ID:

dps_901

 Coordinate:

3:227636-227786 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.4 -23.2 -22.9

Flybase annnotation

CDS [Dpse\GA24585-cds]; exon [dpse_GLEANR_14997:2]; intron [Dpse\GA24585-in]

No Repeatable elements found

mature
  1. Unknown_group_13:77771-77792 +
  2. Unknown_group_98:1549-1570 +
  3. Unknown_group_74:17224-17245 +
  4. Unknown_group_89:19661-19682 +
  5. dps_1906  Unknown_group_258:32413-32434 -
  6. Unknown_group_315:4391-4412 +
  7. Unknown_singleton_576:2123-2144 -
  8. Unknown_group_80:8561-8582 -
  9. Unknown_group_31:12378-12399 -
  10. Unknown_singleton_3066:4210-4231 -
  11. Unknown_group_7:116245-116266 -
  12. Unknown_singleton_2683:2975-2996 +
  13. Unknown_group_25:29197-29218 +
  14. 3:218136-218157 -
  15. dps_901  3:227765-227786 -
  16. 2:25235958-25235979 -
  17. Unknown_singleton_552:1634-1655 -
  18. Unknown_singleton_3068:3256-3277 -
  19. Unknown_singleton_1795:1767-1788 -
  20. Unknown_group_553:2770-2791 +
  21. Unknown_singleton_3065:1830-1851 -
star
  1. Unknown_group_72:24169-24193 -
  2. Unknown_group_469:2236-2260 -
  3. Unknown_singleton_576:2050-2074 -
  4. Unknown_group_362:45100-45124 -
  5. Unknown_group_80:8488-8512 -
  6. Unknown_group_29:15211-15235 -
  7. 3:218063-218087 -
  8. dps_901  3:227692-227716 -
  9. XL_group3a:2623981-2624005 -
  10. Unknown_singleton_552:1561-1585 -
  11. Unknown_group_609:1072-1096 -
  12. Unknown_group_280:5479-5503 +
  13. Unknown_group_70:2202-2226 -
  14. Unknown_singleton_3729:2110-2134 +
  15. Unknown_group_765:5526-5550 -
  16. Unknown_singleton_3439:389-413 +
  17. Unknown_singleton_3068:3183-3207 -
  18. Unknown_singleton_2403:1603-1627 -
  19. Unknown_group_553:2840-2864 +
  20. Unknown_singleton_3134:84-108 -
  21. Unknown_group_98:1619-1643 +
  22. Unknown_group_536:10108-10132 +
  23. Unknown_group_89:19731-19755 +
  24. Unknown_group_53:35771-35795 +
  25. Unknown_group_315:4461-4485 +
  26. Unknown_singleton_576:4450-4474 +
  27. Unknown_group_242:16741-16765 +
  28. Unknown_singleton_2664:5414-5438 +
  29. Unknown_group_115:11282-11306 +
  30. XL_group1a:531222-531246 +
  31. Unknown_group_329:9392-9416 +
  32. Unknown_singleton_1023:1967-1991 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCCATGGAGAGAGGGCCCGCCGACATAGGGACAAGGGCCCGTGCAAACTTTAGTCCAGGAGCCGTGGATTGCGTCAGGCAACTCTGTGGCCGGACTAAAGTCCTCAAATTACAACCTTCTCTACTCAACATCGGTAAGCAGGAACAGAACCGCCGTACTCGTACGGAAGGGAATCCATGCTCATCTTATGTCTCATTACAGCACGGATGACCTGACGGTGGTGATGCTGGAGAGCGAGGAAAAGCGACTAA
**************************************************((((((....((((((((((((.....)))).)))))))).)))))).................(((.((.((((.......)))))).)))...********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 V112
male body		 GSM343916
embryo
 M059
embryo
 GSM444067
head
 M062
head
 SRR902012
CNS imaginal disc
............................................................................................................................................................................................TGTCTCATTACAGCACGGATGAC........................................ 23 0 20 3.75 75 75 0 0 0 0 0 0 0 0
..................................................TAGTCCAGGAGCCGTGGATTGC................................................................................................................................................................................... 22 0 20 3.45 69 68 0 0 0 0 1 0 0 0
........................................................................................................................CTACTCAACATCGGTAAGCAGGAAC.......................................................................................................... 25 0 20 2.05 41 38 2 0 0 0 1 0 0 0
..................................................TAGTCCAGGAGCCGTGGATTGCG.................................................................................................................................................................................. 23 0 20 1.95 39 38 0 1 0 0 0 0 0 0
..................................................TAGTCCAGGAGCCGTGGATTG.................................................................................................................................................................................... 21 0 20 1.30 26 24 0 0 0 2 0 0 0 0
..................................................TAGTCCAGGAGCCGTGGATTGCGT................................................................................................................................................................................. 24 0 20 1.10 22 22 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGATGCTGGAGAGCGAGGAAAAGCGAC... 27 0 4 1.00 4 0 0 4 0 0 0 0 0 0
...........................................................................................................................................................TACTCGTACGGAAGGGAATCCATGC....................................................................... 25 0 16 0.81 13 0 5 6 1 0 1 0 0 0
..................................................TAGTCCAGGAGCCGTGGATTGCGTCAG.............................................................................................................................................................................. 27 0 18 0.50 9 9 0 0 0 0 0 0 0 0
...........................................................................................................................................................TACTCGTACGGAAGGGAATCCATG........................................................................ 24 0 16 0.50 8 6 2 0 0 0 0 0 0 0
........................................................................................................................CTACTCAACATCGGTAAGCAG.............................................................................................................. 21 0 20 0.45 9 0 6 3 0 0 0 0 0 0
........................................................................................................................CTACTCAACATCGGTAAGCA............................................................................................................... 20 0 20 0.45 9 8 1 0 0 0 0 0 0 0
.........................................................................................................................................................CGTACTCGTACGGAAGGGAATCC........................................................................... 23 0 19 0.42 8 8 0 0 0 0 0 0 0 0
.....................................................................TGCGTCAGGCAACTCTGTGGCC................................................................................................................................................................ 22 0 12 0.42 5 2 3 0 0 0 0 0 0 0
..................................................TAGTCCAGGAGCCGTGGATTGCGTC................................................................................................................................................................................ 25 0 20 0.40 8 6 1 0 1 0 0 0 0 0
..................................................TAGTCCGGGAGCCGTGGATTGTG.................................................................................................................................................................................. 23 2 20 0.40 8 8 0 0 0 0 0 0 0 0
..................................................TAGTCCGGGAGCCGTGGATTGTGT................................................................................................................................................................................. 24 2 20 0.40 8 8 0 0 0 0 0 0 0 0
...................................................AGTCCAGGAGCCGTGGATTGC................................................................................................................................................................................... 21 0 20 0.40 8 7 0 0 0 0 0 1 0 0
....................................................................................TGTGGCCGGACTAAAGTCCTCAAAT.............................................................................................................................................. 25 0 11 0.36 4 2 2 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGGTGATGCTGGAGAGCGAGGAA.......... 23 0 14 0.36 5 5 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGATGCTGGAGAGCGAGGAAAAG....... 23 0 20 0.35 7 7 0 0 0 0 0 0 0 0
.........................................................................................................................................................CGTACTCGTACGGAAGGGAATCCA.......................................................................... 24 0 19 0.32 6 6 0 0 0 0 0 0 0 0
...................................................AGTCCAGGAGCCGTGGATTGCG.................................................................................................................................................................................. 22 0 20 0.30 6 6 0 0 0 0 0 0 0 0
...................................................AGTCCAGGAGCCGTGGATTG.................................................................................................................................................................................... 20 0 20 0.30 6 6 0 0 0 0 0 0 0 0
..................................................TAGTCCAGGAGCCGTGGA....................................................................................................................................................................................... 18 0 20 0.30 6 6 0 0 0 0 0 0 0 0
.........................................................................................................................TACTCAACATCGGTAAGCAGGAACA......................................................................................................... 25 0 20 0.30 6 6 0 0 0 0 0 0 0 0
..................................................TAGTCCGGGAGCCGTGGATTG.................................................................................................................................................................................... 21 1 20 0.30 6 6 0 0 0 0 0 0 0 0
........................................................................................................................CTACTCAACATCGGTAAGCAGGAA........................................................................................................... 24 0 20 0.25 5 0 0 4 1 0 0 0 0 0
........................................................................................................................CTACTCAACATCGGTAAGCAGG............................................................................................................. 22 0 20 0.25 5 0 0 0 5 0 0 0 0 0
..............................................................................................................................AACATCGGTAAGCAGGAACAGAACC.................................................................................................... 25 0 20 0.25 5 0 0 4 0 0 0 0 0 1
.............................................................................................................................................................................................GTCTCATTACAGCACGGATGA......................................... 21 0 20 0.25 5 5 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................GTCTCATTACAGCACGGATGAC........................................ 22 0 20 0.25 5 5 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CACGGATGACCTGACGGTGG.............................. 20 0 13 0.23 3 0 3 0 0 0 0 0 0 0
................................................................TGGATTGCGTCAGGCAACTCTG..................................................................................................................................................................... 22 0 13 0.23 3 0 3 0 0 0 0 0 0 0
........................................................................................GCCGGACTAAAGTCCTCAAATTAC........................................................................................................................................... 24 0 14 0.21 3 0 3 0 0 0 0 0 0 0
.............................................................................................................................................................................................GTCTCATTACAGCACGGATG.......................................... 20 0 20 0.20 4 4 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TTTCTCATTACAGCACGGATGA......................................... 22 1 20 0.20 4 4 0 0 0 0 0 0 0 0
..................................................TAGTCCAGGAGCCGTGGAT...................................................................................................................................................................................... 19 0 20 0.20 4 4 0 0 0 0 0 0 0 0
..........................................................................................................................................CAGGAACAGAACCGCCGTACTCG.......................................................................................... 23 0 20 0.20 4 4 0 0 0 0 0 0 0 0
...................................................AGTCCAGGAGCCGTGGATTGCGT................................................................................................................................................................................. 23 0 20 0.20 4 4 0 0 0 0 0 0 0 0
.....................................................................TGCGTCAGGCAACTCTGTGGCCGGAC............................................................................................................................................................ 26 0 11 0.18 2 2 0 0 0 0 0 0 0 0
..................................................TAGTCCAGGAGCCGTGGATTGCGTCA............................................................................................................................................................................... 26 0 18 0.17 3 3 0 0 0 0 0 0 0 0
......................................................................GCGTCAGGCAACTCTGTGGC................................................................................................................................................................. 20 0 12 0.17 2 1 0 0 0 1 0 0 0 0
.....................................................................TGCGTCAGGCAACTCTGTGGC................................................................................................................................................................. 21 0 12 0.17 2 1 1 0 0 0 0 0 0 0
......................................................................GCGTCAGGCAACTCTGTGGCCGG.............................................................................................................................................................. 23 0 12 0.17 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................TACTCGTACGGAAGGGAATCC........................................................................... 21 0 19 0.16 3 3 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TTACAGCACGGATGACCTGACGGTGG.............................. 26 0 13 0.15 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................CTGTCTCATTACAGCACGGATGA......................................... 23 1 20 0.15 3 3 0 0 0 0 0 0 0 0
.........................................................................................................................TACTCAACATCGGTAAGCAGGAA........................................................................................................... 23 0 20 0.15 3 3 0 0 0 0 0 0 0 0
...........................................................................................................................................AGGAACAGAACCGCCGTACTCG.......................................................................................... 22 0 20 0.15 3 3 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGATGCTGGAGAGCGAGGAAAAGCG..... 25 0 20 0.15 3 2 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGATGCTGGAGAGCGAGGAAAAGC...... 24 0 20 0.15 3 2 0 1 0 0 0 0 0 0
..................................................TAGTCCGGGAGCCGTGGATTGTGTC................................................................................................................................................................................ 25 2 20 0.15 3 3 0 0 0 0 0 0 0 0
......................................................................................................................CTCTACTCAACATCGGTAAGC................................................................................................................ 21 0 20 0.15 3 3 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGGTGATGCTGGAGAGCGAGGAAAAG....... 26 0 14 0.14 2 2 0 0 0 0 0 0 0 0
..........................................................GAGCCGTGGATTGCGTCAGGCAACT........................................................................................................................................................................ 25 0 16 0.13 2 2 0 0 0 0 0 0 0 0
..........................................................................................................................................................GTACTCGTACGGAAGGGAATCCATGC....................................................................... 26 0 16 0.13 2 0 2 0 0 0 0 0 0 0
..................................................TAGTCCAGGAGCCGTGGATTGCGTCAGG............................................................................................................................................................................. 28 0 18 0.11 2 2 0 0 0 0 0 0 0 0
....................................................GTCCAGGAGCCGTGGATTGCGTCA............................................................................................................................................................................... 24 0 19 0.11 2 2 0 0 0 0 0 0 0 0
........................................................................................................................CTACTCAACATCGGTAAGCAGGAACA......................................................................................................... 26 0 20 0.10 2 0 2 0 0 0 0 0 0 0
........................................................................................................................CTACTCAACATCGGTAAGCAGGAACAG........................................................................................................ 27 0 20 0.10 2 0 0 0 1 1 0 0 0 0
..........................................................................................................................................CAGGAACAGAACCGCCGTACTCGTA........................................................................................ 25 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..................................................TAGTCCAGGAGCCGTGGATTGCC.................................................................................................................................................................................. 23 1 20 0.10 2 2 0 0 0 0 0 0 0 0
..................................................TAGTCCAGGAGCCGTGGATA..................................................................................................................................................................................... 20 1 20 0.10 2 2 0 0 0 0 0 0 0 0
..........................................................................CAGGCAACTCTGTGGCCGGACTAAAG....................................................................................................................................................... 26 0 10 0.10 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................TATTTCTCATTACAGCACGGATGACC....................................... 26 1 20 0.10 2 2 0 0 0 0 0 0 0 0
................................................................................................AAAGTCCTCAAATTACAACC....................................................................................................................................... 20 0 10 0.10 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................TAAGCAGGAACAGAACCGCCGTACTCG.......................................................................................... 27 0 20 0.10 2 2 0 0 0 0 0 0 0 0
........................................................................................................................................................................................CTTATGTCTCATTACAGCACGG............................................. 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..................................................................................................................................................................ACGGAAGGGAATCCATGCTCATCT................................................................. 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
....................................................................................................................TTCTCTACTCAACATCGGTAAGCA............................................................................................................... 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..........................................................................................................................................CAGGAACAGAACCGCCG................................................................................................ 17 0 20 0.10 2 0 2 0 0 0 0 0 0 0
.........................................................................................................................................GCAGGAACAGAACCGCCGTAC............................................................................................. 21 0 20 0.10 2 1 0 1 0 0 0 0 0 0
.........................................................................TCAGGCAACTCTGTGGCCGGACTAAAG....................................................................................................................................................... 27 0 10 0.10 1 0 0 1 0 0 0 0 0 0
..................................................TAGTCCAGGAGCCGTGGATTGCA.................................................................................................................................................................................. 23 1 20 0.10 2 2 0 0 0 0 0 0 0 0
.................................................................................................................................................................TACGGAAGGGAATCCATGCTCATCTT................................................................ 26 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.............................................................................................................................CAACATCGGTAAGCAGGAAC.......................................................................................................... 20 0 20 0.10 2 1 0 1 0 0 0 0 0 0
...................................................AGTCCGGGAGCCGTGGATTGTGT................................................................................................................................................................................. 23 2 20 0.10 2 2 0 0 0 0 0 0 0 0
.................................................................................................................................................................TACGGAAGGGAATCCATGCTCATC.................................................................. 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TACAGCACGGATGACCTGACGG................................. 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................AGCACGGATGACCTGACGGTGGTG............................ 24 0 10 0.10 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TGTCTCATTACAGCACGGATGACCTGA.................................... 27 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.....................................................................................................................TCTCTACTCAACATCGGTAAGCAGG............................................................................................................. 25 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGATGCTGGAGAGCGAGGAAAA........ 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..........................................................................................................................................CAGGAACAGAACCGCCGTACTC........................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0
......................................................................................................................CTCTACTCAACATCGGTAAGCAGGA............................................................................................................ 25 0 20 0.10 2 2 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TGTCTCATTACAGCACGGATGACC....................................... 24 0 20 0.10 2 0 0 0 2 0 0 0 0 0
..................................................TAGTCCGGGAGCCGTGGATT..................................................................................................................................................................................... 20 1 20 0.10 2 2 0 0 0 0 0 0 0 0
...........................................................................AGGCAACTCTGTGGCCGGAC............................................................................................................................................................ 20 0 11 0.09 1 1 0 0 0 0 0 0 0 0
......................................................................GCGTCAGGCAACTCTGTGGCCGGAC............................................................................................................................................................ 25 0 11 0.09 1 1 0 0 0 0 0 0 0 0
.........................................................................TCAGGCAACTCTGTGGCCGGAC............................................................................................................................................................ 22 0 11 0.09 1 1 0 0 0 0 0 0 0 0
.............................................................................GCAACTCTGTGGCCGGACTAAAGTCCTCA................................................................................................................................................. 29 0 11 0.09 1 0 0 0 0 0 1 0 0 0
...........................................................................AGGCAACTCTGTGGCCGGACTA.......................................................................................................................................................... 22 0 11 0.09 1 0 1 0 0 0 0 0 0 0
....................................................................................TGTGGCCGGACTAAAGTCCTCAAATTAA........................................................................................................................................... 28 1 11 0.09 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CCTGACGGTGGTGATGCTGGA.................... 21 0 12 0.08 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CCTGACGGTGGTGATGCTGG..................... 20 0 12 0.08 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGACCTGACGGTGGTGATGCTGGAG................... 25 0 12 0.08 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CTGACGGTGGTGATGCTGGA.................... 20 0 12 0.08 1 1 0 0 0 0 0 0 0 0
......................................................................GCGTCAGGCAACTCTGTGGCC................................................................................................................................................................ 21 0 12 0.08 1 1 0 0 0 0 0 0 0 0
..................................................................GATTGCGTCAGGCAACTCTGTGG.................................................................................................................................................................. 23 0 13 0.08 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................ATGACCTGACGGTGGTGATG......................... 20 0 13 0.08 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CATTACAGCACGGATGACCTGACGGTGG.............................. 28 0 13 0.08 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CGGTGGTGATGCTGGAGAGC................ 20 0 13 0.08 1 1 0 0 0 0 0 0 0 0
..................................................................GATTGCGTCAGGCAACTCTGTG................................................................................................................................................................... 22 0 13 0.08 1 1 0 0 0 0 0 0 0 0
................................................................TGGATTGCGTCAGGCAACTCTGTGG.................................................................................................................................................................. 25 0 13 0.08 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TGACGGTGGTGATGCTGGAGAGCGAA............. 26 1 13 0.08 1 0 0 0 1 0 0 0 0 0
...................................................................ATTGCGTCAGGCAACTCTGTGG.................................................................................................................................................................. 22 0 13 0.08 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TACAGCACGGATGACCTGACGGTGGT............................. 26 0 13 0.08 1 1 0 0 0 0 0 0 0 0
......................................................................GCGTCAGGCAACTCTGTGG.................................................................................................................................................................. 19 0 13 0.08 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................CACGGATGACCTGACGGTG............................... 19 0 13 0.08 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGGTGATGCTGGAGAGCGAGG............ 21 0 14 0.07 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGGTGATGCTGGAGAGCGAGGAAA......... 24 0 14 0.07 1 1 0 0 0 0 0 0 0 0
..................................................................................TCTGTGGCCGGACTAAAGTCCTCAA................................................................................................................................................ 25 0 14 0.07 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................GGTGATGCTGGAGAGCGAGGA........... 21 0 14 0.07 1 1 0 0 0 0 0 0 0 0
......................................................................CCGTCAGGCAACTCTGTGGA................................................................................................................................................................. 20 2 15 0.07 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................CGTACTCGTACGGAAGGGAATCCATGC....................................................................... 27 0 16 0.06 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................ACTCGTACGGAAGGGAATCCATGC....................................................................... 24 0 16 0.06 1 1 0 0 0 0 0 0 0 0
..........................................................GAGCCGTGGATTGCGTCAGGCAACTC....................................................................................................................................................................... 26 0 16 0.06 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................TACTCGTACGGAAGGGAATCCAT......................................................................... 23 0 17 0.06 1 1 0 0 0 0 0 0 0 0
.............................................................CCGTGGATTGCGTCAGGCAACTC....................................................................................................................................................................... 23 0 18 0.06 1 1 0 0 0 0 0 0 0 0
..................................................TAGTCCGGGAGCCGTGGATTGTGTCA............................................................................................................................................................................... 26 2 18 0.06 1 1 0 0 0 0 0 0 0 0
..................................................TAGTCCGGGAGCCGTGGATTGTGTCAG.............................................................................................................................................................................. 27 2 18 0.06 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................TCGTACGGAAGGGAATCCATGC....................................................................... 22 0 18 0.06 1 1 0 0 0 0 0 0 0 0
.....................................................TCCAGGAGCCGTGGATTGCGTCAGGC............................................................................................................................................................................ 26 0 18 0.06 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................TCGTACGGAAGGGAATCCATG........................................................................ 21 0 18 0.06 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................CGTACCCGTACGGAAGGGAATCC........................................................................... 23 1 19 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................CTCTACTCAACATCGGTAAGCAGGAACA......................................................................................................... 28 0 19 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................CGTACTCGTACGGAAGGGAAT............................................................................. 21 0 19 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................TACTCGTACGGAAGGGAAT............................................................................. 19 0 19 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................TACTCGTACGGAAGGGAATC............................................................................ 20 0 19 0.05 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................GTACTCGTACGGAAGGGAATCC........................................................................... 22 0 19 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................CGCCGTACTCGTACGGAAGGGA............................................................................... 22 0 19 0.05 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................ACCGCCGTACTCGTACGGAAGGGA............................................................................... 24 0 19 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................CGTACTCGTACGGAAGGGAATC............................................................................ 22 0 19 0.05 1 1 0 0 0 0 0 0 0 0
...................................................AGTCCAGGAGCCGTGGATTGCGTCAG.............................................................................................................................................................................. 26 0 19 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................TACTCGTACGGAAGGGAATA............................................................................ 20 1 19 0.05 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................TACTCGTACGGAAGGGAATCCA.......................................................................... 22 0 19 0.05 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................TCGTACGGAAGGGAATCCATC........................................................................ 21 1 19 0.05 1 0 0 0 1 0 0 0 0 0
..........................................................................................................................................CAGGAACAGAGCCGCCGTACTCG.......................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................AGCAGAAACAGAGCCGCCGTACT............................................................................................ 23 2 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................CTACTCGACATCGGTAAGCAGGAA........................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..................................................TAGTCCAGCAGCCGTAGATTGCG.................................................................................................................................................................................. 23 2 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................CTCTACTCAACATCGGTAAGCA............................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................TCTACTCAACATCGGTAAGCAGGAACA......................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TGGAGAGCGAGGAAAAGC...... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................CTACTCAACATCGGTAAGCTGGAAC.......................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................GTCCGGGAGCCGTGGATTGTGT................................................................................................................................................................................. 22 2 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TGTCTCATTACAGCACGGATGAT........................................ 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................ATGCTGGACAGCGAGGAAAAGC...... 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................ATCGGTAAGCAGGAACAGAACCGCC................................................................................................. 25 0 20 0.05 1 0 1 0 0 0 0 0 0 0
....................................................GTCCAGGAGCCGTGGATTGCGT................................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................TACTCGGACGGAAGGGAATCTT.......................................................................... 22 3 20 0.05 1 0 0 0 0 1 0 0 0 0
..................................................TAGTCCAGGAGCCGTGGATT..................................................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................TAAGCAGGAACAGAACCGCCGTAC............................................................................................. 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................GCAGGAACAGAACCGCCG................................................................................................ 18 0 20 0.05 1 0 1 0 0 0 0 0 0 0
..................................................TAGTCCAGGAGCCGTGGATTGA................................................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................CCTACTCAACATGGGTAAGCAGGA............................................................................................................ 24 2 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................AGCAGGAACAGAACCGCCGTAC............................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................CAGGAACAGAACCGCCGTACTCGTACGG..................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................CTACTCAACATCGGTAAGCTGGAACA......................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................................TCAACATCGGTAAGCAGGAACAG........................................................................................................ 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TGTCTCATTACAGCACGGATGA......................................... 22 0 20 0.05 1 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................TGATGCTGGAGAGCGAGGAAA......... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................CAGGAACAGAACCGCCGTAC............................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..................................................TAGTCCGGGAGCCGTGGA....................................................................................................................................................................................... 18 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..................................................TAGTCCAGGAGCCGTGGATTGTGT................................................................................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................AAGCAGGAACAGAACCGCCGTACTCG.......................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................CAGGAACAGAACCGCCGTACTCGTACG...................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................GCTACTCAACATCGGTAAGCAGGAAC.......................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................AGTCCAGGAGCCGTGGATTGCGTT................................................................................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TTACAGCACGGATGACCTGACGGT................................ 24 0 20 0.05 1 0 0 0 1 0 0 0 0 0
..................................................TAGTCCAGGAGCCGTGGATTGCGTT................................................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................TCTACTCAACATCGGTAAGCAGGAAC.......................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................TACTGAAGGGAATCCATGCTCATCT................................................................. 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TTACAACACGGATGACCTGACG.................................. 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................CGTACTCGTACGGAAGGGAAAAAA.......................................................................... 24 3 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................AGGAACAGAACCGCCGTACTCGTACG...................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................TACTCAACATCGGTAAGCAGGAAAA......................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................ACTCAACATCGGTAAGCAGGAA........................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................................................................................TTCTCTACTCAACATCGGTAAGCAGGA............................................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................CTACTCAACATCGGTACGCAGGAA........................................................................................................... 24 1 20 0.05 1 0 0 1 0 0 0 0 0 0
.............................................................................................................................CAACATCGGTAAGCAGGAACAGAACCGC.................................................................................................. 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..................................................TAGTCCGGGAGCCGTGGATA..................................................................................................................................................................................... 20 2 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................ACTGTTGTGATGCTGGAGAGCGA.............. 23 2 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................AGGAACAGAACCGCCGTACTCGTAC....................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................CGGTAAGCAGGAACAGAACCGCCG................................................................................................ 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................CTACTCAACACCGGTAAGCAGGAACA......................................................................................................... 26 1 20 0.05 1 0 0 0 0 0 0 1 0 0
............................................................................................................................................................................ATCCATGCTCATCTTATGTC........................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..................................................TAGTCCGGGAGCCGTGGATTGT................................................................................................................................................................................... 22 2 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................ATGCTGGAGAGCGAGGAAAAGC...... 22 0 20 0.05 1 0 1 0 0 0 0 0 0 0
........................................................................................................................CTACTCAACATCGGTAAGCACG............................................................................................................. 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................................................................................GTGTCTACTCAACATCGGTAAGCAG.............................................................................................................. 25 2 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................TACTCGTACGGAAGGGAAA............................................................................. 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................GCTCGATACCGAGGAAAAG....... 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................TCCAGGAGCCGTGGATTGCGT................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................CGTACGGAAGGGAATCCATGC....................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................ATACTCAACATCGGTAAGCAGGAACA......................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TGGAGAGCGAGTAAAAGCTGCT.. 22 3 20 0.05 1 0 0 0 0 1 0 0 0 0
............................................................................................................................................GGAACAGAACCGCCGTACTCGTA........................................................................................ 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................CGTCTCATTACAGCACGGATG.......................................... 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.................................................ATAGTCCGGGAGCCGTGGATTG.................................................................................................................................................................................... 22 2 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................CTCATTACAGCACGGATGACC....................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................................................................................GCTGGAGAGCGAGGAAAAGC...... 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................GTACGGAAGGGAATCCAT......................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.................................................CTAGTCCAGGAGCCGTGGATTGCGT................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................GGAACAGAACCGCCGTACTC........................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TTATGTCTCATTACAGCACGG............................................. 21 0 20 0.05 1 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................ATGCTGGAGAGCGAGGAA.......... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................CCAGCAGCCGTAGATTGCGTCAGG............................................................................................................................................................................. 24 2 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................CAGCACGGATGACCTGACGG................................. 20 0 20 0.05 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................TACTCAACATCGGTAAGCTGGAAC.......................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................AGTCCAGGAGCCGCGGATTGCGT................................................................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................GTACTCGTACGGAAGGGAA.............................................................................. 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................CGTACTCGTACGGAAGGG................................................................................ 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................ACATCGGTAAGCAGGAACAGAACC.................................................................................................... 24 0 20 0.05 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................CTTACAGCACGGATGACCTGACG.................................. 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TTTCTCATTACAGCACGGATGAC........................................ 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................CTTATGTCTCATTACAGCACGGA............................................ 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TGTCTCATTACAGCACGGATGACCTT..................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................AGTCCAGGAGCCGTGGATTGA................................................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................AGGAGCCGTGGATTGCGTCAGG............................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................AGGAACAGAACCGCCG................................................................................................ 16 0 20 0.05 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGATGCTGGAGAGCGAGGAGAAGC...... 24 1 20 0.05 1 0 1 0 0 0 0 0 0 0
......................................................CCAGGAGCCGTGGATTGCGTC................................................................................................................................................................................ 21 0 20 0.05 1 0 0 0 1 0 0 0 0 0
.................................................TTAGTCCAGGAGCCGTGGA....................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TGTCTTATTACAGCACGGATGACC....................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................CTACTCAACATCGGTATGCAGG............................................................................................................. 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................TCTCTACTCAACATCGGTAAGCAG.............................................................................................................. 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TTACAGCACGGATGACCTGAC................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TGTCTCATTACAGCACGGATGATC....................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................CTCTACTCAAAATCGGTAAGAAGGAACA......................................................................................................... 28 2 20 0.05 1 0 0 0 0 0 1 0 0 0
........................................................................................................................CTACTCAACATCGGTAAGCGGGAA........................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................CTACTCGACATCGGTAAGCAGGAAC.......................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................CTACTCAACATCGGTAAGCAGGAC........................................................................................................... 24 1 20 0.05 1 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................................................................GATGCTGGAGAGCGAGGAAAAG....... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

CGGTACCTCTCTCCCGGGCGGCTGTATCCCTGTTCCCGGGCACGTTTGAAATCAGGTCCTCGGCACCTAACGCAGTCCGTTGAGACACCGGCCTGATTTCAGGAGTTTAATGTTGGAAGAGATGAGTTGTAGCCATTCGTCCTTGTCTTGGCGGCATGAGCATGCCTTCCCTTAGGTACGAGTAGAATACAGAGTAATGTCGTGCCTACTGGACTGCCACCACTACGACCTCTCGCTCCTTTTCGCTGATT
**********************************************************************************************************((((((....((((((((((((.....)))).)))))))).)))))).................(((.((.((((.......)))))).)))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 SRR902010
ovaries
 M059
embryo
 V112
male body		 GSM343916
embryo
 M022
male body		 GSM444067
head
 M062
head
..........................................................................................................................................GTCCTTGTCTTGGCGGCATGAGCAT........................................................................................ 25 0 20 21.85 437 430 0 0 1 6 0 0 0 0
.........................................................................................................................................CGTCCTTGTCTTGGCGGCATGAGCAT........................................................................................ 26 0 20 19.70 394 368 0 0 22 4 0 0 0 0
....................................CGGGCACGTTTGAAATCAGGTCCT............................................................................................................................................................................................... 24 0 1 19.00 19 3 10 6 0 0 0 0 0 0
............................................................................................................................................CCTTGTCTTGGCGGCATGAGCAT........................................................................................ 23 0 20 9.35 187 177 0 0 9 1 0 0 0 0
.............................................................................................................................................CTTGTCTTGGCGGCATGAGCAT........................................................................................ 22 0 20 8.35 167 161 0 0 4 2 0 0 0 0
...........................................................................................................................................TCCTTGTCTTGGCGGCATGAGCAT........................................................................................ 24 0 20 8.35 167 153 0 0 9 5 0 0 0 0
......................................GGCACGTTTGAAATCAGGTCCT............................................................................................................................................................................................... 22 0 1 8.00 8 0 8 0 0 0 0 0 0 0
.....................................GGGCACGTTTGAAATCAGGTCCT............................................................................................................................................................................................... 23 0 1 7.00 7 1 4 2 0 0 0 0 0 0
..........................................................................................................TTAATGTTGGAAGAGATGAGTTGT......................................................................................................................... 24 0 6 6.17 37 14 13 0 0 9 0 1 0 0
..............................................................................................................................................TTGTCTTGGCGGCATGAGCAT........................................................................................ 21 0 20 4.85 97 91 0 0 4 1 0 0 0 1
..................................CCCGGGCACGTTTGAAATCAGGTCCT............................................................................................................................................................................................... 26 0 1 4.00 4 4 0 0 0 0 0 0 0 0
.....................................................................ACGCAGTCCGTTGAGACACCGGCCT............................................................................................................................................................. 25 0 11 3.55 39 39 0 0 0 0 0 0 0 0
.........................................................................AGTCCGTTGAGACACCGGCCTGATT......................................................................................................................................................... 25 0 10 3.20 32 18 1 8 1 0 4 0 0 0
.......................................................................................................................................................................................AGAATACAGAGTAATGTCGTGCCTAC.......................................... 26 0 20 3.05 61 37 0 23 1 0 0 0 0 0
...................................CCGGGCACGTTTGAAATCAGGTCCT............................................................................................................................................................................................... 25 0 1 3.00 3 0 2 1 0 0 0 0 0 0
................................TTCCCGGGCACGTTTGAAATCAGGTCCT............................................................................................................................................................................................... 28 0 1 3.00 3 3 0 0 0 0 0 0 0 0
...............................................................................................................................................TGTCTTGGCGGCATGAGCAT........................................................................................ 20 0 20 2.90 58 57 0 0 1 0 0 0 0 0
..........................................................................GTCCGTTGAGACACCGGCCTGATT......................................................................................................................................................... 24 0 10 2.90 29 24 0 0 3 1 1 0 0 0
....................................................................AACGCAGTCCGTTGAGACACCGGCCT............................................................................................................................................................. 26 0 11 2.64 29 28 0 1 0 0 0 0 0 0
.........................................................................AGTCCGTTGAGACACCGGCCTGAT.......................................................................................................................................................... 24 0 11 2.45 27 20 0 2 1 0 4 0 0 0
........................................................................................................................................TCGTCCTTGTCTTGGCGGCATGAGCAT........................................................................................ 27 0 20 2.45 49 49 0 0 0 0 0 0 0 0
......................................................................CGCAGTCCGTTGAGACACCGGCCT............................................................................................................................................................. 24 0 11 2.18 24 23 0 0 1 0 0 0 0 0
.......................................................................GCAGTCCGTTGAGACACCGGCCT............................................................................................................................................................. 23 0 11 2.18 24 24 0 0 0 0 0 0 0 0
................................................................................................................................................GTCTTGGCGGCATGAGCAT........................................................................................ 19 0 20 2.05 41 40 0 0 0 0 1 0 0 0
.........TCTCCCGGGCGGCTGTATCCCT............................................................................................................................................................................................................................ 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.................................TCCCGGGCACGTTTGAAATCAGGTCCT............................................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0
............................................................................................................................................................................TAGGTACGAGTAGAATACAGAGTAAT..................................................... 26 0 20 1.90 38 22 9 4 0 3 0 0 0 0
...........................................................................................................TAATGTTGGAAGAGATGAGTTGT......................................................................................................................... 23 0 6 1.83 11 7 0 3 0 0 0 1 0 0
..............................................................................................................................................................................GGTACGAGTAGAATACAGAGTAAT..................................................... 24 0 20 1.65 33 25 5 2 0 0 1 0 0 0
.........................................................................................................................................CGTCCTTGTCTTGGCGGCATGAGCA......................................................................................... 25 0 20 1.55 31 31 0 0 0 0 0 0 0 0
..........................................................................................................................TGAGTTGTAGCCATTCGTCCTTGTCT....................................................................................................... 26 0 20 1.50 30 29 0 0 0 1 0 0 0 0
..................................................................CTAACGCAGTCCGTTGAGACACCGGCCT............................................................................................................................................................. 28 0 11 1.45 16 11 0 1 4 0 0 0 0 0
......................................................................................................................................................................................................GTCGTGCCTACTGGACTGCCACCACT........................... 26 0 10 1.40 14 12 0 0 2 0 0 0 0 0
..........................................................................................................................................GTCCTTGTCTTGGCGGCATGAGCA......................................................................................... 24 0 20 1.35 27 27 0 0 0 0 0 0 0 0
..................................................................................................................GGAAGAGATGAGTTGTAGCCAT................................................................................................................... 22 0 16 1.31 21 18 1 2 0 0 0 0 0 0
..................................................................................................................................................................................CGAGTAGAATACAGAGTAATGTCGT................................................ 25 0 20 1.25 25 7 14 1 0 3 0 0 0 0
.............................................................................................................................................................................AGGTACGAGTAGAATACAGAGTAAT..................................................... 25 0 20 1.25 25 0 11 12 0 0 1 0 1 0
..........................................................................GTCCGTTGAGACACCGGCCTGAT.......................................................................................................................................................... 23 0 11 1.18 13 12 0 0 1 0 0 0 0 0
.............................................................GGCACCTAACGCAGTCCGT........................................................................................................................................................................... 19 0 20 1.15 23 23 0 0 0 0 0 0 0 0
...........................................................................................................................GAGTTGTAGCCATTCGTCCTTGTCT....................................................................................................... 25 0 20 1.15 23 22 0 0 0 1 0 0 0 0
..........................................................CTCGGCACCTAACGCAGTCCGT........................................................................................................................................................................... 22 0 17 1.06 18 16 0 0 1 0 1 0 0 0
.......................................................................................................................................................................................AGAATACAGAGTAATGTCGTGCCT............................................ 24 0 20 1.05 21 9 1 11 0 0 0 0 0 0
............................................................................................................................................................................................ACAGAGTAATGTCGTGCCTACTGGACT.................................... 27 0 20 1.05 21 12 0 9 0 0 0 0 0 0
...................................CCGGGCACGTTTGAAATCAGGTCCTC.............................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....ACCTCTCTCCCGGGCGGCTGTATCCCT............................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................CCCGGGCACGTTTGAAATCAGGTCC................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................CCCGGGCACGTTTGAAATCAGGTCCTC.............................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................GGGCACGTTTGAAATCAGGTCCTC.............................................................................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.......................................GCACGTTTGAAATCAGGTT................................................................................................................................................................................................. 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................CACGTTTGAAATCAGGTCCT............................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GCCTACTGGACTGCCACCACT........................... 21 0 11 1.00 11 11 0 0 0 0 0 0 0 0
....................................CGGGCACGTTTGAAATCAGGTCCTC.............................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................CACGTCTGAAATCAGGTCCT............................................................................................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..............................................TGAAATCAGGTCCTCGGCAC......................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................GGACTGCCACCACTACGACCTCTCGCT.............. 27 0 12 0.92 11 11 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................CGTGCCTACTGGACTGCCACCACT........................... 24 0 10 0.90 9 9 0 0 0 0 0 0 0 0
....................................................CAGGTCCTCGGCACCTAACGCAGT............................................................................................................................................................................... 24 0 19 0.89 17 15 0 2 0 0 0 0 0 0
....................................................CAGGTCCTCGGCACCTAACGCAGTCCGT........................................................................................................................................................................... 28 0 17 0.82 14 14 0 0 0 0 0 0 0 0
............................................................CGGCACCTAACGCAGTCCGT........................................................................................................................................................................... 20 0 20 0.80 16 16 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GTGCCTACTGGACTGCCACCACT........................... 23 0 10 0.80 8 7 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................TCGTGCCTACTGGACTGCCACCACT........................... 25 0 10 0.80 8 8 0 0 0 0 0 0 0 0
...........................................................................TCCGTTGAGACACCGGCCTGATT......................................................................................................................................................... 23 0 10 0.80 8 7 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................................TGCCTACTGGACTGCCACCACT........................... 22 0 11 0.73 8 7 0 0 0 0 1 0 0 0
........................................................................CAGTCCGTTGAGACACCGGCCTGAT.......................................................................................................................................................... 25 0 11 0.73 8 5 0 0 2 0 1 0 0 0
.......................................................................GCAGTCCGTTGAGACACCGGCCTGATT......................................................................................................................................................... 27 0 10 0.70 7 5 0 2 0 0 0 0 0 0
............................................................................................................................AGTTGTAGCCATTCGTCCTTGTCT....................................................................................................... 24 0 20 0.70 14 14 0 0 0 0 0 0 0 0
..................................................................................................................GGAAGAGATGAGTTGTAGCCATT.................................................................................................................. 23 0 16 0.69 11 9 0 2 0 0 0 0 0 0
...........................................................................................................................................................................TTAGGTACGAGTAGAATACAGAGT........................................................ 24 0 20 0.65 13 1 6 6 0 0 0 0 0 0
.........................................................CCTCGGCACCTAACGCAGTCCGT........................................................................................................................................................................... 23 0 17 0.65 11 7 0 0 4 0 0 0 0 0
...................................................................AAACGCAGTCCGTTGAGACACCGGCCT............................................................................................................................................................. 27 1 11 0.64 7 7 0 0 0 0 0 0 0 0
.............................................................................................................................GTTGTAGCCATTCGTCCTTGTCT....................................................................................................... 23 0 20 0.60 12 12 0 0 0 0 0 0 0 0
.......................................................GTCCTCGGCACCTAACGCAGTCCGT........................................................................................................................................................................... 25 0 17 0.59 10 9 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................GACTGCCACCACTACGACCTCTCGCT.............. 26 0 12 0.58 7 7 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CACCACTACGACCTCTCGCTCCTT.......... 24 0 14 0.57 8 6 0 0 2 0 0 0 0 0
.........................................................................................................................ATGAATTGTAGCCATTCGTCCTT........................................................................................................... 23 1 20 0.55 11 10 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................CCTACTGGACTGCCACCACT........................... 20 0 13 0.54 7 5 0 0 2 0 0 0 0 0
.......................................................................................................................................................................................................................GCCACCACTACGACCTCTCGCTCCTT.......... 26 0 12 0.50 6 6 0 0 0 0 0 0 0 0
.......................................................................................................................................TTCGTCCTTGTCTTGGCGGCATGAGCAT........................................................................................ 28 0 20 0.50 10 10 0 0 0 0 0 0 0 0
................................................................................................................................................................................TACGAGTAGAATACAGAGTAATGTCGT................................................ 27 0 20 0.50 10 1 4 4 0 1 0 0 0 0
................................................................................TGAGACACCGGCCTGATT......................................................................................................................................................... 18 0 12 0.50 6 6 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CAGAGTAATGTCGTGCCTACTGGACT.................................... 26 0 20 0.50 10 5 0 4 1 0 0 0 0 0
...........................................................................................................................................TCCTTGTCTTGGCGGCATGAGCA......................................................................................... 23 0 20 0.50 10 10 0 0 0 0 0 0 0 0
..............................................................................GTTGAGACACCGGCCTGATT......................................................................................................................................................... 20 0 11 0.45 5 4 0 0 0 1 0 0 0 0
.......................................................................GCAGTCCGTTGAGACACCGGCCTGAT.......................................................................................................................................................... 26 0 11 0.45 5 5 0 0 0 0 0 0 0 0
...............................................GAAATCAGGTCCTCGGCACCT....................................................................................................................................................................................... 21 0 20 0.45 9 6 0 3 0 0 0 0 0 0
...................................................TCAGGTCCTCGGCACCTAACGCAGT............................................................................................................................................................................... 25 0 19 0.42 8 8 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TGCCACCACTACGACCTCTCGCTCCTT.......... 27 0 12 0.42 5 5 0 0 0 0 0 0 0 0
.....................................................................ACGCAGTCCGTTGAGACACCGGCC.............................................................................................................................................................. 24 0 12 0.42 5 5 0 0 0 0 0 0 0 0
.............................................................................CGTTGAGACACCGGCCTGAT.......................................................................................................................................................... 20 0 12 0.42 5 3 0 2 0 0 0 0 0 0
...............................................................................................................................................................................GTACGAGTAGAATACAGAGTAAT..................................................... 23 0 20 0.40 8 8 0 0 0 0 0 0 0 0
............................................................................................................................................CCTTGTCTTGGCGGCATGAGCA......................................................................................... 22 0 20 0.40 8 8 0 0 0 0 0 0 0 0
.............................................................................................................................................CTTGTCTTGGCGGCATGAGCA......................................................................................... 21 0 20 0.40 8 8 0 0 0 0 0 0 0 0
............................................................CGGCACCTAACGCAGTCCGTT.......................................................................................................................................................................... 21 0 20 0.35 7 7 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AATACAGAGTAATGTCGTGCCTACT......................................... 25 0 20 0.35 7 1 0 6 0 0 0 0 0 0
.......................................................................................................................................................................................AGAATACAGAGTAATGTCGTGCCTA........................................... 25 0 20 0.35 7 4 0 3 0 0 0 0 0 0
....................................................................................................................................................................................AGTAGAATACAGAGTAATGTCGT................................................ 23 0 20 0.35 7 4 0 3 0 0 0 0 0 0
......................................................................................................................................................................................TAGAATACAGAGTAATGTCGTGCCTAC.......................................... 27 0 20 0.35 7 4 2 0 1 0 0 0 0 0
..........................................................................................................TTAATGTTGGAAGAGATGAGTTGTAG....................................................................................................................... 26 0 6 0.33 2 0 2 0 0 0 0 0 0 0
..........................................................................................................TTAATGTTGGAAGAGATGAATTGT......................................................................................................................... 24 1 6 0.33 2 0 0 0 0 2 0 0 0 0
..........................................................................................................TTAATGTTGGAAGAGATGAGTTG.......................................................................................................................... 23 0 6 0.33 2 2 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TGCCACCACTACGACCTCTCGCTCCT........... 26 0 12 0.33 4 4 0 0 0 0 0 0 0 0
..............................................................................................................................................TTGTCTTGGCGGCATGAGCA......................................................................................... 20 0 20 0.30 6 6 0 0 0 0 0 0 0 0
.........................................................................................................................ATGAATTGTAGCCATTCGTCCTTGT......................................................................................................... 25 1 20 0.30 6 6 0 0 0 0 0 0 0 0
..........................................................................................................................................TTCCTTGTCTTGGCGGCATGAGCAT........................................................................................ 25 1 20 0.30 6 6 0 0 0 0 0 0 0 0
............................................................................................................................................AAATGTCTTGGCGGCATGAGCAT........................................................................................ 23 3 20 0.30 6 6 0 0 0 0 0 0 0 0
............................................................................................................................................................................TAGGTACGAGTAGAATACAGAGT........................................................ 23 0 20 0.30 6 2 0 3 1 0 0 0 0 0
........................................................................CAGTCCGTTGAGACACCGGCCTGATT......................................................................................................................................................... 26 0 10 0.30 3 2 0 0 1 0 0 0 0 0
....................................................................................................................AAGAGATGAGTTGTAGCCAT................................................................................................................... 20 0 20 0.30 6 2 1 3 0 0 0 0 0 0
..............................................................................................................................................................................................AGAGTAATGTCGTGCCTACTGGACT.................................... 25 0 20 0.30 6 5 0 1 0 0 0 0 0 0
.....................................................AGGTCCTCGGCACCTAACGCAGT............................................................................................................................................................................... 23 0 20 0.30 6 6 0 0 0 0 0 0 0 0
........................................................TCCTCGGCACCTAACGCAGTCCGT........................................................................................................................................................................... 24 0 17 0.29 5 4 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................CCACTACGACCTCTCGCTCCTT.......... 22 0 14 0.29 4 3 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................................................ACCACTACGACCTCTCGCTCCTT.......... 23 0 14 0.29 4 4 0 0 0 0 0 0 0 0
......................................................................AACAGTCCGTTGAGACACCGGCCTGATT......................................................................................................................................................... 28 2 11 0.27 3 0 0 3 0 0 0 0 0 0
...........................................................................TCCGTTGAGACACCGGCCTGAT.......................................................................................................................................................... 22 0 11 0.27 3 3 0 0 0 0 0 0 0 0
............................................................................CCGTTGAGACACCGGCCTGATT......................................................................................................................................................... 22 0 11 0.27 3 3 0 0 0 0 0 0 0 0
.......................................................................AAAGTCCGTTGAGACACCGGCCTGAT.......................................................................................................................................................... 26 2 11 0.27 3 3 0 0 0 0 0 0 0 0
......................................................................TGCAGTCCGTTGAGACACCGGCCT............................................................................................................................................................. 24 1 11 0.27 3 3 0 0 0 0 0 0 0 0
........................................................................AAGTCCGTTGAGACACCGGCCTGAT.......................................................................................................................................................... 25 1 11 0.27 3 2 0 0 0 0 1 0 0 0
...................................................................TAACGCAGTCCGTTGAGACACCGGCCT............................................................................................................................................................. 27 0 11 0.27 3 3 0 0 0 0 0 0 0 0
.............................................................................CGTTGAGACACCGGCCTGATT......................................................................................................................................................... 21 0 11 0.27 3 2 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................AACGACCTCTCGCTCCTTTTCGCTGAT. 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................AGTAGAATACAGAGTAATGTCGTGC.............................................. 25 0 20 0.25 5 5 0 0 0 0 0 0 0 0
.................................................................................GAGACACCGGCCTGATTTCAGGAG.................................................................................................................................................. 24 0 12 0.25 3 3 0 0 0 0 0 0 0 0
.............................................................GGCACCTAACGCAGTCCGTT.......................................................................................................................................................................... 20 0 20 0.25 5 5 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GAATACAGAGTAATGTCGTGCCTACT......................................... 26 0 20 0.25 5 0 0 5 0 0 0 0 0 0
..............................................................................................................................................................................GGTACGAGTAGAATACAGAGTAA...................................................... 23 0 20 0.25 5 5 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................ACGACCTCTCGCTCCTTTTCGCTGAT. 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................GTCCTTGTCTTGGCGGCAT.............................................................................................. 19 0 20 0.25 5 5 0 0 0 0 0 0 0 0
..............................................................................GTTGAGACACCGGCCTGAT.......................................................................................................................................................... 19 0 12 0.25 3 2 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................GAGTAATGTCGTGCCTACTGGACT.................................... 24 0 20 0.25 5 4 0 0 0 0 1 0 0 0
.........................................................................................................................ATGAATTGTAGCCATTCGTCCT............................................................................................................ 22 1 20 0.25 5 5 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CGACCTCTCGCTCCTTTTCGCTGATT 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................TGTCCTTGTCTTGGCGGCATGAGCAT........................................................................................ 26 1 20 0.25 5 5 0 0 0 0 0 0 0 0
............................................................................................................................................ACTTGTCTTGGCGGCATGAGCAT........................................................................................ 23 1 20 0.25 5 5 0 0 0 0 0 0 0 0
.................................................................................GAGACACCGGCCTGATTTCAGGAGT................................................................................................................................................. 25 0 12 0.25 3 3 0 0 0 0 0 0 0 0
...........................................................................................................................GAGTTGTAGCCATTCGTCCTTGTC........................................................................................................ 24 0 20 0.25 5 5 0 0 0 0 0 0 0 0
..................................................................CTAACGCAGTCCGTTGAGACACCGGCC.............................................................................................................................................................. 27 0 12 0.25 3 3 0 0 0 0 0 0 0 0
....................................................................AACGCAGTCCGTTGAGACACCGGCC.............................................................................................................................................................. 25 0 12 0.25 3 3 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CCACCACTACGACCTCTCGCTCCTT.......... 25 0 12 0.25 3 1 0 0 2 0 0 0 0 0
.......................................................................................................................................................................................................................GCCACCACTACGACCTCTCGCT.............. 22 0 13 0.23 3 3 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................ACTGCCACCACTACGACCTCTCGCT.............. 25 0 13 0.23 3 3 0 0 0 0 0 0 0 0
............................................................CGGCACCTAACGCAGTCCGTTGAGA...................................................................................................................................................................... 25 0 13 0.23 3 3 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CACCACTACGACCTCTCGCTCCTTT......... 25 0 14 0.21 3 2 0 0 1 0 0 0 0 0
..........................................................ATCGGCACCTAACGCAGTCCGT........................................................................................................................................................................... 22 1 19 0.21 4 4 0 0 0 0 0 0 0 0
....................................................CAGGTCCTCGGCACCTAACGCAGTC.............................................................................................................................................................................. 25 0 19 0.21 4 1 0 3 0 0 0 0 0 0
...............................................................................................................................................TGTCTTGGCGGCATGAGCA......................................................................................... 19 0 20 0.20 4 4 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................ACGTGCCTACTGGACTGCCACCACT........................... 25 1 10 0.20 2 1 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................CGTGCCTACTGGACTGCCACCAC............................ 23 0 10 0.20 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................AGAATACAGAGTAATGTCGTGCCTACT......................................... 27 0 20 0.20 4 1 1 2 0 0 0 0 0 0
...........................................................................................................................................................................................AAAAGAGTAATGTCGTGCCT............................................ 20 2 20 0.20 4 0 0 4 0 0 0 0 0 0
......................................................................................................................................................................................................GTCGTGCCTACTGGACTGCCACCAC............................ 25 0 10 0.20 2 2 0 0 0 0 0 0 0 0
............................................................................................................................AGTTGTAGCCATTCGTCCTTGTCTT...................................................................................................... 25 0 20 0.20 4 4 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TTAGGTACGAGTAGAATACAGAGTAAT..................................................... 27 0 20 0.20 4 3 0 0 0 1 0 0 0 0
.........................................................................TGTCCGTTGAGACACCGGCCTGAT.......................................................................................................................................................... 24 1 15 0.20 3 3 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CACTACGACCTCTCGCTCCTT.......... 21 0 20 0.20 4 3 0 0 0 0 0 0 1 0
.................................................................................................................................................................................ACGAGTAGAATACAGAGTAATGTCGT................................................ 26 0 20 0.20 4 3 1 0 0 0 0 0 0 0
...........................................................................TCCGTTGAGACACCGGCCTGATTCAG...................................................................................................................................................... 26 3 10 0.20 2 0 0 0 2 0 0 0 0 0
.........................................................................AGTCCGTTGAGACACCGGCCTGA........................................................................................................................................................... 23 0 11 0.18 2 2 0 0 0 0 0 0 0 0
.......................................................................ACAGTCCGTTGAGACACCGGCCTGAT.......................................................................................................................................................... 26 1 11 0.18 2 2 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................AGTGCCTACTGGACTGCCACCACT........................... 24 1 11 0.18 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................GCCTACTGGACTGCCACCAC............................ 20 0 11 0.18 2 2 0 0 0 0 0 0 0 0
.........................................................................AGTCCGTTGAGACACCGGCCT............................................................................................................................................................. 21 0 11 0.18 2 2 0 0 0 0 0 0 0 0
........................................................................CAGTCCGTTGAGACACCGGCCT............................................................................................................................................................. 22 0 11 0.18 2 1 0 0 1 0 0 0 0 0
......................................................................CGCAGTCCGTTGAGACACCGGCCTGAT.......................................................................................................................................................... 27 0 11 0.18 2 1 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................AGTGCCTACTGGACTGCCACCAC............................ 23 1 11 0.18 2 2 0 0 0 0 0 0 0 0
......................................................GGTCCTCGGCACCTAACGCAGTCCGT........................................................................................................................................................................... 26 0 17 0.18 3 3 0 0 0 0 0 0 0 0
.....................................................AGGTCCTCGGCACCTAACGCAGTCCGT........................................................................................................................................................................... 27 0 17 0.18 3 3 0 0 0 0 0 0 0 0
..........................................................ATCGGCACCTAACGCAGTCCGTTGA........................................................................................................................................................................ 25 1 17 0.18 3 3 0 0 0 0 0 0 0 0
...................................CCATGCACGGTTGAAATCA..................................................................................................................................................................................................... 19 3 6 0.17 1 0 0 0 0 0 1 0 0 0
............................................................CGGCACCTAACGCAGTCCGTTGAGAC..................................................................................................................................................................... 26 0 12 0.17 2 2 0 0 0 0 0 0 0 0
...................................................................AAACGCAGTCCGTTGAGACACCGGCC.............................................................................................................................................................. 26 1 12 0.17 2 2 0 0 0 0 0 0 0 0
..................................................................CTAACGCAGTCCGTTGAGACACCGGC............................................................................................................................................................... 26 0 12 0.17 2 2 0 0 0 0 0 0 0 0
.................................................................CCTAACGCAGTCCGTTGAGACACCG................................................................................................................................................................. 25 0 12 0.17 2 2 0 0 0 0 0 0 0 0
.......................................................................................................AGTTTAATGTTGGAAGAGATGAGT............................................................................................................................ 24 0 6 0.17 1 0 0 1 0 0 0 0 0 0
................................................................................TGAGACACCGGCCTGATTTCAGGAG.................................................................................................................................................. 25 0 12 0.17 2 1 1 0 0 0 0 0 0 0
.................................................................CCTAACGCAGTCCGTTGAGACACCGGCC.............................................................................................................................................................. 28 0 12 0.17 2 2 0 0 0 0 0 0 0 0
...............................................................CACCTAACGCAGTCCGTTGAGACAC................................................................................................................................................................... 25 0 12 0.17 2 2 0 0 0 0 0 0 0 0
....................................................................................................AGGAGTTTAATGTTGGAAGAGATGAGT............................................................................................................................ 27 0 6 0.17 1 0 0 0 0 1 0 0 0 0
..................................................................CTAACGCAGTCCGTTGAGACACCGG................................................................................................................................................................ 25 0 12 0.17 2 2 0 0 0 0 0 0 0 0
...........................................................................................................TAATGTTGGAAGAGATGAGTTG.......................................................................................................................... 22 0 6 0.17 1 1 0 0 0 0 0 0 0 0
..........................................................................................................TTAATGTTGGAAGAGATCAGTTGT......................................................................................................................... 24 1 6 0.17 1 0 0 0 0 1 0 0 0 0
..........................................................................................................TTAATGTTGGAAGAGATGAGTTGTA........................................................................................................................ 25 0 6 0.17 1 1 0 0 0 0 0 0 0 0
............................................................................CCGTTGAGACACCGGCCTGAT.......................................................................................................................................................... 21 0 12 0.17 2 1 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................CCTACTGGACTGCCACCACTACGACCT.................... 27 0 12 0.17 2 2 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GGACTGCCACCACTACGACCT.................... 21 0 12 0.17 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GCCACCACTACGACCTCTCGCTCCT........... 25 0 12 0.17 2 2 0 0 0 0 0 0 0 0
...........................................................TCGGCACCTAACGCAGTCCGT........................................................................................................................................................................... 21 0 19 0.16 3 3 0 0 0 0 0 0 0 0
........................................................................................................................................................................CCCTTAGGTACGAGTAGAATACAGAT......................................................... 26 1 19 0.16 3 3 0 0 0 0 0 0 0 0
..................................................................CTAACGCAGTCCGTTGAGACAC................................................................................................................................................................... 22 0 13 0.15 2 2 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CCACCACTACGACCTCTCGCT.............. 21 0 13 0.15 2 2 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................GTCGTGCCTACTGGACTGCCAC............................... 22 0 13 0.15 2 2 0 0 0 0 0 0 0 0
.............................................................GGCACCTAACGCAGTCCGTTGAGA...................................................................................................................................................................... 24 0 13 0.15 2 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TGCCACCACTACGACCTCTCGCT.............. 23 0 13 0.15 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TCGTGCCTACTGGACTGCCACCA............................. 23 0 13 0.15 2 1 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................AATGTCGTGCCTACTGGACTGCCAC............................... 25 0 13 0.15 2 2 0 0 0 0 0 0 0 0
.........................................................................................................................................CGTCCTTGTCTTGGCGGCAT.............................................................................................. 20 0 20 0.15 3 3 0 0 0 0 0 0 0 0
..........................................................................................................................................ATCCTTGTCTTGGCGGCATGAGCAT........................................................................................ 25 1 20 0.15 3 3 0 0 0 0 0 0 0 0
.........................................................................................................................ATGAGTTGTAGCCATTCGTCCTTGTCT....................................................................................................... 27 0 20 0.15 3 3 0 0 0 0 0 0 0 0
.................................................................................................................................................................................ACGAGTAGAATACAGAGTAATGTCG................................................. 25 0 20 0.15 3 2 0 0 0 1 0 0 0 0
..........................................................................................................................................GTCCTTGTCTTGGCGGCATGAG........................................................................................... 22 0 20 0.15 3 3 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AATACAGAGTAATGTCGTGCCTAC.......................................... 24 0 20 0.15 3 1 0 2 0 0 0 0 0 0
.............................................................................................................................................................................................CAGAGTAATGTCGTGCCTACTGGAC..................................... 25 0 20 0.15 3 0 0 3 0 0 0 0 0 0
..................................................................................................................................AGCCATTCGTCCTTGTCTTGGCGGCAT.............................................................................................. 27 0 20 0.15 3 3 0 0 0 0 0 0 0 0
...................................................................................................................................................................GCCTTCCCTTAGGTACGAGTAGAAT............................................................... 25 0 20 0.15 3 0 0 0 0 3 0 0 0 0
.....................................................................................CACCGGCCTGATTTCAGGAGT................................................................................................................................................. 21 0 20 0.15 3 3 0 0 0 0 0 0 0 0
...............................................................................................................................................TGTCTTGGCGGCATGAGCATGCCT.................................................................................... 24 0 20 0.15 3 3 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CCTTAGGTACGAGTAGAATACAGAGT........................................................ 26 0 20 0.15 3 1 2 0 0 0 0 0 0 0
.......................................................................................................................................................................................AGAATACAGAGTAATGTCGTGCC............................................. 23 0 20 0.15 3 3 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TACAGAGTAATGTCGTGCCTACT......................................... 23 0 20 0.15 3 0 0 3 0 0 0 0 0 0
.........................................................................................................................................CGTCCTTGTCTTGGCGGCATGAGC.......................................................................................... 24 0 20 0.15 3 3 0 0 0 0 0 0 0 0
....................................................CAGGTCCTCGGCACCTAACGCAG................................................................................................................................................................................ 23 0 20 0.15 3 3 0 0 0 0 0 0 0 0
..................................................................................................................................................................................CGAGTAGAATACAGAGTAATGTCGTGC.............................................. 27 0 20 0.15 3 2 1 0 0 0 0 0 0 0
............................................................................................................................................................................................ACAGAGTAATGTCGTGCCTACTGGAC..................................... 26 0 20 0.15 3 3 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................GTAGAATACAGAGTAATGTCGTGC.............................................. 24 0 20 0.15 3 3 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GAATACAGAGTAATGTCGTGCCT............................................ 23 0 20 0.15 3 2 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................................................ACCACTACGACCTCTCGCTCCT........... 22 0 14 0.14 2 2 0 0 0 0 0 0 0 0
..............................................................................................................TGTTGGAAGAGATGAGTTGT......................................................................................................................... 20 0 7 0.14 1 0 0 1 0 0 0 0 0 0
................................................................................TGAGACACCGGCCTGATTCAG...................................................................................................................................................... 21 3 14 0.14 2 1 0 0 0 1 0 0 0 0
..................................................................................AGACACCGGCCTGATTTCAGGAGT................................................................................................................................................. 24 0 14 0.14 2 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CACCACTACGACCTCTCGCTCCT........... 23 0 14 0.14 2 2 0 0 0 0 0 0 0 0
.................................................................................................................TGGAAGAGATGAGTTGTAGCCATT.................................................................................................................. 24 0 8 0.13 1 1 0 0 0 0 0 0 0 0
...................................................................................................................GAAGAGATGAGTTGTAGCCATT.................................................................................................................. 22 0 16 0.13 2 2 0 0 0 0 0 0 0 0
.................................................................................................................TGGAAGAGATGAGTTGTAGCCAT................................................................................................................... 23 0 8 0.13 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TCCCTTAGGTACGAGTAGAATACAGAGT........................................................ 28 0 18 0.11 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................CGGCATGAGCATGCCTTCCC................................................................................ 20 0 19 0.11 2 2 0 0 0 0 0 0 0 0
......................................................GGTCCTCGGCACCTAACGCAGTCC............................................................................................................................................................................. 24 0 19 0.11 2 2 0 0 0 0 0 0 0 0
......................................................................................................................................................GCGGCATGAGCATGCCTTCCCT............................................................................... 22 0 19 0.11 2 2 0 0 0 0 0 0 0 0
................................................................................................................................................................................TACGAGTAGAATACAGAGTAAT..................................................... 22 0 20 0.10 2 0 2 0 0 0 0 0 0 0
.............................................................................................................................................ATTGTCTTGGCGGCATGAGCA......................................................................................... 21 1 20 0.10 2 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................................AGGTACGAGTAGAATACAGAGT........................................................ 22 0 20 0.10 2 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................CGTGCCTACTGGACCGCCACCACT........................... 24 1 10 0.10 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................GTCCTTGTCTTGGCGGCATGAGC.......................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................AGAGTAATGTCGTGCCTACTGGAC..................................... 24 0 20 0.10 2 0 0 2 0 0 0 0 0 0
.....................................................................ACGCAGTCCGTTGAGACACCGGCCTGATT......................................................................................................................................................... 29 0 10 0.10 1 1 0 0 0 0 0 0 0 0
.........................................................................ATTCCGTTGAGACACCGGCCTGATT......................................................................................................................................................... 25 1 10 0.10 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TTTCGTGCCTACTGGACTGCCACCACT........................... 27 1 10 0.10 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................AGCCATTCGTCCTTGTCTTGGC................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..........................................................................................................................TGAGTTGTAGCCATTCGTCCTTGT......................................................................................................... 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.......................................................................ACAGTCCGTTGAGACACCGGCCTGATT......................................................................................................................................................... 27 1 10 0.10 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................AATAAAGAGTAATGTCGTGCCT............................................ 22 1 20 0.10 2 0 0 2 0 0 0 0 0 0
.......................................................................AAAGTCCGTTGAGACACCGGCCTGATT......................................................................................................................................................... 27 2 10 0.10 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TGTCGTGCCTACTGGACTGCCACCACT........................... 27 0 10 0.10 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................CTTGTCTTGGCGGCTTGAGCAT........................................................................................ 22 1 20 0.10 2 2 0 0 0 0 0 0 0 0
........................................................................................................................GATGAGTTGTAGCCATTCGTCCTTGT......................................................................................................... 26 0 20 0.10 2 1 0 0 1 0 0 0 0 0
............................................................CGGCACCTAACGCAGTCCG............................................................................................................................................................................ 19 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...........................................................................TCCGTTGAGACACCGGCCTGATTC........................................................................................................................................................ 24 1 10 0.10 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................GTCGTGCCTACTGGACTG................................... 18 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................CGGCATGAGCATGTTTTCCCTTAGGT.......................................................................... 26 2 20 0.10 2 0 0 2 0 0 0 0 0 0
.............................................................................................................................................CTTGTCTTGGCGGCATGAGCATG....................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................................AGGTACGAGTAGAATACAGAGTAA...................................................... 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TAGAATACAGAGTAATGTCGTGC.............................................. 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0
......................................................................CGCAGTCCGTTGAGACACCGGCCTGATT......................................................................................................................................................... 28 0 10 0.10 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................GTACGAGTAGAATACAGAGTAA...................................................... 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.................................................................................................................................................................................ACGAGTAGAATACAGAGTAATGTCGTGC.............................................. 28 0 20 0.10 2 2 0 0 0 0 0 0 0 0
............................................................................................................................................................................................ACAGAGTAATGTCGTGCCTACT......................................... 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................AGAGTAATGTCGTGCCTACT......................................... 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0
........................................................................................................................GATGAGTTGTAGCCATTCGTCCTTGTCT....................................................................................................... 28 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..........................................................................GTCCGTTGAGACACCGGCTTGATT......................................................................................................................................................... 24 1 10 0.10 1 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................GAGTAGAATACAGAGTAATGTCGT................................................ 24 0 20 0.10 2 0 0 0 0 2 0 0 0 0
.........................................................................................................................................................................................................GTGCCTACTGGACTGCCACCAC............................ 22 0 10 0.10 1 1 0 0 0 0 0 0 0 0
...............................................................................TTGAGACACCAGCCTGACATC....................................................................................................................................................... 21 3 20 0.10 2 0 2 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GTGCCTACTGGACTGCCACCACTA.......................... 24 0 10 0.10 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................AGTAATGTCGTGCCTACTGGACTG................................... 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..................................................................................................................................................................................CGAGTAGAATACAGAGTAAT..................................................... 20 0 20 0.10 2 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................GTAGAATACAGAGTAATGTCGTGCCT............................................ 26 0 20 0.10 2 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................GAGTAATGTCGTGCCTACTGGACTGC.................................. 26 0 20 0.10 2 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................CTTAGGTACGAGTAGAATACAGAGT........................................................ 25 0 20 0.10 2 1 1 0 0 0 0 0 0 0
...............................................................................................................................................TGTCTTGGCGGCATGAGCATGCCTT................................................................................... 25 0 20 0.10 2 2 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................ATGTCGTGCCTACTGGACTGCCACCACT........................... 28 0 10 0.10 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................TTTGTCTTGGCGGCATGAGCA......................................................................................... 21 1 20 0.10 2 2 0 0 0 0 0 0 0 0
...........................................................................TCCGTTGAGACACCGGCCTGATTCA....................................................................................................................................................... 25 2 10 0.10 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................CGTCCTGGTCTTGGCGGCATGAGCAT........................................................................................ 26 1 20 0.10 2 0 0 0 2 0 0 0 0 0
..........................................................................................................................................GTCCTTGTCTTGGCGACATGAGCAT........................................................................................ 25 1 20 0.10 2 0 0 2 0 0 0 0 0 0
...................................................TCAGGTCCTCGGCACCTAACGCA................................................................................................................................................................................. 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................GTCGTGCCTACTGGACTGCCACCACTA.......................... 27 0 10 0.10 1 1 0 0 0 0 0 0 0 0
........................................................................AAGTCCGTTGAGACACCGGCCTGATT......................................................................................................................................................... 26 1 10 0.10 1 1 0 0 0 0 0 0 0 0
.....................................................................................CACCGGCCTGATTTCAGGAGTTT............................................................................................................................................... 23 0 20 0.10 2 0 2 0 0 0 0 0 0 0
.......................................................................................................................................................................................AGAATACAGAGTAATGTCGT................................................ 20 0 20 0.10 2 0 2 0 0 0 0 0 0 0
............................................................................................................................AGTTGTAGCCATTCGTCCTTGTC........................................................................................................ 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...................................................................................................................................................................................GAGTAGAATACAGAGTAATGTCGTGC.............................................. 26 0 20 0.10 2 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................ATGTCGTGCCTACTGGACTGCCACCAC............................ 27 0 10 0.10 1 1 0 0 0 0 0 0 0 0
..................................................ATCAGGTCCTCGGCACCTAACGCAG................................................................................................................................................................................ 25 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................ATGTGCCTACTGGACTGCCACCAC............................ 24 2 10 0.10 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................CGTCCTTGTCTTGGCGGCATGAGCATG....................................................................................... 27 0 20 0.10 2 2 0 0 0 0 0 0 0 0
........................................................................................................................................TCGTCCTTGTCTTGGCGGCATGAG........................................................................................... 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
........................................................................................................................................TCGTCCTTGTCTTGGCGGCAT.............................................................................................. 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................GTAGAATACAGAGTAATGTCGTGCC............................................. 25 0 20 0.10 2 0 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................GTCGTGTCTACTGGACTGCCACCACT........................... 26 1 10 0.10 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................TGAGTTGTAGCCATTCGTCCTTGTC........................................................................................................ 25 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CAGAGTAATGTCGTGCCTACTGG....................................... 23 0 20 0.10 2 0 2 0 0 0 0 0 0 0
..............................................................................................................................................TTGTCTTGGCGGCATGAGCATGCCT.................................................................................... 25 0 20 0.10 2 2 0 0 0 0 0 0 0 0
........................................................................................................................................TCGTCCTTGTCTTGGCGGCATGAGCA......................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...........................................................ATGGCACCTAACGCAGTCCGT........................................................................................................................................................................... 21 2 20 0.10 2 2 0 0 0 0 0 0 0 0
..........................................................................GTCCGTTGAGACACCGGCCTGATTC........................................................................................................................................................ 25 1 10 0.10 1 1 0 0 0 0 0 0 0 0
......................................................GGTCCTCGGCACCTAACGCAGT............................................................................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................GTCGTGCCTACTGGACTGCCA................................ 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TCGTGCCTACTGGACTGCCACCAC............................ 24 0 10 0.10 1 0 0 0 1 0 0 0 0 0
.........................................................................AGTCCGTTGAGACACCGGCCTGATTC........................................................................................................................................................ 26 1 10 0.10 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................TTTGTCTTGGCGGCATGAGCAT........................................................................................ 22 1 20 0.10 2 2 0 0 0 0 0 0 0 0
....................................................CAGGTCCTCGGCACCTAACGCA................................................................................................................................................................................. 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 3:227586-227836 - dps_901 GC-CATGGAGAGAGGGCCCGCCGACATAGGGACAAGGGCCCGTGCAAACTTTAGTCCAGGAGCCGTGGATTGCGTCAGG---CAACTCTGTGGCCGGACTAAAGTCCTC-AAATTACAACCTTCTCTACTCAACATCGGTAAGCAGGAACAGAACCGCCGTACTCGTACGGAAGGGAATCCATGCTCATCTTATGTCTCATTACAGCACGGATGACCTGACGGTGGTGA----TGCTGGAG-AGCGAGGAAAAGCGACTAA
droPer2 scaffold_2:407541-407791 - GC-CATGGAGAGAGGGTCCGCCGACATAGGGACAAGGGCCCGTGCAAACTTTAGTCCAGGAGCCGTGGATTGCGTCAGG---CAACTCTGTGGCCGGACTAAAGTCCTC-AAATTACAACCTTCTCTACTCAACATCGGTAAGCAGGAACAGAACCGCCGTACTCGTACGGAAGGGAATCCATGCTCATCTTATGTCTCATTACAGCACGGATGACCTGACGGTGGTGA----TGCTGGAG-AGCGAGGAAAAGCGACTAA
droWil2 scf2_1100000004909:1144064-1144282 + AC-CCTGGAGGAGGATGCCAGCGACGTCG-------------------CTCTAGTCCAGAAACCG---------TCAGG---CAACACGGTTTCCGGGCTGAGATCATC-T----TTTATCTCTTATACCACACCACAGTAAGAAGAACCAGAACGGCCGTCATGGTACGCAAAGGACTACATGCTTATATAATTTCTCAAAAAAGCACCGATGACCTCACAGTTGTAG----CAATTGAA-GGCACCAGCCACCGCATTC
droGri2 scaffold_14857:34440-34668 - CG-CCTGGCCGGAGGCGGAGACGACATAG-------------------TACTAGTCCAAGAACCTTGGGTGATTG---GAGGAA---AGGTTTGTGGACTAGGAAACAA-AAATTACAAGCTCTTAGTAGCTGGAAATGAAGGTAAAAAACGTACCTGCATCCTCGCGAAAAAACATCTAAATATTTTTCTGCTCCATAATTTTAGTAATGATGACAACACAGCGGTAA----GCCTGGAG-CTCCAGTCAGCTTCGGTAA
droAna3 scaffold_13250:2119136-2119355 + TG-GCTGAAGAT----GGAGCCGATATAG-------------------TCCTAGTTCAGGAACCTTGGATAGCAG---GAGGTA---GGGTTTCTAGACTAGCGGCCAA-GAAGTGCAAGCTTTTAGTAGTTAACACTGAAGGTAAAATTAGAGCCTGCATTTTAGCTTAAAAGCACCTTAGCATATTAATGCTCCATAAATACAGCAACGAAGACAATATGGCAGCCA----CTTTGGAG-TCG-----CAAACGACTCC
droBip1 scf7180000391956:22668-22892 + CCACCTCGCCGAGAGTGGAGCTGATGTGG-------------------CCTTCATCCAGGAACCCTGGATCCTTG---GAGACA---AGATTCTTGGGCTGGGGGCATC-GGAGTTTAGGCTCTGCAAAGCCGATACTACAGGTAA----AA-AGCTGCATTCTCGCAAAAAAGAACCTTAACCTCTTTTTGCTACCCAATTTCAGCAATGAAGACCACGTCGCCGCAG----CCATAGAG-AGCCCAAAGGGCCCTCTAA
droKik1 scf7180000299706:44519-44751 - GC-CATGGAGCAAGGATCCGCCGACATAG-------------------CTTTGGTCCAGGAGCCATGGATTGCCTCAGG---CAATGCCATCGCCGGACTGAAGTCCGCAAAATTACAATTTGCTCTATCCACCAACGGTAAGCAGGAATAGAACCGCCGTACTTGTACGGAAGGGTCTACACGCTAACCTTATGTCTCACTACAGCTCTGATGACCTGACCGTGGTGA----TGCTAGAG-AGCGGGAAAAAGCGCCTTT
droFic1 scf7180000452125:10978-11180 - GC-CATGGTGTAAGCGCCCATCGTC------------------------------------GCTATAGGTCACCCCGCA---CAATGCCGCAGCCGGACTGAAGACCTC-AAGTTACAACAATTTCATTTCAGCAGCGGTAAGCAGGAACAGAAACCC-----------AGGAGGCTATCCATGCTAATTCAATGCCTTATTACAGCTCTTACGACCTGACTGTGGTGA----TGCTGGAA-AGCAAGGAGAAACGG-TAG
droEle1 scf7180000491238:1278905-1279131 - GC-CCTACATCAGGGATCCTTTGACATAG-------------------C-----TCCAGGAGCAATGGATTGCCTCAGG---CAATTCCGTGGTCGGACAAAAGTCCTC-AAATTACAACCCACTCTACTCACTATCGGTAAGCAGGAACATGACTACCATCCTAGTGAGGAAGGGTATCCACGCTAACCTTATGTCTCGTTACAGCTTTGATGACGTCACTGTCGAGA----TGCTAGAG-ACCGAGGAGAAGCACCTTC
droRho1 scf7180000758786:4017-4239 - CG-CCTGGCCAAAGGCGAAGCCGACGTGG-------------------TCTTAGTTCAGGAACCCTGG-TAGC-A---GAGGCA---GGGTTGCTGGACTGGGAACAAA-AGACTACAAGCTTATGCATGACCCCAAACAAGGTAAAATTCGAACCTGCATTTTAGCCAAACGGCGTCTTAGTACATTTCTGCTTCACAAATACAGCAACGGAGACAACACAGCAATAA----GCCTGGAG-CT----GCAAAGCGGCTCT
droBia1 scf7180000302042:30731-30949 + GC-CTTGGAGCAGGGAACCTTCGACATAG-------------------CCTTGGTTCAAGAGCCATGAATTGCCTC-GG---CAGTATCGTTGCCGGTCTAAGGTCTTC-AAACTACAATACATTATACTCACCAACTGTATGTAGGAACAGAAGCGCCGTACTTGTGTGGAAGGG------------CCTTATGCCTCATCACACCTCTGATGACTTCATTACTGTGA----TGCTAGAA-AGCAAGGGGCAGCGTCTTT
droTak1 scf7180000415100:4193-4424 + GC-CCTAGAGCAAGGACCCGTCGACATAG-------------------CCTTGGTTCAAGAGCCATGGATTGCCTCGGG---CAATATCGTGGCCGGACTAAGGTCCTC-AAACTACAATACATTCTACTCACCAACGGTAAGCAGGAACAGAAGCGCCGTACTTGTGCGGAAGGGTATCCATGCTAACCTTATGCCTCATTACAGCTCTGACGACTTGACTGCGGTGA----TGCTAGAA-AGCGAGGAGCAGCGCCTCT
droSim2 node_116076:1-179 + --------------------------------------------------------------------ATTGTCTCGGG---CAATCCCGTCGCTGGACTAAAGTCCTC-CATTTACAACCTGTTCTATACACCATCGGTAAGCAGAAACAGAGCCGCCGTACTTGTTCG-----GCCTGCATGCTAACCTTATGTCTCATTACAGCACTGATGACCTGGCTGTTGTGA----TGCTAGAG-AGCGAGAGGAATCGCCTTT
droSec2 scaffold_171:21991-22063 + AT-ACTT---------------------------------------------------------ATAGAATATCTCACG---CGGGACTGT-------------------------------------------------------------------------------------------------------------------------TTACC-GATCGTGATGGAAGATGTGGGAGCA-----GCCAAGAAGACTG
droYak3 v2_chr2L_random_031:94472-94703 + GC-CCTGGAGCAAGGGTCCGCCGACATAG-------------------CTTTGGTCCAAGAGCCATGGATTGCCTCGGG---CAATGCCGTCGCCTGACTAAAGTCCTC-CAATTACAACCTGTTCTATACACCATTGGTAAGCAGAAACAGAGCCGCCGTACTTGTACGGAAGGGCCTGCATGCTAACCTTATGTCTCATTACAGCACGGATGACATGACTGTTGTGA----TGCTGGAA-AGCGAGATGAAGCGCCTTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GC-CATGGAGAGAGGGCCCGCCGACATAGGGACAAGGGCCCGTGCAAACTTTAGTCCAGGAGCCGTGGATTGCGTCAGG---CAACTCTGTGGCCGGACTAAAGTCCTC-AAATTACAACCTTCTCTACTCAACATCGGTAAGCAGGAACAGAACCGCCGTACTCGTACGGAAGGGAATCCATGCTCATCTTATGTCTCATTACAGCACGGATGACCTGACGGTGGTGA----TGCTGGAG-AGCGAGGAAAAGCGACTAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................TGTCTCATTACAGCACGGATGAC.............................................23203.757507500000000
...................................................TAGTCCAGGAGCCGTGGATTGC............................................................................................................................................................................................22203.456906810000000
.............................................................................................................................CTACTCAACATCGGTAAGCAGGAAC...............................................................................................................25202.054103810000200
...................................................TAGTCCAGGAGCCGTGGATTGCG...........................................................................................................................................................................................23201.953903800000010
...................................................TAGTCCAGGAGCCGTGGATTG.............................................................................................................................................................................................21201.302602400200000
...................................................TAGTCCAGGAGCCGTGGATTGCGT..........................................................................................................................................................................................24201.102202200000000
..................................................................................................................................................................................................................................TGA----TGCTGGAG-AGCGAGGAAAAGCGAC...2741.0040000000040
................................................................................................................................................................TACTCGTACGGAAGGGAATCCATGC............................................................................25160.81130010001560
...................................................TAGTCCAGGAGCCGTGGATTGCGTCAG.......................................................................................................................................................................................27180.5090900000000
................................................................................................................................................................TACTCGTACGGAAGGGAATCCATG.............................................................................24160.5080600000200
.............................................................................................................................CTACTCAACATCGGTAAGCAG...................................................................................................................21200.4590000000630
.............................................................................................................................CTACTCAACATCGGTAAGCA....................................................................................................................20200.4590800000100
..............................................................................................................................................................CGTACTCGTACGGAAGGGAATCC................................................................................23190.4280800000000
......................................................................TGCGTCAGG---CAACTCTGTGGCC......................................................................................................................................................................22120.4250200000300
...................................................TAGTCCAGGAGCCGTGGATTGCGTC.........................................................................................................................................................................................25200.4080600001100
....................................................AGTCCAGGAGCCGTGGATTGC............................................................................................................................................................................................21200.4080700010000
........................................................................................TGTGGCCGGACTAAAGTCCTC-AAAT...................................................................................................................................................25110.3640200000200
...............................................................................................................................................................................................................................TGGTGA----TGCTGGAG-AGCGAGGAA..........23140.3650500000000
..................................................................................................................................................................................................................................TGA----TGCTGGAG-AGCGAGGAAAAG.......23200.3570700000000
..............................................................................................................................................................CGTACTCGTACGGAAGGGAATCCA...............................................................................24190.3260600000000
....................................................AGTCCAGGAGCCGTGGATTGCG...........................................................................................................................................................................................22200.3060600000000
....................................................AGTCCAGGAGCCGTGGATTG.............................................................................................................................................................................................20200.3060600000000
...................................................TAGTCCAGGAGCCGTGGA................................................................................................................................................................................................18200.3060600000000
..............................................................................................................................TACTCAACATCGGTAAGCAGGAACA..............................................................................................................25200.3060600000000
.............................................................................................................................CTACTCAACATCGGTAAGCAGGAA................................................................................................................24200.2550000001040
.............................................................................................................................CTACTCAACATCGGTAAGCAGG..................................................................................................................22200.2550000005000
...................................................................................................................................AACATCGGTAAGCAGGAACAGAACC.........................................................................................................25200.2550000000041
..................................................................................................................................................................................................GTCTCATTACAGCACGGATGA..............................................21200.2550500000000
..................................................................................................................................................................................................GTCTCATTACAGCACGGATGAC.............................................22200.2550500000000
..............................................................................................................................................................................................................CACGGATGACCTGACGGTGG...................................20130.2330000000300
.................................................................TGGATTGCGTCAGG---CAACTCTG...........................................................................................................................................................................22130.2330000000300
............................................................................................GCCGGACTAAAGTCCTC-AAATTAC................................................................................................................................................24140.2130000000300
..................................................................................................................................................................................................GTCTCATTACAGCACGGATG...............................................20200.2040400000000
...................................................TAGTCCAGGAGCCGTGGAT...............................................................................................................................................................................................19200.2040400000000
...............................................................................................................................................CAGGAACAGAACCGCCGTACTCG...............................................................................................23200.2040400000000
....................................................AGTCCAGGAGCCGTGGATTGCGT..........................................................................................................................................................................................23200.2040400000000
......................................................................TGCGTCAGG---CAACTCTGTGGCCGGAC..................................................................................................................................................................26110.1820200000000
...................................................TAGTCCAGGAGCCGTGGATTGCGTCA........................................................................................................................................................................................26180.1730300000000
.......................................................................GCGTCAGG---CAACTCTGTGGC.......................................................................................................................................................................20120.1720100100000
......................................................................TGCGTCAGG---CAACTCTGTGGC.......................................................................................................................................................................21120.1720100000100
.......................................................................GCGTCAGG---CAACTCTGTGGCCGG....................................................................................................................................................................23120.1720200000000
................................................................................................................................................................TACTCGTACGGAAGGGAATCC................................................................................21190.1630300000000
........................................................................................................................................................................................................TTACAGCACGGATGACCTGACGGTGG...................................26130.1520200000000
..............................................................................................................................TACTCAACATCGGTAAGCAGGAA................................................................................................................23200.1530300000000
................................................................................................................................................AGGAACAGAACCGCCGTACTCG...............................................................................................22200.1530300000000
..................................................................................................................................................................................................................................TGA----TGCTGGAG-AGCGAGGAAAAGCG.....25200.1530200000010
..................................................................................................................................................................................................................................TGA----TGCTGGAG-AGCGAGGAAAAGC......24200.1530200000010
...........................................................................................................................CTCTACTCAACATCGGTAAGC.....................................................................................................................21200.1530300000000
...............................................................................................................................................................................................................................TGGTGA----TGCTGGAG-AGCGAGGAAAAG.......26140.1420200000000
...........................................................GAGCCGTGGATTGCGTCAGG---CAACT..............................................................................................................................................................................25160.1320200000000
...............................................................................................................................................................GTACTCGTACGGAAGGGAATCCATGC............................................................................26160.1320000000200
...................................................TAGTCCAGGAGCCGTGGATTGCGTCAGG---...................................................................................................................................................................................28180.1120200000000
.....................................................GTCCAGGAGCCGTGGATTGCGTCA........................................................................................................................................................................................24190.1120200000000
.............................................................................................................................CTACTCAACATCGGTAAGCAGGAACA..............................................................................................................26200.1020000000200
.............................................................................................................................CTACTCAACATCGGTAAGCAGGAACAG.............................................................................................................27200.1020000101000
...............................................................................................................................................CAGGAACAGAACCGCCGTACTCGTA.............................................................................................25200.1020200000000
...................................................TAGTCCAGGAGCCGTGGATTGCC...........................................................................................................................................................................................23200.1020200000000
...................................................TAGTCCAGGAGCCGTGGATA..............................................................................................................................................................................................20200.1020200000000
...........................................................................CAGG---CAACTCTGTGGCCGGACTAAAG.............................................................................................................................................................26100.1010000000100
....................................................................................................AAAGTCCTC-AAATTACAACC............................................................................................................................................20100.1010100000000
...........................................................................................................................................TAAGCAGGAACAGAACCGCCGTACTCG...............................................................................................27200.1020200000000
.............................................................................................................................................................................................CTTATGTCTCATTACAGCACGG..................................................22200.1020200000000
.......................................................................................................................................................................ACGGAAGGGAATCCATGCTCATCT......................................................................24200.1020200000000
.........................................................................................................................TTCTCTACTCAACATCGGTAAGCA....................................................................................................................24200.1020200000000
...............................................................................................................................................CAGGAACAGAACCGCCG.....................................................................................................17200.1020000000200
..............................................................................................................................................GCAGGAACAGAACCGCCGTAC..................................................................................................21200.1020100000010
..........................................................................TCAGG---CAACTCTGTGGCCGGACTAAAG.............................................................................................................................................................27100.1010000000010
...................................................TAGTCCAGGAGCCGTGGATTGCA...........................................................................................................................................................................................23200.1020200000000
......................................................................................................................................................................TACGGAAGGGAATCCATGCTCATCTT.....................................................................26200.1020200000000
..................................................................................................................................CAACATCGGTAAGCAGGAAC...............................................................................................................20200.1020100000010
......................................................................................................................................................................TACGGAAGGGAATCCATGCTCATC.......................................................................24200.1020200000000
.........................................................................................................................................................................................................TACAGCACGGATGACCTGACGG......................................22200.1020200000000
............................................................................................................................................................................................................AGCACGGATGACCTGACGGTGGTG.................................24100.1010100000000
.................................................................................................................................................................................................TGTCTCATTACAGCACGGATGACCTGA.........................................27200.1020200000000
..........................................................................................................................TCTCTACTCAACATCGGTAAGCAGG..................................................................................................................25200.1020200000000
..................................................................................................................................................................................................................................TGA----TGCTGGAG-AGCGAGGAAAA........22200.1020200000000
...............................................................................................................................................CAGGAACAGAACCGCCGTACTC................................................................................................22200.1020200000000
...........................................................................................................................CTCTACTCAACATCGGTAAGCAGGA.................................................................................................................25200.1020200000000
.................................................................................................................................................................................................TGTCTCATTACAGCACGGATGACC............................................24200.1020000002000
............................................................................AGG---CAACTCTGTGGCCGGAC..................................................................................................................................................................20110.0910100000000
.......................................................................GCGTCAGG---CAACTCTGTGGCCGGAC..................................................................................................................................................................25110.0910100000000
..........................................................................TCAGG---CAACTCTGTGGCCGGAC..................................................................................................................................................................22110.0910100000000
..............................................................................G---CAACTCTGTGGCCGGACTAAAGTCCTC-A......................................................................................................................................................29110.0910010000000
............................................................................AGG---CAACTCTGTGGCCGGACTA................................................................................................................................................................22110.0910000000100
........................................................................................TGTGGCCGGACTAAAGTCCTC-AAATTAA................................................................................................................................................28110.0910100000000
.......................................................................................................................................................................................................................CCTGACGGTGGTGA----TGCTGGA.....................21120.0810100000000
.......................................................................................................................................................................................................................CCTGACGGTGGTGA----TGCTGG......................20120.0810100000000
....................................................................................................................................................................................................................TGACCTGACGGTGGTGA----TGCTGGAG-...................25120.0810100000000
........................................................................................................................................................................................................................CTGACGGTGGTGA----TGCTGGA.....................20120.0810100000000
.......................................................................GCGTCAGG---CAACTCTGTGGCC......................................................................................................................................................................21120.0810100000000
...................................................................GATTGCGTCAGG---CAACTCTGTGG........................................................................................................................................................................23130.0810100000000
...................................................................................................................................................................................................................ATGACCTGACGGTGGTGA----TG..........................20130.0810100000000
......................................................................................................................................................................................................CATTACAGCACGGATGACCTGACGGTGG...................................28130.0810100000000
............................................................................................................................................................................................................................CGGTGGTGA----TGCTGGAG-AGC................20130.0810100000000
...................................................................GATTGCGTCAGG---CAACTCTGTG.........................................................................................................................................................................22130.0810100000000
.................................................................TGGATTGCGTCAGG---CAACTCTGTGG........................................................................................................................................................................25130.0810100000000
.........................................................................................................................................................................................................................TGACGGTGGTGA----TGCTGGAG-AGCGAA.............26130.0810000001000
....................................................................ATTGCGTCAGG---CAACTCTGTGG........................................................................................................................................................................22130.0810100000000
.........................................................................................................................................................................................................TACAGCACGGATGACCTGACGGTGGT..................................26130.0810100000000
.......................................................................GCGTCAGG---CAACTCTGTGG........................................................................................................................................................................19130.0810100000000
..............................................................................................................................................................................................................CACGGATGACCTGACGGTG....................................19130.0810000000010
...............................................................................................................................................................................................................................TGGTGA----TGCTGGAG-AGCGAGG............21140.0710000000100
...............................................................................................................................................................................................................................TGGTGA----TGCTGGAG-AGCGAGGAAA.........24140.0710100000000
......................................................................................TCTGTGGCCGGACTAAAGTCCTC-AA.....................................................................................................................................................25140.0710100000000
................................................................................................................................................................................................................................GGTGA----TGCTGGAG-AGCGAGGA...........21140.0710100000000
..............................................................................................................................................................CGTACTCGTACGGAAGGGAATCCATGC............................................................................27160.0610100000000
.................................................................................................................................................................ACTCGTACGGAAGGGAATCCATGC............................................................................24160.0610100000000
...........................................................GAGCCGTGGATTGCGTCAGG---CAACTC.............................................................................................................................................................................26160.0610100000000
................................................................................................................................................................TACTCGTACGGAAGGGAATCCAT..............................................................................23170.0610100000000
..............................................................CCGTGGATTGCGTCAGG---CAACTC.............................................................................................................................................................................23180.0610100000000
...................................................................................................................................................................TCGTACGGAAGGGAATCCATGC............................................................................22180.0610100000000
......................................................TCCAGGAGCCGTGGATTGCGTCAGG---C..................................................................................................................................................................................26180.0610100000000
...................................................................................................................................................................TCGTACGGAAGGGAATCCATG.............................................................................21180.0610100000000
...........................................................................................................................CTCTACTCAACATCGGTAAGCAGGAACA..............................................................................................................28190.0510100000000
..............................................................................................................................................................CGTACTCGTACGGAAGGGAAT..................................................................................21190.0510100000000
................................................................................................................................................................TACTCGTACGGAAGGGAAT..................................................................................19190.0510100000000
................................................................................................................................................................TACTCGTACGGAAGGGAATC.................................................................................20190.0510000000100
...............................................................................................................................................................GTACTCGTACGGAAGGGAATCC................................................................................22190.0510100000000
...........................................................................................................................................................CGCCGTACTCGTACGGAAGGGA....................................................................................22190.0510100000000
.........................................................................................................................................................ACCGCCGTACTCGTACGGAAGGGA....................................................................................24190.0510100000000
..............................................................................................................................................................CGTACTCGTACGGAAGGGAATC.................................................................................22190.0510100000000
....................................................AGTCCAGGAGCCGTGGATTGCGTCAG.......................................................................................................................................................................................26190.0510100000000
................................................................................................................................................................TACTCGTACGGAAGGGAATA.................................................................................20190.0510000000010
................................................................................................................................................................TACTCGTACGGAAGGGAATCCA...............................................................................22190.0510100000000
...................................................................................................................................................................TCGTACGGAAGGGAATCCATC.............................................................................21190.0510000001000
...........................................................................................................................CTCTACTCAACATCGGTAAGCA....................................................................................................................22200.0510100000000
............................................................................................................................TCTACTCAACATCGGTAAGCAGGAACA..............................................................................................................27200.0510100000000
............................................................................................................................................................................................................................................TGGAG-AGCGAGGAAAAGC......18200.0510100000000
.................................................................................................................................................................................................TGTCTCATTACAGCACGGATGAT.............................................23200.0510100000000
......................................................................................................................................ATCGGTAAGCAGGAACAGAACCGCC......................................................................................................25200.0510000000100
.....................................................GTCCAGGAGCCGTGGATTGCGT..........................................................................................................................................................................................22200.0510100000000
...................................................TAGTCCAGGAGCCGTGGATT..............................................................................................................................................................................................20200.0510000000100
...........................................................................................................................................TAAGCAGGAACAGAACCGCCGTAC..................................................................................................24200.0510100000000
..............................................................................................................................................GCAGGAACAGAACCGCCG.....................................................................................................18200.0510000000100
...................................................TAGTCCAGGAGCCGTGGATTGA............................................................................................................................................................................................22200.0510100000000
.............................................................................................................................................AGCAGGAACAGAACCGCCGTAC..................................................................................................22200.0510100000000
...............................................................................................................................................CAGGAACAGAACCGCCGTACTCGTACGG..........................................................................................28200.0510100000000
.................................................................................................................................TCAACATCGGTAAGCAGGAACAG.............................................................................................................23200.0510100000000
.................................................................................................................................................................................................TGTCTCATTACAGCACGGATGA..............................................22200.0510000100000
..................................................................................................................................................................................................................................TGA----TGCTGGAG-AGCGAGGAAA.........21200.0510100000000
...............................................................................................................................................CAGGAACAGAACCGCCGTAC..................................................................................................20200.0510100000000
............................................................................................................................................AAGCAGGAACAGAACCGCCGTACTCG...............................................................................................26200.0510100000000
...............................................................................................................................................CAGGAACAGAACCGCCGTACTCGTACG...........................................................................................27200.0510100000000
....................................................AGTCCAGGAGCCGTGGATTGCGTT.........................................................................................................................................................................................24200.0510100000000
........................................................................................................................................................................................................TTACAGCACGGATGACCTGACGGT.....................................24200.0510000001000
...................................................TAGTCCAGGAGCCGTGGATTGCGTT.........................................................................................................................................................................................25200.0510100000000
............................................................................................................................TCTACTCAACATCGGTAAGCAGGAAC...............................................................................................................26200.0510100000000
................................................................................................................................................AGGAACAGAACCGCCGTACTCGTACG...........................................................................................26200.0510100000000
...............................................................................................................................ACTCAACATCGGTAAGCAGGAA................................................................................................................22200.0510100000000
.........................................................................................................................TTCTCTACTCAACATCGGTAAGCAGGA.................................................................................................................27200.0510100000000
..................................................................................................................................CAACATCGGTAAGCAGGAACAGAACCGC.......................................................................................................28200.0510100000000
................................................................................................................................................AGGAACAGAACCGCCGTACTCGTAC............................................................................................25200.0510100000000
........................................................................................................................................CGGTAAGCAGGAACAGAACCGCCG.....................................................................................................24200.0510100000000
.................................................................................................................................................................................ATCCATGCTCATCTTATGTC................................................................20200.0510100000000
....................................................................................................................................................................................................................................A----TGCTGGAG-AGCGAGGAAAAGC......22200.0510000000100
................................................................................................................................................................TACTCGTACGGAAGGGAAA..................................................................................19200.0510100000000
......................................................TCCAGGAGCCGTGGATTGCGT..........................................................................................................................................................................................21200.0510100000000
....................................................................................................................................................................CGTACGGAAGGGAATCCATGC............................................................................21200.0510100000000
.................................................................................................................................................GGAACAGAACCGCCGTACTCGTA.............................................................................................23200.0510100000000
....................................................................................................................................................................................................CTCATTACAGCACGGATGACC............................................21200.0510001000000
..........................................................................................................................................................................................................................................GCTGGAG-AGCGAGGAAAAGC......20200.0510100000000
.....................................................................................................................................................................GTACGGAAGGGAATCCAT..............................................................................18200.0510100000000
.................................................................................................................................................GGAACAGAACCGCCGTACTC................................................................................................20200.0510100000000
..............................................................................................................................................................................................TTATGTCTCATTACAGCACGG..................................................21200.0510000000010
....................................................................................................................................................................................................................................A----TGCTGGAG-AGCGAGGAA..........18200.0510100000000
...........................................................................................................................................................................................................CAGCACGGATGACCTGACGG......................................20200.0510000000010
...............................................................................................................................................................GTACTCGTACGGAAGGGAA...................................................................................19200.0510100000000
..............................................................................................................................................................CGTACTCGTACGGAAGGG.....................................................................................18200.0510100000000
....................................................................................................................................ACATCGGTAAGCAGGAACAGAACC.........................................................................................................24200.0510000000010
.............................................................................................................................................................................................CTTATGTCTCATTACAGCACGGA.................................................23200.0510100000000
.................................................................................................................................................................................................TGTCTCATTACAGCACGGATGACCTT..........................................26200.0510100000000
....................................................AGTCCAGGAGCCGTGGATTGA............................................................................................................................................................................................21200.0510100000000
.........................................................AGGAGCCGTGGATTGCGTCAGG---...................................................................................................................................................................................22200.0510100000000
................................................................................................................................................AGGAACAGAACCGCCG.....................................................................................................16200.0510000000100
.......................................................CCAGGAGCCGTGGATTGCGTC.........................................................................................................................................................................................21200.0510000001000
..................................................TTAGTCCAGGAGCCGTGGA................................................................................................................................................................................................19200.0510100000000
..........................................................................................................................TCTCTACTCAACATCGGTAAGCAG...................................................................................................................24200.0510100000000
........................................................................................................................................................................................................TTACAGCACGGATGACCTGAC........................................21200.0510100000000
.............................................................................................................................CTACTCAACATCGGTAAGCAGGAC................................................................................................................24200.0510010000000
...................................................................................................................................................................................................................................GA----TGCTGGAG-AGCGAGGAAAAG.......22200.0510100000000
droPer2
GC-CATGGAGAGAGGGTCCGCCGACATAGGGACAAGGGCCCGTGCAAACTTTAGTCCAGGAGCCGTGGATTGCGTCAGG---CAACTCTGTGGCCGGACTAAAGTCCTC-AAATTACAACCTTCTCTACTCAACATCGGTAAGCAGGAACAGAACCGCCGTACTCGTACGGAAGGGAATCCATGCTCATCTTATGTCTCATTACAGCACGGATGACCTGACGGTGGTGA----TGCTGGAG-AGCGAGGAAAAGCGACTAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................TGCGTCAGG---CAACTCTGTGG........................................................................................................................................................................20200.357070000
......................................................................TGCGTCAGG---CAACTCTGTGGCCGGAC..................................................................................................................................................................26200.357061000
................................................CTTTAGTCCAGGAGCCGTGGATT..............................................................................................................................................................................................23200.255050000
...................................................TAGTCCAGGAGCCGTGGATTGCGT..........................................................................................................................................................................................24200.153030000
.......................................................................GCGTCAGG---CAACTCTGTGGCCGGAC..................................................................................................................................................................25200.102020000
..............................................................................................................................................................................................TTATGTCTCATTACAGCACGGATGA..............................................25200.102020000
......................................................................TGCGTCAGG---CAACTCTGTGGCCG.....................................................................................................................................................................23200.102020000
......................................................................TGCGTCAGG---CAACTCTGTGGCCGG....................................................................................................................................................................24200.051100000
...............................................................CGTGGATTGCGTCAGG---CAAA...............................................................................................................................................................................20200.051010000
........................................................................CGTCAGG---CAACTCTGTGG........................................................................................................................................................................18200.051010000
...........................................................................................................................................TAAGCAGGAACAGAACCGCCGTA...................................................................................................23200.051100000
......................................................................TGCGTCAGG---CAACTCTGTG.........................................................................................................................................................................19200.051010000
.....................................................................TTGCGTCAGG---CAACTCTGTGGCC......................................................................................................................................................................23200.051010000
....................................................AGTCCAGGAGCCGTGGATTGCGTCA........................................................................................................................................................................................25200.051010000
....................................................AGTCCAGGAGCCGTGGATTGCGT..........................................................................................................................................................................................23200.051010000
...........................................................................................................................................TAAGCAGGAACAGAACCGCC......................................................................................................20200.051100000
...................................................TAGTCCAGGAGCCGTGGATTGCGTC.........................................................................................................................................................................................25200.051010000
..............................................................................................................................................................................................TTATGTCTCATTACAGCACGGAT................................................23200.051000001
....................................................AGTCCAGGAGCCGTGGATTGC............................................................................................................................................................................................21200.051010000
......................................................................TGCGTCAGG---CAACTCTGTGGCCGGA...................................................................................................................................................................25200.051010000
..................................................................................................................................................................................................................................TGA----TGCTGGAG-AGCGAGGAAA.........21200.051000001
.......................................................................GCGTCAGG---CAACTCTGTGGCCGG....................................................................................................................................................................23200.051010000
....................................................AGTCCAGGAGCCGTGGATTGCGTCAG.......................................................................................................................................................................................26200.051010000
droWil2
AC-CCTGGAGGAGGATGCCAGCGACGTCG-------------------CTCTAGTCCAGAAACCG---------TCAGG---CAACACGGTTTCCGGGCTGAGATCATC-T----TTTATCTCTTATACCACACCACAGTAAGAAGAACCAGAACGGCCGTCATGGTACGCAAAGGACTACATGCTTATATAATTTCTCAAAAAAGCACCGATGACCTCACAGTTGTAG----CAATTGAA-GGCACCAGCCACCGCATTCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droGri2
CG-CCTGGCCGGAGGCGGAGACGACATAG-------------------TACTAGTCCAAGAACCTTGGGTGATTG---GAGGAA---AGGTTTGTGGACTAGGAAACAA-AAATTACAAGCTCTTAGTAGCTGGAAATGAAGGTAAAAAACGTACCTGCATCCTCGCGAAAAAACATCTAAATATTTTTCTGCTCCATAATTTTAGTAATGATGACAACACAGCGGTAA----GCCTGGAG-CTCCAGTCAGCTTCGGTAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
TG-GCTGAAGAT----GGAGCCGATATAG-------------------TCCTAGTTCAGGAACCTTGGATAGCAG---GAGGTA---GGGTTTCTAGACTAGCGGCCAA-GAAGTGCAAGCTTTTAGTAGTTAACACTGAAGGTAAAATTAGAGCCTGCATTTTAGCTTAAAAGCACCTTAGCATATTAATGCTCCATAAATACAGCAACGAAGACAATATGGCAGCCA----CTTTGGAG-TCG-----CAAACGACTCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CCACCTCGCCGAGAGTGGAGCTGATGTGG-------------------CCTTCATCCAGGAACCCTGGATCCTTG---GAGACA---AGATTCTTGGGCTGGGGGCATC-GGAGTTTAGGCTCTGCAAAGCCGATACTACAGGTAA----AA-AGCTGCATTCTCGCAAAAAAGAACCTTAACCTCTTTTTGCTACCCAATTTCAGCAATGAAGACCACGTCGCCGCAG----CCATAGAG-AGCCCAAAGGGCCCTCTAASizeHit CountTotal NormTotal
No Reads
droKik1
GC-CATGGAGCAAGGATCCGCCGACATAG-------------------CTTTGGTCCAGGAGCCATGGATTGCCTCAGG---CAATGCCATCGCCGGACTGAAGTCCGCAAAATTACAATTTGCTCTATCCACCAACGGTAAGCAGGAATAGAACCGCCGTACTTGTACGGAAGGGTCTACACGCTAACCTTATGTCTCACTACAGCTCTGATGACCTGACCGTGGTGA----TGCTAGAG-AGCGGGAAAAAGCGCCTTTSizeHit CountTotal NormTotal
No Reads
droFic1
GC-CATGGTGTAAGCGCCCATCGTC------------------------------------GCTATAGGTCACCCCGCA---CAATGCCGCAGCCGGACTGAAGACCTC-AAGTTACAACAATTTCATTTCAGCAGCGGTAAGCAGGAACAGAAACCC-----------AGGAGGCTATCCATGCTAATTCAATGCCTTATTACAGCTCTTACGACCTGACTGTGGTGA----TGCTGGAA-AGCAAGGAGAAACGG-TAGSizeHit CountTotal NormTotal
No Reads
droEle1
GC-CCTACATCAGGGATCCTTTGACATAG-------------------C-----TCCAGGAGCAATGGATTGCCTCAGG---CAATTCCGTGGTCGGACAAAAGTCCTC-AAATTACAACCCACTCTACTCACTATCGGTAAGCAGGAACATGACTACCATCCTAGTGAGGAAGGGTATCCACGCTAACCTTATGTCTCGTTACAGCTTTGATGACGTCACTGTCGAGA----TGCTAGAG-ACCGAGGAGAAGCACCTTCSizeHit CountTotal NormTotal
No Reads
droRho1
CG-CCTGGCCAAAGGCGAAGCCGACGTGG-------------------TCTTAGTTCAGGAACCCTGG-TAGC-A---GAGGCA---GGGTTGCTGGACTGGGAACAAA-AGACTACAAGCTTATGCATGACCCCAAACAAGGTAAAATTCGAACCTGCATTTTAGCCAAACGGCGTCTTAGTACATTTCTGCTTCACAAATACAGCAACGGAGACAACACAGCAATAA----GCCTGGAG-CT----GCAAAGCGGCTCTSizeHit CountTotal NormTotal
No Reads
droBia1
GC-CTTGGAGCAGGGAACCTTCGACATAG-------------------CCTTGGTTCAAGAGCCATGAATTGCCTC-GG---CAGTATCGTTGCCGGTCTAAGGTCTTC-AAACTACAATACATTATACTCACCAACTGTATGTAGGAACAGAAGCGCCGTACTTGTGTGGAAGGG------------CCTTATGCCTCATCACACCTCTGATGACTTCATTACTGTGA----TGCTAGAA-AGCAAGGGGCAGCGTCTTTSizeHit CountTotal NormTotal
No Reads
droTak1
GC-CCTAGAGCAAGGACCCGTCGACATAG-------------------CCTTGGTTCAAGAGCCATGGATTGCCTCGGG---CAATATCGTGGCCGGACTAAGGTCCTC-AAACTACAATACATTCTACTCACCAACGGTAAGCAGGAACAGAAGCGCCGTACTTGTGCGGAAGGGTATCCATGCTAACCTTATGCCTCATTACAGCTCTGACGACTTGACTGCGGTGA----TGCTAGAA-AGCGAGGAGCAGCGCCTCTSizeHit CountTotal NormTotal
No Reads
droSim2
--------------------------------------------------------------------ATTGTCTCGGG---CAATCCCGTCGCTGGACTAAAGTCCTC-CATTTACAACCTGTTCTATACACCATCGGTAAGCAGAAACAGAGCCGCCGTACTTGTTCG-----GCCTGCATGCTAACCTTATGTCTCATTACAGCACTGATGACCTGGCTGTTGTGA----TGCTAGAG-AGCGAGAGGAATCGCCTTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
AT-ACTT---------------------------------------------------------ATAGAATATCTCACG---CGGGACTGT-------------------------------------------------------------------------------------------------------------------------TTACC-GATCGTGATGGAAGATGTGGGAGCA-----GCCAAGAAGACTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................TGT-------------------------------------------------------------------------------------------------------------------------TTACC-GATCGTGATGGAAGATG..........................2511.0010010
.....................................................................................................................................................................................................................TACC-GATCGTGATGGAAGATGTGGGAGC...................2811.0010100
..................................................................................................................................................................................................................................TGGAAGATGTGGGAGCA-----GCCAAGA......2411.0011000
....................................................................................................................................................................................................................................GAAGATGTGGGAGCA-----GCCAAGAAGA...25200.0511000
....................................................................................................................................................................................................................................GAAGATGTGGGAGCA-----GCCAAGA......22200.0511000
....................................................................................................................................................................................................................................GAAGATGTGGGAGCA-----GCCAAGAAG....24200.0510010
......................................................................................................................................................................................................................................AGATGTGGGAGCA-----GCCAAGAA.....21200.0511000
droYak3
GC-CCTGGAGCAAGGGTCCGCCGACATAG-------------------CTTTGGTCCAAGAGCCATGGATTGCCTCGGG---CAATGCCGTCGCCTGACTAAAGTCCTC-CAATTACAACCTGTTCTATACACCATTGGTAAGCAGAAACAGAGCCGCCGTACTTGTACGGAAGGGCCTGCATGCTAACCTTATGTCTCATTACAGCACGGATGACATGACTGTTGTGA----TGCTGGAA-AGCGAGATGAAGCGCCTTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................TGTCTCATTACAGCACGGATGACA............................................2422.00404000000000
...........................................................................................................................................................................................................................ACTGTTGTGA----TGCTGGAA-AGCGAGA............2512.00202000000000
...................................................TGGTCCAAGAGCCATGGATTGCCT..........................................................................................................................................................................................24131.2316016000000000
.................................................................................................................TTACAACCTGTTCTATACACCATTGG..........................................................................................................................2611.00101000000000
.................................................................................................................TTACAACCTGTTCTATACACCATT............................................................................................................................2411.00101000000000
.....................................................................................TGCCGTCGCCTGACTAAAGTCCTC-C......................................................................................................................................................2511.00101000000000
.................................................................................................................TTACAACCTGTTCTATACACCATTGGTA........................................................................................................................2811.00101000000000
.........................................................................................................................................................................................................................TGACTGTTGTGA----TGCTGGAA-AGCGAGA............2711.00101000000000
......................................................................TGCCTCGGG---CAATGCCGTCGCCTG....................................................................................................................................................................2411.00100100000000
...................................................TGGTCCAAGAGCCATGGATTGCC...........................................................................................................................................................................................23130.69909000000000
...........................................................................................................TC-CAATTACAACCTGTTCTATACACCA..............................................................................................................................2730.67202000000000
................................................................................................................................................AGAAACAGAGCCGCCGTACTTGTACG...........................................................................................2630.33101000000000
.................................................................................................................................................GAAACAGAGCCGCCGTACTTGTACGGA.........................................................................................2730.33100000010000
...................................................TGGTCCAAGAGCCATGGATTGCCTC.........................................................................................................................................................................................25130.31404000000000
...........................................................................................................................................TAAGCAGAAACAGAGCCGCCGTACTTG...............................................................................................2750.20101000000000
................................................................................................................................................................TACTTGTACGGAAGGGCCTGCATGCTT..........................................................................2760.17101000000000
...................................................TGGTCCAAGAGCCATGGATTGCCTCG........................................................................................................................................................................................26120.17202000000000
...............................................................................................................................................CAGAAACAGAGCCGCCGTACT.................................................................................................2170.14101000000000
.........................................................................................................................................GGTAAGCAGAAACAGAGCCGCCGTA...................................................................................................2570.14101000000000
.................................................................................................................TTACAACCTGTTCTATACACCA..............................................................................................................................2280.13101000000000
.................................................................................................................TTACAACCTGTTCTATACACCAT.............................................................................................................................2380.13101000000000
..............................................................................................................................................................................................TTATGTCTCATTACAGCACGGATGA..............................................2580.13101000000000
.....TGGAGCAAGGGTCCGCCGACATAG-------------------CT...................................................................................................................................................................................................................2690.11101000000000
..............................................................................................................................................................................................TTATGTCTCATTACAGCACGGAT................................................2390.11101000000000
........................................................................................................................................................................CGGAAGGGCCTGCATGCTAACC.......................................................................2290.11101000000000
..............................................................................................................................................................................................TTATGTCTCATTACAGCACG...................................................20100.10101000000000
......................................................TCCAAGAGCCATGGATTGCCTCGGG---C..................................................................................................................................................................................26100.10101000000000
....................................................GGTCCAAGAGCCATGGATTGCCTCG........................................................................................................................................................................................25120.08101000000000
...........................................................GAGCCATGGATTGCCTCGGG---CAATTA.............................................................................................................................................................................26120.08101000000000
................................................................................................................................................................................................ATGTCTCATTACAGCACGGATGAC.............................................24120.08101000000000
...................................................TGGTCCAAGAGCCATGGATTGC............................................................................................................................................................................................22130.08100100000000
....................................................GGTCCAAGAGCCATGGATTGCCT..........................................................................................................................................................................................23130.08101000000000
...................................................TGGTCCAAGAGCCATGGATTGCCA..........................................................................................................................................................................................24130.08101000000000
....................................................GGTCCAAGAGCCATGGATTGCCTC.........................................................................................................................................................................................24130.08101000000000
....................................................GGTCCAAGAGCCATGGATTGCCTCT........................................................................................................................................................................................25130.08101000000000
....................................................GGTCCAAGAGCCATGGATT..............................................................................................................................................................................................19150.07101000000000
................TCCGCCGACATAG-------------------CTTTGGTCCAAG.........................................................................................................................................................................................................25170.06101000000000
..................CGCCGACATAG-------------------CTTTGGTCCAAGAGC......................................................................................................................................................................................................26170.06100000100000

Generated: 05/17/2015 at 11:39 PM