------------------------GTGG------GTACAT----------------------------A-CATAC..........................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGTTAGGTT-TGTTGTGGT...................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000100
..............TAACAACCATTGTTGCTGATACCGGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
ACAGCTTAAGAAAATAACTACAATTGTAGCGGATACCGGCGATTTTGATGGTAAATAGAAGGAA-----------GT----------------------------T-------------------------------------------------------------------------------------------------------------------------ATTAAATTGGAAAATTATCCTAGTTTTTAGTACAAGCATTTATGTACATATATAAAGTAAAACAAACAAAAGTCGAACTCATTCACCTCGAGTTTAACTTTTATTTGAACTTCACGCATTCTGCAC--GTTCATTCAATC--------------------------------CTA-TGGTAT-----TACAC--------------------------------------------------------------------------------------------GT------------------------------------------------------------------------------------GTA-------------------------------------------------TACATACATACA---TGTAA---------------------------------------------ATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................................................................................................................................................TTGAACTTCACGCATTCTGCAC--GT.......................................................................................................................................................................................................................................................................................................................................................................2411.001100000
......................ATTGTAGCGGATACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
droGri2
ACAACTTAAAAAGATTACCACCATTGTTGCCGATACCGGCGATTTTGATGGTGAGTTTTATTAACA--A------AC--ACT---------------------CG--------------AA---------GTTTTTCTT---------TATTTTTAATCA--------CCTTAAAGTAAATAACATATTGTCTTA-----TCTAC---------ATACATACATGT---------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------TG-CGTAAC-----TAT--------ATACACACACATATATATATAAGTGCATATGCA-----------------------------------------------------------------------------------------------------------------CCTTTTTTAAAGGTTA-AAT-ATTTGTATTACATTAATTGATTTATGCCGGAACAACTACTATATTCATCTA------------------------------------G---------------ATATTCTTTACATCCACCTAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTA------------------------------------G---------------ATATTCTTTACATCC......2111.00110
droAna3
GGAACTCAAGCAAGTCACCACAATTGTTGCTGACACCGGCGACTTTGAAGGTAAATATCCGGTT-----------GC--------ATTCAG----------A----------------------------CATTTTGGG---------TGCCCAGAATCAGA-------TTTAAAGTAAA------CTT--TCCA------------------------------------------------------------------------------------------------------------------------------------------AAGCCGGATCG---GTGTCT--CAAAG----AG------ATTGTATGTGTGTGTATGGGTGTACTCTTTCAAAATTTGATCCAAGCCCT---------------------------------------------------GTGAGC--------------------------------CCT-------------------------------------GCG---AGCAT------------AGTCCAAACAATT-TTATCGTTTCC---------------------------------------------------ACATAGATTCAA-TTGAAAGAT--------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............CACCACAATTGTTGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002110000
...........................TGCTGACACCGGCGACTTTGAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
.................CCACAATTGTTGCTGACACCGGCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.....................................................................................ATTCAG----------A----------------------------CATTTTGGG---------TGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................................................................................................................................................................................................................................................................................................................................................................G------ATTGTATGTGTGTGTATGGG....................................................................................................................................................................................................................................................................................................................................2111.001000010
..............................................................................................................................................................................................................................................................................................................................................................TCT--CAAAG----AG------ATTGTATGTGT.............................................................................................................................................................................................................................................................................................................................................2111.001000010
................................ACACCGGCGACTTTGAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
GGAACTCAAGCAAGTCACCACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CCCT---------------------------------------------------GTGAGC--------------------------------CCT-------------------------------------GCG---AGCAT------------..............................................................................................................................................2111.001100000
...............................GACACCGGCGACTTTGAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..................CACAATTGTTGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
....................................................................................................................................................................................................................................................................................................................................................................................ATTGTATGTGTGTGTATGGGT...................................................................................................................................................................................................................................................................................................................................2111.001000010
droBip1
GGAACTCAAGCAAGTCACCACAATTGTTGCTGACACCGGCGACTTTGAAGGTAAATATCCGGTT-----------ACA-------------------------CGCAAA---------------------CATTTTGGG---------TGCCCAGATTCAGA-------TTTAAAGTAAA------CTT--TCCA------------------------------------------------------------------------------------------------------------------------------------------AAGCCGCATCG---GTGTCT--CAAAA----AG--------TGTATGTGTGTG----TATATACTCTTT-AGAATA-----TGATC--------------------------------------------------------------------------------------------CGAG------GACCATTCCCTTT-----------------GCGTG-CAT--------------AGTCCAAATAATT-TTATCGTTTCC---------------------------------------------------ACATGGATTCAA-TTGAAAGA---------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AGAACTTAAGCAAGTCACCACAATTGTGGCTGACACCGGCGACTTTGAAGGTAAACCACCACCACCTGTATACATATT-------A----------------------------TAGCTA-----------------------------G-GCTGAGTCCGA------TTTCCAAGTGAACGTAAGTC-GCTTCA------------------------------------------------------------------------------------------------------------------------------------------AAGCCGCGAGT---GAATCT--CAAAGTACAAGCGTGTG------------------TATCTCCGTAAG-TCCCCG-----TGGGC--------------------------------------------------------------------------------------------TTGAGGCCAAAAACACCATTTTT-----------------ATCTT-A--------------GAAGTCCAAGCGTCT-GTATCTTTTGTA---------------------------------TGTACATATG------TACAACGATTGAA-TCGGAAGATAAGTAAACACCATAAAC-------------------------AGSizeHit CountTotal NormTotal
No Reads
droFic1
GGAACTTAAGAAAATCACCACCATTGTTGCTGACACCGGCGACTTTGAAGGTAAATATACAAAT-----------ATACACTAGAATTCAC----------TAG---------------------------------------------------TTTTATA------TTTCAAAGTAAAGCTTAACTCTTATCA------------------------------------------------------------------------------------------------------------------------------------------AAGCCGGGAGTCTTGAGCCG--GGTAATACAAAAGTG------------------------------TG-TGATCC-----CAGGCCC----------------------------------------------------ATATACTT-----------------------------------------------------ATGT------------------ACACATG------GTCAAATTTCGACCATTT-ACATATTTTGT----------------------------------------TATT------TACAGAAATTGAT-CTGAATGATAGACA--------------------------------------ASizeHit CountTotal NormTotal
No Reads
droEle1
GGAATTAAAGAAAATTACCACCATTGTCGCAGACACCGGCGACTTTGAAGGTAAATATACACTCCA--T------------------TTGG----------A----------CTT------GTAGATACA---------TATCTACACCG-GCA---TACAATTCTACG-----------------C---TCCCC------------------------------------------------------------------------------------------------------------------------------------------AAGCTGGAAAT---GTATCT--TGAAATACAAACGCATGG--------TTGTACATATACATATGTCTG-TGGACC-----CGGGC--------------------------------------------------------------------------------------------TCAA------GAACATTCGATTT-----------------ACTTA-CATACAGACACAGTTCAGGTTTAAGCAATT-ACATAGTTTGTA-------------------------------------------------AACATAGGATGAA-CCAAAAGATAAACATAA-------GACACCAGA-------------------GSizeHit CountTotal NormTotal
No Reads
droRho1
AGAACTTAAGAAAATCACCACCATCGTCGCAGATACCGGCGACTTTGAAGGTAAATATACTCTCCA--T------------------ATAC----------A-GTTACA------------------------------TATCTTCTCCG-G-----ACCGA------ATTTAATGTAAA------TCT--GCCA------------------------------------------------------------------------------------------------------------------------------------------AAGCTGGGGATGAATCATCT--TGAAGTACAAACGCATA------------------T---TATGTTTG-TAACCC-----AGAGC--------------------------------------------------------------------------------------------TCGA------AAACATTCGATTT-----------------ACTTA-AATACA------GTCCAAGT------TTCT-GCATCGCTTGTA-------------------------------------CATATGTAATGTAACGTAAGTTGAA-CCAAAAGATACACATAAACCATAGGCCATTTGA-------------------GSizeHit CountTotal NormTotal
No Reads
droBia1
GGAACTTAAGAAAATCACCACCATTGTGGCTGACACCGGCGACTTTGAAGGTAAATATGGAAACCT--T----------------AT--AC-----------AGGCAGT-TATCGTAGCC-----------------------------G-GCAGTGCCCGG------TTTCAAAGGGAAC-CGAGCTCCTCC-C------------------------------------------------------------------------------------------------------------------------------------------CATCCGGGGCTCTTGAGTCT--GGAAGTTCCAACGTGTGG-TG--------------TTTGTGTGTCTG-TGGATC-----TGAGC--------------------------------------------------------------------------------------------TCAG------GAACATTCGTTTT-----------------CACT-GCATACA------GTCCGAGTCCAAAGATAC-ATA----------------------------------------------------------------GATTGGATTCGAAAGATAAACACAAACGATGGGCCATCAGA------------------GCSizeHit CountTotal NormTotal
No Reads
droTak1
GGAACTTAAGAAAATCACCACTATTGTGGCTGACACCGGTGACTTTGAAGGTAAATATGGACATT-----------GT-------ATACAC----------A-ATTA--------------------------------TAACTACGCCG-GCAGGGCCTGG------TTTTAAAGTAAA-GTAATCTTT-ACCC------------------------------------------------------------------------------------------------------------------------------------------AAGCTGGGGATGG-CAATCT--TGAAATACAAACTCATG------------------TT----TGTCTG-TCGATC-----TGAGC--------------------------------------------------------------------------------------------TCGG------GAACATCCATTTC-----------------TACT-ACACACA------GTTCGAGTCCAACGAGTC-ATATCGCTTGCA-------------------------------------------------TACACAGATTGAATCTGAAAGATAAACATAAA----------------------------------ASizeHit CountTotal NormTotal
No Reads
droEug1
AGAACTCAAGAAAATCACCACAATTGTGGCTGACACCGGTGACTTTGAGGGTAAATATACACTCTA--T------------------TT----------------------ATCT------ATAAATAAA---------TACCTCTGCCG-GCAGTATTCAA------TTGCAAAGTGTACGTAAGCTGCTCACA------------------------------------------------------------------------------------------------------------------------------------------AAGCT------------CACCAAAATATTCAAACTCATG------------------TTGGTATGTTTG-TGGATC-----TCACC--------------------------------------------------------------------------------------------TCTT------GAACATCAAATTT-----------------TCCTA-CATACA------G-CCGGGTCCAAAGAGTC-ATATTGCACGCA-------------------------------------------------TACATAAATTGAA-CTGAAAGATAAACATAAACT-TAAGGCATTGAA-------------------GSizeHit CountTotal NormTotal
No Reads
dm3
GGAACTCAAGAAAATCACCACAATTGTGGCTGACACCGGCGACTTTGAAGGTAAGTACGCACGCA-------------------------------------AGGTATT-TTTCTTAACA-----------------------------A-GATGAGTCCGA------TTTCAAAGCTAGCGTAAGTTTGCCTCAAAAGTGGGAATCCAGAAAT----------GCAACTAAAGCGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TG-CGAGTC-----TGAGCTCGAACAT----------------------------------------------------------------------------------------------------CC-----ATACATATATAGAGCAT-----ACATAGA------ATCCGAGTCCAAAGATAC-ATA------GGA-------------------------------------------------TACATGGATTTAT-CCAAAAGAT--------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................CGACTTTGAAGGTAAGTACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000010000000000101000
....................CAATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................AACTAAAGCGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TG-CGAGTC-----TGAG..........................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ACCGGCGACTTTGAAGGTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GACACCGGCGACTTTGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATTGTGGCTGACACCGGCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CAATTGTGGCTGACACCGGCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..AACTCAAGAAAATCACCACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...................ACAATTGTGGCTGACACCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000
......................ATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000
.......................................CGACTTTGAAGGTAAGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGA------ATCCGAGTCCAAAG.....................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GGCTGACACCGGCGACTTTGAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CAATTGTGGCTGACACCGGCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................GTGGGAATCCAGAAAT----------GCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000
....................CAATTGTGGCTGACACCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000
........................TGTGGCTGACACCGGCGACTTTGAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CTGACACCGGCGACTTTGAAGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
GGAACTCAAGAAAATCACCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................GCAACTAAAGCGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TG-CG.......................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........AAAATCACCACAATTGTGGCTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATTGTGGCTGACACCGGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................................CGGCGACTTTGAAGGTAAGTACGCACGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGGCTGACACCGGCGACTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CGACTTTGAAGGTAAGTACGCACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ACAATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TGAAGGTAAGTACGCACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................TTTGAAGGTAAGTACGCACGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...........................................TTTGAAGGTAAGTACGCACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...............................................AAGGTAAGTACGCACGCA-------------------------------------AGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....TCAAGAAAATCACCACAATTGTGGCTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................GACTTTGAAGGTAAGTACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................TGTGGCTGACACCGGCGACTTTGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CAATTGTGGCTGACACCGGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AT----------------------------------------------------------------------------------------------------CC-----ATACATATATAGAGCAT-----ACATAG..........................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................AACA-----------------------------A-GATGAGTCCGA------TTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGA------ATCCGAGTCCAAAGA....................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGGCTGACACCGGCGACTTTGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAT-----ACATAGA------ATCCGAGT...........................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGACACCGGCGACTTTGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ACCACAATTGTGGCTGACACCGGCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGGCTGACACCGGCGACTTTGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AATCACCACAATTGTGGCTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GGCTGACACCGGCGACTTTGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GCGACTTTGAAGGTAAGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ACCGGCGACTTTGAAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGTGGCTGACACCGGCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GGCGACTTTGAAGGTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
.................CCACAATTGTGGCTGACACCGGCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CGGCGACTTTGAAGGTAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
....................................................................................................................................................................................CGTAAGTTTGCCTCAAAAGTGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGTGGCTGACACCGGCGACTTTGAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ACCGGCGACTTTGAAGGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...........................GGCTGACACCGGCGACTTTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CGGCGACTTTGAAGGTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGATAC-ATA------GGA-------------------------------------------------TACAT..............................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CTTTGAAGGTAAGTACGCACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CAAGAAAATCACCACAATTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GAGTC-----TGAGCTCGAACAT----------------------------------------------------------------------------------------------------CC-----ATAC..................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAAGTACGCACGCA-------------------------------------AGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................ACTTTGAAGGTAAGTACGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................TGAGTCCGA------TTTCAAAGCTAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..................CACAATTGTGGCTGACACCGGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTGTGGCTGACACCGGCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................AAGTTTGCCTCAAAAGTGGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................TTTGAAGGTAAGTACGCACGCA-------------------------------------AGGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......AAGAAAATCACCACAATTGTGGCTGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................GAAGGTAAGTACGCACGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............CACCACAATTGTGGCTGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TCCAGAAAT----------GCAACTAAAGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................GGCTGACACCGGCGACTTTGAAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................AATTGTGGCTGACACCGGCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................ACACCGGCGACTTTGAAGGTAAGTACGCATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ACAATTGTGGCTGACACCGGCGACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................AAAGTGGGAATCCAGAAAT----------GCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GGAACTCAAGAAAATCACCACAATTGTGGCTGACACCGGCGACTTTGAAGGTAAGTGCGCACGC-----------ATG-------GT--AA----------AAGGTATT-TTTCTTAAGA-----------------------------A-GATGAGTCCGA------TTT--------------------CCCAAAACTGCGAATCCAGAAAT----------GCAACTTAAGCGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TG-CGATTC-----TGAGCTCGAAGAT--------------------------------------------------------------------------------------------------AT-------ATACATATATAGAATAT-----ACATAGA------ATTCGAGTCCAAAGATAC-ATA------GGA-------------------------------------------------TACATGGATTTAT-CCATTAGATAAACATGA-----------------------------------ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............TCACCACAATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000001100000000
..............................TGACACCGGCGACTTTGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
..............................TGACACCGGCGACTTTGAAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
.....................................GGCGACTTTGAAGGTAAGTGCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000100000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAGAT--------------------------------------------------------------------------------------------------AT-------ATACATATATAG..........................................................................................................................................................................2111.00100000100000000000
..................CACAATTGTGGCTGACACCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
..............TCACCACAATTGTGGCTGACACCGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATATAGAATAT-----ACATAGA------...................................................................................................................................................2111.00100000100000000000
GGAACTCAAGAAAATCACCACAATTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
....................CAATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.............................................TGAAGGTAAGTGCGCACGC-----------ATG-------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000100000000000
..............................TGACACCGGCGACTTTGAAGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
.............ATCACCACAATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
........................TGTGGCTGACACCGGCGACTTTGAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
..................................ACCGGCGACTTTGAAGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1841.00421100000000000000
...........................................................................................................................................................................................................................................GAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TG-CGATTC-----TGAGCTCG......................................................................................................................................................................................................................................................................................................2011.00101000000000000000
...................ACAATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
............AATCACCACAATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
.....................AATTGTGGCTGACACCGGCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGATAC-ATA------GGA-------------------------------------------------TACATG.............................................................2111.00110000000000000000
.................................CACCGGCGACTTTGAAGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50110000000000000000
droSec2
GGAACTCAAGAAAATCACCACAATTGTGGCTGACACCGGCGACTTTGAAGGTAAGTACGCACGC-----------ATG-------GT--AA----------AAGGTATT-TTTCTTAAGA-----------------------------A-GATGAGTCCGA------TTT--------------------CCCAAAACTGGGAATCCAGAAAT----------GCAAATTAAGCGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TG-CGATTC-----TGAGCTCGAAGAT--------------------------------------------------------------------------------------------------AC-------ATACATATATAGAATAT-----ACATATA------ATTGGAGTCCAAAGATAC-ATA------GGA-------------------------------------------------TACATGGATTTAT-CCAATAGATAAACATTA-----------------------------------ASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAAGATAC-ATA------GGA-------------------------------------------------TACATGGA...........................................................2611.0011000
......................ATTGTGGCTGACACCGGCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...............CACCACAATTGTGGCTGACACCGGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
.....................................GGCGACTTTGAAGGTAAGTAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
.......................................................TACGCACGC-----------ATG-------GT--AA----------AAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
......................ATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...................ACAATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
..................................ACCGGCGACTTTGAAGGTAAGTACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
..........................................................GCACGC-----------ATG-------GT--AA----------AAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
....................CAATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
............................................................................................................................................................................................................................................AAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TG-CGATTC-----TGAGCTCGAT....................................................................................................................................................................................................................................................................................................2111.0010100
...........................GGCTGACACCGGCGACTTTGAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
.......................................CGACTTTGAAGGTAAGTACGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
droYak3
GGAACTCAAGAAAATCACCACAATTGTGGCTGACACCGGCGACTTTGAAGGTAAGTGCGCACCC-----------ATG-------GG--AA----------AAGATATA-TCTTTAAGCA-----------------------------A-GATGAGTCCGA------TTTTAAAGCGAACGTAAGCTTGTCTGAAAACTGGAAG-------------------------------------------------------------------------------------------------------------------------------------------------TCT--AGAAATGCAAACGCATG------------------CTCGTATGTTTG-TGGATC-----TGATC--------------------------------------------------------------------------------------------TCGGAGACAAATAAACAAT-------CAT-------ATAT-----ACATACA------TTCCCGGTCCGGTGATAC-ATA------GGA-------------------------------------------------TACATGGATTTAT-CCAAAAGAT--------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................CAATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00300300000000
.................CCACAATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200200000000
.......................................................................................................................................................................................AAGCTTGTCTGAAAACTGGAAG-------------------------------------------------------------------------------------------------------------------------------------------------T.............................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.....................AATTGTGGCTGACACCGGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
....................CAATTGTGGCTGACACCGGCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................C-----TGATC--------------------------------------------------------------------------------------------TCGGAGACAAATAAAC.............................................................................................................................................................................................2211.00100000010000
GGAACTCAAGAAAATCACCACAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
....................CAATTGTGGCTGACACCGGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GTTTG-TGGATC-----TGATC--------------------------------------------------------------------------------------------TCGGA........................................................................................................................................................................................................2111.00100000010000
...............CACCACAATTGTGGCTGACAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.................................CACCGGCGACTTTGAAGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.00220000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GTTTG-TGGATC-----TGATC--------------------------------------------------------------------------------------------TCGGAGACAA...................................................................................................................................................................................................2611.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................CT--AGAAATGCAAACGCATG------------------CT....................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...ACTCAAGAAAATCACCACAATTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
.....................AATTGTGGCTGACACCGGCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-----ACATACA------TTCCCGGTCCGGTGAT...................................................................................................................................2511.00100000010000
...............CACCACAATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
.............ATCACCACAATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
...............................GACACCGGCGACTTTGAAGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
..................CACAATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACA------TTCCCGGTCCGGT......................................................................................................................................1911.00100000010000
.....................AATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GTATGTTTG-TGGATC-----TGATC--------------------------------------------------------------------------------------------TCGGAGAC.....................................................................................................................................................................................................2811.00100000010000
...........................GGCTGACACCGGCGACTTTGAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
.........................................................................................................................................................................................GCTTGTCTGAAAACTGGAAG-------------------------------------------------------------------------------------------------------------------------------------------------T.............................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
......................ATTGTGGCTGACACCGGCGACTTTGAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GTTTG-TGGATC-----TGATC--------------------------------------------------------------------------------------------TCGGAGA......................................................................................................................................................................................................2311.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACA------TTCCCGGTCCGGTGATAC-ATA------GG.....................................................................................................................2811.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-----ACATACA------TTCCCGGTCCGGT......................................................................................................................................2211.00100000010000
...................ACAATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.....................................................................................................................................................................................GTAAGCTTGTCTGAAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
...............................GACACCGGCGACTTTGAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
...................................................................................................................AAGCA-----------------------------A-GATGAGTCCGA------TTTTAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
droEre2
GGAACTCAAGAAAATCACCACCATTGTGGCTGACACCGGCGACTTTGAAGGTAAGTACGCACTC-----------ATG-------GT--AA----------AAGATATA-TCTCTAAGCA-----------------------------A-GATAAGTGAGA------TTTCAAAGCAAACGTAAGCTTGTCCCCAATTTGGAAG-------------------------------------------------------------------------------------------------------------------------------------------------TTT--AGAAATGCAACCGCATG------------------TTCGTTTGTTTG-TGGATC-----TGAGC--------------------------------------------------------------------------------------------TCGGAGACATATAAACAAT--------------CAGATAT-----ACATACA------GTGCAAATCCAAAGATAC-ATA------GGA-------------------------------------------------TACATGGATTTAT-CCAAAAGATAAACATGAAC--------------------------------GASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................ACCACCATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0031100010
.............ATCACCACCATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030300000
.......AAGAAAATCACCACCATTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000200
......................ATTGTGGCTGACACCGGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0021000010
.......................................................................................................................................................................................................................................................................................................................................................................ATGCAACCGCATG------------------TTCGTT................................................................................................................................................................................................................................................................................................................................1911.0010000010
...ACTCAAGAAAATCACCACCATTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.......................................................................................................................................................................................AAGCTTGTCCCCAATTTGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
..............................TGACACCGGCGACTTTGAAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TTTG-TGGATC-----TGAGC--------------------------------------------------------------------------------------------TCGGA........................................................................................................................................................................................................2011.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATAC-ATA------GGA-------------------------------------------------TACATGG............................................................2111.0011000000
.....................CATTGTGGCTGACACCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001000
..................CACCATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
..AACTCAAGAAAATCACCACCATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
..AACTCAAGAAAATCACCACCATTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
...................ACCATTGTGGCTGACACCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
.............................................................................................................................................................................................................................................................................................................................................................................................................GTTTG-TGGATC-----TGAGC--------------------------------------------------------------------------------------------TC...........................................................................................................................................................................................................1811.0010000010
.GAACTCAAGAAAATCACCACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...................ACCATTGTGGCTGACACCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100

Generated: 05/17/2015 at 11:43 PM