ID:

dps_892

 Coordinate:

2:30745658-30745682 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-0.6 -0.4 -0.2

Flybase annnotation

intron [Dpse\GA27598-in]; exon [dpse_GLEANR_6536:2]; exon [dpse_GLEANR_6536:1]; CDS [Dpse\GA27598-cds]; CDS [Dpse\GA27598-cds]

Repeatable elements

NameClassFamilyStrand
Gypsy8-I_Dpse-intLTRGypsy+
mature
  1. Unknown_singleton_957:191-214 -
  2. XL_group3b:6930-6953 +
  3. Unknown_group_82:30715-30738 -
  4. Unknown_singleton_2344:2268-2291 -
  5. Unknown_group_91:15508-15531 +
  6. dps_892  2:30745659-30745682 +
  7. Unknown_group_749:11596-11619 +
  8. Unknown_group_223:471-494 -
  9. Unknown_group_486:11980-12003 -
  10. Unknown_group_667:13459-13482 +
  11. Unknown_singleton_536:990-1013 -
  12. Unknown_singleton_1147:444-467 +
  13. Unknown_singleton_1923:1217-1240 +
star

Sense Strand Reads

##################################################-------------------------##################################################
TCTCGTCAGCGACGGGCGTCCGTGCTCTCGCATGGCGACGAGGAGGATTGGTGCGATGGCTCCCAGTTCCTCCAGCTGTTGGCCTCGCCGTTGGTATCGCCGGGTATCCTCGGACGAGGGGGCCG
**************************************************..((....))...............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 V112
male body		 GSM343916
embryo
 SRR902011
testis
 GSM444067
head
 M062
head
 SRR902012
CNS imaginal disc
.......................................................................CCAGCTGTTGGCCTCGCCGTTGG............................... 23 0 1 125.00 125 124 0 1 0 0 0 0 0 0
.......................................................................CCAGCTGTTGGCCTCGCCGTTG................................ 22 0 1 91.00 91 91 0 0 0 0 0 0 0 0
.......................................................................CCAACTGTTGGCCTCGCCGTTGG............................... 23 1 2 33.00 66 66 0 0 0 0 0 0 0 0
.......................................................................CCAACTGTTGGCCTCGCCGTTG................................ 22 1 2 22.50 45 45 0 0 0 0 0 0 0 0
........................................................................CAGCTGTTGGCCTCGCCGTTGG............................... 22 0 1 13.00 13 13 0 0 0 0 0 0 0 0
.......................................................................CCAGCTGTTGGCCTCGCCGTTGGT.............................. 24 0 1 13.00 13 13 0 0 0 0 0 0 0 0
........................................................................CAGCTGTTGGCCTCGCCGTTG................................ 21 0 1 12.00 12 12 0 0 0 0 0 0 0 0
.......................................................................CCAGCTGTTGGCCTCGCCGTT................................. 21 0 8 8.38 67 63 2 1 0 1 0 0 0 0
.......................................................................CCAACTGTTGGCCTCGCCGTTGGT.............................. 24 1 2 7.50 15 15 0 0 0 0 0 0 0 0
.......................................................................CCAGCTGTTGGCCTCGCCGTTGGTA............................. 25 0 1 7.00 7 7 0 0 0 0 0 0 0 0
.......................................................................CCAGCTGTTGGCCTCGCCGT.................................. 20 0 8 5.00 40 36 2 1 0 1 0 0 0 0
.......................................................................CCAACTGTTGGCCTCGCCGTTGGTA............................. 25 1 2 4.00 8 8 0 0 0 0 0 0 0 0
.......................................................................CCAGCTGTTGGCCTCGCCG................................... 19 0 8 3.25 26 26 0 0 0 0 0 0 0 0
.......................................................................CCAGCTGTTGGCCTCGCCGTTGA............................... 23 1 1 3.00 3 3 0 0 0 0 0 0 0 0
........................................................................CAACTGTTGGCCTCGCCGTTGG............................... 22 1 2 3.00 6 6 0 0 0 0 0 0 0 0
........................................................................CAGCTGTTGGCCTCGCCGTTGGT.............................. 23 0 1 3.00 3 3 0 0 0 0 0 0 0 0
.......................................................................CCAGCTGTTGGCCTCGCCGTTGT............................... 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0
......................................................................TCCAGCTGTTGGCCTCGCCGTTG................................ 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0
........................................................................CAACTGTTGGCCTCGCCGTTG................................ 21 1 2 1.50 3 3 0 0 0 0 0 0 0 0
.......................................................................CCAGCTGTTGGCCTCGCC.................................... 18 0 8 1.38 11 11 0 0 0 0 0 0 0 0
.......................................................................CCAGCTGTTGGCCTCGCCTTTGG............................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................CCAGCTGTTGGCCTCGCCGTTGAAA............................. 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................CTGTTGGCCTCGCCGTTGGTA............................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................CCAGCTGTTGGCCTCGCCGTTGGTAT............................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................TCCAGCTGTTGGCCTCGCCGTTGGTA............................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................CCAGCTGTTGGCCTCGCCGTTGC............................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................AGCTGTTGGCCTCGCCGTTG................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................CCAGCTGTTGGCCTCGCCGTTGGC.............................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................TGTTGGCCTCGCCGTTGGTAT............................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................AGCTGTTGGCCTCGCCGTTGGTA............................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................CCAGCTGTTGGCCTCGCCGTTGGTATCG.......................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................CAGCTGTTGGCCTCGCCGT.................................. 19 0 8 0.63 5 5 0 0 0 0 0 0 0 0
.......................................................................CCAACTGTTGGTCTCGCCGTTGG............................... 23 2 2 0.50 1 1 0 0 0 0 0 0 0 0
........................................................................CAGCTGTTGGCCTCGCCGTT................................. 20 0 8 0.50 4 4 0 0 0 0 0 0 0 0
........................................................................CAACTGTTGGCCTCGCCGTTGGTA............................. 24 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.......................................................................CCAACTGTTGGCCTCGCCGTTGGTAT............................ 26 1 2 0.50 1 1 0 0 0 0 0 0 0 0
......................................................................TCCAACTGTTGGCCTCGCCGTTGGTAAA........................... 28 3 2 0.50 1 1 0 0 0 0 0 0 0 0
......................................................................TCCAACTGTTGGCCTCGCCGTTG................................ 23 1 2 0.50 1 1 0 0 0 0 0 0 0 0
...............................................................................TGGCCTCGCCGTTGGTATC........................... 19 0 2 0.50 1 0 0 1 0 0 0 0 0 0
.......................................................................CCAGCTGTTGGCCTCACCGTT................................. 21 1 8 0.50 4 3 1 0 0 0 0 0 0 0
........................................AGGAGGATTGGTGCGATGGC................................................................. 20 0 20 0.30 6 0 6 0 0 0 0 0 0 0
.....................................ACGAGGAGGATTGGTGCGATGGC................................................................. 23 0 20 0.30 6 3 3 0 0 0 0 0 0 0
.......................................................................CCAACTGTTGGCCTCGCCGTT................................. 21 1 17 0.29 5 5 0 0 0 0 0 0 0 0
........................................................................CAGCTGTTGGCCTCGCCG................................... 18 0 8 0.25 2 2 0 0 0 0 0 0 0 0
.......................................................................CCAGCTGTTGGCCTCACCGT.................................. 20 1 8 0.25 2 1 0 1 0 0 0 0 0 0
.....................................ACGAGGAGGATTGGTGCG...................................................................... 18 0 20 0.25 5 5 0 0 0 0 0 0 0 0
....................................................................CCTCCAGCTGTTGGCCTCGCCG................................... 22 0 8 0.25 2 2 0 0 0 0 0 0 0 0
...........................................................CTCCCAGTTCCTCCAGCTGTTGG........................................... 23 0 8 0.25 2 2 0 0 0 0 0 0 0 0
........................................AGGAGGATTGGTGCGATGGCTCC.............................................................. 23 0 20 0.25 5 4 0 0 1 0 0 0 0 0
.......................................................................CCAGCTGTTGGCCTCGCCGTTT................................ 22 1 8 0.25 2 2 0 0 0 0 0 0 0 0
...................................CGACGAGGAGGATTGGTGCG...................................................................... 20 0 20 0.25 5 2 3 0 0 0 0 0 0 0
................................................TGGTGCGATGGCTCCCAGTTCC....................................................... 22 0 20 0.20 4 4 0 0 0 0 0 0 0 0
.....................................ACGAGGAGGATTGGTGCGATGGCTC............................................................... 25 0 20 0.20 4 1 0 0 0 0 3 0 0 0
......................................................................................................GGTATCCTCGGACGAGGGGGC.. 21 0 5 0.20 1 1 0 0 0 0 0 0 0 0
..............................................................................TTGGCCTCGCCGTTGGTATCTC......................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0
...................................................TGCGATGGCTCCCAGTTCCTCCAG.................................................. 24 0 13 0.15 2 2 0 0 0 0 0 0 0 0
...................................................TGCGATGGCTCCCAGTTCCTCCAGC................................................. 25 0 13 0.15 2 2 0 0 0 0 0 0 0 0
................................TGGCGACGAGGAGGATTGGT......................................................................... 20 0 20 0.15 3 1 0 0 1 1 0 0 0 0
..............................................ATTGGTGCGATGGCTCCCAG........................................................... 20 0 20 0.15 3 3 0 0 0 0 0 0 0 0
.....................................ACGAGGAGGATTGGTGCGATGG.................................................................. 22 0 20 0.15 3 3 0 0 0 0 0 0 0 0
.........................................GGAGGATTGGTGCGATGGC................................................................. 19 0 20 0.15 3 2 1 0 0 0 0 0 0 0
.......................................GAGGAGGATTGGTGCGATGGC................................................................. 21 0 20 0.15 3 0 1 0 0 0 2 0 0 0
..........................................GAGGATTGGTGCGATGGCTCC.............................................................. 21 0 20 0.15 3 3 0 0 0 0 0 0 0 0
................................................TGGTGCGATGGCTCCCAGTTCCT...................................................... 23 0 20 0.15 3 3 0 0 0 0 0 0 0 0
................................TGGCGACGAGGAGGATTGGTGT....................................................................... 22 1 20 0.15 3 0 0 0 2 0 0 1 0 0
.........................................GGAGGATTGGTGCGATGGCT................................................................ 20 0 20 0.15 3 1 2 0 0 0 0 0 0 0
.................................................................................GCCTCGCCGTTGGTATCTCCGG...................... 22 1 7 0.14 1 1 0 0 0 0 0 0 0 0
TCTCGTCAGCGACGGGCGTCCGTGC.................................................................................................... 25 0 15 0.13 2 2 0 0 0 0 0 0 0 0
.....TCAGCGACGGGCGTCCGTGCTCTCG............................................................................................... 25 0 15 0.13 2 1 0 0 1 0 0 0 0 0
..TCGTCAGCGACGGGCGTCCGTGCTC.................................................................................................. 25 0 15 0.13 2 2 0 0 0 0 0 0 0 0
.....TCAGCGACGGGCGTCCGTGCTA.................................................................................................. 22 1 15 0.13 2 2 0 0 0 0 0 0 0 0
...............................................................CAGTTCCTCCAGCTGTTGGCCTCA...................................... 24 1 8 0.13 1 1 0 0 0 0 0 0 0 0
...................................................................TCCTCCAGCTGTTGGCCTCG...................................... 20 0 8 0.13 1 1 0 0 0 0 0 0 0 0
..................................................................TTCCTCCAGCTGTTGGCCT........................................ 19 0 8 0.13 1 1 0 0 0 0 0 0 0 0
............................................................TCCCAGTTCCTCCAGCTGTTGG........................................... 22 0 8 0.13 1 1 0 0 0 0 0 0 0 0
.......................................................................CCAGCTGTTGGCCTCACCGTTT................................ 22 2 8 0.13 1 1 0 0 0 0 0 0 0 0
......................................................................TCCAGCTGTTGGCCTCGC..................................... 18 0 8 0.13 1 1 0 0 0 0 0 0 0 0
......................................................................TCCAGCTGTTGGCCTCACCGTT................................. 22 1 8 0.13 1 1 0 0 0 0 0 0 0 0
...........................................................CTCCCAGTTCCTCCAGCTGTTGGC.......................................... 24 0 8 0.13 1 1 0 0 0 0 0 0 0 0
........................................................................CAGCTGTTGGCCTCACCGTT................................. 20 1 8 0.13 1 1 0 0 0 0 0 0 0 0
.......................................................................TCAGCTGTTGGCCTCGCCGTT................................. 21 1 8 0.13 1 1 0 0 0 0 0 0 0 0
............................................................TCCCAGTTCCTCCAGCTGTTGGT.......................................... 23 1 8 0.13 1 1 0 0 0 0 0 0 0 0
...................................................................TCCTCCAGCTGTTGGCCTCGCCGT.................................. 24 0 8 0.13 1 1 0 0 0 0 0 0 0 0
..................................................................TTCCTCCAGCTGTTGGCCTC....................................... 20 0 8 0.13 1 1 0 0 0 0 0 0 0 0
....................................................................CCTCCAGCTGTTGGCCTC....................................... 18 0 8 0.13 1 1 0 0 0 0 0 0 0 0
..................................................................TTCCTCCAGCTGTTGGCCTCG...................................... 21 0 8 0.13 1 1 0 0 0 0 0 0 0 0
.......................................................................CCAGCTGTTGGCCTCGCCT................................... 19 1 8 0.13 1 1 0 0 0 0 0 0 0 0
...........................................................CTCCCAGTTCCTCCAGCTGTTG............................................ 22 0 8 0.13 1 1 0 0 0 0 0 0 0 0
...............................................................CAGTTCCTCCAGCTGTTGGC.......................................... 20 0 8 0.13 1 1 0 0 0 0 0 0 0 0
.......................................................................CCATCTGTTGGCCTCGCCG................................... 19 1 8 0.13 1 1 0 0 0 0 0 0 0 0
...........................................................CTCCCAGTTCCTCCAGCTGTTGGCCTC....................................... 27 0 8 0.13 1 1 0 0 0 0 0 0 0 0
...................................................................TCCTCCAGCTGTTGGCCTCGC..................................... 21 0 8 0.13 1 1 0 0 0 0 0 0 0 0
.......................................................................CCAACTGTTGGCCTCGCCGT.................................. 20 1 17 0.12 2 2 0 0 0 0 0 0 0 0
.......................................................................CCAGCTGTTGTCCTCGCCG................................... 19 1 9 0.11 1 1 0 0 0 0 0 0 0 0
................................................TGGTGCGATGGCTCCCAGT.......................................................... 19 0 20 0.10 2 2 0 0 0 0 0 0 0 0
................................TGGCGACGAGGAGGATGGT.......................................................................... 19 2 20 0.10 2 0 0 0 0 0 2 0 0 0
...................................................TGCGATGGCTCCCAGTTCCT...................................................... 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0
................................................TGGTGCGATGGCTCCCAGTTCCTC..................................................... 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...........................................AGGATTGGTGCGATGGCTC............................................................... 19 0 20 0.10 2 0 2 0 0 0 0 0 0 0
................................TGGCGACGAGGAGGATTG........................................................................... 18 0 20 0.10 2 0 0 0 1 0 0 1 0 0
................................................TGGTGCGATGGCTCCCAGTTCAA...................................................... 23 2 20 0.10 2 2 0 0 0 0 0 0 0 0
............................................GGATTGGTGCGATGGCTCC.............................................................. 19 0 20 0.10 2 2 0 0 0 0 0 0 0 0
......................................CGAGGACGATTGGTGCGATT................................................................... 20 2 20 0.10 2 2 0 0 0 0 0 0 0 0
................................TGGCGACGAGGAGGATTGGTG........................................................................ 21 0 20 0.10 2 1 0 0 0 0 0 1 0 0
................................................TGGTGCGATGGCTCCCAGTTCCTCCA................................................... 26 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..........................................GAGGATTGGTGCGATGGCT................................................................ 19 0 20 0.10 2 0 2 0 0 0 0 0 0 0
................................................TGGTGCGATGGCTCCCAG........................................................... 18 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..............................................ATTGGTGCGATGGCTCCCAGTTC........................................................ 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0
................................TGGCGACGAGGAGGATTGGTGCGA..................................................................... 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...................................CGACGAGGAGGATTGGTGCGATGGC................................................................. 25 0 20 0.10 2 0 1 0 1 0 0 0 0 0
...................................CGACGAGGAGGATTGGTGCGATGG.................................................................. 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..........................................GAGGATTGGTGCGATGGC................................................................. 18 0 20 0.10 2 0 2 0 0 0 0 0 0 0
...........................................AGGATTGGTGCGATGGCT................................................................ 18 0 20 0.10 2 0 2 0 0 0 0 0 0 0
................................TGGCGACGAGGAGGATTGG.......................................................................... 19 0 20 0.10 2 1 0 0 0 0 0 1 0 0
.........................................................................................................ATCACCGGACGAGGTGGCCG 20 3 11 0.09 1 1 0 0 0 0 0 0 0 0
.....................................................................CTCCAGCTATTGGCCTCG...................................... 18 1 11 0.09 1 1 0 0 0 0 0 0 0 0
.....................................................................CTCCAGCTATTGGCCTCGC..................................... 19 1 11 0.09 1 0 0 1 0 0 0 0 0 0
...CGTCAGCGACGGGCGTCCGTT..................................................................................................... 21 1 15 0.07 1 1 0 0 0 0 0 0 0 0
.CTCGTCAGCGACGGGCGTCCGTGCTC.................................................................................................. 26 0 15 0.07 1 1 0 0 0 0 0 0 0 0
TCTCGTCAGCGACGGGCGTCCGTG..................................................................................................... 24 0 15 0.07 1 0 0 0 0 1 0 0 0 0
.....TCAGCGACGGGCGTCCGTGCT................................................................................................... 21 0 15 0.07 1 1 0 0 0 0 0 0 0 0
..TCGTCAGCGACGGGCGTCCGTGCTCT................................................................................................. 26 0 15 0.07 1 1 0 0 0 0 0 0 0 0
.....TCAGCGACGGGCGTCCGTGCTCTC................................................................................................ 24 0 15 0.07 1 1 0 0 0 0 0 0 0 0
.......AGCGACGGGCGTCCGTGCTCTCGC.............................................................................................. 24 0 16 0.06 1 1 0 0 0 0 0 0 0 0
.........CGACGGGCGTCCGTGCTCTC................................................................................................ 20 0 16 0.06 1 1 0 0 0 0 0 0 0 0
...................................................................TCCTCCAACTGTTGGCCTCGCCGT.................................. 24 1 17 0.06 1 1 0 0 0 0 0 0 0 0
..................................................................TTCCTCCAACTGTTGGCCTCGCCG................................... 24 1 17 0.06 1 1 0 0 0 0 0 0 0 0
.......................................................................CCAACTGTTGGCCTCGCCG................................... 19 1 17 0.06 1 1 0 0 0 0 0 0 0 0
..................................................................TTCCTCCAACTGTTGGCCTCGCCGT.................................. 25 1 17 0.06 1 1 0 0 0 0 0 0 0 0
.........................................................................AACTGTTGGCCTCGCCGTT................................. 19 1 17 0.06 1 1 0 0 0 0 0 0 0 0
.......AGCCACGGGCGTCCGTGCT................................................................................................... 19 1 17 0.06 1 1 0 0 0 0 0 0 0 0
........................................................................CAGCTGTTGGCCTCGCCA................................... 18 1 18 0.06 1 1 0 0 0 0 0 0 0 0
................................TTGCGACGAGGAGGATTGGTG........................................................................ 21 1 20 0.05 1 0 0 1 0 0 0 0 0 0
................................TGGCGACGAGGAGGATTGGTGCG...................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................CGATGGCTCCCAGTTCCTCC.................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................TTGGTGCGATGGCTCCCAGTTCCTC..................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................TGAGGATTGGTGCGATGGCTCCCA............................................................ 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..................................................GTGCGATGGCTCCCAGTT......................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0
................................TGGCGACGAGGAGGGTTGGTCC....................................................................... 22 2 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................TGCGATGGCTCCCAGTTCCTC..................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.................................GGCGACGAGGAGGATTGGTG........................................................................ 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................GTAGGTATCGCCGGCT.................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1
................................TGGCGACGAGGAGGATTGGTGCGAT.................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................GAGGAGGATTGGTGCGATGGCT................................................................ 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................GAGGAGGATTGGTGCGATGGCTCCCA............................................................ 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0
................................TGACGACGAGGAGGGTTGGTGT....................................................................... 22 3 20 0.05 1 0 0 0 0 0 0 1 0 0
.........................................GGAGGATTGGTGCGATGG.................................................................. 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.................................GGCGACGATGAGGATTGG.......................................................................... 18 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................CGAGGAGGATTGGTGCGATGGCTC............................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.................................................GGTGCGATGGCTCCCAGTTCCTCC.................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................GAGGATTGGTGCGATGGCTCCCAGT.......................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................CGAGGAGGATTGGTGCG...................................................................... 17 0 20 0.05 1 0 1 0 0 0 0 0 0 0
................................................TGGTGCGATGGCTCCCAGTG......................................................... 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.............................................GATTGGTGCGATGGCTCCCAG........................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................TTGGTGCGATGGCTCCCA............................................................ 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..............................................ATTGGTGCGATGGCTCCCAGTTCC....................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................GCCCGCATGGCGACAAGGA................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................GGAGGATTGGTGCGATGGCTCCCAGTTC........................................................ 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.................................GGCGACGAGGAGGATTGG.......................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................GGAGGATTGGTGCGATGGCTCCCA............................................................ 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........CCGACGATCGTCCGTGCTCT................................................................................................. 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................AGGAGGATTGGTGCGATGGCTC............................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
TCTCGTCAGCGACGGGCGTCC........................................................................................................ 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................CGAGGAGGATTGGTGCGATGG.................................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
................................TGGCCACGAGGAGGATTGGTG........................................................................ 21 1 20 0.05 1 0 1 0 0 0 0 0 0 0
....................................GACGAGGAGGATTGGTGCGATGG.................................................................. 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................GAGGAGGATTGGTGCGATGGCTCC.............................................................. 24 0 20 0.05 1 0 0 0 0 0 0 0 1 0
.........................................TGAGGATTGGTGCGATGGCTCCCAGT.......................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..............................................ATTGGTGCGATGGCTCCCAGT.......................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................GACGATGAGGATTGGTGCGATGG.................................................................. 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
................................TGGCGACGAGGAGGATTGGG......................................................................... 20 1 20 0.05 1 0 1 0 0 0 0 0 0 0
......................................CGAGGAGGATTGGTGCGATGGCT................................................................ 23 0 20 0.05 1 0 1 0 0 0 0 0 0 0
................................TGGCGACGAGGCGGATTG........................................................................... 18 1 20 0.05 1 0 0 0 1 0 0 0 0 0
..........................................GAGGATTGGTGCGATGGCTC............................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...CTCAAGCGACGGGCGTCCGT...................................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0
.............................................GGATGGTGCGATGGCTCCCA............................................................ 20 2 20 0.05 1 1 0 0 0 0 0 0 0 0
.........CGACGATCGTACGTGCTCT................................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0
TCTCGTCAGCGACGGGCGTC......................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................CGACGAGGATTGGTGCG...................................................................... 17 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.....................................ACGAGGAGGATTGGTGAA...................................................................... 18 2 20 0.05 1 0 1 0 0 0 0 0 0 0
........................................AGGAGGATTGGTGCGATGGCTCCC............................................................. 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..............................................ATTGGTGCGATGGCTCCCAGTTCCT...................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0
............................CGCATGGCTACGCGGATG............................................................................... 18 3 20 0.05 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

AGAGCAGTCGCTGCCCGCAGGCACGAGAGCGTACCGCTGCTCCTCCTAACCACGCTACCGAGGGTCAAGGAGGTCGACAACCGGAGCGGCAACCATAGCGGCCCATAGGAGCCTGCTCCCCCGGC
**************************************************..((....))...............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 V112
male body		 GSM343916
embryo
 M022
male body		 SRR902011
testis
 GSM444067
head
 M062
head
..........................................................CGAGGGTCAAGGAGGTCGACAAC............................................ 23 0 8 775.00 6200 4223 1776 98 58 32 7 2 2 2
...........................................................GAGGGTCAAGGAGGTCGACAAC............................................ 22 0 8 430.50 3444 3124 227 23 36 31 0 2 1 0
............................................................AGGGTCAAGGAGGTCGACAAC............................................ 21 0 8 350.38 2803 2308 409 15 28 40 0 2 1 0
........................................................ACCGAGGGTCAAGGAGGTCGACAAC............................................ 25 0 7 223.71 1566 1477 49 0 36 2 1 0 1 0
.........................................................CCGAGGGTCAAGGAGGTCGACAAC............................................ 24 0 8 187.50 1500 1226 234 23 10 2 1 0 1 3
.............................................................GGGTCAAGGAGGTCGACAAC............................................ 20 0 8 177.75 1422 1335 26 7 19 32 0 2 1 0
..............................................................GGTCAAGGAGGTCGACAAC............................................ 19 0 8 162.00 1296 1269 10 6 9 1 0 1 0 0
..........................................................CGAGGGTCAAGGAGGTCGACAA............................................. 22 0 8 53.00 424 382 38 0 0 1 1 2 0 0
..AGCAGTCGCTGCCCGCAGGCACGAG.................................................................................................. 25 0 15 49.87 748 748 0 0 0 0 0 0 0 0
AGAGCAGTCGCTGCCCGCAGGCACGAG.................................................................................................. 27 0 15 43.47 652 646 2 3 0 1 0 0 0 0
...........................................................GAGGGTCAAGGAGGTCGACAA............................................. 21 0 8 33.38 267 260 6 0 1 0 0 0 0 0
.GAGCAGTCGCTGCCCGCAGGCACGAG.................................................................................................. 26 0 15 32.47 487 476 0 8 0 3 0 0 0 0
.......................................................TACCGAGGGTCAAGGAGGTCGACAAC............................................ 26 0 7 28.71 201 142 49 1 7 1 0 0 1 0
...............................................................GTCAAGGAGGTCGACAAC............................................ 18 0 8 24.25 194 188 4 2 0 0 0 0 0 0
............................................................AGGGTCAAGGAGGTCGACAA............................................. 20 0 8 24.13 193 186 6 0 0 1 0 0 0 0
...........................................................AAGGGTCAAGGAGGTCGACAAC............................................ 22 1 8 22.13 177 176 0 1 0 0 0 0 0 0
........................................................ACCGAGGGTCAAGGAGGTCGACAA............................................. 24 0 7 19.14 134 133 0 0 1 0 0 0 0 0
.....................................................................GAGGTCGACAACCGGAGCGGCAACCAT............................. 27 0 1 19.00 19 18 0 1 0 0 0 0 0 0
.............................................................GGGTCAAGGAGGTCGACAA............................................. 19 0 8 14.63 117 113 2 0 1 1 0 0 0 0
..........................................................TGAGGGTCAAGGAGGTCGACAAC............................................ 23 1 8 14.50 116 108 3 2 1 2 0 0 0 0
.........................................................CCGAGGGTCAAGGAGGTCGACAA............................................. 23 0 8 13.38 107 105 2 0 0 0 0 0 0 0
..............................................................GGTCAAGGAGGTCGACAA............................................. 18 0 8 12.13 97 97 0 0 0 0 0 0 0 0
......................................................CTACCGAGGGTCAAGGAGGTCGACAAC............................................ 27 0 7 9.57 67 60 4 1 1 0 1 0 0 0
.......................................................................GGTCGACAACCGGAGCGGCAACCAT............................. 25 0 1 8.00 8 8 0 0 0 0 0 0 0 0
................................ACCGCTGCTCCTCCTAACCACGCT..................................................................... 24 0 20 7.30 146 136 1 7 1 1 0 0 0 0
..........................................................AGAGGGTCAAGGAGGTCGACAAC............................................ 23 1 8 6.88 55 51 3 1 0 0 0 0 0 0
........................................................................GTTGACAACCGGAGCGGCAACCAT............................. 24 1 2 6.50 13 11 0 2 0 0 0 0 0 0
...GCAGTCGCTGCCCGCAGGCACGAG.................................................................................................. 24 0 15 6.27 94 94 0 0 0 0 0 0 0 0
...........................................................................GACAACCGGAGCGGCAACCAT............................. 21 0 1 6.00 6 5 0 0 0 1 0 0 0 0
.............................................................AGGTCAAGGAGGTCGACAAC............................................ 20 1 8 5.75 46 44 0 0 1 1 0 0 0 0
..........................................................AAAGGGTCAAGGAGGTCGACAAC............................................ 23 2 8 5.00 40 40 0 0 0 0 0 0 0 0
............................................................TGGGTCAAGGAGGTCGACAAC............................................ 21 1 8 5.00 40 37 0 1 0 2 0 0 0 0
.................................CCGCTGCTCCTCCTAACCACGCT..................................................................... 23 0 20 5.00 100 92 0 6 1 0 0 0 0 1
............................................CCTAACCACGCTACCGAGGGTCAAG........................................................ 25 0 20 4.95 99 96 1 2 0 0 0 0 0 0
AGAGCAGTCGCTGCCCGCAGGCAC..................................................................................................... 24 0 15 4.60 69 56 11 1 0 0 0 1 0 0
..........................................................CGAGGGTCAAGGAGGTCGACAACC........................................... 24 0 8 4.50 36 19 16 0 0 0 0 0 1 0
..................................CGCTGCTCCTCCTAACCACGCT..................................................................... 22 0 20 4.50 90 89 0 0 1 0 0 0 0 0
.......................................................TACCGAGGGTCAAGGAGGTCGACAA............................................. 25 0 7 4.29 30 24 5 0 1 0 0 0 0 0
AGAGCAGTCGCTGCCCGCAGGCACGA................................................................................................... 26 0 15 4.27 64 64 0 0 0 0 0 0 0 0
.............................................................TGGTCAAGGAGGTCGACAAC............................................ 20 1 8 4.13 33 31 0 1 0 1 0 0 0 0
......................................................................AGGTCGACAACCGGAGCGGCAACCAT............................. 26 0 1 4.00 4 3 0 1 0 0 0 0 0 0
.....................................................................GAGGTTGACAACCGGAGCGGCAACCAT............................. 27 1 2 4.00 8 8 0 0 0 0 0 0 0 0
......................................GCTCCTCCTAACCACGCTACCGAGGGT............................................................ 27 0 20 3.40 68 68 0 0 0 0 0 0 0 0
........................................................TCCGAGGGTCAAGGAGGTCGACAAC............................................ 25 1 8 3.38 27 24 2 0 0 1 0 0 0 0
...........................................................CAGGGTCAAGGAGGTCGACAAC............................................ 22 1 8 2.88 23 19 0 4 0 0 0 0 0 0
...........................................................GAGGGTCAAGGAGGTCGACAACC........................................... 23 0 8 2.88 23 22 1 0 0 0 0 0 0 0
.........................................................CCGAGGGTCAAGGAGGTCGACAACC........................................... 25 0 8 2.88 23 9 14 0 0 0 0 0 0 0
..AGCAGTCGCTGCCCGCAGGCACGA................................................................................................... 24 0 15 2.87 43 43 0 0 0 0 0 0 0 0
..........................................................CGAGGGTCAAGAAGGTCGACAAC............................................ 23 1 8 2.75 22 20 1 0 1 0 0 0 0 0
............................................................AAGGTCAAGGAGGTCGACAAC............................................ 21 1 8 2.75 22 21 0 0 0 1 0 0 0 0
..........................................................CGAGGGTCAAGGAGGTCGACA.............................................. 21 0 8 2.63 21 20 0 1 0 0 0 0 0 0
............................................................AGGGTCAAGGAGGTCGACAACC........................................... 22 0 8 2.50 20 17 3 0 0 0 0 0 0 0
.............................................................GGGTCAAGGAGGTCGACAACC........................................... 21 0 8 2.38 19 18 0 0 0 1 0 0 0 0
..............................................................GGTCAAGGAGGTCGACAACC........................................... 20 0 8 2.38 19 16 2 0 0 1 0 0 0 0
.....................................................GCTACCGAGGGTCAAGGAGGTCGACAAC............................................ 28 0 7 2.29 16 10 4 0 2 0 0 0 0 0
............................................................................ACAACCGGAGCGGCAACCAT............................. 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0
........................................................................GTCGACAACCGGAGCGGCAACCAT............................. 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0
AGAGCAGTCGCTGCCCGCAGGCACG.................................................................................................... 25 0 15 1.93 29 28 1 0 0 0 0 0 0 0
.......................................................AACCGAGGGTCAAGGAGGTCGACAAC............................................ 26 1 7 1.86 13 10 2 0 0 1 0 0 0 0
........................................................ACCGAGGGTCAAGAAGGTCGACAAC............................................ 25 1 7 1.71 12 11 0 0 1 0 0 0 0 0
.GAGCAGTCGCTGCCCGCAGGCACGA................................................................................................... 25 0 15 1.67 25 25 0 0 0 0 0 0 0 0
...........................................................TAGGGTCAAGGAGGTCGACAAC............................................ 22 1 8 1.63 13 11 0 1 0 1 0 0 0 0
......................................................CTACCGAGGGTCAAGGAGGTCGACAA............................................. 26 0 7 1.57 11 11 0 0 0 0 0 0 0 0
......................................................TTACCGAGGGTCAAGGAGGTCGACAAC............................................ 27 1 7 1.57 11 9 1 0 1 0 0 0 0 0
............................................................AGGGTCAAGAAGGTCGACAAC............................................ 21 1 8 1.50 12 10 1 0 1 0 0 0 0 0
..............................................................TGTCAAGGAGGTCGACAAC............................................ 19 1 8 1.50 12 12 0 0 0 0 0 0 0 0
..........................................................................TGACAACCGGAGCGGCAACCAT............................. 22 1 2 1.50 3 3 0 0 0 0 0 0 0 0
.........................................................CCGAGGGTCAAGAAGGTCGACAAC............................................ 24 1 8 1.50 12 12 0 0 0 0 0 0 0 0
................................ACCACTGCTCCTCCTAACCACGCT..................................................................... 24 1 20 1.40 28 27 0 0 0 1 0 0 0 0
.........................................................TCGAGGGTCAAGGAGGTCGACAAC............................................ 24 1 8 1.38 11 10 0 1 0 0 0 0 0 0
...........................................................AAGGGTCAAGGAGGTCGACAA............................................. 21 1 8 1.38 11 11 0 0 0 0 0 0 0 0
............................................................AGGGTCAAGGAGGTCGACA.............................................. 19 0 8 1.38 11 11 0 0 0 0 0 0 0 0
..........................................................TGAGGGTCAAGGAGGTCGACAA............................................. 22 1 8 1.38 11 11 0 0 0 0 0 0 0 0
....CAGTCGCTGCCCGCAGGCACGAG.................................................................................................. 23 0 15 1.33 20 19 0 1 0 0 0 0 0 0
..................................................CACGCTACCGAGGGTCAAGGAGGT................................................... 24 0 20 1.30 26 19 7 0 0 0 0 0 0 0
........................................................ACCGAGGGTCAAGGAGGTCGACAACC........................................... 26 0 7 1.29 9 9 0 0 0 0 0 0 0 0
..........................................................CGAGGGTCAAGGAGGTCGACAGC............................................ 23 1 8 1.25 10 0 0 9 0 0 0 0 0 1
.........................................................ACGAGGGTCAAGGAGGTCGACAAC............................................ 24 1 8 1.25 10 10 0 0 0 0 0 0 0 0
..........................................................CGAGGGTCAAGGAGGTCGAC............................................... 20 0 14 1.21 17 10 6 0 0 1 0 0 0 0
.....AGTCGCTGCCCGCAGGCACGAG.................................................................................................. 22 0 15 1.20 18 18 0 0 0 0 0 0 0 0
....................................CTGCTCCTCCTAACCACGCT..................................................................... 20 0 20 1.20 24 24 0 0 0 0 0 0 0 0
...........................................................GAGGGTCAAGAAGGTCGACAAC............................................ 22 1 8 1.13 9 8 0 0 0 1 0 0 0 0
...........................................................GAGGGTCAAGGAGGTCGACA.............................................. 20 0 8 1.13 9 9 0 0 0 0 0 0 0 0
.............................................CTAACCACGCTACCGAGGGTCAAG........................................................ 24 0 20 1.10 22 20 0 2 0 0 0 0 0 0
..............................................................AGTCAAGGAGGTCGACAAC............................................ 19 1 10 1.10 11 11 0 0 0 0 0 0 0 0
.......................................................................................GGCAACCATAGCGGCCCATAGGAGC............. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............CCCGCAGGCACGAGAGCGTAC........................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................AGGTCGACAACCGGAGCGGCAACCATA............................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................ACAACCGGAGCGGCAACCA.............................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................ACAACCGGAGCGGCAACCATAGCGGCC...................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................GACAACCGGAGCGGCAACCATAGC.......................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........TGCCCGCAGGCACGAGAGCGTAC........................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................CGGCAACCATAGCGGCCCATAGGAGC............. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................CGTACCGCTGCTCCTCCTAACCACGCT..................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................AAAAGGGTCAAGGAGGTCGACAAC............................................ 24 3 8 1.00 8 8 0 0 0 0 0 0 0 0
..........................................................................CGACAACCGGAGCGGCAACCATAGC.......................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................AGGGTCAAGGAGGTCGACAACCG.......................................... 23 0 8 1.00 8 5 3 0 0 0 0 0 0 0
.........GCTGCCCGCAGGCACGAGAGCGT............................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.........................................................................TCGACAACCGGAGCGGCAACCATAG........................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................AGGTCGACAACCGGAGCGGCAAC................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................CGACAACCGGAGCGGCAACCAT............................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................CGAGGGTCAAGGAGGTCGACAACG........................................... 24 1 8 1.00 8 8 0 0 0 0 0 0 0 0
.............................CGTACCGCTGCTCCTCCT.............................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................GTCGACAACCGGAGCGGCAACCA.............................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................TACCGCTGCTCCTCCTAACCACGCT..................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................CCTCCTAACCACGCTACCGAGGGT............................................................ 24 0 20 1.00 20 19 0 0 0 1 0 0 0 0
.......................................CTCCTCCTAACCACGCTACCGAGGGT............................................................ 26 0 20 1.00 20 18 0 0 0 2 0 0 0 0
.....................................................................................GCGGCAACCATAGCGGCCCATAGGAG.............. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................AAGGTCGACAACCGGAGCGGCAACC............................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................GGTCGACAACCGGAGCGGCAACCATC............................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................GGAGGTTGACAACCGGAGCGGCAACC............................... 26 1 2 1.00 2 2 0 0 0 0 0 0 0 0
......GTCGCTGCCCGCAGGCACGAG.................................................................................................. 21 0 15 0.93 14 14 0 0 0 0 0 0 0 0
...................................................ACGCTACCGAGGGTCAAGGAGGT................................................... 23 0 20 0.90 18 14 4 0 0 0 0 0 0 0
........................................................CCCGAGGGTCAAGGAGGTCGACAAC............................................ 25 1 8 0.88 7 6 1 0 0 0 0 0 0 0
.........................................................CCGAGGGTCAAGGAGGTCGACA.............................................. 22 0 8 0.88 7 6 1 0 0 0 0 0 0 0
.........................................................AAGAGGGTCAAGGAGGTCGACAAC............................................ 24 2 8 0.88 7 7 0 0 0 0 0 0 0 0
...........................................................AAAGGTCAAGGAGGTCGACAAC............................................ 22 2 8 0.88 7 7 0 0 0 0 0 0 0 0
..............................................................GGTCAAGGAGGTCGACAACCGGAG....................................... 24 0 8 0.88 7 7 0 0 0 0 0 0 0 0
...........................................................GAGGGTCAAGGAGGTCGAC............................................... 19 0 14 0.79 11 10 1 0 0 0 0 0 0 0
........................................................ACCGAGGGTCAAGGAGGTCGAC............................................... 22 0 13 0.77 10 10 0 0 0 0 0 0 0 0
...........................................................ATGGGTCAAGGAGGTCGACAAC............................................ 22 2 8 0.75 6 6 0 0 0 0 0 0 0 0
...............................................................GTCAAGGAGGTCGACAACCGGAGC...................................... 24 0 8 0.75 6 6 0 0 0 0 0 0 0 0
............................................................TGGGTCAAGGAGGTCGACAA............................................. 20 1 8 0.75 6 6 0 0 0 0 0 0 0 0
........................................................CACGAGGGTCAAGGAGGTCGACAAC............................................ 25 2 8 0.75 6 3 3 0 0 0 0 0 0 0
............................................................ATGGTCAAGGAGGTCGACAAC............................................ 21 1 8 0.75 6 6 0 0 0 0 0 0 0 0
..........................................................CGAGGGTCAAGGAGGTCGACAACT........................................... 24 1 8 0.75 6 6 0 0 0 0 0 0 0 0
.............................................................AGGTCAAGGAGGTCGACAA............................................. 19 1 8 0.75 6 6 0 0 0 0 0 0 0 0
..............................................................GGTCAAGGAGGTCGACAACCGGA........................................ 23 0 8 0.75 6 6 0 0 0 0 0 0 0 0
..........................................................AGAGGGTCAAGGAGGTCGACAA............................................. 22 1 8 0.75 6 6 0 0 0 0 0 0 0 0
.AAGCAGTCGCTGCCCGCAGGCACGAG.................................................................................................. 26 1 15 0.73 11 11 0 0 0 0 0 0 0 0
.........................................................CCGAGGGTCAAGGAGGTCGAC............................................... 21 0 14 0.71 10 9 1 0 0 0 0 0 0 0
........................................................ACCGAGGGTCAAGGAGGTCGACA.............................................. 23 0 7 0.71 5 5 0 0 0 0 0 0 0 0
.................................CCACTGCTCCTCCTAACCACGCT..................................................................... 23 1 20 0.70 14 13 0 1 0 0 0 0 0 0
...................................ACTGCTCCTCCTAACCACGCT..................................................................... 21 1 20 0.70 14 14 0 0 0 0 0 0 0 0
....................................CTGCTCCTCCTAACCACGCTAC................................................................... 22 0 20 0.70 14 9 0 2 3 0 0 0 0 0
.GAGCAGTCGCTGCCCGCAGGCAC..................................................................................................... 23 0 15 0.67 10 10 0 0 0 0 0 0 0 0
........................................TCCTCCTAACCACGCTACCGAGGGT............................................................ 25 0 20 0.65 13 10 0 2 0 1 0 0 0 0
..................................CACTGCTCCTCCTAACCACGCT..................................................................... 22 1 20 0.65 13 13 0 0 0 0 0 0 0 0
.........GCTGCCCGCAGGCACGAGAGCG.............................................................................................. 22 0 16 0.63 10 10 0 0 0 0 0 0 0 0
........CGCTGCCCGCAGGCACGAG.................................................................................................. 19 0 16 0.63 10 10 0 0 0 0 0 0 0 0
............................................................AGGGTCAAGGAGGTCGACAACT........................................... 22 1 8 0.63 5 5 0 0 0 0 0 0 0 0
...........................................................GAGGGTCAAGGAGGTCGACAACA........................................... 23 1 8 0.63 5 1 4 0 0 0 0 0 0 0
..........................................................CGGGGGTCAAGGAGGTCGACAAC............................................ 23 1 8 0.63 5 4 0 0 0 0 1 0 0 0
..........................................................CGAGGGTCAAGGGGGTCGACAAC............................................ 23 1 8 0.63 5 2 3 0 0 0 0 0 0 0
.........................................................ACCAGGGTCAAGGAGGTCGACAAC............................................ 24 2 8 0.63 5 0 5 0 0 0 0 0 0 0
.............................................................GGGTCAAGGAGGTCGACA.............................................. 18 0 8 0.63 5 5 0 0 0 0 0 0 0 0
........CGCTGCCCGCAGGCACGAGAGCG.............................................................................................. 23 0 16 0.63 10 10 0 0 0 0 0 0 0 0
...........................................................GAGGGTCAAGGAGGTCGACAACG........................................... 23 1 8 0.63 5 5 0 0 0 0 0 0 0 0
.............................................................GGGTCAAGGAGGTCGACAACCG.......................................... 22 0 8 0.63 5 5 0 0 0 0 0 0 0 0
.............................................................GGGTCAAGAAGGTCGACAAC............................................ 20 1 8 0.63 5 5 0 0 0 0 0 0 0 0
..........................................................CGAGGGTCAGGGAGGTCGACAAC............................................ 23 1 10 0.60 6 4 2 0 0 0 0 0 0 0
...........................................TCCTAACCACGCTACCGAGGGTCAAG........................................................ 26 0 20 0.60 12 11 0 1 0 0 0 0 0 0
...GCAGTCGCTGCCCGCAGGCACGA................................................................................................... 23 0 15 0.60 9 9 0 0 0 0 0 0 0 0
........................................................AAAAAGGGTCAAGGAGGTCGACAAC............................................ 25 3 7 0.57 4 4 0 0 0 0 0 0 0 0
......................................................ATACCGAGGGTCAAGGAGGTCGACAAC............................................ 27 1 7 0.57 4 4 0 0 0 0 0 0 0 0
.......................................................TACCGAGGGTCAAGGAGGTCGACAACC........................................... 27 0 7 0.57 4 4 0 0 0 0 0 0 0 0
.GAGCAGTCGCTGCCCGCAGGCACG.................................................................................................... 24 0 15 0.53 8 6 0 2 0 0 0 0 0 0
..AGCAGTCGCTGCCCGCAGGCACGAGAG................................................................................................ 27 0 15 0.53 8 8 0 0 0 0 0 0 0 0
......GTCGCTGCCCGCAGGCACGAGAGCG.............................................................................................. 25 0 15 0.53 8 8 0 0 0 0 0 0 0 0
..............................................................GGTCAAGGAGGTCGACAACCG.......................................... 21 0 8 0.50 4 4 0 0 0 0 0 0 0 0
..........................................................................TGACAACCGGAGCGGCAACCATAG........................... 24 1 2 0.50 1 1 0 0 0 0 0 0 0 0
...........................................................GAGGGTCAAGGAGTTCGACAAC............................................ 22 1 8 0.50 4 4 0 0 0 0 0 0 0 0
.........................................................CCGAGGGTCAAGGAGGTCGACAACCG.......................................... 26 0 8 0.50 4 3 1 0 0 0 0 0 0 0
..........................................................CGAGGGTCAAGGAGGTCG................................................. 18 0 14 0.50 7 6 1 0 0 0 0 0 0 0
.............................................................GGGTCAAGGAGGTCGACAACT........................................... 21 1 8 0.50 4 4 0 0 0 0 0 0 0 0
..................................................................................GGAGCGGCAACCATAGCGG........................ 19 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.......................................................................AGTTGACAACCGGAGCGGCAACCAT............................. 25 2 2 0.50 1 1 0 0 0 0 0 0 0 0
.......................................................................GGTCGACAACCGGAGCGGCAA................................. 21 0 8 0.50 4 4 0 0 0 0 0 0 0 0
...........................................................GAGGGTCAAGGAGGTCGACAACT........................................... 23 1 8 0.50 4 4 0 0 0 0 0 0 0 0
..............................................................GGTCAAGGAGGTCGACAACCGGAGT...................................... 25 1 8 0.50 4 0 4 0 0 0 0 0 0 0
...........................................................GAGGGTCAAGGAGGTCGACAGC............................................ 22 1 8 0.50 4 3 0 1 0 0 0 0 0 0
..........................................................CGAGGGTCAAGGAGGTCGACAACA........................................... 24 1 8 0.50 4 3 1 0 0 0 0 0 0 0
..................................................................AAGGAGGTTGACAACCGGAGCGGCAAC................................ 27 1 2 0.50 1 1 0 0 0 0 0 0 0 0
............................................................AGGGTCAAGGAGGTCGAC............................................... 18 0 14 0.50 7 6 0 0 0 1 0 0 0 0
........................................................................GTTGACAACCGGAGCGGCAACCA.............................. 23 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.....................................................................AAGGTTGACAACCGGAGCGGCAACC............................... 25 2 2 0.50 1 1 0 0 0 0 0 0 0 0
........................................................................GTTGACAACCGGAGCGGCAACCATAG........................... 26 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.........................................................................TTGACAACCGGAGCGGCAACCA.............................. 22 1 2 0.50 1 1 0 0 0 0 0 0 0 0
..........................................................AAAGGGTCAAGGAGGTCGACAA............................................. 22 2 8 0.50 4 4 0 0 0 0 0 0 0 0
....................................................................GGAGGTTGACAACCGGAGCGGCAACCAT............................. 28 1 2 0.50 1 0 0 1 0 0 0 0 0 0
....................................................................GGAGGTCGACAACCGGAGCGGCAA................................. 24 0 8 0.50 4 4 0 0 0 0 0 0 0 0
..................................................................................GGAGCGGCAACCATAGCGGC....................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.................................................................................CGGAGCGGCAACCATAGCGGCC...................... 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.....................................................................GAGGTCGACAACCGGAGCGGCAA................................. 23 0 8 0.50 4 4 0 0 0 0 0 0 0 0
.........................................................................TTGACAACCGGAGCGGCAACCATAG........................... 25 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.......................................................TTCCGAGGGTCAAGGAGGTCGACAAC............................................ 26 1 8 0.50 4 4 0 0 0 0 0 0 0 0
..TGCAGTCGCTGCCCGCAGGCACGAG.................................................................................................. 25 1 15 0.47 7 7 0 0 0 0 0 0 0 0
...ACAGTCGCTGCCCGCAGGCACGAG.................................................................................................. 24 1 15 0.47 7 7 0 0 0 0 0 0 0 0
..AGCAGTCGCTGCCCGCAGGCACGAGA................................................................................................. 26 0 15 0.47 7 7 0 0 0 0 0 0 0 0
.......................................................TACCGAGGGTCAAGGAGGTCGAC............................................... 23 0 13 0.46 6 6 0 0 0 0 0 0 0 0
....................................................CGCTACCGAGGGTCAAGGAGGTCGAC............................................... 26 0 13 0.46 6 6 0 0 0 0 0 0 0 0
..................................................CACGCTACCGAGGGTCAAGGAGGTCGAC............................................... 28 0 13 0.46 6 6 0 0 0 0 0 0 0 0
.....................................................GCTACCGAGGGTCAAGGAGGTC.................................................. 22 0 13 0.46 6 3 3 0 0 0 0 0 0 0
............................................................AAAGTCAAGGAGGTCGACAAC............................................ 21 2 11 0.45 5 5 0 0 0 0 0 0 0 0
..................................CGCTGCTCCTCCTAACCACGCTAC................................................................... 24 0 20 0.45 9 9 0 0 0 0 0 0 0 0
.............................................................ATGTCAAGGAGGTCGACAAC............................................ 20 2 9 0.44 4 4 0 0 0 0 0 0 0 0
........................................................ATCGAGGGTCAAGGAGGTCGACAAC............................................ 25 1 7 0.43 3 2 0 0 0 1 0 0 0 0
......................................................CTACCGAGGGTCAAGGAGGTCGACA.............................................. 25 0 7 0.43 3 3 0 0 0 0 0 0 0 0
...GCAGTCGCTGCCCGCAGGCACGAGAG................................................................................................ 26 0 15 0.40 6 6 0 0 0 0 0 0 0 0
..............................................TAACCACGCTACCGAGGGTCAAG........................................................ 23 0 20 0.40 8 7 0 1 0 0 0 0 0 0
.GAGCAGTCGCTGCCCGCAGGCACGAGA................................................................................................. 27 0 15 0.40 6 6 0 0 0 0 0 0 0 0
.......................................................................................................CATAGGAGCCTGCTCCCCCGG. 21 0 5 0.40 2 2 0 0 0 0 0 0 0 0
.....................................TGCTCCTCCTAACCACGCTACCGAGGGT............................................................ 28 0 20 0.40 8 8 0 0 0 0 0 0 0 0
..............................................................GGTCAAGGAGGTCGACAACT........................................... 20 1 8 0.38 3 3 0 0 0 0 0 0 0 0
..........................................................CGAGGGTCAAGAAGGTCGACAA............................................. 22 1 8 0.38 3 3 0 0 0 0 0 0 0 0
............................................................AGGGTCAAGGAGGTCGACAGC............................................ 21 1 8 0.38 3 3 0 0 0 0 0 0 0 0
.......TCGCTGCCCGCAGGCACGAGAGCG.............................................................................................. 24 0 16 0.38 6 6 0 0 0 0 0 0 0 0
..............................................................GGTCAAGAAGGTCGACAAC............................................ 19 1 8 0.38 3 3 0 0 0 0 0 0 0 0
...........................................................GAGGGTCAAGGAGGTCGACAACCG.......................................... 24 0 8 0.38 3 3 0 0 0 0 0 0 0 0
................................................................TCAAGGAGGTCGACAACCG.......................................... 19 0 8 0.38 3 3 0 0 0 0 0 0 0 0
..........................................................CGAGGGTCAAGGAGGTCGGCAAC............................................ 23 1 8 0.38 3 3 0 0 0 0 0 0 0 0
...................................................AAGCTCTCGAGGGTCAAGGAGGTCGACAAC............................................ 30 3 8 0.38 3 0 3 0 0 0 0 0 0 0
..........................................................CAAGGGTCAAGGAGGTCGACAAC............................................ 23 1 8 0.38 3 1 1 1 0 0 0 0 0 0
....................................................................GGAGGTCGACAACCGGAGCGGCA.................................. 23 0 8 0.38 3 3 0 0 0 0 0 0 0 0
..........................................................CGAGGGTCAAGGAGGTCGACAACCG.......................................... 25 0 8 0.38 3 1 1 0 1 0 0 0 0 0
...............................................................GTCAAGGAGGTCGACAACCGGA........................................ 22 0 8 0.38 3 2 0 0 0 1 0 0 0 0
..........................................................CGAGGGTCAAGGAGGTCTACAAC............................................ 23 1 8 0.38 3 2 0 1 0 0 0 0 0 0
..........................................................CGAGGGTCGAGGAGGTCGACAAC............................................ 23 1 8 0.38 3 3 0 0 0 0 0 0 0 0
.........GCTGCCCGCAGGCACGAG.................................................................................................. 18 0 16 0.38 6 6 0 0 0 0 0 0 0 0
........................................................TTTGAGGGTCAAGGAGGTCGACAAC............................................ 25 3 8 0.38 3 3 0 0 0 0 0 0 0 0
.........................................................ACGAGGGTCAAGAAGGTCGACAAC............................................ 24 2 8 0.38 3 0 3 0 0 0 0 0 0 0
..........................................................CGAGGTTCAAGGAGGTCGACAAC............................................ 23 1 8 0.38 3 2 0 1 0 0 0 0 0 0
..........................................................CTAGGGTCAAGGAGGTCGACAAC............................................ 23 1 8 0.38 3 2 0 0 0 1 0 0 0 0
...........................................................GAGGGTCAAGGGGGTCGACAAC............................................ 22 1 8 0.38 3 3 0 0 0 0 0 0 0 0
...............................................................GTCAAGGAGGTCGACAACCGGAG....................................... 23 0 8 0.38 3 2 0 0 0 1 0 0 0 0
..........................................................CGAGGGTCAAGGCGGTCGACAAC............................................ 23 1 8 0.38 3 0 1 2 0 0 0 0 0 0
.............................................................GGGTCAAGGAGGCCGACAAC............................................ 20 1 8 0.38 3 2 0 0 0 1 0 0 0 0
TGAGCAGTCGCTGCCCGCAGGCACGAG.................................................................................................. 27 1 16 0.38 6 6 0 0 0 0 0 0 0 0
..........................................................CGAGGGCCAAGGAGGTCGACAAC............................................ 23 1 8 0.38 3 3 0 0 0 0 0 0 0 0
........................................................TTCGAGGGTCAAGGAGGTCGACAAC............................................ 25 2 8 0.38 3 2 0 1 0 0 0 0 0 0
..........................................................CGAGGGTCAAGGAGGTCGATAAC............................................ 23 1 8 0.38 3 1 0 2 0 0 0 0 0 0
...........................................................GAGGGTCAATGAGGTCGACAAC............................................ 22 1 8 0.38 3 3 0 0 0 0 0 0 0 0
.........................................................CCGAGGGTCGAGGAGGTCGACAAC............................................ 24 1 8 0.38 3 3 0 0 0 0 0 0 0 0
..........................................................CGAGGGTCAAGGAGGTCGA................................................ 19 0 14 0.36 5 5 0 0 0 0 0 0 0 0
....................................CTGCTCCTCCTAACCACGCTACCGA................................................................ 25 0 20 0.35 7 7 0 0 0 0 0 0 0 0
......................................GCTCCTGCTAACCACGCTACCGAGGGT............................................................ 27 1 20 0.35 7 7 0 0 0 0 0 0 0 0
............................................CCTAACCACGCTACCGAGGGTCAAGG....................................................... 26 0 20 0.35 7 7 0 0 0 0 0 0 0 0
.CAGCAGTCGCTGCCCGCAGGCACGAG.................................................................................................. 26 1 15 0.33 5 2 0 3 0 0 0 0 0 0
..AGCAGTCGCTGCCCGCAGGCACG.................................................................................................... 23 0 15 0.33 5 5 0 0 0 0 0 0 0 0
...........AGCCCGCAGGCACGAGAGCTT............................................................................................. 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0
........CGCTGCCCGCAGGCACGAGAG................................................................................................ 21 0 16 0.31 5 5 0 0 0 0 0 0 0 0
............................................................AAAATCAAGGAGGTCGACAAC............................................ 21 3 20 0.30 6 6 0 0 0 0 0 0 0 0
................................ACCGCTGCTCCTCCTAACCACGCTAC................................................................... 26 0 20 0.30 6 6 0 0 0 0 0 0 0 0
................................ACCGCTGCTCCTCCTAACCACGC...................................................................... 23 0 20 0.30 6 6 0 0 0 0 0 0 0 0
...................................GCTGCTCCTCCTAACCACGCTAC................................................................... 23 0 20 0.30 6 4 0 2 0 0 0 0 0 0
.........................................CCTCCTAACCACGCTACCGAGGGTCAAG........................................................ 28 0 20 0.30 6 5 0 1 0 0 0 0 0 0
................................ACCGCTGCTCCTCCTAACCACGCTA.................................................................... 25 0 20 0.30 6 3 3 0 0 0 0 0 0 0
...................................GCTGCTCCTCCTAACCACGC...................................................................... 20 0 20 0.30 6 6 0 0 0 0 0 0 0 0
..........................................................CGAGGGTCAAGGATGTCGACAAC............................................ 23 1 10 0.30 3 3 0 0 0 0 0 0 0 0
.................................CCGCTGCTCCTCCTAACCACGC...................................................................... 22 0 20 0.30 6 6 0 0 0 0 0 0 0 0
......................................................AAACCGAGGGTCAAGGAGGTCGACAAC............................................ 27 2 7 0.29 2 2 0 0 0 0 0 0 0 0
........................................................ACCGAGGGTCAAGGCGGTCGACAAC............................................ 25 1 7 0.29 2 0 0 0 1 0 0 0 1 0
........................................................ACCGAGGGTCAAGGAGCTCGACAAC............................................ 25 1 7 0.29 2 2 0 0 0 0 0 0 0 0
........................................................ACCGAGGGTCAAGAAGGTCGACAA............................................. 24 1 7 0.29 2 2 0 0 0 0 0 0 0 0
.....................................................GCTACCGAGGGTCAAGGAGGTCGACAA............................................. 27 0 7 0.29 2 2 0 0 0 0 0 0 0 0
........................................................AACGAGGGTCAAGGAGGTCGACAAC............................................ 25 1 7 0.29 2 2 0 0 0 0 0 0 0 0
........................................................ACCGAGGGTCGAGGAGGTCGACAAC............................................ 25 1 7 0.29 2 2 0 0 0 0 0 0 0 0
AGAGCAGTCGCTGCCCGCAAGCACGAG.................................................................................................. 27 1 15 0.27 4 4 0 0 0 0 0 0 0 0
AGAGCAGTCGCTGCCCGCAGGCA...................................................................................................... 23 0 15 0.27 4 4 0 0 0 0 0 0 0 0
..AGCAGTCGCTGCCCGCAGGCAC..................................................................................................... 22 0 15 0.27 4 4 0 0 0 0 0 0 0 0
.....AGTCGCTGCCCGCAGGCACGAGAGCG.............................................................................................. 26 0 15 0.27 4 4 0 0 0 0 0 0 0 0
.........................................................TTGAGGGTCAAGGAGGTCGACAAC............................................ 24 2 8 0.25 2 1 0 0 0 1 0 0 0 0
........................................................................ATCGACAACCGGAGCGGCAA................................. 20 1 8 0.25 2 2 0 0 0 0 0 0 0 0
............................................................GGGGTCAAGGAGGTCGACAAC............................................ 21 1 8 0.25 2 2 0 0 0 0 0 0 0 0
............................................................AGGGTCAAGGAGGTCGACAACCGG......................................... 24 0 8 0.25 2 2 0 0 0 0 0 0 0 0
..........................................................CGAAGGTCAAGGAGGTCGACAAC............................................ 23 1 8 0.25 2 1 1 0 0 0 0 0 0 0
.......................................CTCCTGCTAACCACGCTACCGAGGGT............................................................ 26 1 20 0.25 5 5 0 0 0 0 0 0 0 0
............................................................AGGGCCAAGGAGGTCGACAAC............................................ 21 1 8 0.25 2 2 0 0 0 0 0 0 0 0
.........................................................CCGAGGGTCAAGGAGGTCGACAACT........................................... 25 1 8 0.25 2 2 0 0 0 0 0 0 0 0
..........................................................CGAGGGTCAAGGAGGCCGACAAC............................................ 23 1 8 0.25 2 1 1 0 0 0 0 0 0 0
..........................................................CGAGGGTCAAGGTGGTCGACAAC............................................ 23 1 8 0.25 2 1 0 0 0 1 0 0 0 0
...........................................................GAGGGTCAAGAAGGTCGACAA............................................. 21 1 8 0.25 2 2 0 0 0 0 0 0 0 0
............................................................AGGGTCAAGGAGGTCGACAACCGGAG....................................... 26 0 8 0.25 2 2 0 0 0 0 0 0 0 0
.................................................................CAAGGAGGTCGACAACCGGAGC...................................... 22 0 8 0.25 2 2 0 0 0 0 0 0 0 0
............................................................AGGGTCAAGGAGGTCGACAACG........................................... 22 1 8 0.25 2 2 0 0 0 0 0 0 0 0
.........................................................TAGAGGGTCAAGGAGGTCGACAAC............................................ 24 2 8 0.25 2 2 0 0 0 0 0 0 0 0
............................................................TTGGTCAAGGAGGTCGACAAC............................................ 21 2 8 0.25 2 2 0 0 0 0 0 0 0 0
.............................................................GGGTCAAGGAGGTCTACAAC............................................ 20 1 8 0.25 2 1 0 1 0 0 0 0 0 0
...............................................................GTCAAGGAGGTCGACAACCG.......................................... 20 0 8 0.25 2 2 0 0 0 0 0 0 0 0
..........................................................GGAGGGTCAAGGAGGTCGACAAC............................................ 23 1 8 0.25 2 2 0 0 0 0 0 0 0 0
.........................................................TATAGGGTCAAGGAGGTCGACAAC............................................ 24 3 8 0.25 2 2 0 0 0 0 0 0 0 0
.......TCGCTGCCCGCAGGCACGAG.................................................................................................. 20 0 16 0.25 4 4 0 0 0 0 0 0 0 0
.....................................................................GAGGTCGACAACCGGAGCGGC................................... 21 0 8 0.25 2 2 0 0 0 0 0 0 0 0
.................................................................CAAGGAGGTCGACAACCGGAGCGGCAA................................. 27 0 8 0.25 2 2 0 0 0 0 0 0 0 0
..................................................................AAGGAGGTCGACAACCGGAGCGGCAA................................. 26 0 8 0.25 2 2 0 0 0 0 0 0 0 0
..........................................................TCAGGGTCAAGGAGGTCGACAAC............................................ 23 2 8 0.25 2 0 2 0 0 0 0 0 0 0
.................................................................CAAGGAGGTCGACAACCGGAGCGGCA.................................. 26 0 8 0.25 2 2 0 0 0 0 0 0 0 0
.........................................................CCGAGTGTCAAGGAGGTCGACAAC............................................ 24 1 8 0.25 2 2 0 0 0 0 0 0 0 0
...............................................................GTCAAGGAGGTCGACAACCGGAGCG..................................... 25 0 8 0.25 2 2 0 0 0 0 0 0 0 0
...........................................................GAGGGTCAAGGAGGTCGGCAAC............................................ 22 1 8 0.25 2 2 0 0 0 0 0 0 0 0
............................................................AGGGTCAAGGCGGTCGACAAC............................................ 21 1 8 0.25 2 1 0 0 0 1 0 0 0 0
...............................................................GTCAAGGAGGTCGACAACCGGAGT...................................... 24 1 8 0.25 2 2 0 0 0 0 0 0 0 0
.............................................................GGGTCAAGGAGGTCGACAACG........................................... 21 1 8 0.25 2 2 0 0 0 0 0 0 0 0
........................................................................GTCGACAACCGGAGCGGCAA................................. 20 0 8 0.25 2 2 0 0 0 0 0 0 0 0
.........................................................CCGAGGGTCAAGGAGGTCGACAGC............................................ 24 1 8 0.25 2 2 0 0 0 0 0 0 0 0
.............................................................GGGTCAAGGAGGTCGACAACA........................................... 21 1 8 0.25 2 2 0 0 0 0 0 0 0 0
...........................................................GAGGGTCATGGAGGTCGACAAC............................................ 22 1 8 0.25 2 1 0 0 0 1 0 0 0 0
.............................................................CGGTCAAGGAGGTCGACAAC............................................ 20 1 8 0.25 2 0 0 2 0 0 0 0 0 0
................................................ACCACGCTACCGAGGGTCAAGGAGGT................................................... 26 0 20 0.25 5 2 3 0 0 0 0 0 0 0
..............................................................TGTCAAGGAGGTCGACAA............................................. 18 1 8 0.25 2 2 0 0 0 0 0 0 0 0
...........................................................GGGGGTCAAGGAGGTCGACAAC............................................ 22 1 8 0.25 2 2 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:30745608-30745732 + dps_892 TCTCGTCAGCGACGGGCGTCCGTGCTCTCGCATG-----GCGACGAGGAGGATTGGTGCGATGGCTCCCAG---------------TTCCTCCAGCTGTTGGCCTCGCCGTTGGTATCGC-------------CG--------------------------------GGTATCCTCGGACGAGGGGGCC---G
droPer2 scaffold_659:4219-4375 + TCTCGTCAGCGACGGGCGTCCGTGCTCTCGCGTG-----GCGACGAGGAGGATTGGTGCGATGGCTCCCAG---------------TTCCTCCAGCTGTTGGCCTCGCCGTTAGTATCGC-------------CGGCGCCGTCGGGCCACGACTCCGTGTCACCGACGGTATCCTCGGACGAGGGGGCC---G
droWil2 scf2_1100000004961:4901542-4901585 + GTCG----------------GTAGTATCGGACCG-----TGAGGTGGAT-----------------------------------------------------------------------------------------------------------------------------ACGGACGAGGAGTCG---A
droVir3 scaffold_12726:73257-73270 - GG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGAGGGTGCC---G
droMoj3 scaffold_6540:9116549-9116596 - TGTG--------------------------------------------------------AAGGTGCCCAG---------------TTCTCATTGCTGTTGTCGTTGTTGTTGGTGTC--------------------------------------------------------------------------G
droGri2 scaffold_14830:5092859-5092904 + CT-----------------------------------------------------------------------------------------GTAGCTGTTGCCGTTGCCGTTGCCATTGC-------------TG--------------------------------CGCATCTGCCGAC-------------
droAna3 scaffold_13335:771396-771480 + TCTC----------------CTCGCTCTCGGACG-----ACAGCGGGAAGCCGTTGAGCGTCTGCTCCATA---------------TTCGCCAAGTCGCGATCCTGGCTACTGGAACCGC-------------C-----------------------------------------------------------
droBip1 scf7180000396006:21225-21309 + TCTC----------------CTCGCTCTCGGACG-----ACAGCGGGAAGCCGTTGAGCGTCTGCTCCATA---------------TTCGCCAAGTCGCGATCCTGGCTACTGGAACCGC-------------C-----------------------------------------------------------
droKik1 scf7180000302682:1791303-1791318 + TC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGGAGGAGGCC---G
droFic1 scf7180000453918:8952-9039 - GGC--------------------------------------GAAGTGGAGGCGTCG-GCGCTCG-TCGTCG---------------GCCCTCCAGCTGCTGGCGTCCCCGCTGGTATCGCGGTCCCCGTCGCC--------------------------------------------GGCG---AGGAG---G
droEle1 scf7180000489031:143-217 + TTCT---------------------------------------------------------------------------------------TCAGCTTCTGGCGTCCCCCCTGGTGTCGCGATCCCCGTCACC-G-----------------------GTCAGCGAG-------GCGGACGAGGAGTCCACCG
droBia1 scf7180000301760:3224583-3224674 - TCTTGCTC---------------AGGCTCAGGCTCAGGTGCGACGAGGAGTCGCC---------------GTTCGCCGAGCCGCCGTTCTTCAGGCTGTCGTCGCCGTCGTCGTCCTTGC-------------C----------------------------------------------------------G
droEug1 scf7180000409672:517534-517552 + TCCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGAGGAGGAGGCC---G
droSim2 x:15426952-15426984 + TC------------------------------------------------------------------------------------------CGGCTGTTGCCATCGCCATTGCTGTCGT-------------CG---------------------------------------------------------G
droSec2 scaffold_17:137539-137571 + TC------------------------------------------------------------------------------------------CGGCTGTTGCCATCGCCATTGCTGTCGT-------------CG---------------------------------------------------------G

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TCTCGTCAGCGACGGGCGTCCGTGCTCTCGCATG-----GCGACGAGGAGGATTGGTGCGATGGCTCCCAG---------------TTCCTCCAGCTGTTGGCCTCGCCGTTGGTATCGC-------------CG--------------------------------GGTATCCTCGGACGAGGGGGCC---GSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................CCAGCTGTTGGCCTCGCCGTTGG...............................................................................231125.00125012410000000
...........................................................................................CCAGCTGTTGGCCTCGCCGTTG................................................................................22191.009109100000000
............................................................................................CAGCTGTTGGCCTCGCCGTTGG...............................................................................22113.001301300000000
...........................................................................................CCAGCTGTTGGCCTCGCCGTTGGT..............................................................................24113.001301300000000
............................................................................................CAGCTGTTGGCCTCGCCGTTG................................................................................21112.001201200000000
...........................................................................................CCAGCTGTTGGCCTCGCCGTT.................................................................................2188.386706310100200
...........................................................................................CCAGCTGTTGGCCTCGCCGTTGGTA.............................................................................2517.0070700000000
...........................................................................................CCAGCTGTTGGCCTCGCCGT..................................................................................2085.004003610100200
...........................................................................................CCAGCTGTTGGCCTCGCCG...................................................................................1983.252602600000000
...........................................................................................CCAGCTGTTGGCCTCGCCGTTGA...............................................................................2313.0030300000000
............................................................................................CAGCTGTTGGCCTCGCCGTTGGT..............................................................................2313.0030300000000
...........................................................................................CCAGCTGTTGGCCTCGCCGTTGT...............................................................................2312.0020200000000
..........................................................................................TCCAGCTGTTGGCCTCGCCGTTG................................................................................2312.0020200000000
...........................................................................................CCAGCTGTTGGCCTCGCC....................................................................................1881.381101100000000
...............................................................................................CTGTTGGCCTCGCCGTTGGTA.............................................................................2111.0010100000000
...........................................................................................CCAGCTGTTGGCCTCGCCGTTGGTAT............................................................................2611.0010100000000
..........................................................................................TCCAGCTGTTGGCCTCGCCGTTGGTA.............................................................................2611.0010100000000
...........................................................................................CCAGCTGTTGGCCTCGCCGTTGC...............................................................................2311.0010100000000
.............................................................................................AGCTGTTGGCCTCGCCGTTG................................................................................2011.0010100000000
...........................................................................................CCAGCTGTTGGCCTCGCCGTTGGC..............................................................................2411.0010100000000
................................................................................................TGTTGGCCTCGCCGTTGGTAT............................................................................2111.0010100000000
.............................................................................................AGCTGTTGGCCTCGCCGTTGGTA.............................................................................2311.0010100000000
...........................................................................................CCAGCTGTTGGCCTCGCCGTTGGTATCG..........................................................................2811.0010100000000
............................................................................................CAGCTGTTGGCCTCGCCGT..................................................................................1980.6350500000000
............................................................................................CAGCTGTTGGCCTCGCCGTT.................................................................................2080.5040400000000
...................................................................................................TGGCCTCGCCGTTGGTATC...........................................................................1920.5010010000000
.............................................AGGAGGATTGGTGCGATGGC................................................................................................................................20200.3060000000600
..........................................ACGAGGAGGATTGGTGCGATGGC................................................................................................................................23200.3060300000300
............................................................................................CAGCTGTTGGCCTCGCCG...................................................................................1880.2520200000000
..........................................ACGAGGAGGATTGGTGCG.....................................................................................................................................18200.2550500000000
........................................................................................CCTCCAGCTGTTGGCCTCGCCG...................................................................................2280.2520200000000
................................................................CTCCCAG---------------TTCCTCCAGCTGTTGG...........................................................................................2380.2520200000000
.............................................AGGAGGATTGGTGCGATGGCTCC.............................................................................................................................23200.2550400001000
...........................................................................................CCAGCTGTTGGCCTCGCCGTTT................................................................................2280.2520200000000
........................................CGACGAGGAGGATTGGTGCG.....................................................................................................................................20200.2550200000300
.....................................................TGGTGCGATGGCTCCCAG---------------TTCC.......................................................................................................22200.2040400000000
..........................................ACGAGGAGGATTGGTGCGATGGCTC..............................................................................................................................25200.2040100000030
.......................................................................................................................................................................GGTATCCTCGGACGAGGGGGC.....2150.2010100000000
........................................................TGCGATGGCTCCCAG---------------TTCCTCCAG..................................................................................................24130.1520200000000
........................................................TGCGATGGCTCCCAG---------------TTCCTCCAGC.................................................................................................25130.1520200000000
................................TG-----GCGACGAGGAGGATTGGT........................................................................................................................................20200.1530100101000
...................................................ATTGGTGCGATGGCTCCCAG---------------...........................................................................................................20200.1530300000000
..........................................ACGAGGAGGATTGGTGCGATGG.................................................................................................................................22200.1530300000000
..............................................GGAGGATTGGTGCGATGGC................................................................................................................................19200.1530200000100
............................................GAGGAGGATTGGTGCGATGGC................................................................................................................................21200.1530000000120
...............................................GAGGATTGGTGCGATGGCTCC.............................................................................................................................21200.1530300000000
.....................................................TGGTGCGATGGCTCCCAG---------------TTCCT......................................................................................................23200.1530300000000
................................TG-----GCGACGAGGAGGATTGGTGT......................................................................................................................................22200.1530000012000
..............................................GGAGGATTGGTGCGATGGCT...............................................................................................................................20200.1530100000200
TCTCGTCAGCGACGGGCGTCCGTGC........................................................................................................................................................................25150.1320200000000
.....TCAGCGACGGGCGTCCGTGCTCTCG...................................................................................................................................................................25150.1320100001000
..TCGTCAGCGACGGGCGTCCGTGCTC......................................................................................................................................................................25150.1320200000000
.....TCAGCGACGGGCGTCCGTGCTA......................................................................................................................................................................22150.1320200000000
....................................................................CAG---------------TTCCTCCAGCTGTTGGCCTCA......................................................................................2480.1310100000000
.......................................................................................TCCTCCAGCTGTTGGCCTCG......................................................................................2080.1310100000000
......................................................................................TTCCTCCAGCTGTTGGCCT........................................................................................1980.1310100000000
.................................................................TCCCAG---------------TTCCTCCAGCTGTTGG...........................................................................................2280.1310100000000
..........................................................................................TCCAGCTGTTGGCCTCGC.....................................................................................1880.1310100000000
................................................................CTCCCAG---------------TTCCTCCAGCTGTTGGC..........................................................................................2480.1310100000000
.................................................................TCCCAG---------------TTCCTCCAGCTGTTGGT..........................................................................................2380.1310100000000
.......................................................................................TCCTCCAGCTGTTGGCCTCGCCGT..................................................................................2480.1310100000000
......................................................................................TTCCTCCAGCTGTTGGCCTC.......................................................................................2080.1310100000000
........................................................................................CCTCCAGCTGTTGGCCTC.......................................................................................1880.1310100000000
......................................................................................TTCCTCCAGCTGTTGGCCTCG......................................................................................2180.1310100000000
...........................................................................................CCAGCTGTTGGCCTCGCCT...................................................................................1980.1310100000000
................................................................CTCCCAG---------------TTCCTCCAGCTGTTG............................................................................................2280.1310100000000
....................................................................CAG---------------TTCCTCCAGCTGTTGGC..........................................................................................2080.1310100000000
................................................................CTCCCAG---------------TTCCTCCAGCTGTTGGCCTC.......................................................................................2780.1310100000000
.......................................................................................TCCTCCAGCTGTTGGCCTCGC.....................................................................................2180.1310100000000
.....................................................TGGTGCGATGGCTCCCAG---------------T..........................................................................................................19200.1020200000000
........................................................TGCGATGGCTCCCAG---------------TTCCT......................................................................................................20200.1020200000000
.....................................................TGGTGCGATGGCTCCCAG---------------TTCCTC.....................................................................................................24200.1020200000000
................................................AGGATTGGTGCGATGGCTC..............................................................................................................................19200.1020000000200
................................TG-----GCGACGAGGAGGATTG..........................................................................................................................................18200.1020000011000
.....................................................TGGTGCGATGGCTCCCAG---------------TTCAA......................................................................................................23200.1020200000000
.................................................GGATTGGTGCGATGGCTCC.............................................................................................................................19200.1020200000000
................................TG-----GCGACGAGGAGGATTGGTG.......................................................................................................................................21200.1020100010000
.....................................................TGGTGCGATGGCTCCCAG---------------TTCCTCCA...................................................................................................26200.1020200000000
...............................................GAGGATTGGTGCGATGGCT...............................................................................................................................19200.1020000000200
.....................................................TGGTGCGATGGCTCCCAG---------------...........................................................................................................18200.1020200000000
...................................................ATTGGTGCGATGGCTCCCAG---------------TTC........................................................................................................23200.1020200000000
................................TG-----GCGACGAGGAGGATTGGTGCGA....................................................................................................................................24200.1020200000000
........................................CGACGAGGAGGATTGGTGCGATGGC................................................................................................................................25200.1020000001100
........................................CGACGAGGAGGATTGGTGCGATGG.................................................................................................................................24200.1020200000000
...............................................GAGGATTGGTGCGATGGC................................................................................................................................18200.1020000000200
................................................AGGATTGGTGCGATGGCT...............................................................................................................................18200.1020000000200
................................TG-----GCGACGAGGAGGATTGG.........................................................................................................................................19200.1020100010000
...CGTCAGCGACGGGCGTCCGTT.........................................................................................................................................................................21150.0710100000000
.CTCGTCAGCGACGGGCGTCCGTGCTC......................................................................................................................................................................26150.0710100000000
TCTCGTCAGCGACGGGCGTCCGTG.........................................................................................................................................................................24150.0710000100000
.....TCAGCGACGGGCGTCCGTGCT.......................................................................................................................................................................21150.0710100000000
..TCGTCAGCGACGGGCGTCCGTGCTCT.....................................................................................................................................................................26150.0710100000000
.....TCAGCGACGGGCGTCCGTGCTCTC....................................................................................................................................................................24150.0710100000000
.......AGCGACGGGCGTCCGTGCTCTCGC..................................................................................................................................................................24160.0610100000000
.........CGACGGGCGTCCGTGCTCTC....................................................................................................................................................................20160.0610100000000
............................................................................................CAGCTGTTGGCCTCGCCA...................................................................................18180.0610100000000
................................TG-----GCGACGAGGAGGATTGGTGCG.....................................................................................................................................23200.0510100000000
..........................................................CGATGGCTCCCAG---------------TTCCTCC....................................................................................................20200.0510100000000
....................................................TTGGTGCGATGGCTCCCAG---------------TTCCTC.....................................................................................................25200.0510100000000
.......................................................GTGCGATGGCTCCCAG---------------TT.........................................................................................................18200.0510100000000
........................................................TGCGATGGCTCCCAG---------------TTCCTC.....................................................................................................21200.0510100000000
.................................G-----GCGACGAGGAGGATTGGTG.......................................................................................................................................20200.0510100000000
................................TG-----GCGACGAGGAGGATTGGTGCGAT...................................................................................................................................25200.0510100000000
............................................GAGGAGGATTGGTGCGATGGCT...............................................................................................................................22200.0510100000000
............................................GAGGAGGATTGGTGCGATGGCTCCCA...........................................................................................................................26200.0510100000000
..............................................GGAGGATTGGTGCGATGG.................................................................................................................................18200.0510100000000
...........................................CGAGGAGGATTGGTGCGATGGCTC..............................................................................................................................24200.0510100000000
......................................................GGTGCGATGGCTCCCAG---------------TTCCTCC....................................................................................................24200.0510100000000
...............................................GAGGATTGGTGCGATGGCTCCCAG---------------T..........................................................................................................25200.0510100000000
...........................................CGAGGAGGATTGGTGCG.....................................................................................................................................17200.0510000000100
.....................................................TGGTGCGATGGCTCCCAG---------------TG.........................................................................................................20200.0510100000000
..................................................GATTGGTGCGATGGCTCCCAG---------------...........................................................................................................21200.0510100000000
....................................................TTGGTGCGATGGCTCCCA...........................................................................................................................18200.0510100000000
...................................................ATTGGTGCGATGGCTCCCAG---------------TTCC.......................................................................................................24200.0510100000000
..............................................GGAGGATTGGTGCGATGGCTCCCAG---------------TTC........................................................................................................28200.0510100000000
.................................G-----GCGACGAGGAGGATTGG.........................................................................................................................................18200.0510100000000
..............................................GGAGGATTGGTGCGATGGCTCCCA...........................................................................................................................24200.0510100000000
.............................................AGGAGGATTGGTGCGATGGCTC..............................................................................................................................22200.0510100000000
TCTCGTCAGCGACGGGCGTCC............................................................................................................................................................................21200.0510100000000
...........................................CGAGGAGGATTGGTGCGATGG.................................................................................................................................21200.0510100000000
.........................................GACGAGGAGGATTGGTGCGATGG.................................................................................................................................23200.0510100000000
............................................GAGGAGGATTGGTGCGATGGCTCC.............................................................................................................................24200.0510001000000
...................................................ATTGGTGCGATGGCTCCCAG---------------T..........................................................................................................21200.0510100000000
................................TG-----GCGACGAGGAGGATTGGG........................................................................................................................................20200.0510000000100
...........................................CGAGGAGGATTGGTGCGATGGCT...............................................................................................................................23200.0510000000100
...............................................GAGGATTGGTGCGATGGCTC..............................................................................................................................20200.0510100000000
TCTCGTCAGCGACGGGCGTC.............................................................................................................................................................................20200.0510100000000
..........................................ACGAGGAGGATTGGTGAA.....................................................................................................................................18200.0510000000100
.............................................AGGAGGATTGGTGCGATGGCTCCC............................................................................................................................24200.0510100000000
...................................................ATTGGTGCGATGGCTCCCAG---------------TTCCT......................................................................................................25200.0510100000000
droPer2
TCTCGTCAGCGACGGGCGTCCGTGCTCTCGCGTG-----GCGACGAGGAGGATTGGTGCGATGGCTCCCAG---------------TTCCTCCAGCTGTTGGCCTCGCCGTTAGTATCGC-------------CGGCGCCGTCGGGCCACGACTCCGTGTCACCGACGGTATCCTCGGACGAGGGGGCC---GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................CCAGCTGTTGGCCTCGCCGTTAG...............................................................................2383.00240231000
.................GTCCGTGCTCTCGCGTG-----GCGACGA...................................................................................................................................................2492.33210210000
.................GTCCGTGCTCTCGCGTG-----GCGACG....................................................................................................................................................2391.44130130000
........................................................................................................................................................CTCCGTGTCACCGACGGTATCCT..................2391.009090000
.................GTCCGTGCTCTCGCGTG-----GCGAC.....................................................................................................................................................2290.898080000
...........................................................................................CCAGCTGTTGGCCTCGCCGTTA................................................................................2280.756060000
...........................................................................................CCAGCTGTTGGCCTCGCCGTTAGTA.............................................................................2580.635050000
...........................................................................................CCAGCTGTTGGCCTCGCCGTTAGT..............................................................................2480.635050000
........................................................................................................................................................CTCCGTGTCACCGACGGTATCCTCGGA..............2790.565050000
........................................................................................................................................................CTCCGTGTCACCGACGGTATCCTCGG...............2690.565050000
....................................................................................................................TCGC-------------CGGCGCCGTCGGGCCACGA.........................................23110.455050000
........................................................................................................................................................CTCCGTGTCACCGACGGTATCCTCG................2590.444040000
................................TG-----GCGACGAGGAGGATTGGT........................................................................................................................................20150.406021030
........................................................................................................................................................CTCCGTGTCACCGACGGTATC....................2190.333030000
.................GTCCGTGCTCTCGCGTG-----GCG.......................................................................................................................................................2090.333030000
........................................................................................................................................................CTCCGTGTCACCGACGGTATCC...................2290.333030000
................................TG-----GCGACGAGGAGGATTGGTGT......................................................................................................................................22150.335000320
..................TCCGTGCTCTCGCGTG-----GCGACG....................................................................................................................................................2290.333030000
........................................................................................................................................................CTCCGTGTCACCGACGGTATCCTC.................2490.222020000
..........................................................................................................................................................CCGTGTCACCGACGGTATCCTCGGAC.............2690.222200000
...............................GTG-----GCGACGAGGAGGATTGG.........................................................................................................................................20150.203000012
....................................................................................................................TCGC-------------CGGCGCCGTCGGGCC.............................................19110.182200000
....................................................................................................................TCGC-------------CGGCGCCGTCGGGCCACG..........................................22110.182020000
...........................................................................................CCAGCTGTTGGCCTCGCCGT..................................................................................20110.182020000
.............................................................................................................................................TCGGGCCACGACTCCGTGTCACC.............................23110.182200000
................................TG-----GCGACGAGGAGGATTG..........................................................................................................................................18170.183110100
.....................................................................................................................................CGGCGCCGTCGGGCCACGACGT......................................22120.172200000
................................TG-----GCGACGAGGAGGATTGG.........................................................................................................................................19150.132000020
......................TGCTCTCGCGTG-----GCGACGAGGAGGAT............................................................................................................................................26150.132020000
...........................................................................................CCAGCTGTTGGCCTCGCCGTTAC...............................................................................2380.131100000
........................................................................................................TCGCCGTTAGTATCGC-------------CGGC........................................................2080.131010000
...............................................................................................................TAGTATCGC-------------CGGCGCCGTCG.................................................2080.131010000
............................................................................................CAGCTGTTGGCCTCGCCGTTA................................................................................2180.131010000
..................................................................................................TTGGCCTCGCCGTTAGTATCGC-------------CG..........................................................2480.131010000
..................................................................................................TTGGCCTCGCCGTTAGTATCG..........................................................................2180.131010000
...................................................................................................TGGCCTCGCCGTTAGTATCGC-------------CG..........................................................2380.131010000
...............................GTG-----GCGACGAGGAGGATTGA.........................................................................................................................................20170.122000002
.................GTCCGTGCTCTCGCGTG-----GC........................................................................................................................................................1990.111010000
.................................................................................................................................................................ACCGACGGTATCCTCGGACGAGG.........2390.111010000
.....................GTGCTCTCGCGTG-----GCGACGAGG.................................................................................................................................................2290.111010000
..................TCCGTGCTCTCGCGTG-----GCGACGAGGA................................................................................................................................................2690.111010000
...............................................................................................................................................................TCACCGACGGTATCCTCGGACGAGGGGG......2890.111010000
........................................................................................................................................................CTCCGTGTCACCGACGGTAT.....................2090.111010000
...............................................................................................................................................................TCACCGACGGTATCCTCGGAC.............2190.111010000
................................................................................................................................................................CACCGACGGTATCCTCGGACG............2190.111010000
.........................................................................................................................................................TCCGTGTCACCGACGGTATC....................2090.111010000
...............................................................................................................................................................TCACCGACGGTATCCTCGGACG............2290.111001000
.................GTCCGTGCTCTCGCGTG-----GCGACGAGGA................................................................................................................................................2790.111010000
...........................................................................................................................................................CGTGTCACCGACGGTATCCTCGGACT............2690.111010000
.................GTCCGTGCTCTCGCGTG-----GCGA......................................................................................................................................................2190.111010000
...................CCGTGCTCTCGCGTG-----GCGACGAG..................................................................................................................................................2390.111000001
........................................................................................................................................................CTCCGTGTCACCGACGGTATCA...................2290.111010000
..................TCCGTGCTCTCGCGTG-----GCGAC.....................................................................................................................................................2190.111010000
........................................................................................................................................................CTCCGTGTCACCGACGGTA......................1990.111010000
.........................................................................................................................................................TCCGTGTCACCGACGGTATCCTC.................2390.111010000
..................................................................................................................................................................CCGACGGTATCCTCGGACGAGGG........23100.101010000
TCTCGTCAGCGACGGGCGTCCGTGC........................................................................................................................................................................25100.101010000
..................................................GATTGGTGCGATGGCTCCC............................................................................................................................19200.102020000
.................................................GGATTGGTGCGATGGCTCC.............................................................................................................................19200.102020000
....................................................................................................................TCGC-------------CGGCGCCGTCGGGCCACGAC........................................24110.091010000
....................................................................................................................TCGC-------------CGGCGCCGTCGGGCCACGACT.......................................25110.091010000
..................................................................................................................TATCGC-------------CGGCGCCGTCGGGCT.............................................21110.091100000
....................................................................................................................TCGC-------------CGGCGCCGTCGGGCCACGT.........................................23110.091100000
...................................................................................................................................................CACGACTCCGTGTCACCGAC..........................20110.091010000
..........................................................................................TCCAGCTGTTGGCCTCGCCGTT.................................................................................22110.091010000
............CGGGCGTCCGTGCTCTCGCC.................................................................................................................................................................20110.091010000
....................................................................................................................TCGC-------------CGGCGCCGTCGGGCCAC...........................................21110.091010000
.................GTCCGTGCTCTCGCGTG-----GTA.......................................................................................................................................................20110.091010000
................................................................................................................................................GGCCACGACTCCGTGTCAC..............................19110.091010000
............................................................................................CAGCTGTTGGCCTCGCCGTT.................................................................................20110.091010000
...........................................................................................CCAGCTGTTGGCCTCGCCG...................................................................................19110.091010000
...........................................................................................CCAGCTGTTGGCCTCGCCGTT.................................................................................21110.091010000
..............................................................................................................................................CGGGCCACGACTCCGTGTCACC.............................22110.091100000
.............................................................................................................................................TCGGGCCACGACTCCGTGTCAAA.............................23110.091010000
..................................................................................................................TATCGC-------------CGGCGCCGTCGGGCCA............................................22110.091010000
.............................................................TGGCTCCCAG---------------TTCCTCCAGCTGTT.............................................................................................24120.081010000
.........................................................................................CTCCAGCTGTTGGCCTCG......................................................................................18120.081010000
......................TGCTCTCGCGTG-----GCGACGAGGAGGA.............................................................................................................................................25150.071010000
......................TGCTCTCGCGTG-----GCGACGAGGAGA..............................................................................................................................................24150.071010000
.................................G-----GCGACGAGGAGGATTGGC........................................................................................................................................19150.071100000
.........................TCTCGCGTG-----GCGACGAGGAGGAT............................................................................................................................................23150.071010000
..........................CTCGCGTG-----GCGACGAGGAGGATTGG.........................................................................................................................................25150.071010000
..............................CGTG-----GCGACGAGGAGGATTGG.........................................................................................................................................21150.071000100
..........................CTCGCGTG-----GCGACGAGGAGGATTG..........................................................................................................................................24150.071010000
...........................TCGCGTG-----GCGACGAGGAGGTC............................................................................................................................................21150.071010000
.......................GCTCTCGCGTG-----GCGACGAGGAA...............................................................................................................................................22150.071010000
.......................GCTCTCGCGTG-----GCGACGAGGAGGAT............................................................................................................................................25150.071010000
................................TG-----GCGACGAGGAGGATTGGTGA......................................................................................................................................22150.071000001
......................TGCTCTCGCGTG-----GCGACGA...................................................................................................................................................19150.071010000
......................TGCTCTCGCGTG-----GCGACGAGGAGG..............................................................................................................................................24150.071010000
...............................GTG-----GCGACGAGGAGGATTGGT........................................................................................................................................21150.071000100
.................................G-----GCGACGAGGAGGATTGGG........................................................................................................................................19150.071100000
.........................TCTCGCGTG-----GCGACGAGGAGGATTG..........................................................................................................................................25150.071010000
.................................G-----GCGACGAGGAGGATTGGT........................................................................................................................................19150.071010000
..........................CTCGCGTG-----GCGACGAGGAGG..............................................................................................................................................20150.071010000
............................CGCGTG-----GCGACGAGGAGGATTGG.........................................................................................................................................23150.071010000
................................TG-----GCGACGAGGAGGATTGGTT.......................................................................................................................................21150.071000100
.................................G-----GCGACGAGGAGGATTGGTG.......................................................................................................................................20150.071010000
......................TGCTCTCGCGTG-----GCGACGAGGAG...............................................................................................................................................23150.071010000
......................TGCTCTCGCGTG-----GCGACG....................................................................................................................................................18150.071010000
......................TGCTCTCGCGTG-----GCGACGAGT.................................................................................................................................................21150.071010000
.........................TCTCGCGTG-----GCGACGAGGAAA..............................................................................................................................................21150.071010000
................................TG-----GCGACGAGGAGGATTGGTTT......................................................................................................................................22160.061000010
TCTCGTCAGCGACGGGCGTCCAA..........................................................................................................................................................................23180.061010000
TCTCGTCAGCGACGGGCGTCC............................................................................................................................................................................21180.061010000
......................................................GGTGCGATGGCTCCCAG---------------TTCCTCCA...................................................................................................25190.051010000
..............................................GGAGGATTGGTGCGATGG.................................................................................................................................18200.051010000
...........................................CGAGGAGGATTGGTGCGATT..................................................................................................................................20200.051010000
......................................................GGTGCGATGGCTCCCAG---------------TTCC.......................................................................................................21200.051010000
..........................................ACGAGGAGGATTGGTGCG.....................................................................................................................................18200.051010000
..............................................GGAGGATTGGTGCGATGGCTCCCAG---------------...........................................................................................................25200.051010000
..................................................GATTGGTGCGATGGCTCCCA...........................................................................................................................20200.051010000
.................................................GGATTGGTGCGATGGCTCCCA...........................................................................................................................21200.051010000
.............................................AGGAGGATTGGTGCGATGGCTCC.............................................................................................................................23200.051010000
...........................................CGAGGAGGATTGGTGCGATGGCTCCC............................................................................................................................26200.051010000
droWil2
GTCG----------------GTAGTATCGGACCG-----TGAGGTGGAT-----------------------------------------------------------------------------------------------------------------------------ACGGACGAGGAGTCG---ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
GG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGAGGGTGCC---GSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
TGTG--------------------------------------------------------AAGGTGCCCAG---------------TTCTCATTGCTGTTGTCGTTGTTGTTGGTGTC--------------------------------------------------------------------------GSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CT-----------------------------------------------------------------------------------------GTAGCTGTTGCCGTTGCCGTTGCCATTGC-------------TG--------------------------------CGCATCTGCCGAC-------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
TCTC----------------CTCGCTCTCGGACG-----ACAGCGGGAAGCCGTTGAGCGTCTGCTCCATA---------------TTCGCCAAGTCGCGATCCTGGCTACTGGAACCGC-------------C-----------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................CGGACG-----ACAGCGGGAAGCCGTT..........................................................................................................................................2211.001000010
.........................................AGCGGGAAGCCGTTGAGCGT....................................................................................................................................2011.001010000
droBip1
TCTC----------------CTCGCTCTCGGACG-----ACAGCGGGAAGCCGTTGAGCGTCTGCTCCATA---------------TTCGCCAAGTCGCGATCCTGGCTACTGGAACCGC-------------C-----------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGGAGGAGGCC---GSizeHit CountTotal NormTotal
No Reads
droFic1
GGC--------------------------------------GAAGTGGAGGCGTCG-GCGCTCG-TCGTCG---------------GCCCTCCAGCTGCTGGCGTCCCCGCTGGTATCGCGGTCCCCGTCGCC--------------------------------------------GGCG---AGGAG---GSizeHit CountTotal NormTotal
No Reads
droEle1
TTCT---------------------------------------------------------------------------------------TCAGCTTCTGGCGTCCCCCCTGGTGTCGCGATCCCCGTCACC-G-----------------------GTCAGCGAG-------GCGGACGAGGAGTCCACCGSizeHit CountTotal NormTotal
No Reads
droBia1
TCTTGCTC---------------AGGCTCAGGCTCAGGTGCGACGAGGAGTCGCC---------------GTTCGCCGAGCCGCCGTTCTTCAGGCTGTCGTCGCCGTCGTCGTCCTTGC-------------C----------------------------------------------------------GSizeHit CountTotal NormTotal
No Reads
droEug1
TCCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGAGGAGGAGGCC---GSizeHit CountTotal NormTotal
No Reads
droSim2
TC------------------------------------------------------------------------------------------CGGCTGTTGCCATCGCCATTGCTGTCGT-------------CG---------------------------------------------------------GSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
TC------------------------------------------------------------------------------------------CGGCTGTTGCCATCGCCATTGCTGTCGT-------------CG---------------------------------------------------------GSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads

Generated: 05/17/2015 at 11:33 PM