ID:

dps_907

 Coordinate:

3:408171-408321 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.5 -24.5 -24.5

Flybase annnotation

CDS [Dpse\GA21384-cds]; exon [dpse_GLEANR_14985:4]; intron [Dpse\GA21384-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCTTTTCCCTACCTGTACAACAATATGCCGCACTTTGTTCATCTAAGCTGGTAAGTAAGTGGGAGAGAGGGAATGGGTATCTGTGCAACTACTGAATTTGCGCGTTGCTTGATGCGTTGCCAGTTGAGAACTTCACTGGAAACGTTTCGCATCGCGGTAGATAAACGAAACACTCCCAGCTTACTACTAATTTAGCGATTAAAGGGAGTTGCAATGAATATGTTCGTGATGATTGAACAGCATAAATCGTT
************************************************************************************************....((((.(((..((.(((((.(((((.((.....))))))).))))).))))).)))).....................************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 V112
male body		 SRR902011
testis
 GSM343916
embryo
 SRR902012
CNS imaginal disc
................................................................................................TTTGCGCGTTGCTTGATGCGTTGCC.................................................................................................................................. 25 0 1 4.00 4 1 2 0 0 1 0
........................................................................................................................................................CGCGGTAGATAAACGAAACACTCCC.......................................................................... 25 0 1 2.00 2 0 1 0 0 0 1
........................................................................................................................................TGGAAACGTTTCGCATCGCGG.............................................................................................. 21 0 1 2.00 2 1 0 0 1 0 0
.........................................................................................................................................................GCGGTAGATAAACGAAACACTCCC.......................................................................... 24 0 1 2.00 2 1 1 0 0 0 0
.......................................................................................................................................................TCGCGGTAGATAAACGAAACACTCCC.......................................................................... 26 0 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................................................................................................AAGGGAGTTGCAATGAATT............................... 19 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TTTGCGCGTTGCTTGATGCG....................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0
.........................................................................................................................................................GCGGTAGATAAACGAAACACTCCCA......................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................ATTAAAGGGAGTTGCAATGAAT................................ 22 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................................AAAGGGAGTTGCAATGAA................................. 18 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................................AAAGGGAGTTGCAATGAAT................................ 19 0 1 1.00 1 1 0 0 0 0 0
................................................................................................TTTGCGCGTTGCTTGATGCGTTGCCA................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0
.............................................................................................................................................................................................................GGGTTGCAATGAATATGTTCGTGAA..................... 25 2 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................................................GCGGTAGATAAACGAAACACTCCCAG........................................................................ 26 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................TGCGCGTTGCTTGATGCGTTGCC.................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................GTTCGTGATGATTGAACAGCAT........ 22 0 1 1.00 1 0 0 0 1 0 0
.............................................................................................................................................................................................................................GTTCGTGATGATTGAACAGCATA....... 23 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................TTGCGCGTTGCTTGATGCGTTGCCA................................................................................................................................. 25 0 1 1.00 1 0 0 0 0 1 0
................................................................................................TTTGCGCGTTGCTTGATGCGTT..................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................CGCGGTAGATAAACGAAACACC............................................................................. 22 1 1 1.00 1 0 1 0 0 0 0
.............................................................................................................................................................................................................................GTTCGTGATGATTGAACAGC.......... 20 0 1 1.00 1 0 1 0 0 0 0
..........................................................................................................................GTTGAGAACTTCACTGGA............................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................TTCACTGGAAACGTTTCGCATCGCGGTA............................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................TTCACTGGAAACGTTTCGCATCGCGG.............................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0
...................................................................................................................................GTCACTGTAAACGTTTAGCA.................................................................................................... 20 3 7 0.29 2 2 0 0 0 0 0
.............................................................................................................................AAGAACTGCACTGTAAACGTT......................................................................................................... 21 3 4 0.25 1 1 0 0 0 0 0
....................................ATTCATCAAAGCTGGTAAGA................................................................................................................................................................................................... 20 3 7 0.14 1 1 0 0 0 0 0
........................................................................................................................................................................................................................AATATATGCGCGATGATTG................ 19 3 14 0.07 1 1 0 0 0 0 0
....................................................AAGTAGGTGGGATGGAGGGA................................................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

CGAAAAGGGATGGACATGTTGTTATACGGCGTGAAACAAGTAGATTCGACCATTCATTCACCCTCTCTCCCTTACCCATAGACACGTTGATGACTTAAACGCGCAACGAACTACGCAACGGTCAACTCTTGAAGTGACCTTTGCAAAGCGTAGCGCCATCTATTTGCTTTGTGAGGGTCGAATGATGATTAAATCGCTAATTTCCCTCAACGTTACTTATACAAGCACTACTAACTTGTCGTATTTAGCAA
**************************************************************************....((((.(((..((.(((((.(((((.((.....))))))).))))).))))).)))).....................************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total V112
male body		 M040
female body
.AAAAAGTGATGGGCATGTTGT..................................................................................................................................................................................................................................... 21 3 6 0.17 1 1 0
.................................AAACAAGTAATTTCGGCCAT...................................................................................................................................................................................................... 20 3 11 0.09 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 3:408121-408371 - dps_907 GCTTTTCCCTACCTGTACAACAATATGCCGCACTTTGTTCATCTAAGCTGGTAAGTAAG-------TGG----G-AGAGAGGGAATGGGTATCTGTGCAACTAC---------TGAATT-----------------TGCGCGTTGCTTGATGCGTTGCCAGTTGAG-AACTTCACTGG-AAACGTTTCGCATCGCGGTAGATAAACGAAACACTCCC-AGCTTACTACTAATTTAGCGATTAA-------AGGGAGTTGCAATGA-ATATGTTCGTGATGATTGAACAGCATAAATCGTT
droPer2 scaffold_2:592560-592810 - dpe_984 GCTTTTCCCTACCTGTACAACAATATGCCGCACTTTGTGCATCTAAGCTGGTAAGTAAG-------TGG----G-AGAGAGGGAATGGGTATCTGTGCAACTAC---------TGAATT-----------------TGCGCGTTGCTTGATGCGTTGCCAGTTGAG-AACTTCACTGG-AAACGTTTCGCATCGCGGTAGATAAACGAAACACTCCC-AGCTTACTACTAATTTAGCGATTAA-------AGGGAGTTGCAATGA-ATATGTTCGTGATGATTGAACAGCATAAATCGTT
droWil2 scf2_1100000004954:3252071-3252216 + AT-----------------------------------------------------------------------------------------------------------------------------------------------------GCGTTGTCAATTTAT-AAATATATTAG-CAGCGCCTAATGACATGTAAGAATAATGAAACACTCCCAAGTTTACTACCAATTTAGCGATAATGG---TGAGGGAGATGCAATGAGAAATGTTCGTTATGATTGCAAAGACTAAGTCATA
droVir3 scaffold_12875:19837884-19838133 + dvi_8030 GCGTTTCCATACCTGTACAACAATATGCCGCATTTTGTGCATCTGAGCTGGTAAACGAAC------TTATCTTTA-----------------------------CGATTGTAT------ATGTAGTT--AGATATATTTACATGGC-CGTAGAGTTCCCAGTTGTACGCATATACTGG-TAACGCTTCATGCCATGTTAGATCAAACAATAAGGCCC-GATTTACTACCAATTTAGCGATTGATTCC---TGGGTTTTGCAATGT-GAATGTTCGTTCCGATTGTGGAACTTAAATCTGG
droMoj3 scaffold_6496:6366411-6366663 - GCATTTCCATATCTATACAACAATATGCCACACTTTGTGCATCTCAGCTGGTAAATTACT------TAATTTCTA-----------------------------TATAT--AT------TTATGTAATTATTTATAGTTACAAGGC-CGTAGAGTTTCCAGTCTAAGACATTGGCTGG-CAACGCTTCAAGCCATGTTAGATTAAAAAACCACGCCC-AATTTACTACCAATTTAGCGATTGTCTTCGAATGGGCGGTGCAATGT-AAATGTTCGTTATGATTTTGTAGACTAAATTTTA
droGri2 scaffold_15245:18186557-18186808 + GCGTTTCCATATCTGTACAACAATATGCCACATTTTGTGCATCTAAGCTGGTAAGAAATT------AATTTTTAT-----------------------------ATATATCAA------TA-TGTAT--ATAGACATGTACATGGC-AGTAGAGTTTCCAGTTGAAGTTGCCTGCTGGCAAACACTTTATGCCCTGTTAGAGC-ACACCAAACGCCC-AACTTACTACCAATTTAGCGATTGTTTCCTTTTGGGAAGTGCAATGT-GAATGTTCGTTACGATTTTCTAGACTAAATCGCG
droBip1 scf7180000396759:1638369-1638607 + GCTTTTCCCTATTTGTACAACAATATGCCCCACTTTGTGCATCTGAGCTGGTAAGATCC---------------------------------------------AAATAATACT-----CATTTCCT--ATTCATATTTACGTGCA-AGTAACGTTTCCAAGTTAATCCCTATGCTGG-AAATGCTTCATGGCACGTGAGAACAACGATGAGCTCCC-AGTTTACTACCAATATTGCGATAAAA-----ACGGGAGCTGCAATGA-GAATGTCCGTAGCGATTGTGGATTTTAAATCGAT
droKik1 scf7180000302367:402816-403068 + GCCTTTCCCTACCTGTACAACAACATGCCGCACTTTGTGCACCTGAGCTGGTAAGACCTCGTGGAGGTTTCCCCC-----------------------------TTAAATATT------ACATCTAA--AGTATCATTTACGTGGT-AGTAACGTTTCCAAGTGAAAAGCATCGCTGG-AAGGGCTTCATGCCACGTTAGATAAACGTCCTGCTCCCCAGCTTACTACCAATTTTGCGATTAA-------AGGGAGCTGCAATGA-TAATGTTCGTGGCGATTGAAGAGATTAGATCGTG
droFic1 scf7180000453809:444844-445089 - GCCTTTCCCTACTTGTACAACAACATGCCACACTTTGTGCATCTGAGCTGGTAAGATCCC------ATATCCTTT-----------------------------TGAAATGAT------TAACCTAA--AATCTCATTTACGTGGT-AGTAACGTTTCCAAGTGAACAACCTCGCTGG-AAATGCTTCATGTCGCGTTAGAATAACGTCGAGCTCCC-AGCTTACTACCAATTTTGCGATAAA-------CGGGAGCTGCAATGA-ATATGTTCGTGGCGATTGTTAAGAATAAATCGTG
droEle1 scf7180000491214:3582870-3583115 - GCTTTTCCCTACTTGTACAACAATATGCCACATTTCGTGCACCTGAGCTGGTAAGACCTC------CTATTCTTC-----------------------------AGAAATTAT------TAATCTAA--AATCTTATTTACGTGGT-AGTAACGTTTCCAAGTGAACAACCTCGCTGG-AAATGCTTCATGTCGCGTTAGAAAAAGGTCGAGCTCCC-AGCTTACTACCAATATTGCGATAAA-------CGGGAGCTGCAATGA-ATATGTTCGTGGCGATTGTTAAGAATAAATCGTG
droRho1 scf7180000779932:487841-488086 - GCCTTTCCCTACTTGTACAACAATATGCCGCACTTTGTGCACCTGAGCTGGTAAGGTCCT------TCATTCTTC-----------------------------AGAAATTTT------TAATCTTA--AATTTTATTTACGTGGT-AGTAACGTTTCCAAGTGAACATCCTCGCTGG-AAATGCTTCATGTCGCGTTAGAAAAACGTCGAGCTCCC-AGCTTACTACCAATTTTGCGATAAA-------AGGGAGCTGCAATGA-ATATGTTCGTGGCGATTGTTAAGAATAAATCGTG
droBia1 scf7180000302292:864510-864754 - GCCTTCCCCTATTTATACAACAACATGCCACACTTTGTACATCTGAGCTGGTAAGATTCC------ACATTATTC-----------------------------TGAAATTAT------TAATCTAA--AATCTTATTTACGTGGT-AGTAACGTTTCCAAGTGAATATCCTCGCTGG-AAATGCTTCATGTCGCGTTAGAAAAACGTCGAGCTCCC-AGCTTACTACAAATTTTGCGATAAA-------CGGGAGCTGCAATGA--TATGTTCGTGGCGATTGTTAAGAATAAATCGTG
droTak1 scf7180000415260:193236-193473 + GCCTTTCCCTACTTGTACAACAATATGCCGCACTTTGTACATCTAAGCTGGTAAGATTCC------CTATTCTTC-----------------------------AGAAATTAT------TAATCTAA--GATCTTGTTTACGTGGT-AGTAACGTTTCCATGTGAACAGCCTCGCTGG-AAACGCTTCATCACACGTTAGAGAAACGTCGAGCTCCC-----TACTACAAA---TGCGATAAA-------CGGGAGCTGCAATC--CTATGTTCGTGGCGATTGTTAAGAATAAATCGCG
droEug1 scf7180000409462:414976-415221 + GCGTTTCCCTACTTGTACAACAATATGCCGCACTTTGTACATCTGAGCTGGTAAGATCTA------TTATTCTCC-----------------------------AAAAATTAT------TAATCTAA--AATCTTATTTACGTGGT-AGTAACGTTTCCAAGTGAACGGCCATGCTGG-AAATGCTTCATGTCGCGTTAGAAAAACGTCGAGCTCCC-AGCTTACTACCAATTTTGCGATAAA-------CGGGAGCTGCAATAA-ATATGTTCGTGGCGATTGTTAAGAATAAATCGTG
dm3 chr2R:8048654-8048901 - GCCTTTCCTTACTTGTACAACAATATGCCACACTTTGTGCATTTGAGCTGGTAAGAGTCC------ACATTCTTC-----------------------------AAAAATTAC------CATTCTAA--AATCTTATTTACGTGGTTAGAAACGTTTCCAAGTGATCAGCCTCTCTGG-AAATGCTTCATGCCGCGTTAGAAAAACGACGAGCTCCC-AGGTTACTGCCAAATTTGCGATAAA------ACGGGAGCTGCAATGA-ATATGTTCGTGGCGATTGTTAAGAATTAATCGTG
droSim2 2r:8753063-8753310 - GCCTTCCCTTACTTGTACAACAATATGCCGCACTTTGTGCATTTGAGCTGGTAAGAACCC------ACATTATTC-----------------------------AAAAATTAC------CATTCTAA--AATCTTATTTACGTGGTTAGAAACGTTTCCAAGTGAACAGCCTCTCTGG-AAATGCTTCATGCCGCGTTAGAAAAACGACGAGCTCCC-AGGTTACTGCCAAATTTGCGATAAA------ACGGGAGCTGCAATGA-ATATGTTCGTGGCGATTGTTAAGAATTAATCGTG
droSec2 scaffold_1:5593718-5593965 - GCCTTCCCTTACTTGTACAACAATATGCCGCACTTTGTGCATTTGAGCTGGTAAGAGCCC------ACATTCTTC-----------------------------GAAAATTAC------CATTCTAA--AATCTTATTTACGTGGTTAGAAACGTTTCCAAGTGAACAGCCTCTCTGG-AAATGCTTCATGCCGCGTTAGAAAAACGACGAGCTCCC-AGGTTACTGCCAAATTTGCGATAAA------ACGGGAGCTGCAATGA-ATATGTTCGTGGCGATTGTTAAGAATTAATCGTG
droYak3 2R:8902436-8902682 + GCCTTTCCTTACTTGTACAACAATATGCCGCACTTTGTGCATTTGAGCTGGTAAGATCCC------ACATTCCTC-----------------------------CAAAATTAT------TATTCTAA--AATACTATTTACGTGGTCAGAAACGTTTCTAAGTGAACAGCCTCTCTGG-AAATGCTTCATGCCGCGTCAGAAAAACGACGAGCTTCC-AGGATACTGTCAAATTTGCGATAAA-------CGGGAGCTGCAATGA-ATATGTTCGTGGCGATTGTTCAGAATTAATCGTG
droEre2 scaffold_4845:17745325-17745571 + GCCTTTCCGTATTTGTACAACAATATGCCGCACTTTGTGCATTTGAGCTGGTAAGATCCC------ACATTCCTC-----------------------------CAATATGAT------TATTCTAA--CATCTTATTTACGTGGTCAAGAACGTTTCCAAGTGAACAGCCTCTCTGG-AAATGCTTCATGCCGCGTTAGAAAAACGACGAGCTCTC-AGGTTACTGCCAAATTTGCGATAAA-------CGGGAGCTGCAATGA-ATATGTTCGTGGCGATTGTTAAGAATTAATCGTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GCTTTTCCCTACCTGTACAACAATATGCCGCACTTTGTTCATCTAAGCTGGTAAGTAAG-------TGG----G-AGAGAGGGAATGGGTATCTGTGCAACTAC---------TGAATT-----------------TGCGCGTTGCTTGATGCGTTGCCAGTTGAG-AACTTCACTGG-AAACGTTTCGCATCGCGGTAGATAAACGAAACACTCCC-AGCTTACTACTAATTTAGCGATTAA-------AGGGAGTTGCAATGA-ATATGTTCGTGATGATTGAACAGCATAAATCGTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................TT-----------------TGCGCGTTGCTTGATGCGTTGCC.............................................................................................................................................2514.0040120100000
................................................................................................................................................................................................CGCGGTAGATAAACGAAACACTCCC-..................................................................................2512.0020010000001
...............................................................................................................................................................................TGG-AAACGTTTCGCATCGCGG.......................................................................................................2112.0020100000010
.................................................................................................................................................................................................GCGGTAGATAAACGAAACACTCCC-..................................................................................2412.0020110000000
...............................................................................................................................................................................................TCGCGGTAGATAAACGAAACACTCCC-..................................................................................2611.0010010000000
..................................................................................................................................................................................................................................................A-------AGGGAGTTGCAATGA-ATT...............................1911.0010100000000
.....................................................................................................................TT-----------------TGCGCGTTGCTTGATGCG..................................................................................................................................................2011.0010000001000
.................................................................................................................................................................................................GCGGTAGATAAACGAAACACTCCC-A.................................................................................2511.0010100000000
..............................................................................................................................................................................................................................................ATTAA-------AGGGAGTTGCAATGA-AT................................2211.0010100000000
.................................................................................................................................................................................................................................................AA-------AGGGAGTTGCAATGA-A.................................1811.0010100000000
.................................................................................................................................................................................................................................................AA-------AGGGAGTTGCAATGA-AT................................1911.0010100000000
.....................................................................................................................TT-----------------TGCGCGTTGCTTGATGCGTTGCCA............................................................................................................................................2611.0010000001000
.................................................................................................................................................................................................GCGGTAGATAAACGAAACACTCCC-AG................................................................................2611.0010100000000
........................................................................................................................................TGCGCGTTGCTTGATGCGTTGCC.............................................................................................................................................2311.0010100000000
..............................................................................................................................................................................................................................................................................GTTCGTGATGATTGAACAGCAT........2211.0010000000010
..............................................................................................................................................................................................................................................................................GTTCGTGATGATTGAACAGCATA.......2311.0010010000000
......................................................................................................................T-----------------TGCGCGTTGCTTGATGCGTTGCCA............................................................................................................................................2511.0010000100000
.....................................................................................................................TT-----------------TGCGCGTTGCTTGATGCGTT................................................................................................................................................2211.0010100000000
................................................................................................................................................................................................CGCGGTAGATAAACGAAACACC......................................................................................2211.0010010000000
..............................................................................................................................................................................................................................................................................GTTCGTGATGATTGAACAGC..........2011.0010010000000
................................................................................................................................................................GTTGAG-AACTTCACTGG-A........................................................................................................................1811.0010010000000
..........................................................................................................................................................................TTCACTGG-AAACGTTTCGCATCGCGGTA.....................................................................................................2811.0010010000000
..........................................................................................................................................................................TTCACTGG-AAACGTTTCGCATCGCGG.......................................................................................................2611.0010000001000
droPer2
GCTTTTCCCTACCTGTACAACAATATGCCGCACTTTGTGCATCTAAGCTGGTAAGTAAG-------TGG----G-AGAGAGGGAATGGGTATCTGTGCAACTAC---------TGAATT-----------------TGCGCGTTGCTTGATGCGTTGCCAGTTGAG-AACTTCACTGG-AAACGTTTCGCATCGCGGTAGATAAACGAAACACTCCC-AGCTTACTACTAATTTAGCGATTAA-------AGGGAGTTGCAATGA-ATATGTTCGTGATGATTGAACAGCATAAATCGTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................AACGTTTCGCATCGCGGTA.....................................................................................................1913.003300000
..........................................................................................................................................................................................................................................................................ATATGTTCGTGATGATTGAACAG...........2312.002200000
..........................................................................................................................................................................................................................................................................ATATGTTCGTGATGATTGAAC.............2112.002200000
................................................................................................................................................................................................CGCGGTAGATAAACGAAACACTCCC-AGC...............................................................................2812.002100001
....................................................................................................................................................................................AACGTTTCGCATCGCGGTAGA...................................................................................................2112.002200000
................................................................................................................................................................GTTGAG-AACTTCACTGG-A........................................................................................................................1812.002200000
..............................................................................................................................................................................................................................................................................GTTCGTGATGATTGAACAGC..........2012.002101000
....................................................................................................................................................................................................................................................................AATGA-ATATGTTCGTGATGATTGAACAGC..........2912.002200000
....................................................................................................................................................................................AACGTTTCGCATCGCGGTAGAT..................................................................................................2211.001001000
.....................................................................................................................TT-----------------TGCGCGTTGCTTGATGCG..................................................................................................................................................2011.001000001
.................................TTTGTGCATCTAAGCTGGTG.......................................................................................................................................................................................................................................................2011.001010000
.......................................................................................................................................................................................................................CC-AGCTTACTACTAATTTAGC...............................................................2111.001001000
.....................................................................................................................TT-----------------TGCGCGTTGCTTGATGCGTTGCCA............................................................................................................................................2611.001001000
...........................................................................................................................................................................................................................................GCGATTAA-------AGGGAGTTGCAATGA-ATA...............................2611.001000001
................................................................................................................................................................................................CGCGGTAGATAAACGAAACACTCCC-A.................................................................................2611.001010000
....................................................................................................................................................................................AACGTTTCGCATCGCGGTAGATAA................................................................................................2411.001010000
..................................................................................................................................................................................................................................................................................GTGATGATTGAACAGCATAAATCGT.2511.001000001
...........................................................................................................................................................................TCACTGG-AAACGTTTCGCATCGCGGT......................................................................................................2611.001000001
........................................................................................................................................TGCGCGTTGCTTGATGCGTTGCC.............................................................................................................................................2311.001010000
.................................................................................................................................................................................................GCGGTAGATAAACGAAAC.........................................................................................1811.001100000
....................................................................................................................................................................................AACGTTTCGCATCGCGGTAGATAAACG.............................................................................................2711.001100000
...............................................................................................................................................................................................................................................................................TTCGTGATGATTGAACAGC..........1911.001001000
droWil2
AT-----------------------------------------------------------------------------------------------------------------------------------------------------GCGTTGTCAATTTAT-AAATATATTAG-CAGCGCCTAATGACATGTAAGAATAATGAAACACTCCCAAGTTTACTACCAATTTAGCGATAATGG---TGAGGGAGATGCAATGAGAAATGTTCGTTATGATTGCAAAGACTAAGTCATASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................ATGTAAGAATAATGAAACACTCC....................................................................................2314.00431000
................................................................................................................................................................................................................................................AATGG---TGAGGGAGATGCAATGAGAAAT..............................2713.00300210
................................................................................................................................................................................................................................................................ATGCAATGAGAAATGTTCGTTATGATT.................2712.00220000
.................................................................................................................................................................................................ATGTAAGAATAATGAAACACTCCC...................................................................................2412.00210010
...............................................................................................................................................................................................ACATGTAAGAATAATGAAACACTCCCA..................................................................................2711.00110000
.............................................................................................................................................................................................................................................GATAATGG---TGAGGGAGATGCAATGAGA.................................2711.00100100
................................................................................................................................................................................................................................................................ATGCAATGAGAAATGTTCGTTATGAT..................2611.00110000
....................................................................................................................................................................................................................................................................AATGAGAAATGTTCGTTATGAT..................2211.00100010
..............................................................................................................................................................................................................................................................AGATGCAATGAGAAATGTTCGTT.......................2311.00100010
.................................................................................................................................................................................................ATGTAAGAATAATGAAACACT......................................................................................2111.00110000
...................................................................................................................................................................................................................................................GG---TGAGGGAGATGCAATGAGAAAT..............................2411.00100100
............................................................................................................................................................................................................................................................................ATGTTCGTTATGATTGCAAAGACTA.......2511.00100010
...................................................................................................................................................................................................................................................GG---TGAGGGAGATGCAATG....................................1811.00100010
................................................................................................................................................................................................................................................AATGG---TGAGGGAGATGCAATGAG..................................2311.00100100
.............................................................................................................................................................................................................................................GATAATGG---TGAGGGAGATGCAATGAG..................................2611.00100100
.................................................................................................................................................................................................ATGTAAGAATAATGAAACACTCCCAAG................................................................................2711.00100010
........................................................................................................................................................................................................................................................TGAGGGAGATGCAATGAGAA................................2011.00100010
................................................................................................................................................................................AG-CAGCGCCTAATGACATGTAAG....................................................................................................2311.00100010
........................................................................................................................................................................................................................................................TGAGGGAGATGCAATGAGA.................................1911.00100001
.................................................................................................................................................................................................ATGTAAGAATAATGAAACACTCCCAAGTT..............................................................................2911.00110000
................................................................................................................................................................................................................................................................................TCGTTATGATTGCAAAGACTAAGT....2411.00100010
..............................................................................................................................................................................................GACATGTAAGAATAATGAAACACTCCCA..................................................................................2811.00110000
.......................................................................................................................................................................................GCCTAATGACATGTAAGAATAATG.............................................................................................2411.00100100
.......................................................................................................................................................................................................................................................................GAGAAATGTTCGTTATGATTG................2111.00100100
...................................................................................................................................................................................................................................................GG---TGAGGGAGATGCAATGAGAAA...............................2311.00100100
..............................................................................................................................................................................................................................................................................GTTCGTTATGATTGCAAAGACTAAGTCAT.2911.00110000
................................................................................................................................................................................................................................................................ATGCAATGAGAAATGTTCGT........................2011.00100100
..................................................................................................................................................................................................................................ACCAATTTAGCGATAATGG---TGAGGGA.............................................2611.00100100
....................................................................................................................................................................................................................................................................................TATGATTGCAAAGACTAAGT....2011.00100100
....................................................................................................................................................................................................TAAGAATAATGAAACACTC.....................................................................................1911.00110000
............................................................................................................................................................................................................................................CGATAATGG---TGAGGGAGATGCAATGAG..................................2711.00100100
..........................................................................................................................................................................................................................................AGCGATAATGG---TGAGGGAGATGC........................................2311.00100100
.......................................................................................................................................................................................................................................................................................GATTGCAAAGACTAAGTCAT.2011.00100100
..................................................................................................................................................................................................................................................TGG---TGAGGGAGATGCAATGAGAAA...............................2411.00100001
..............................................................................................................................................................................TTAG-CAGCGCCTAATGACATGTAAGA...................................................................................................2611.00100100
...............................................................................................................................................................................................................................................................GATGCAATGAGAAATGTTCGTTATGAT..................2711.00100100
................................................................................................................................................................................................................................................AATGG---TGAGGGAGATGCAATGAGA.................................2411.00100010
................................................................................................................................................................................................CATGTAAGAATAATGAAACACTC.....................................................................................2311.00100010
....................................................................................................................................................................................................................................................................AATGAGAAATGTTCGTTATGATTG................2411.00100010
droVir3
GCGTTTCCATACCTGTACAACAATATGCCGCATTTTGTGCATCTGAGCTGGTAAACGAAC------TTATCTTTA-----------------------------CGATTGTAT------ATGTAGTT--AGATATATTTACATGGC-CGTAGAGTTCCCAGTTGTACGCATATACTGG-TAACGCTTCATGCCATGTTAGATCAAACAATAAGGCCC-GATTTACTACCAATTTAGCGATTGATTCC---TGGGTTTTGCAATGT-GAATGTTCGTTCCGATTGTGGAACTTAAATCTGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................ATTTACATGGC-CGTAGAGTTCCCAGTT.........................................................................................................................................27123.00230000000000000000000000000000000000000000000000000000000000000023
.......................................................................................................................................ATTTACATGGC-CGTAGAGTTCCCAGT..........................................................................................................................................26121.00210000000000000000000000000000000000000000000000000000000000000021
........................................................................................................................................TTTACATGGC-CGTAGAGTTCCC.............................................................................................................................................22121.0021016200100000000000002000000000000010000000000000000000000004040
........................................................................................................................................TTTACATGGC-CGTAGAGTTCCCAGT..........................................................................................................................................25114.0014002300000000000000000000000000000000000000000000000000000011043
.......................................................................................................................................ATTTACATGGC-CGTAGAGTTCCCAGTTGT.......................................................................................................................................29113.00130000000000000000000000000000000000000000000000000000000000000013
........................................................................................................................................TTTACATGGC-CGTAGAGTTCCCA............................................................................................................................................2319.009004100000000000000000010000000010000000000000000000000000000020
.......................................................................................................................................ATTTACATGGC-CGTAGAGTTCC..............................................................................................................................................2217.007000000000000000000000000000000000000000000000000000000000000007
...................................................................................................................................................................................TAACGCTTCATGCCATGTTAG....................................................................................................2115.005000000000000000100000000000000030000100000000000000000000000000
........................................................................................................................................TTTACATGGC-CGTAGAGTTCCCAGTTGT.......................................................................................................................................2815.005000100000000000100000000000000000000000000000000000000000000003
.................................................................................................................................................................................................ATGTTAGATCAAACAATAAGGCCC-..................................................................................2415.005000000000000000111000000000000010000100000000000000000000000000
........................................................................................................................................TTTACATGGC-CGTAGAGTTCCCAG...........................................................................................................................................2413.003001100000000000000000000000000000000000000000000000000000001000
........................................................................................................................................TTTACATGGC-CGTAGAGTTCC..............................................................................................................................................2113.003101000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TGTTCGTTCCGATTGTGGAAC..........2113.003000000000000000000000000000000000000000000000000000000000000003
.......................................................................................................................................ATTTACATGGC-CGTAGAGTTCCCAGTTGTAC.....................................................................................................................................3113.003000000000000000000000000000000000000000000000000000000000000003
........................................................................................................................................TTTACATGGC-CGTAGAGTTCCCAGTTG........................................................................................................................................2713.003001000000000000000000000011000000000000000000000000000000000000
.......................................................................................................................................ATTTACATGGC-CGTAGAGTTCCCAGTTG........................................................................................................................................2812.002000000000000000000000000000000000000000000000000000000000000002
.......................................................................................................................................................GAGTTCCCAGTTGTACGCATATACTGG-T........................................................................................................................2812.002002000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................ATCAAACAATAAGGCCC-GATTTACTA.........................................................................2612.002000000000000000000000000000000000000000000000000000000000000002
.......................................................................................................................................ATTTACATGGC-CGTAGAGTTCCC.............................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000002
................................................................................................................................................................................................................................................................TTGCAATGT-GAATGTTCGTTCC.....................2212.002000000000000000000000000100000000000000000000000000000000000010
.................................................................................................................................................................................................ATGTTAGATCAAACAATAA........................................................................................1912.002001000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................CATGGC-CGTAGAGTTCCCA............................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................CAAACAATAAGGCCC-GAT...............................................................................1811.001000000000000000010000000000000000000000000000000000000000000000
............................................................................................................................................................................................ATGCCATGTTAGATCAAACAA...........................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................CCATGTTAGATCAAACAATAAGGCCC-G.................................................................................2711.001100000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................ATGTTAGATCAAACAATAAGG......................................................................................2111.001000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................AATAAGGCCC-GATTTACTACCAATT...................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................ATGCCATGTTAGATCAAACAATA.........................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................GATTCC---TGGGTTTTGCAATGT-GAAT..............................2511.001001000000000000000000000000000000000000000000000000000000000000
.......................TATGCCGCATTTTGTGCATCTGAGCTGGT........................................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................TAGAGTTCCCAGTTGTACGC...................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................TCATGCCATGTTAGATCAAACA............................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................................................AGTTGTACGCATATACTG...........................................................................................................................1811.001000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................ATTTACATGGC-CGTAGAGTTCCCAG...........................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000001
...............................................................................................................................................................................................CCATGTTAGATCAAACAATAAG.......................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................GT-GAATGTTCGTTCCGATTGTGGAAC..........2611.001000000000000000000000000000000000000000000000000000000000000001
.............................................................................................................................................................................................................................................................................TGTTCGTTCCGATTGTGG.............1811.001000000000001000000000000000000000000000000000000000000000000000
...............................ATTTTGTGCATCTGAGCTG..........................................................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
.............TGTACAACAATATGCCGCATTTTGT......................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................ATTGATTCC---TGGGTTTTGCAATGT-GAAT..............................2811.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................GTAGAGTTCCCAGTTGTACGCA..................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TAACGCTTCATGCCATGTTAGATCA................................................................................................2511.001000000000000000000000000000000000000000000000000100000000000000
........................................................................................................................................TTTACATGGC-CGTAGAGTTCCCAGC..........................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000001
........................................................................................................................................TTTACATGGC-CGTAGAGTTCCCAGTTT........................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................CATGTTAGATCAAACAATAAGGCCC-GATT..............................................................................2911.001000000000000000000000000000000000000000000000000000000000010000
...........CCTGTACAACAATATGCCGCATTTTGT......................................................................................................................................................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................TAGATCAAACAATAAGGCCC-G.................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TACTACCAATTTAGCGATTG..........................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GTTAGATCAAACAATAAGGC.....................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................GCCATGTTAGATCAAACAAT..........................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GTTCGTTCCGATTGTGGC............1811.001000000000000000000000000000000000000000000000000000000000000001
.....................................................................................................................................................................................................TAGATCAAACAATAAGGCCC-GATT..............................................................................2411.001000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................TTTACATGGC-CGTAGAGTTCCCAGTTGTACGCA..................................................................................................................................3311.001000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................GCCATGTTAGATCAAACAA...........................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GTTTTGCAATGT-GAATGTTCGTTCC.....................2511.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................GATTTACTACCAATTTAGCGATT...........................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.................................TTTGTGCATCTGAGCTGGTACC.....................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GTTCGTTCCGATTGTGGA............1811.001000000000000000000000000000000000000000000000000000000000000001
....................................................................................................................................................................................................TTAGATCAAACAATAAGGCCC-GATT..............................................................................2511.001000000000000000000000000000000000000000000000000000000000000001
..................................................................................................................................................................................................................................................ATTCC---TGGGTTTTGCAATGT-GAAT..............................2411.001000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................ATGTTAGATCAAACAATAAGGCCC-GAT...............................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................TTACATGGC-CGTAGAGTTCCCA............................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................CAGTTGTACGCATATACTGG-T........................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................TTGATTCC---TGGGTTTTGC........................................1811.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................ATGTTAGATCAAACAATAAGGCCC-G.................................................................................2511.001100000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TACTACCAATTTAGCGAT............................................................1811.001000000000000000000000000010000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GTTCGTTCCGATTGTGGAAC..........2011.001000000000000000000000000000000000000000000000000000000000000001
...........................................................................................................................................................................................CATGCCATGTTAGATCAAACA............................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TTTGCAATGT-GAATGTTCGTTCC.....................2311.001000000000000010000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TGCCATGTTAGATCAAACAA...........................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................ATTTACTACCAATTTAGCGATT...........................................................2211.001000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................TTTACATGGC-CGTAGAGTTCCCAGTTGTA......................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000100
.............................................................................................................................................ATGGC-CGTAGAGTTCCCAGT..........................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................GCATTTTGTGCATCTGAGCTG..........................................................................................................................................................................................................................................................2111.001000000000000010000000000000000000000000000000000000000000000000
................................................................................................................................................................................GG-TAACGCTTCATGCCATGTTA.....................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................ATGTTAGATCAAACAATAAGGCCC-GATT..............................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................ATGGC-CGTAGAGTTCCCAGTT.........................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000001
...............................................................................................................................................................AGTTGTACGCATATACTGG-T........................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TGATTCC---TGGGTTTTGCAATGT-GAAT..............................2611.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
GCATTTCCATATCTATACAACAATATGCCACACTTTGTGCATCTCAGCTGGTAAATTACT------TAATTTCTA-----------------------------TATAT--AT------TTATGTAATTATTTATAGTTACAAGGC-CGTAGAGTTTCCAGTCTAAGACATTGGCTGG-CAACGCTTCAAGCCATGTTAGATTAAAAAACCACGCCC-AATTTACTACCAATTTAGCGATTGTCTTCGAATGGGCGGTGCAATGT-AAATGTTCGTTATGATTTTGTAGACTAAATTTTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................GTTACAAGGC-CGTAGAGTTTCC.............................................................................................................................................22159.005919001039
........................................................................................................................................GTTACAAGGC-CGTAGAGTTTCCAGT..........................................................................................................................................25156.005613000043
........................................................................................................................................GTTACAAGGC-CGTAGAGTTTCCA............................................................................................................................................23143.004314011027
........................................................................................................................................GTTACAAGGC-CGTAGAGTTTC..............................................................................................................................................2119.009200016
........................................................................................................................................GTTACAAGGC-CGTAGAGTTTCCAGTCTA.......................................................................................................................................2814.004000004
........................................................................................................................................GTTACAAGGC-CGTAGAGTTTCCAGTCT........................................................................................................................................2714.004000004
........................................................................................................................................GTTACAAGGC-CGTAGAGTTT...............................................................................................................................................2014.004000103
...............................................................................................................................................................AGTCTAAGACATTGGCTGG-C........................................................................................................................2014.004400000
........................................................................................................................................GTTACAAGGC-CGTAGAGTTTCCAGTC.........................................................................................................................................2613.003000003
................................................................................................................................................................GTCTAAGACATTGGCTGG-C........................................................................................................................1912.002200000
..........................................................................................................................................TACAAGGC-CGTAGAGTTTCC.............................................................................................................................................2012.002200000
................................................................................................................................................................................................................................................................GTGCAATGT-AAATGTTCGTTATGATT.................2612.002000002
....................................................................................................................................................................................................................................................TTCGAATGGGCGGTGCAATGT-..................................2111.001100000
............................................................................................................................................................................................................AAAAACCACGCCC-AATTTACTACC.......................................................................2411.001100000
................................................................................................................................................................................................................ACCACGCCC-AATTTACTACC.......................................................................2011.001100000
.....................................................................................................................................................TAGAGTTTCCAGTCTAAGACATTGGCT............................................................................................................................2711.001000001
................................................................................................................................................................................................................................................................GTGCAATGT-AAATGTTCGTT.......................2011.001000001
...............................................................................................................................................................................................CCATGTTAGATTAAAAAACCA........................................................................................2111.001000010
.................................................................................................................................................................................................................................................................TGCAATGT-AAATGTTCGTT.......................1911.001100000
.....................................................................................................................................................................................ACGCTTCAAGCCATGTTAGATT.................................................................................................2211.001100000
........................................................................................................................................GTTACAAGGC-CGTAGAGTTTCCC............................................................................................................................................2311.001001000
.......................................................................................................................................................................................................................................TTTAGCGATTGTCTTCGAATGGGC.............................................2411.001100000
.............................................................................................................................................................................................................AAAACCACGCCC-AATTTACTACC.......................................................................2311.001000010
......................................................................................................................................................................GACATTGGCTGG-CAACGC...................................................................................................................1811.001000010
................................................................................................................................................................................................CATGTTAGATTAAAAAACCA........................................................................................2011.001100000
.................................................................................................................................................................................................................................................................TGCAATGT-AAATGTTCGTTATGA...................2311.001100000
............................................................................................................................................CAAGGC-CGTAGAGTTTCCAGT..........................................................................................................................................2111.001100000
...................................................................................................................................................................................................................................................................CAATGT-AAATGTTCGTTATGA...................2111.001100000
...............................................................................................................................................................................................CCATGTTAGATTAAAAAACCACG......................................................................................2311.001100000
....................................................................................................................................................................................................................................................................AATGT-AAATGTTCGTTATGA...................2011.001100000
....................................................................................................................................................................AAGACATTGGCTGG-CAACG....................................................................................................................1911.001100000
.........................................................................................................................................................................................................TTAAAAAACCACGCCC-AATTTACTACC.......................................................................2711.001100000
.................................................................................................................................................................................................ATGTTAGATTAAAAAACCACGCC....................................................................................2311.001000010
..............................................................................................................................................AGGC-CGTAGAGTTTCCAGTCT........................................................................................................................................2111.001010000
..................................................................................................................................................................CTAAGACATTGGCTGG-CAACG....................................................................................................................2111.001100000
..........................................................................................................................................TACAAGGC-CGTAGAGTTTCCAGT..........................................................................................................................................2311.001000001
................................................................................................................................................................................................................................................................GTGCAATGT-AAATGTTCGTTATGA...................2411.001100000
..................................................................................................................................................................................................................................................................GCAATGT-AAATGTTCGTTATGA...................2211.001100000
................................................................................................................................................................................GG-CAACGCTTCAAGCCATGTTAGATTA................................................................................................2711.001100000
................................................................................................................................................................................................................................................TGTCTTCGAATGGGCGGTGCAAT.....................................2311.001001000
.........................................................................................................................................TTACAAGGC-CGTAGAGTTTCCAGT..........................................................................................................................................2411.001100000
droGri2
GCGTTTCCATATCTGTACAACAATATGCCACATTTTGTGCATCTAAGCTGGTAAGAAATT------AATTTTTAT-----------------------------ATATATCAA------TA-TGTAT--ATAGACATGTACATGGC-AGTAGAGTTTCCAGTTGAAGTTGCCTGCTGGCAAACACTTTATGCCCTGTTAGAGC-ACACCAAACGCCC-AACTTACTACCAATTTAGCGATTGTTTCCTTTTGGGAAGTGCAATGT-GAATGTTCGTTACGATTTTCTAGACTAAATCGCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................................................................CCTGTTAGAGC-ACACCAAACG......................................................................................2111.00110
.............................................................................................................................................................................................TGCCCTGTTAGAGC-ACACCA..........................................................................................2011.00110
..............................................................................................................................................................................................................................................................................GTTCGTTACGATTTTCTAGA..........2011.00110
........................................................................................................................................TGTACATGGC-AGTAGAGTTTCCA............................................................................................................................................2311.00101
droBip1
GCTTTTCCCTATTTGTACAACAATATGCCCCACTTTGTGCATCTGAGCTGGTAAGATCC---------------------------------------------AAATAATACT-----CATTTCCT--ATTCATATTTACGTGCA-AGTAACGTTTCCAAGTTAATCCCTATGCTGG-AAATGCTTCATGGCACGTGAGAACAACGATGAGCTCCC-AGTTTACTACCAATATTGCGATAAAA-----ACGGGAGCTGCAATGA-GAATGTCCGTAGCGATTGTGGATTTTAAATCGATSizeHit CountTotal NormTotal
No Reads
droKik1
GCCTTTCCCTACCTGTACAACAACATGCCGCACTTTGTGCACCTGAGCTGGTAAGACCTCGTGGAGGTTTCCCCC-----------------------------TTAAATATT------ACATCTAA--AGTATCATTTACGTGGT-AGTAACGTTTCCAAGTGAAAAGCATCGCTGG-AAGGGCTTCATGCCACGTTAGATAAACGTCCTGCTCCCCAGCTTACTACCAATTTTGCGATTAA-------AGGGAGCTGCAATGA-TAATGTTCGTGGCGATTGAAGAGATTAGATCGTGSizeHit CountTotal NormTotal
No Reads
droFic1
GCCTTTCCCTACTTGTACAACAACATGCCACACTTTGTGCATCTGAGCTGGTAAGATCCC------ATATCCTTT-----------------------------TGAAATGAT------TAACCTAA--AATCTCATTTACGTGGT-AGTAACGTTTCCAAGTGAACAACCTCGCTGG-AAATGCTTCATGTCGCGTTAGAATAACGTCGAGCTCCC-AGCTTACTACCAATTTTGCGATAAA-------CGGGAGCTGCAATGA-ATATGTTCGTGGCGATTGTTAAGAATAAATCGTGSizeHit CountTotal NormTotal
No Reads
droEle1
GCTTTTCCCTACTTGTACAACAATATGCCACATTTCGTGCACCTGAGCTGGTAAGACCTC------CTATTCTTC-----------------------------AGAAATTAT------TAATCTAA--AATCTTATTTACGTGGT-AGTAACGTTTCCAAGTGAACAACCTCGCTGG-AAATGCTTCATGTCGCGTTAGAAAAAGGTCGAGCTCCC-AGCTTACTACCAATATTGCGATAAA-------CGGGAGCTGCAATGA-ATATGTTCGTGGCGATTGTTAAGAATAAATCGTGSizeHit CountTotal NormTotal
No Reads
droRho1
GCCTTTCCCTACTTGTACAACAATATGCCGCACTTTGTGCACCTGAGCTGGTAAGGTCCT------TCATTCTTC-----------------------------AGAAATTTT------TAATCTTA--AATTTTATTTACGTGGT-AGTAACGTTTCCAAGTGAACATCCTCGCTGG-AAATGCTTCATGTCGCGTTAGAAAAACGTCGAGCTCCC-AGCTTACTACCAATTTTGCGATAAA-------AGGGAGCTGCAATGA-ATATGTTCGTGGCGATTGTTAAGAATAAATCGTGSizeHit CountTotal NormTotal
No Reads
droBia1
GCCTTCCCCTATTTATACAACAACATGCCACACTTTGTACATCTGAGCTGGTAAGATTCC------ACATTATTC-----------------------------TGAAATTAT------TAATCTAA--AATCTTATTTACGTGGT-AGTAACGTTTCCAAGTGAATATCCTCGCTGG-AAATGCTTCATGTCGCGTTAGAAAAACGTCGAGCTCCC-AGCTTACTACAAATTTTGCGATAAA-------CGGGAGCTGCAATGA--TATGTTCGTGGCGATTGTTAAGAATAAATCGTGSizeHit CountTotal NormTotal
No Reads
droTak1
GCCTTTCCCTACTTGTACAACAATATGCCGCACTTTGTACATCTAAGCTGGTAAGATTCC------CTATTCTTC-----------------------------AGAAATTAT------TAATCTAA--GATCTTGTTTACGTGGT-AGTAACGTTTCCATGTGAACAGCCTCGCTGG-AAACGCTTCATCACACGTTAGAGAAACGTCGAGCTCCC-----TACTACAAA---TGCGATAAA-------CGGGAGCTGCAATC--CTATGTTCGTGGCGATTGTTAAGAATAAATCGCGSizeHit CountTotal NormTotal
No Reads
droEug1
GCGTTTCCCTACTTGTACAACAATATGCCGCACTTTGTACATCTGAGCTGGTAAGATCTA------TTATTCTCC-----------------------------AAAAATTAT------TAATCTAA--AATCTTATTTACGTGGT-AGTAACGTTTCCAAGTGAACGGCCATGCTGG-AAATGCTTCATGTCGCGTTAGAAAAACGTCGAGCTCCC-AGCTTACTACCAATTTTGCGATAAA-------CGGGAGCTGCAATAA-ATATGTTCGTGGCGATTGTTAAGAATAAATCGTGSizeHit CountTotal NormTotal
No Reads
dm3
GCCTTTCCTTACTTGTACAACAATATGCCACACTTTGTGCATTTGAGCTGGTAAGAGTCC------ACATTCTTC-----------------------------AAAAATTAC------CATTCTAA--AATCTTATTTACGTGGTTAGAAACGTTTCCAAGTGATCAGCCTCTCTGG-AAATGCTTCATGCCGCGTTAGAAAAACGACGAGCTCCC-AGGTTACTGCCAAATTTGCGATAAA------ACGGGAGCTGCAATGA-ATATGTTCGTGGCGATTGTTAAGAATTAATCGTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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.......................TATGCCACACTTTGTGCATTTGAGCTGG.........................................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000101000000
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............................................................................................................................................................................................................................................................................ATGTTCGTGGCGATTGTTAAGAATT.......2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.......................TATGCCACACTTTGTGCATTTGAGC............................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000010000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.........................................................................................................................................TTACGTGGTTAGAAACGTTTCCAAGTGA.......................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...............................................................................................................................................................................................................................................TAAA------ACGGGAGCTGCAATGA-AT................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................AA------ACGGGAGCTGCAATGA-ATAA..............................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............................................................................................................................................................CAAGTGATCAGCCTCTCTGG-A........................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
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.................................................................................................................................................................................................................................................AA------ACGGGAGCTGCAATGA-ATA...............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
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......................................................................................................................................................................................................................CCC-AGGTTACTGCCAAATTTGCGAT............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TAGAAAAACGACGAGCTCCC-AG................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................GTTAGAAAAACGACGAGCT......................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................G-AAATGCTTCATGCCGCGTTAG....................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...................................................................................................................................................................................AAATGCTTCATGCCGCGTTAGAAA.................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TTACTTGTACAACAATATGCCACACTTT........................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AATGCTTCATGCCGCGTT......................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................TCTCTGG-AAATGCTTCATGCCGCGTTA.....................................................................................................2711.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................ACGGGAGCTGCAATGA-ATC...............................1911.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TACTGCCAAATTTGCGATAA..........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CTTTGTGCATTTGAGCTG..........................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................AGTGATCAGCCTCTCTGG-AAATGCT..................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................AAAACGACGAGCTCCC-AGG...............................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................TTAGAAAAACGACGAGCTCCC-AGGTT.............................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................ACGACGAGCTCCC-AGGTT.............................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................CCTCTCTGG-AAATGCTTCATGC............................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................AGAAAAACGACGAGCTCCC-..................................................................................1911.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TTTGTGCATTTGAGCTGGTAAGAGTC.................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
........................................................................................................................................TTTACGTGGTTAGAAACGTTTCT.............................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TACGTGGTTAGAAACGTTTCCAAGTG........................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TTAGAAAAACGACGAGCTCC....................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................G-AAATGCTTCATGCCGCGTTGT....................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................ATGCCGCGTTAGAAAAACGA............................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................GGTTACTGCCAAATTTGCGA.............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................AA------ACGGGAGCTGCAATGA-ATAAA.............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTCGTGGCGATTGTTAAGAATTAATCG..2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................TTTACGTGGTTAGAAACGTTTCA.............................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................TCTGG-AAATGCTTCATGCCGCGTTA.....................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTGTACAACAATATGCCACACTTTGT......................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TTTGCGATAAA------ACGGGAGCTGCAATGA-AT................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TGGCGATTGTTAAGAATTAATCGTG2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AAGTGATCAGCCTCTCTGG-.........................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TACGTGGTTAGAAACGTTTCCAC...........................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TGCAATGA-ATATGTTCGTGGC.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................CCAAGTGATCAGCCTCTCTGG-AA.......................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................CGAGCTCCC-AGGTTACTGCCAAA....................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTCGTGGCGATTGTTAAGAATTAATCGT.2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................TCTGG-AAATGCTTCATGCCGCG........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................................................................................................................A------ACGGGAGCTGCAATGA-ATATGTT...........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................................ATGCCGCGTTAGAAAAACGACGAGCTC.....................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................AATTTGCGATAAA------ACGGGA.............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................G-AAATGCTTCATGCCGCGTTAA....................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................AAACGTTTCCAAGTGATCAGCC.................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................GTGATCAGCCTCTCTGG-A........................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................CTCTCTGG-AAATGCTTCATGC............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GAGCTGCAATGA-ATATGT............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................CGTGGCGATTGTTAAGAATTAATC...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TTTGCGATAAA------ACGGGAGCTGCA.......................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................AAACGTTTCCAAGTGATCAGCCTC...............................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................ACGTTTCCAAGTGATCAGC..................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................GCCTCTCTGG-AAATGCTTCATGCCG..........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................................................................................................................................................ACGTTTCCAAGTGATCAGCCTCTCTGG-.........................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................GGAGCTGCAATGA-ATATG.............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................ATATGTTCGTGGCGATTGTTAAG...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................CGAGCTCCC-AGGTTACTGCCAA.....................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................GATAAA------ACGGGAGCTGCAATGA-AT................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................................................................................................CGGGAGCTGCAATGA-ATATGTTCGT........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ACACTTTGTGCATTTGAGCTGGTATC.....................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................CAAGTGATCAGCCTCTCTGG-AAA......................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...............................................................................................................................................................................................................................ACTGCCAAATTTGCGATAAA------ACGG...............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................TAGAAAAACGACGAGCTCCC-AGG...............................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TCGTGGCGATTGTTAAGAATTAATCG..2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................AAA------ACGGGAGCTGCAATGA-AG................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GCCTTCCCTTACTTGTACAACAATATGCCGCACTTTGTGCATTTGAGCTGGTAAGAACCC------ACATTATTC-----------------------------AAAAATTAC------CATTCTAA--AATCTTATTTACGTGGTTAGAAACGTTTCCAAGTGAACAGCCTCTCTGG-AAATGCTTCATGCCGCGTTAGAAAAACGACGAGCTCCC-AGGTTACTGCCAAATTTGCGATAAA------ACGGGAGCTGCAATGA-ATATGTTCGTGGCGATTGTTAAGAATTAATCGTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................TTTACGTGGTTAGAAAC...................................................................................................................................................1719.00900000001008000000
........................................................................................................................................TTTACGTGGTTAGAAACG..................................................................................................................................................1815.00500000000005000000
....................................................................................................................................................................................AATGCTTCATGCCGCGTT......................................................................................................1813.00300000000003000000
........................................................................................................................................TTTACGTGGTTAGAAACGT.................................................................................................................................................1913.00300000000003000000
........................................................................................................................................TTTACGTGGTTAGAAACGTT................................................................................................................................................2012.00200000000002000000
........................................................................................................................................TTTACGTGGTTAGAAA....................................................................................................................................................1612.00200000000002000000
.................................................................................................................................................................................G-AAATGCTTCATGCCGCGTT......................................................................................................2012.00200000000002000000
..............................................................................................................................................................................................................................................................................GTTCGTGGCGATTGTTAAGA..........2012.00200100000000100000
........................................................................................................................................TTTACGTGGTTAGAAACGTTTCC.............................................................................................................................................2312.00200000000002000000
........................................................................................................................................TTTACGTGGTTAGAAACGTTTC..............................................................................................................................................2211.00100000000001000000
......................................................................................................................................................................................................................................AATTTGCGATAAA------ACGG...............................................1711.00100000010000000000
..............................................................................................................................................................................CTGG-AAATGCTTCATGCCGCGT.......................................................................................................2211.00100000001000000000
........................................................................................................................................TTTACGTGGTTAGAA.....................................................................................................................................................1511.00100000000001000000
..............................................................................................................................................TGGTTAGAAACGTTTCCAAG..........................................................................................................................................2011.00100000000001000000
........................................................................................................................................TTTACGTGGTTAGAAACGTTT...............................................................................................................................................2111.00100000000001000000
...................................................................................................................................................................................AAATGCTTCATGCCGCGTT......................................................................................................1911.00100000000001000000
.........................................................................................................................................................................................................................................................ACGGGAGCTGCAATGA-AT................................1811.00100100000000000000
.............TGTACAACAATATGCCGCACTTTGT......................................................................................................................................................................................................................................................................2511.00100100000000000000
.....................................................................................................................................................................................ATGCTTCATGCCGCGTTAGAA..................................................................................................2111.00100010000000000000
.....................................................................................................................................................................................ATGCTTCATGCCGCGT.......................................................................................................1611.00100000000001000000
.........................................................................................................................................................................................................................................................ACGGGAGCTGCAATGA-ATAT..............................2011.00100100000000000000
.................................................................................................................................................................................................................................TGCCAAATTTGCGATAAA------ACGGGAGC...........................................2611.00100000000001000000
........................................................................................................................................TTTACGTGGTTAGAAACGTTTCCAAA..........................................................................................................................................2611.00100000000000001000
......................................................................................................................................................AACGTTTCCAAGTGAACAGCCTCTCTG...........................................................................................................................2711.00110000000000000000
.............................................................................................................................................................................................................................................GATAAA------ACGGGAGCTGCAATGA-ATAT..............................2611.00100100000000000000
.......................................................................................................................................................................................................................................................................GA-ATATGTTCGTGGCGATT.................1911.00100000010000000000
.............................................................................................................................................................................................................................................GATAAA------ACGGGAGCTGCAATGA-AT................................2411.00100000000000001000
.................................................................................................................................................................................................GCGTTAGAAAAACGA............................................................................................1511.00100000001000000000
.......................................................................................................................................................................................................................................ATTTGCGATAAA------ACGGGG.............................................1811.00100100000000000000
............................................................................................................................................CGTGGTTAGAAACGTTTCCA............................................................................................................................................2011.00100000000001000000
.................................................................................................................................................................................................................................................AA------ACGGGAGCTGCAATGA-AT................................2011.00100000000000100000
...............................................................................................................................................................................................................................................................................TTCGTGGCGATTGTTAAG...........1811.00100000010000000000
.................................................................................................................................................................................................................................................AA------ACGGGAGCTGCAATGA-A.................................1911.00100000001000000000
................................................................................................................................................................................................................................................AAA------ACGGGAGCTGCAATGA-ATAT..............................2311.00100010000000000000
.................................................................................................................................................................GTGAACAGCCTCTCTGG-A........................................................................................................................1811.00100010000000000000
........................................................................................................................................TTTACGTGGTTAGAAACGTTTCCAAGTG........................................................................................................................................2811.00100010000000000000
............................................................................................................................................CGTGGTTAGAAACGT.................................................................................................................................................1511.00100000000001000000
...............................................................................................................................................GGTTAGAAACGTTTCCA............................................................................................................................................1720.50100000000001000000
droSec2
GCCTTCCCTTACTTGTACAACAATATGCCGCACTTTGTGCATTTGAGCTGGTAAGAGCCC------ACATTCTTC-----------------------------GAAAATTAC------CATTCTAA--AATCTTATTTACGTGGTTAGAAACGTTTCCAAGTGAACAGCCTCTCTGG-AAATGCTTCATGCCGCGTTAGAAAAACGACGAGCTCCC-AGGTTACTGCCAAATTTGCGATAAA------ACGGGAGCTGCAATGA-ATATGTTCGTGGCGATTGTTAAGAATTAATCGTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................TTTACGTGGTTAGAAACGTTTCCAAGTG........................................................................................................................................28112.00127500
........................................................................................................................................TTTACGTGGTTAGAAACGTTTCCAAGT.........................................................................................................................................2713.0033000
.........................................................................................................................................TTACGTGGTTAGAAACGTTTCCAAGTG........................................................................................................................................2712.0021010
.............................................................................................................................................................................................................CGACGAGCTCCC-AGGTTACTGCC.......................................................................2312.0020020
.................................................................................................................................................................................................GCGTTAGAAAAACGACGAGCTCC....................................................................................2312.0020020
.................................................................................................................................................................................................GCGTTAGAAAAACGACGAGCTCCC-..................................................................................2412.0020020
.......................................................................................................................................................................AGCCTCTCTGG-AAATGCTTCATGCCGCG........................................................................................................2811.0011000
..................................................................................................................................................................................................................................................A------ACGGGAGCTGCAATGA-AT................................1911.0010010
..................................................................................................................................................TAGAAACGTTTCCAAGTG........................................................................................................................................1811.0010010
....................................................................................................................................................................AACAGCCTCTCTGG-AAATGCTTCATGCC...........................................................................................................2811.0010100
............................................................................................................................................................................................................ACGACGAGCTCCC-AGGTTACTGC........................................................................2311.0010010
............................................................................................................................................................................CTCTGG-AAATGCTTCATGCC...........................................................................................................2011.0010010
........................................................................................................................................................................................................................................TTTGCGATAAA------ACGGGAGCTGC........................................2211.0010010
................................................................................................................................................................AGTGAACAGCCTCTCTGG-AAATGC...................................................................................................................2411.0010010
.................................................................................................................................................................................................GCGTTAGAAAAACGACGAGCTCCC-AG................................................................................2611.0010010
.....................................................................................................................................................................................................................................................................ATGA-ATATGTTCGTGGCGAT..................2011.0011000
..............................................................................................................................................................................................................................................................................GTTCGTGGCGATTGTTAA............1811.0010010
........................................................................................................................................TTTACGTGGTTAGAAACGTTTCC.............................................................................................................................................2311.0010010
....................................................................................................................................................................................AATGCTTCATGCCGCGTTA.....................................................................................................1911.0010001
.................................................................................................................................................................................................GCGTTAGAAAAACGACGAGCTC.....................................................................................2211.0010001
.........................................................................................................................................................................................................AAAACGACGAGCTCCC-AGGTTACTGC........................................................................2611.0010100
...............................................................................................................................................................................TGG-AAATGCTTCATGCCGCGT.......................................................................................................2111.0011000
................................................................................................................................................................................................................CGAGCTCCC-AGGTTACTGCCAAA....................................................................2311.0010100
....................................................................................................................................................................................................................................CAAATTTGCGATAAA------ACGGGAGC...........................................2311.0010010
..........................................................................................................................................................................................................................................................................ATATGTTCGTGGCGATTGTTAAGA..........2411.0010010
....................................................................................................................................................................................................................................................................AATGA-ATATGTTCGTGGCG....................1911.0010010
................................................................................................................................................................................................................................................................CTGCAATGA-ATATGTTCGTGGC.....................2211.0010010
.................................................................................................................................................................................................................................................................TGCAATGA-ATATGTTCGTG.......................1911.0010010
........................................................................................................................................................................................................................................................................A-ATATGTTCGTGGCGATTGTTAAG...........2411.0011000
..........................................................................................................................................TACGTGGTTAGAAACGTTTCCAAGTG........................................................................................................................................2611.0011000
...........................................................................................................................................................................................................AACGACGAGCTCCC-AGGTTACTGC........................................................................2411.0010100
..............................................................................................................................................................................................................GACGAGCTCCC-AGGTTACTGCC.......................................................................2211.0010010
..........................................................................................................................................................................................................AAACGACGAGCTCCC-AGGTTACT..........................................................................2311.0011000
........................................................................................................................................TTTACGTGGTTAGAAACGTTTCCA............................................................................................................................................2411.0010100
droYak3
GCCTTTCCTTACTTGTACAACAATATGCCGCACTTTGTGCATTTGAGCTGGTAAGATCCC------ACATTCCTC-----------------------------CAAAATTAT------TATTCTAA--AATACTATTTACGTGGTCAGAAACGTTTCTAAGTGAACAGCCTCTCTGG-AAATGCTTCATGCCGCGTCAGAAAAACGACGAGCTTCC-AGGATACTGTCAAATTTGCGATAAA-------CGGGAGCTGCAATGA-ATATGTTCGTGGCGATTGTTCAGAATTAATCGTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................TTTACGTGGTCAGAAACGTTTCTAAGTG........................................................................................................................................28110.001002000080000
....................................................................................................................................................GAAACGTTTCTAAGTGAACAGCCTCTCTGG-A........................................................................................................................3115.00500000000005
........................................................................................................................................TTTACGTGGTCAGAAACGTTT...............................................................................................................................................2115.00500000050000
..............................................................................................................................................................................................................................................................................GTTCGTGGCGATTGTTCAGA..........2013.00300000030000
.............................................................................................................................................................CTAAGTGAACAGCCTCTCTGG-A........................................................................................................................2213.00301000020000
................................................................................................................................................................................................................................................AAA-------CGGGAGCTGCAATGA-ATAT..............................2212.00200100010000
.....................................................................................................................................................................................................................TTCC-AGGATACTGTCAAATTTGC...............................................................2312.00200000020000
........................................................................................................................................TTTACGTGGTCAGAAACGTTTCTAA...........................................................................................................................................2512.00201000010000
....................................................................................................................................................................................AATGCTTCATGCCGCGTCAGAAA.................................................................................................2311.00100000010000
.............................................................................................................................................................................................................................................GATAAA-------CGGGAGCTGCAATGA-ATAT..............................2511.00100000010000
........................................................................................................................................TTTACGTGGTCAGAAACGTTTCTAAGT.........................................................................................................................................2711.00100000010000
.....................................................................................................................................................................................................CAGAAAAACGACGAGCTTCC-A.................................................................................2111.00100000010000
....................................................................................................................................................................................................................................................................AATGA-ATATGTTCGTGGCGATT.................2211.00100000010000
............................CGCACTTTGTGCATTTGAGCTGGT........................................................................................................................................................................................................................................................2411.00100000010000
........................................................................................................................................TTTACGTGGTCAGAAACGTTTCTAAGTGA.......................................................................................................................................2911.00100000010000
........................ATGCCGCACTTTGTGCATTTGAGCTGGT........................................................................................................................................................................................................................................................2811.00100000010000
...............................................................................................................................................................................................................................................TAAA-------CGGGAGCTGCAATGA-ATAT..............................2311.00100100000000
...........................................................................................................................................................................................................AACGACGAGCTTCC-AGGAT.............................................................................1911.00100000010000
.............................................................................................................................................................CTAAGTGAACAGCCTCTCTGG-AAA......................................................................................................................2411.00101000000000
.................................................................................................................................................................................................................................................AA-------CGGGAGCTGCAATGA-ATTC..............................2111.00100100000000
.....................................................................................................................................................................................................................................AAATTTGCGATAAA-------CGGGAGCTGCAATG....................................2811.00100000010000
.......................................................................................................................................................................................................................................................................................GATTGTTCAGAATTAATCGT.2011.00100000010000
...............................................................................................................................................................AAGTGAACAGCCTCTCTGG-A........................................................................................................................2011.00100100000000
......................................................................................................................................................AACGTTTCTAAGTGAACAGC..................................................................................................................................2011.00100100000000
.........................................................................................................................................TTACGTGGTCAGAAACGTTTCTAAGTG........................................................................................................................................2711.00100000010000
........................................................................................................................................TTTACGTGGTCAGAAACGTTTCTAAG..........................................................................................................................................2611.00100000010000
....................................................................................................................................................................................AATGCTTCATGCCGCGTCAGAAAAAC..............................................................................................2611.00100000010000
........................................................................................................................................TTTACGTGGTCAGAAACG..................................................................................................................................................1811.00100000010000
....................................................................................................................................................................AACAGCCTCTCTGG-AAATGCTTCATGCC...........................................................................................................2811.00100000010000
.............................................................................................................................................................................................................................................GATAAA-------CGGGAGCTGCAATGA-ATATGTT...........................2811.00100000010000
......................................................................................................................................................AACGTTTCTAAGTGAACAGCCTCTCT............................................................................................................................2611.00100100000000
................................CTTTGTGCATTTGAGCTG..........................................................................................................................................................................................................................................................1811.00100001000000
............................................................................................................................................................TCTAAGTGAACAGCCTCTCTGG-A........................................................................................................................2311.00101000000000
....................................................................................................................................................................................AATGCTTCATGCCGCGTCAGA...................................................................................................2111.00100000010000
.............................................................................................................................................................CTAAGTGAACAGCCTCTCT............................................................................................................................1911.00100100000000
.....................AATATGCCGCACTTTGTGCATTTGAGCTG..........................................................................................................................................................................................................................................................2911.00110000000000
droEre2
GCCTTTCCGTATTTGTACAACAATATGCCGCACTTTGTGCATTTGAGCTGGTAAGATCCC------ACATTCCTC-----------------------------CAATATGAT------TATTCTAA--CATCTTATTTACGTGGTCAAGAACGTTTCCAAGTGAACAGCCTCTCTGG-AAATGCTTCATGCCGCGTTAGAAAAACGACGAGCTCTC-AGGTTACTGCCAAATTTGCGATAAA-------CGGGAGCTGCAATGA-ATATGTTCGTGGCGATTGTTAAGAATTAATCGTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................TTTACGTGGTCAAGAACGTTTCCAAGTG........................................................................................................................................28114.00145300600
.............................................................................................................................................................................................................CGACGAGCTCTC-AGGTTACTGCC.......................................................................2316.0060105000
........................................................................................................................................TTTACGTGGTCAAGAACGTTTCC.............................................................................................................................................2315.0051100120
..............................................................................................................................................................CAAGTGAACAGCCTCTCTGG-A........................................................................................................................2115.0051002020
...........................................................................................................................................................................................................AACGACGAGCTCTC-AGGTTACTGCC.......................................................................2514.0040301000
..............................................................................................................................................................................................................GACGAGCTCTC-AGGTTACTGCC.......................................................................2214.0041201000
........................................................................................................................................TTTACGTGGTCAAGAACGT.................................................................................................................................................1914.0041001110
.................................................................................................................................................................................................GCGTTAGAAAAACGACGAGCTCTC-..................................................................................2414.0044000000
...........................................................................................................................................................................................................AACGACGAGCTCTC-AGGTTACTGC........................................................................2413.0030101100
........................................................................................................................................TTTACGTGGTCAAGAACGTTTC..............................................................................................................................................2213.0031100100
.......................................................................................................................................................................................................................................ATTTGCGATAAA-------CGGGAGC...........................................1913.0030102000
..........................................................................................................................................................................................................AAACGACGAGCTCTC-AGGTTACT..........................................................................2313.0031200000
...............................................................................................................................................................................................................................................................GCTGCAATGA-ATATGTTCGT........................2012.0020200000
...........................................................................................................................................................................................................AACGACGAGCTCTC-AGGTTACTGCCA......................................................................2612.0020101000
.............................................................................................................................................................................................................CGACGAGCTCTC-AGGTTACTGC........................................................................2212.0020200000
..........................................................................................................................................................................................................AAACGACGAGCTCTC-AGGT..............................................................................1912.0020002000
..........................................................................................................................................TACGTGGTCAAGAACGTTTCCAAGTG........................................................................................................................................2612.0021100000
.................................................................................................................................................................................................GCGTTAGAAAAACGACGAGCTCTC-AGGT..............................................................................2812.0021100000
..........................................................................................................................................................................................................AAACGACGAGCTCTC-AGGTTACTGCC.......................................................................2612.0020200000
..............................................................................................................................................................................................................................................................AGCTGCAATGA-ATATGTTCGTGGC.....................2412.0021000010
..............................................................................................................................................................................................................GACGAGCTCTC-AGGTTACTGC........................................................................2112.0020200000
........................................................................................................................................................................GCCTCTCTGG-AAATGCTTCATGCCGC.........................................................................................................2612.0020200000
..............................................................................................................................................................................................................GACGAGCTCTC-AGGTTACTGCCA......................................................................2312.0020200000
........................................................................................................................................TTTACGTGGTCAAGAACGTTTCCAAGT.........................................................................................................................................2712.0020000200
.................................................................................................................................................................................................GCGTTAGAAAAACGACGAGCTCTC-AG................................................................................2612.0020001010
........................................................................................................................................................................................................................................TTTGCGATAAA-------CGGGAGC...........................................1812.0020200000
........................................................................................................................................................................GCCTCTCTGG-AAATGCTTCATGCC...........................................................................................................2412.0020101000
........................................................................................................................................TTTACGTGGTCAAGAACGTTTCCA............................................................................................................................................2412.0020010100
...........................................................................................................................................................................TCTCTGG-AAATGCTTCATGCCGC.........................................................................................................2312.0020002000
................................................................................................................................................GTCAAGAACGTTTCCAAGT.........................................................................................................................................1912.0020000200
................................................................................................................................................................................................................................................AAA-------CGGGAGCTGCAATGA-ATAT..............................2212.0021100000
.........................................................................................................................................................................CCTCTCTGG-AAATGCTTCATGCCGC.........................................................................................................2512.0020200000
............................................................................................................................................................................................................ACGACGAGCTCTC-AGGTTACTGCC.......................................................................2412.0020101000
............................................................................................................................................CGTGGTCAAGAACGTTTCCAAGTG........................................................................................................................................2412.0020002000
.................................................................................................................................................................................................GCGTTAGAAAAACGACGAGCTCTC-AGG...............................................................................2712.0020101000
.............................................................................................................................................................................................................................................GATAAA-------CGGGAGCTGCAATGA-ATAT..............................2512.0020000110
......................................................................................................................................................................CAGCCTCTCTGG-AAATGCT..................................................................................................................1911.0010001000
...............................................................................................................................................................AAGTGAACAGCCTCTCTGG-.........................................................................................................................1911.0011000000
........................................................................................................................................................................................................................................TTTGCGATAAA-------CGGGAGCTGCAAT.....................................2411.0010100000
.........................................................................................................................................................................CCTCTCTGG-AAATGCTTCATGCT...........................................................................................................2311.0010000100
.............................................................................................................................................................................................................CGACGAGCTCTC-AGGTTACT..........................................................................2011.0010100000
....................................................................................................................................................AGAACGTTTCCAAGTGAACAGCCTCTCTG...........................................................................................................................2911.0011000000
............................................................................................................................................................................CTCTGG-AAATGCTTCATGCCGC.........................................................................................................2211.0010100000
.........................................................................................................................................................................CCTCTCTGG-AAATGCTTCATGCC...........................................................................................................2311.0010100000
.................................................................................................................................................................................................................................................AA-------CGGGAGCTGCAATGA-ATATG.............................2211.0011000000
............................................................................................................................................................................CTCTGG-AAATGCTTCATGC............................................................................................................1911.0010100000
....................................................................................................................................................................AACAGCCTCTCTGG-AAATGCTTCATGCC...........................................................................................................2811.0011000000
................................................................................................................................................................................................................................................................CTGCAATGA-ATATGTTCGTGGCGATT.................2611.0011000000
..............................................................................................................................................................................................................................................ATAAA-------CGGGAGCTGCAATGA-AT................................2211.0010000010
....................................................................................................................................................................AACAGCCTCTCTGG-AAATGCT..................................................................................................................2111.0011000000
.................................................................................................................................................................................................GCGTTAGAAAAACGACGAGCTCTC-A.................................................................................2511.0010100000
.............................................................................................................................................................................................................................................GATAAA-------CGGGAGCTGCAATGA-ATATG.............................2611.0010100000
.................................................................................................................................................................GTGAACAGCCTCTCTGG-A........................................................................................................................1811.0010000010
.............................................................................................................................................................................................................................TTACTGCCAAATTTGCGAT............................................................1911.0010100000
....................................................................................................................................................AGAACGTTTCCAAGTGAAC.....................................................................................................................................1911.0010001000
...........................................................................................................................................................................TCTCTGG-AAATGCTTCATGC............................................................................................................2011.0010100000
..............................................................................................................................................TGGTCAAGAACGTTTCCAAGTG........................................................................................................................................2211.0010001000
................................................................................................................................................................................................CGCGTTAGAAAAACGACGAGCTCTC-..................................................................................2511.0011000000
..............................................................................................................................................TGGTCAAGAACGTTTCCAAGTGAAC.....................................................................................................................................2511.0010001000
............................................................................................................................................................................CTCTGG-AAATGCTTCATGCC...........................................................................................................2011.0011000000
.........................................................................................................................................................................................................................................................................................TTGTTAAGAATTAATCGC.1811.0010100000
..............................................................................................................................................................................................................................................................................GTTCGTGGCGATTGTTAAGA..........2011.0010100000
.............................................................................................................................................................................................................................................GATAAA-------CGGGAGCTGCAATG....................................2011.0010100000
...............................................................................................................................................................AAGTGAACAGCCTCTCTGG-A........................................................................................................................2011.0010000100
......................................................................................................................................................................CAGCCTCTCTGG-AAATGCTTCATGC............................................................................................................2511.0010100000
.........................................................................................................................................TTACGTGGTCAAGAACGTTTCCAAGTGA.......................................................................................................................................2811.0011000000
.................................................................................................................................................................................................................................................AA-------CGGGAGCTGCAATGA-ATATGTTCGTG.......................2811.0010100000
.......................................................................................................................................................................AGCCTCTCTGG-AAATGCTTC................................................................................................................2011.0010001000
..........................................................................................................................................................................CTCTCTGG-AAATGCTTCATGCCGCG........................................................................................................2511.0010100000
...........................................................................................................................................................................................................AACGACGAGCTCTC-AGGTTAC...........................................................................2111.0010100000
...............................................................................................................................................................................................................................ACTGCCAAATTTGCGATAAA-------CG................................................2211.0011000000
.....................................................................................................................................................................................................TAGAAAAACGACGAGCTCTC-AGGTTAC...........................................................................2711.0010100000
..........................GCCGCACTTTGTGCATTTGAGCTGGT........................................................................................................................................................................................................................................................2611.0011000000
................................................................................................................................................GTCAAGAACGTTTCCAAGTGA.......................................................................................................................................2111.0010000010
................................................................................................................................................GTCAAGAACGTTTCCAAGTGAACAG...................................................................................................................................2511.0010000010
..........................................................................................................................................................................CTCTCTGG-AAATGCTTCATGCC...........................................................................................................2211.0010100000
.................................................................................................................................................................................................GCGTTAGAAAAACGACGAGCTCC....................................................................................2311.0011000000
.....................................................................................................................................................................................................................................AAATTTGCGATAAA-------CGGGA.............................................1911.0010000010
...........................................................................................................................................................................................................AACGACGAGCTCTC-AGGT..............................................................................1811.0010000010
...................................................................................................................................................................GAACAGCCTCTCTGG-AAATGCT..................................................................................................................2211.0010100000
.................................................................................................................................................................................................GCGTTAGAAAAACGACGAGCTC.....................................................................................2211.0011000000
.........................................................................................................................................................................................................................................TTGCGATAAA-------CGGGAGCTGCAATG....................................2411.0010001000
.........................................................................................................................................................................CCTCTCTGG-AAATGCTTCATGC............................................................................................................2211.0010100000
.................................................................................................................................................................................................GCGTTAGAAAAACGACGA.........................................................................................1811.0011000000
...................................................................................................................................................................................................GTTAGAAAAACGACGAGCTCTC-AGGTT.............................................................................2711.0010100000
............................................................................................................................................................................................................................................................GGAGCTGCAATGA-ATATGTTCGTGGC.....................2611.0010100000
.............................................................................................................................................................................................................................................GATAAA-------CGGGAGCTGCAATGA-AT................................2311.0010000010
............................................................................................................................................................................................................ACGACGAGCTCTC-AGGTTACTGC........................................................................2311.0010000100
...................................................................................................................................................................................................GTTAGAAAAACGACGAGCTCTC-AGGTC.............................................................................2711.0010100000
............................................................................................................................................................................CTCTGG-AAATGCTTCATGCCGCG........................................................................................................2311.0010001000
.........................................................................................................................................TTACGTGGTCAAGAACGTTTCCA............................................................................................................................................2311.0011000000
.......................................................................................................................................................................................................GAAAAACGACGAGCTCTC-AGGTTACTGC........................................................................2811.0010100000
...........................................................................................................................................................................................................AACGACGAGCTCTC-AGGTTACT..........................................................................2211.0010100000
.........................................................................................................................................................................................................AAAACGACGAGCTCTC-AGGTTACTGC........................................................................2611.0010100000
......................................................................................................................................................................................................................................AATTTGCGATAAA-------CGGGAGC...........................................2011.0010000100
....................................................................................................................................................................AACAGCCTCTCTGG-AAATGCTT.................................................................................................................2211.0010100000
................................................................................................................................................................................................................................................................CTGCAATGA-ATATGTTCGTGGCG....................2311.0010001000
........................................................................................................................................TTTACGTGGTCAAGAACGTTTCCAAG..........................................................................................................................................2611.0011000000
..............GTACAACAATATGCCGCACTTT........................................................................................................................................................................................................................................................................2211.0011000000
.................................................................................................................................................................................................GCGTTAGAAAAACGACGAGCTCT....................................................................................2311.0011000000
....................................................................................................................................................................AACAGCCTCTCTGG-AAATGCTTCATGC............................................................................................................2711.0010100000
.......................................................................................................................................................................AGCCTCTCTGG-AAATGCTTCATGCCGC.........................................................................................................2711.0010100000
............................................................................................................................................................................................................................................CGATAAA-------CGGGAGCTGCAATGA-ATA...............................2511.0011000000

Generated: 05/17/2015 at 11:34 PM