ID:

dps_884

 Coordinate:

2:30219881-30220031 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.6

Flybase annnotation

exon [dpse_GLEANR_6504:2]; CDS [Dpse\GA10707-cds]; intron [Dpse\GA10707-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTTTCCCCAGTTCCCAACGTTAAATAATTTTCATGCACATATTTTGTGTGTTGTTCTGCATTCGATGGCGCTGGCGCTGTCCTCATGAGGCTAGGATACCGACAACTGCTGCGACTGCTACGACTGCTACTCCCACAATATTTGATACCCAACGCGCTCAAACCAACATACCCTTCTACCTAATACTACCCCCACCTTTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTATGATGGACCCAAGCG
*******************************************************************************......((((((..((.((.(((....((.((.((..((.......))...)).))))....))).)).))...)).))))....*************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902012
CNS imaginal disc
 SRR902010
ovaries
 V112
male body		 M059
embryo
 GSM343916
embryo
 M062
head
..........................................................................................................................................TATTTGATACCCAACGCGCTCAAACC....................................................................................... 26 0 1 2.00 2 0 0 2 0 0 0 0
..................................................................................................................................................................................................................................ACGATATGTATGATGGACCCAAGC. 24 0 1 2.00 2 0 2 0 0 0 0 0
........................................ATTTTGTGGGTTGTGGTGCAT.............................................................................................................................................................................................. 21 3 4 1.50 6 2 0 0 4 0 0 0
...............................................................................TCCTCATGAGGCTAGGATACCGACAAC................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................ACGATATGTATGATGGACCCA.... 21 0 1 1.00 1 1 0 0 0 0 0 0
....................................................GTTCTGCATTCGATGGCGCTG.................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................CGATGGCGCTGGCGCTGTC.......................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................ACCGACAACTGCTGCGACTGCTA................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................................CGATGTGAACAGCGCTTGGA............................ 20 0 1 1.00 1 1 0 0 0 0 0 0
......................................ATATTTTGTGTGTTGTTCTGC................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................GGATACCGACAACTGCTGCGA......................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................................CGATGTGAACAGCGCTTG.............................. 18 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................CTACCTAATACTGCCCCCACC....................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................CGATATGTATGATGGACCCAAG.. 22 0 1 1.00 1 0 1 0 0 0 0 0
................................................................................................................................................................................................................TGAACAGCGCTTGGAAGCA........................ 19 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................GGAAGCACGATATGTATGATGGACCC..... 26 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................................CGATGTGAACAGCGCTTGG............................. 19 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................GATGTGAACAGCGCTTGGAA........................... 20 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................................................TATCTGATACCCAACGCGCTCAAACC....................................................................................... 26 1 1 1.00 1 0 0 0 0 1 0 0
..............................................................................................................................................................................................................TGTGAACAGCGCTTGGAAGCACGA..................... 24 0 1 1.00 1 1 0 0 0 0 0 0
.................................................GTTGTTCTGCATTCGATGGCGCT................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
..................................GCAGATATCTTGTGTGTCGTT.................................................................................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 1 0
........................................ATTTTGTGGGTGGTTGTGCAT.............................................................................................................................................................................................. 21 3 13 0.31 4 1 0 0 3 0 0 0
........................................ATTTTGTGTGTGGTGGTGCAT.............................................................................................................................................................................................. 21 3 17 0.29 5 2 0 0 3 0 0 0
.........................................TTTTGTGGGTTGTTGTGCA............................................................................................................................................................................................... 19 2 9 0.11 1 1 0 0 0 0 0 0
....................................ACATATGTTGAGTGTTGT..................................................................................................................................................................................................... 18 2 15 0.07 1 0 0 0 0 0 0 1
...............................................................GAAGGCGCTGGCGCTGTCG......................................................................................................................................................................... 19 2 19 0.05 1 1 0 0 0 0 0 0

Anti-sense strand reads

GAAAGGGGTCAAGGGTTGCAATTTATTAAAAGTACGTGTATAAAACACACAACAAGACGTAAGCTACCGCGACCGCGACAGGAGTACTCCGATCCTATGGCTGTTGACGACGCTGACGATGCTGACGATGAGGGTGTTATAAACTATGGGTTGCGCGAGTTTGGTTGTATGGGAAGATGGATTATGATGGGGGTGGAAATCCCGCTACACTTGTCGCGAACCTTCGTGCTATACATACTACCTGGGTTCGC
***************************************************************************************......((((((..((.((.(((....((.((.((..((.......))...)).))))....))).)).))...)).))))....******************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
 M059
embryo
................................................................................................................................................................TTGGTTGTATGGGAAGATGGA...................................................................... 21 0 1 2.00 2 2 0 0
....................................................................................................................................................GGTTGCGCGAGTTTGGTTGTA.................................................................................. 21 0 1 2.00 2 2 0 0
..............................................................................CAGGAGTGCTCCGGTCCTAT......................................................................................................................................................... 20 2 1 1.00 1 1 0 0
.............................................CACACAACAAGACGTAAGCTA......................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0
..................................................................................................................................................................................GGATTATGTTGGGGGTGC....................................................... 18 2 2 0.50 1 0 1 0
............................................................................................................GACGCAGACGATGTTCACGAT.......................................................................................................................... 21 3 3 0.33 1 1 0 0
.........................................................................................................................TTGCCGATGAGGGTGTTAT............................................................................................................... 19 2 3 0.33 1 1 0 0
................................................................................................TTGGCTGGTGACGACGCT......................................................................................................................................... 18 2 5 0.20 1 1 0 0
...................................................................TGCGACCCCGACAGGAGAAC.................................................................................................................................................................... 20 3 10 0.10 1 0 1 0
GAAAGGGGTCCGGGGTTG......................................................................................................................................................................................................................................... 18 2 10 0.10 1 1 0 0
....................................................................................................................................................CGTGGGGCGAGTTTGGTTG.................................................................................... 19 3 20 0.05 1 1 0 0
............................................................CAGCTACCCCGACCGCCACA........................................................................................................................................................................... 20 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:30219831-30220081 + dps_884 CTTT-CCCCAGTTCCCA--------ACGTTAAATAATTTTC----------------------------------------------------ATGCA---CATATTTTGTGTGTTGTTCTGCATT----CG----ATGGCGCTGGCGCTGTCCTC--AT-----GAGGCTAGGATACCGA--CAACTGCTG------------------------CGACTG---CTACGACTGCTACTCCCAC---A-----ATATTTGAT-------------------------ACCCAACG--------CGC-----TCAA------A------------------------CC---------AACATACC-------------CTTCTACCT--AATACTACCCCCACCTTTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTATGATGGACCCAAGCG---
droPer2 scaffold_6:5609159-5609409 + CTTT-CCCCAGTTCCCA--------ACGTTAAATAATTTTC----------------------------------------------------ATGCA---CATATTTTGTGTGTTGTTCTGCATT----CG----ATGGCGCTGGCGCTGTCCTC--AT-----GAGGCTAGGATACCGA--CAACTGCTG------------------------CGACTG---CTACGACTGCTACTCCCAC---A-----ATATTTGAT-------------------------ACCCAACG--------CGC-----TCAA------A------------------------CC---------AACATACC-------------CTTCTACCT--AATACTACCCCCACCTTTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTATGATGGACCCAAGCG---
droWil2 scf2_1100000004943:16547090-16547191 - A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAAGATCA-AAT----CTT---------------------------CTACTG---CAACT---ACTACCCCCTCCTCA--------------------------------------------------------------------------------------------------------------------------------------------------------ACTCTCTAGGGTGATGTGAACAGCGCTTGGAAGCATGATATGTACGATGGACCCAAACG---
droVir3 scaffold_13047:16755855-16756163 - dvi_17258 TCTT-TCCCCGTTTATA----A--CACGTTCAATATTTTTCGTTTGCACTT-GTCAAAACAACCAAAGAATGGCAGTCAATCAATGTACATTCA-----TACATATTTAGTGTT----TCTGCATTTCT--GCG--ATGGC---------GTCCTC--TTGAT--GTGGCTAGGATAC-AA--CAACTG---------------------------CTGCTGCTGCTACT---ACTACATCTCCCAC------ATATTTGATCAGAAAC-------TTGTCCCC---ACGCGTAC--------CGT-----TCGA------A------------------------TCAACC-----AACAA--------------ATCTTCTACCT--AAT------CCCCCCTTTAGGGTGATGTAAACAGCGCTTGGAAGCATGATATGTACGATGGTCCAAAACGAAA
droMoj3 scaffold_6540:13055186-13055424 - GTC---------------------------------------------------------------------------AATCAATGTACATTCA-----TGCATATTTAGTGTT----TCTGCATTGCTTCG----ATGGC---------GTCCTC--TTGAT--GTGGCTAGGATAC-AA--CAACTG---------------------------CTGCTG---CTGCT---ACTACATCTCCCAC------ATATTTGATCAGAAAC-------TTCTCCCC---ACGCGTTC--------CGT-----TCGA------A------------------------TCAACC-----AACAA--------------ATCTTCTACCT--AAT------CCCCCCTTTAGGGTGATGTAAACAGCGCTTGGAAACATGATATGTACGATGGTCCAAAACGAAA
droGri2 scaffold_14906:3184342-3184647 - TC----------------------------------------------------------------------------AATCAATATACATTCATACATATAATATTTAGTGTC----TGCAT--TTCTACGAG--ATGGCGTCTCCTCTG-------TTGATATATGGCTAGGATAC-AA--CAACTGCTGCTGCTACCACTGCTACTACTA---CTACTA---CTACT---ACTACACCCTCCAC------ATATTTGATCAGAAAAATATTGATTGTCCCCAACACGCGAATGTCCCGAATGT-----TCGAAATCGAATCGA--------------AA----CCAACA-----AACAA--------------ATCTTCTACCTATAATACTACCCC--CCTCTAGGGCGATGTAAACAGCGCATGGAAGCATGATATGTACGATGGTCCAAAGCG---
droAna3 scaffold_13340:2687722-2687978 - CTTT-TCCC-GT-----------TAACGTT------TTTCT----------------------------------------------------AAGCAAAACATTTCTAGAGT-----TCCGC--A----CCTT--ATGGC--------AGTCG----TT-----GAGGCTAGGATAC-GA--CCACTGCTA------CCATTGCTACTGCCACTGTCACTG---TCACT---GCTACTCCCTCC-----------------------------------------------TCG--------CGTTCGACTCGA------ACCAACCAAACAACCAACAAACCAACC---------AACAT--------------ACCCTCTACCT--AATACTACCCCCACCTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCCAAGCG---
droBip1 scf7180000396712:1650977-1651203 + CTTT-TCCC-GT-----------TTACGTT------TTTCT----------------------------------------------------AAGCAAAACATTTCTAGTGT-----TCTGG--A----CCTTAAATGGC--------AGTCCATTGTTGAA--GAGGCTAGGATAC---------TG---------------------------TCACTG---TCACT---GCTACTCCCTCC-----------------------------------------------TCG--------CGTTCGACTCGA------ACCAACC------------AACCAACC---------AACAT--------------ACCCTCTACCT--AATACTACCCCCACCTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCCAAACG---
droKik1 scf7180000302639:2013783-2014005 + CTCTTTCC-----------------CAGTT-------TTTCGCGTGAATC-------------------------------------------------------TCTCCTGTC----A---C--T----C-----TTGGC--------AGTCCTC--TT-----GAGGCTAGGATAC-GATGCAACTG---------------------------C---TG---CCACT---GCTAATCCCACCAA------ACATTTGAT-------------------------ACGCATCG--------CGTG---ATCGA------A------------------------CCAACAAACACAACATACC-------------CTTCTACCT--AATACTACCCCCACCTCTAGGGCGATGTAAACAGCGCATGGAAGCATGATATGTATGACGGACCCAAGCG---
droFic1 scf7180000453835:371464-371729 - TTCT-TAA-----------CGTCTCACGTT-------TTTCACGTGAATATTGTC----------------------CAGTTAAC--------A-----AGAATTTCTAGTGTC----TCCGC--T----CGAT--ATGGC--------AGTCCTC--TT-----GAGGCTAGGATAC-GATGCAACTG---------------------------CTACTG---CCACG---GCTACTCCCGCCAAATACATATTGTTGAT-------------------------ACGCCTCG--------CGT-----TCGA------A------------------------CCAACAA-CA-GACATACCCAT------CTACCTTCTACCT--AATACTACCCCCACCTCTAGGGCGATGTAAACAGCGCTTGGAAGCACGATATGTACGACGGGCCGAAGCG---
droEle1 scf7180000491104:1543171-1543398 + CC------------------------------------------------TTACC----------------------CAGTTCAA--------T-----AGCATTTTTAGAGTC----TCCGC--T----CGAT--ATGGC--------TGTCCTC--TT-----GAGGCAAAGATAA-GATGCAACTG---------------------------------------------CTACTCCCGCCAAATACATATAGTTGAT-------------------------ACGCCTCG--------CATAC--CGCGA------A------------------------CCAACAA-GAGAACATACCCAT------CTACCTTCTACCT--AATACTACC-CCACCTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCGAAGCG---
droRho1 scf7180000779912:4807-5067 + CA-----------------AGTCTCACTAT-------TTCCACGTGAATCTTACC----------------------CAGTTAAC--------A-----AGCATTTCTAGTGTC----TCCGC--T----CGAT--ATGGG--------TGTCCTC--TT-----AAGGCCAAGATAC-GATGCAACTG---------------------------CTACTG---CCACG---GCTACTCCCGCCAAATCCATATAATTGAT-------------------------ACGTCTCG--------CGT-----TCGA------A------------------------CCAACAA-CAGAACATACCCAT------CTACCTTCTACCT--AATACTACC-CCACCTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCTAAGCG---
droBia1 scf7180000302155:1738030-1738287 + CCCC-TCT-----------CGTCTCACGTT-------TTCCCCGTGAGCCCCACC----------------------CAGTAAAC--------A-----AGCATTTCTAGTGTC----TCCGC--T----CGGT--ATGGC--------TGTCCTC--TT-----GAGGCTAGGACAC-GATGCACCTG---------------------------CTACTG---CCACG---GCTACTCCCGCCAAAAACAT-TAGTCGAT-------------------------ACGCCTCG--------CGT-----TCGA------A------------------------CCAACA-----GACATACCCAT------CTACCTTCTACCT--AATACTACC----CCTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCGAAGAG---
droTak1 scf7180000415671:66906-67167 + CT-----------------CGCCTCACGTT-------TTCCGCGTGAACCCTACC----------------------CAGTTAAC--------A-----AGCATTTCTAGTGTC----TCCGC--T----CGGT--GTGGC--------TGTCCTC--TT-----GGGGCTAGGATAC-GATGCAACTG---------------------------CTACTG---CCACG---GCTACTCCCGCCAAATACATATAGTTGAT-------------------------ACGCCTCG--------CGT-----TCGA------T------------------------CCAACAA-CA-GACATACCCATCTCCATCTACCTTCTACCT--AATACTACC-----CTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCGAAGAG---
droEug1 scf7180000409796:66520-66782 - CCTT-TCAC-GTCT---CATGATTCACGTT-------TTCTACGTGAACCTTACC----------------------CAGTTAAC--------A-----AGAATTTCTAGTGTC----TTCGC--T----CGAT--ATGGC--------TGTCCTC--TT-----GAGGCTAGGATAC-GATGCAAC---------------------------------TG---CCACG---GCTACTCCCGCCAAATACATATAGTTGAT-------------------------ACGCCTCG--------CGT-----TCGA------A------------------------CCAACAA-CA-GACATACCCAT----------CTTCTACCT--AATACTACCCCCACCTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCAAAGAG---
dm3 chr3R:2905128-2905390 - CTC----AC-GTCT---CACGCCTCACGTT-------TTCCACGTGAACCATACC----------------------CAGTTAAC--------A-----AGCATTTCTAGTGTC----TCCGC--T----CAAT--ATGGC--------TGTCCTCTCTT-----GTGGCTAGGATAC-GATGCAACTG---------------------------CTACTG---CAACG---GCTACTCCCGCCACATACATATAGTTGAT-------------------------ACGCGCAG--------CGT-----TCGA------A-----------------------------------GACATACCCAT------CTACCTTCTACCT--AATACTACCCCCACCTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCGAAGAG---
droSim2 3r:2830528-2830779 - dsi_25609 CA-----------------CGCCTCACGTT-------TTCCACGTGAACCCCACC----------------------CAGTTAAC--------A-----AGCATTTCTAGTGTC----TCCGC--T----CAAT--ATGGC--------TGTCCTC--TT-----GGGGCTAGGATAC-GATGCAACTG---------------------------CTACTG---CAACG---GCTACTCCCGCCACATACATATAGTTGAT-------------------------ACGCGCAG--------CGT-----TCGA------A-----------------------------------GACATACCCAT------CTACCTTCTACCT--AATACTACCCCCACCTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCGAAGAG---
droSec2 scaffold_6:2996964-2997215 - CA-----------------CGCCTCACGTT-------TTCCACGTGAACCCCACC----------------------CAGTTAAC--------A-----AGCATTTCTAGTGTC----TCCGC--T----CAAT--AGTGC--------TGTCCCC--TT-----GGGGCTAGGATAC-GATGCAACTG---------------------------CTACTG---CAACG---GCTACTCCCGCCACATACATATAGTTGAT-------------------------ACGCGCAG--------CGT-----TCGA------A-----------------------------------GACATACCCAT------CTACCTTCTACCT--AATACTACCCCCACCCATAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCGAAGAG---
droYak3 3R:7453857-7454105 + CGC-------------------TTCACGT--------TTCCCCGTGAACTCTACC----------------------CAGTTAAC--------A-----AGCATTTCTAGTGTC----TCCGC--T----CAAT--ATGGC--------TGTCCTC--TT-----GGGGCTAGGATAC-GATGCAACTG---------------------------CTACTG---CAACG---GCTACTCCCGCCACATACATATAGTTGAT-------------------------ACGCCCAG--------CGT-----TCGA------A-----------------------------------GAAATACCCAT------CTACCTTCTACCT--AATACTACCCCCACCTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTATGACGGACCAAAGAG---
droEre2 scaffold_4770:3166661-3166912 - CA-----------------CGCTTCACGCT-------TTCCACGTGAACCCTACC----------------------CAGTTAAT--------A-----AGCATTTCTAGTGTC----TCCGC--T----CAAT--ATGGC--------ATTCCTC--TT-----GGGGCTAGGATAC-GATGCAACTG---------------------------CTACTG---CAACG---GCTACTCCCGCCACATACATATAGTTGAT-------------------------ACGCCCAG--------CGT-----TCGA------A-----------------------------------GACATACCCAT------CTACCTTCTACCT--AATACTACCCCCACCTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCGAAGAG---

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CTTT-CCCCAGTTCCCA--------ACGTTAAATAATTTTC----------------------------------------------------ATGCA---CATATTTTGTGTGTTGTTCTGCATT----CG----ATGGCGCTGGCGCTGTCCTC--AT-----GAGGCTAGGATACCGA--CAACTGCTG------------------------CGACTG---CTACGACTGCTACTCCCAC---A-----ATATTTGAT-------------------------ACCCAACG--------CGC-----TCAA------A------------------------CC---------AACATACC-------------CTTCTACCT--AATACTACCCCCACCTTTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTATGATGGACCCAAGCG---SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................TATTTGAT-------------------------ACCCAACG--------CGC-----TCAA------A------------------------CC---------.........................................................................................................2612.0020000000200
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATATGTATGATGGACCCAAGC....2412.0020000000002
.......................................................................................................................................................TCCTC--AT-----GAGGCTAGGATACCGA--CAAC...................................................................................................................................................................................................................................................................................2711.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATATGTATGATGGACCCA.......2111.0010100000000
....................................................................................................................GTTCTGCATT----CG----ATGGCGCTG.............................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................CG----ATGGCGCTGGCGCTGTC.....................................................................................................................................................................................................................................................................................................................1911.0010100000000
................................................................................................................................................................................ACCGA--CAACTGCTG------------------------CGACTG---CTA..........................................................................................................................................................................................................................................2311.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGATGTGAACAGCGCTTGGA...............................2011.0010100000000
......................................................................................................ATATTTTGTGTGTTGTTCTGC...................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................GGATACCGA--CAACTGCTG------------------------CGA...................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGATGTGAACAGCGCTTG.................................1811.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATATGTATGATGGACCCAAG.....2211.0010000000001
................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACAGCGCTTGGAAGCA...........................1911.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAGCACGATATGTATGATGGACCC........2611.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGATGTGAACAGCGCTTGG................................1911.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGAACAGCGCTTGGAA..............................2011.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAACAGCGCTTGGAAGCACGA........................2411.0010100000000
.................................................................................................................GTTGTTCTGCATT----CG----ATGGCGCT..............................................................................................................................................................................................................................................................................................................................2311.0010100000000
droPer2
CTTT-CCCCAGTTCCCA--------ACGTTAAATAATTTTC----------------------------------------------------ATGCA---CATATTTTGTGTGTTGTTCTGCATT----CG----ATGGCGCTGGCGCTGTCCTC--AT-----GAGGCTAGGATACCGA--CAACTGCTG------------------------CGACTG---CTACGACTGCTACTCCCAC---A-----ATATTTGAT-------------------------ACCCAACG--------CGC-----TCAA------A------------------------CC---------AACATACC-------------CTTCTACCT--AATACTACCCCCACCTTTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTATGATGGACCCAAGCG---SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................A-----ATATTTGAT-------------------------ACCCAACG--------CGC-----T......................................................................................................................................................2211.001010000
...............................................................................................................................................................................TACCGA--CAACTGCTG------------------------CGACTG---.............................................................................................................................................................................................................................................2111.001100000
........................................................................................................................TGCATT----CG----ATGGCGCTGGCGC.........................................................................................................................................................................................................................................................................................................................2111.001010000
droWil2
A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAAGATCA-AAT----CTT---------------------------CTACTG---CAACT---ACTACCCCCTCCTCA--------------------------------------------------------------------------------------------------------------------------------------------------------ACTCTCTAGGGTGATGTGAACAGCGCTTGGAAGCATGATATGTACGATGGACCCAAACG---SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................CTAGGGTGATGTGAACAGCGCTT..................................2311.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGAACAGCGCTTGGAAGC............................2211.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGAACAGCGCTTGGAAGC............................2111.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATGTGAACAGCGCT...................................1811.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGATATGTACGATGGACCC........2111.00110000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAGCATGATATGTACGATG.............2211.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAGCATGATATGTACGATGGA...........2411.00100100
droVir3
TCTT-TCCCCGTTTATA----A--CACGTTCAATATTTTTCGTTTGCACTT-GTCAAAACAACCAAAGAATGGCAGTCAATCAATGTACATTCA-----TACATATTTAGTGTT----TCTGCATTTCT--GCG--ATGGC---------GTCCTC--TTGAT--GTGGCTAGGATAC-AA--CAACTG---------------------------CTGCTGCTGCTACT---ACTACATCTCCCAC------ATATTTGATCAGAAAC-------TTGTCCCC---ACGCGTAC--------CGT-----TCGA------A------------------------TCAACC-----AACAA--------------ATCTTCTACCT--AAT------CCCCCCTTTAGGGTGATGTAAACAGCGCTTGGAAGCATGATATGTACGATGGTCCAAAACGAAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................GATGTAAACAGCGCTTGGAAGCA...........................2313.003000000000030000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAGCGCTTGGAAGCATGAT.......................2213.003000000000000010000000000000000000001010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACAGCGCTTGGAAGCATGATATG....................2612.002000000000000000000001000000000000000010000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GATGTAAACAGCGCTTGGAA..............................2012.002000000000001000010000000000000000000000000000000000000000000000
.......................................................AAAACAACCAAAGAATGGCA...................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATATGTACGATGGTCCAAAAC....2411.001100000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................AACC-----AACAA--------------ATCTTCTACCT--AAT------CCCCCC..........................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAGCGCTTGGAAGCA...........................1811.001000000000000010000000000000000000000000000000000000000000000000
................................................................................................................................T--GCG--ATGGC---------GTCCTC--TTGAT--GTGGCT...................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GATGTAAACAGCGCTTGGAAGCATGAT.......................2711.001000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAGCATGATATGTACGATGGT...........2311.001000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCTTGGAAGCATGATATGTACGATG.............2711.001000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGGAAGCATGATATGTACGATGGT...........2711.001000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................CATTTCT--GCG--ATGGC---------GTCCT...................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000001000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GATGTAAACAGCGCTTGGA...............................1911.001000000000000010000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATGTACGATGGTCCAA.......1911.001000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAGCATGATATGTACGATGGTC..........2511.001000000000000000000000000000000001000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGATGGTCCAAAACGAAA2111.001000000000000000000000100000000000000000000000000000000000000000
................................................................................................................TT----TCTGCATTTCT--GCG--ATGGC---------GTCC....................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAGCGCTTGGAAGCAT..........................1911.001000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................CTTTAGGGTGATGTAAACAGC......................................2111.001000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................CG--ATGGC---------GTCCTC--TTGAT--GTG......................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................TGATGTAAACAGCGCTTGGAAGCATG.........................2611.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................GTACATTCA-----TACATATTTAGT...............................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................ATTTTTCGTTTGCACTT-GTCAAA....................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
........................................................AAACAACCAAAGAATGGCAGTC................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGAAGCATGATATGTACGATGGT...........2611.001000000000001000000000000000000000000000000000000000000000000000
...........................................................................................................................................................C--TTGAT--GTGGCTAGGATAC-A..........................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGGAAGCATGATATGTAC.................2111.001000000000000000000000000000000000000100000000000000000000000000
...................................................................................................TACATATTTAGTGTT----TCTGCA..................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGCTTGGAAGCATGAT.......................1911.001000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAGCGCTTGGAAGCATG.........................2011.001000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................T----TCTGCATTTCT--GCG--ATGGC---------GTCCT...................................................................................................................................................................................................................................................................................................................2511.001000010000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACAGCGCTTGGAAGCATGATA......................2411.001000000000000000000000000000000000001000000000000000000000000000
droMoj3
GTC---------------------------------------------------------------------------AATCAATGTACATTCA-----TGCATATTTAGTGTT----TCTGCATTGCTTCG----ATGGC---------GTCCTC--TTGAT--GTGGCTAGGATAC-AA--CAACTG---------------------------CTGCTG---CTGCT---ACTACATCTCCCAC------ATATTTGATCAGAAAC-------TTCTCCCC---ACGCGTTC--------CGT-----TCGA------A------------------------TCAACC-----AACAA--------------ATCTTCTACCT--AAT------CCCCCCTTTAGGGTGATGTAAACAGCGCTTGGAAACATGATATGTACGATGGTCCAAAACGAAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................GTCCTC--TTGAT--GTGGCTAGG................................................................................................................................................................................................................................................................................................2011.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTAAACAGCGCTTGGAAACA...........................2011.001010000
...................................................................................................................................G----ATGGC---------GTCCTC--TTGAT--GTGG.....................................................................................................................................................................................................................................................................................................2111.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGTACGATGGTCCAAAA.....2011.001100000
droGri2
TC----------------------------------------------------------------------------AATCAATATACATTCATACATATAATATTTAGTGTC----TGCAT--TTCTACGAG--ATGGCGTCTCCTCTG-------TTGATATATGGCTAGGATAC-AA--CAACTGCTGCTGCTACCACTGCTACTACTA---CTACTA---CTACT---ACTACACCCTCCAC------ATATTTGATCAGAAAAATATTGATTGTCCCCAACACGCGAATGTCCCGAATGT-----TCGAAATCGAATCGA--------------AA----CCAACA-----AACAA--------------ATCTTCTACCTATAATACTACCCC--CCTCTAGGGCGATGTAAACAGCGCATGGAAGCATGATATGTACGATGGTCCAAAGCG---SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................................................................................................CTACGAG--ATGGCGTCTCCTCTG-------T...............................................................................................................................................................................................................................................................................................................2311.00110
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAGCATGATATGTACGA...............2111.00110
droAna3
CTTT-TCCC-GT-----------TAACGTT------TTTCT----------------------------------------------------AAGCAAAACATTTCTAGAGT-----TCCGC--A----CCTT--ATGGC--------AGTCG----TT-----GAGGCTAGGATAC-GA--CCACTGCTA------CCATTGCTACTGCCACTGTCACTG---TCACT---GCTACTCCCTCC-----------------------------------------------TCG--------CGTTCGACTCGA------ACCAACCAAACAACCAACAAACCAACC---------AACAT--------------ACCCTCTACCT--AATACTACCCCCACCTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCCAAGCG---SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................CTGCTA------CCATTGCTACTGCCA.........................................................................................................................................................................................................................................................2111.001010000
......................................................................................................................................................GTCG----TT-----GAGGCTAGGATAC-...........................................................................................................................................................................................................................................................................................1911.001100000
........................................................................................................TTCTAGAGT-----TCCGC--A----CCTT--ATGGC--------AGTC.....................................................................................................................................................................................................................................................................................................................2811.001010000
......................................................................................................................................................................................................................................................................................................................CTCGA------ACCAACCAAACAACCAAC...........................................................................................................................2311.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAGCACGATATGTACGACGGACC.........2611.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCGCTTGGAAGCACGATA......................2111.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACGATATGTACGACGG............1811.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGAACAGCGCTTGGAAGCACGA........................2611.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAGCGCTTGGAAGCACG.........................2011.001001000
droBip1
CTTT-TCCC-GT-----------TTACGTT------TTTCT----------------------------------------------------AAGCAAAACATTTCTAGTGT-----TCTGG--A----CCTTAAATGGC--------AGTCCATTGTTGAA--GAGGCTAGGATAC---------TG---------------------------TCACTG---TCACT---GCTACTCCCTCC-----------------------------------------------TCG--------CGTTCGACTCGA------ACCAACC------------AACCAACC---------AACAT--------------ACCCTCTACCT--AATACTACCCCCACCTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCCAAACG---SizeHit CountTotal NormTotal
No Reads
droKik1
CTCTTTCC-----------------CAGTT-------TTTCGCGTGAATC-------------------------------------------------------TCTCCTGTC----A---C--T----C-----TTGGC--------AGTCCTC--TT-----GAGGCTAGGATAC-GATGCAACTG---------------------------C---TG---CCACT---GCTAATCCCACCAA------ACATTTGAT-------------------------ACGCATCG--------CGTG---ATCGA------A------------------------CCAACAAACACAACATACC-------------CTTCTACCT--AATACTACCCCCACCTCTAGGGCGATGTAAACAGCGCATGGAAGCATGATATGTATGACGGACCCAAGCG---SizeHit CountTotal NormTotal
No Reads
droFic1
TTCT-TAA-----------CGTCTCACGTT-------TTTCACGTGAATATTGTC----------------------CAGTTAAC--------A-----AGAATTTCTAGTGTC----TCCGC--T----CGAT--ATGGC--------AGTCCTC--TT-----GAGGCTAGGATAC-GATGCAACTG---------------------------CTACTG---CCACG---GCTACTCCCGCCAAATACATATTGTTGAT-------------------------ACGCCTCG--------CGT-----TCGA------A------------------------CCAACAA-CA-GACATACCCAT------CTACCTTCTACCT--AATACTACCCCCACCTCTAGGGCGATGTAAACAGCGCTTGGAAGCACGATATGTACGACGGGCCGAAGCG---SizeHit CountTotal NormTotal
No Reads
droEle1
CC------------------------------------------------TTACC----------------------CAGTTCAA--------T-----AGCATTTTTAGAGTC----TCCGC--T----CGAT--ATGGC--------TGTCCTC--TT-----GAGGCAAAGATAA-GATGCAACTG---------------------------------------------CTACTCCCGCCAAATACATATAGTTGAT-------------------------ACGCCTCG--------CATAC--CGCGA------A------------------------CCAACAA-GAGAACATACCCAT------CTACCTTCTACCT--AATACTACC-CCACCTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCGAAGCG---SizeHit CountTotal NormTotal
No Reads
droRho1
CA-----------------AGTCTCACTAT-------TTCCACGTGAATCTTACC----------------------CAGTTAAC--------A-----AGCATTTCTAGTGTC----TCCGC--T----CGAT--ATGGG--------TGTCCTC--TT-----AAGGCCAAGATAC-GATGCAACTG---------------------------CTACTG---CCACG---GCTACTCCCGCCAAATCCATATAATTGAT-------------------------ACGTCTCG--------CGT-----TCGA------A------------------------CCAACAA-CAGAACATACCCAT------CTACCTTCTACCT--AATACTACC-CCACCTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCTAAGCG---SizeHit CountTotal NormTotal
No Reads
droBia1
CCCC-TCT-----------CGTCTCACGTT-------TTCCCCGTGAGCCCCACC----------------------CAGTAAAC--------A-----AGCATTTCTAGTGTC----TCCGC--T----CGGT--ATGGC--------TGTCCTC--TT-----GAGGCTAGGACAC-GATGCACCTG---------------------------CTACTG---CCACG---GCTACTCCCGCCAAAAACAT-TAGTCGAT-------------------------ACGCCTCG--------CGT-----TCGA------A------------------------CCAACA-----GACATACCCAT------CTACCTTCTACCT--AATACTACC----CCTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCGAAGAG---SizeHit CountTotal NormTotal
No Reads
droTak1
CT-----------------CGCCTCACGTT-------TTCCGCGTGAACCCTACC----------------------CAGTTAAC--------A-----AGCATTTCTAGTGTC----TCCGC--T----CGGT--GTGGC--------TGTCCTC--TT-----GGGGCTAGGATAC-GATGCAACTG---------------------------CTACTG---CCACG---GCTACTCCCGCCAAATACATATAGTTGAT-------------------------ACGCCTCG--------CGT-----TCGA------T------------------------CCAACAA-CA-GACATACCCATCTCCATCTACCTTCTACCT--AATACTACC-----CTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCGAAGAG---SizeHit CountTotal NormTotal
No Reads
droEug1
CCTT-TCAC-GTCT---CATGATTCACGTT-------TTCTACGTGAACCTTACC----------------------CAGTTAAC--------A-----AGAATTTCTAGTGTC----TTCGC--T----CGAT--ATGGC--------TGTCCTC--TT-----GAGGCTAGGATAC-GATGCAAC---------------------------------TG---CCACG---GCTACTCCCGCCAAATACATATAGTTGAT-------------------------ACGCCTCG--------CGT-----TCGA------A------------------------CCAACAA-CA-GACATACCCAT----------CTTCTACCT--AATACTACCCCCACCTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCAAAGAG---SizeHit CountTotal NormTotal
No Reads
dm3
CTC----AC-GTCT---CACGCCTCACGTT-------TTCCACGTGAACCATACC----------------------CAGTTAAC--------A-----AGCATTTCTAGTGTC----TCCGC--T----CAAT--ATGGC--------TGTCCTCTCTT-----GTGGCTAGGATAC-GATGCAACTG---------------------------CTACTG---CAACG---GCTACTCCCGCCACATACATATAGTTGAT-------------------------ACGCGCAG--------CGT-----TCGA------A-----------------------------------GACATACCCAT------CTACCTTCTACCT--AATACTACCCCCACCTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCGAAGAG---SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................TATAGTTGAT-------------------------ACGCGCAG--------CGT-----TCGA------A-----------------------------------.........................................................................................................26134.00340000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101003000000000000000000000000000000000000000300130000000420000000200000000000000000000000000000000000000000000000000000000000000000000001000000100000000000002000100000010002500000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CTAGGGCGATGTGAACAGCGC....................................21126.00260000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001000000000000000000000000000000000000000000010000000000000000000000000000201000000000040000000000000000000001000000000000002000000000000100000000000000000000000000000010201001001002011010
............................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGAACAGCGCTTGGAAGCACGA........................26122.00220000000000000000000000010000000000000000000000010000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100003000000000000000000000000100100000000000000000000000000100000000000000000000000000000000000000000000000040000100001000000100001011100010
................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACAGCGCTTGGAAGCACG.........................21120.00200000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000100000000000000000000000000000010001000000000000000000000000000000000000000000000000010000100000030002100010010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCACGATATGTACGACGGACCGAAGA....28119.001900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................GTTGAT-------------------------ACGCGCAG--------CGT-----TCGA------.............................................................................................................................................21115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000100000000000000000000000000000000000000000000000000000000000000010000000000000000000000200000000000000100000010000000110002001000000000020
.............................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGAACAGCGCTTGGAAGC............................21112.00120000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000001000000000000000000000000000000000010000000000000000000000000000000000000000000020000000000011000100000010000
............................................................................................................................................................................................................................................................TATAGTTGAT-------------------------ACGCGCAG--------CGT-----TCGA------.............................................................................................................................................25112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000100000000011200000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACAGCGCTTGGAAGCACGATATG....................26112.00120000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200030000001001000000000000001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTACGACGGACCGAAGAG---20111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAACAGCGCTTGGAAGCA...........................21110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000001000000000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000200000000000002000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTACGACGGACCGAAGAG---2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000100000000000000000000000000000000000000000000010000000000000000000000000000001000000000000000000000
...............................................................................................................................................................................................................................................................AGTTGAT-------------------------ACGCGCAG--------CGT-----TCGA------.............................................................................................................................................2218.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000000000000001000000000000000000000000000000001000000000001000000000000001000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAGCGCTTGGAAGCACGATATG....................2518.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000020003000000000000000110000
......................................................................................................................................................................................................................................................................................................................................................................................................................TAGGGCGATGTGAACAGCGCT...................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000010000000000000000000000000000000000000000000000000000100000000000001010010000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAACAGCGCTTGGAAGCACGATA......................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000100000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000010000000000010000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CCTCTAGGGCGATGTGAACAG.......................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................T--ATGGC--------TGTCCTCTCTT-----GTGG.....................................................................................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAGCGCTTGGAAGCACGAT.......................2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGATGTGAACAGCGCTTGGAA..............................2116.0060000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000110000000000010000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATATGTACGACGGACCGAAGA....2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000051000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCGCTTGGAAGCACGATATG....................2416.0060000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000020000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
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.................................................................................................................................................................................................................................................................TTGAT-------------------------ACGCGCAG--------CGT-----TCGA------.............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGAACAGCGCTTGGAAGCACGAT.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CCTCTAGGGCGATGTGAACAGCGCT...................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GCGATGTGAACAGCGCTTGGA...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................CAAT--ATGGC--------TGTCCTCTCTT-----GTGGC....................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TCCGC--T----CAAT--ATGGC--------TGTCCTCTCTT-----GT.......................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGAACAGCGCTTGGAAGCAC..........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCACGATATGTACGAA..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................T--ATGGC--------TGTCCTCTCTT-----GTGGCTAG.................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................T--AATACTACCCCCACCTCTAG.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................GATAC-GATGCAACTG---------------------------CTACTG---C............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGATGTGAACAGCGCTTGGAAA.............................2211.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGATGTGAACAGCGCTTGGAAT.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGAACAGCGCTTGGAAGCACGA........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................CATTTCTAGTGTC----TCCGC--T----CA..........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..........................................................................................................................................GGC--------TGTCCTCTCTT-----GTGG.....................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TAGTTGAT-------------------------ACGCGCAG--------CGT-----TCGA------A-----------------------------------GACA.....................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................CTACCT--AATACTACCCCCAC...........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACAGCGCTTGGAAGCA...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................T--ATGGC--------TGTCCTCTCTT-----GTGGC....................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGGAAGCACGATATGTACGA...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................ATAGTTGAT-------------------------ACGCGCAG--------CGT-----TCGA------A-----------------------------------.........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................TCCCGCCACATACATATAGTTGAT-------------------------ACGCG..........................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................AG--------CGT-----TCGA------A-----------------------------------GACATACCCAT------C.......................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
droSim2
CA-----------------CGCCTCACGTT-------TTCCACGTGAACCCCACC----------------------CAGTTAAC--------A-----AGCATTTCTAGTGTC----TCCGC--T----CAAT--ATGGC--------TGTCCTC--TT-----GGGGCTAGGATAC-GATGCAACTG---------------------------CTACTG---CAACG---GCTACTCCCGCCACATACATATAGTTGAT-------------------------ACGCGCAG--------CGT-----TCGA------A-----------------------------------GACATACCCAT------CTACCTTCTACCT--AATACTACCCCCACCTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCGAAGAG---SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................TACATATAGTTGAT-------------------------ACGCGCAG--------CGT-----T......................................................................................................................................................2612.00200000002000000000
..........................................................................................................................................................................TAGGATAC-GATGCAACTG---------------------------CTACTG---CAAC.........................................................................................................................................................................................................................................2812.00200000001000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACGATATGTACGACGGACC.........2212.00220000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACAGCGCTTGGAAGCACGATATGTA..................2812.00200000000020000000
..............................................................................................................................................................................ATAC-GATGCAACTG---------------------------CTACTG---.............................................................................................................................................................................................................................................2012.00210000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGATATGTACGACGGACC.........2011.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATATGTACGACGGACCGAAG.....2311.00100100000000000000
.............................................................................................................................T----CAAT--ATGGC--------TGTCCTC--TT-----GGGGC....................................................................................................................................................................................................................................................................................................2411.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATGTACGACGGACCG........1811.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCGCTTGGAAGCA...........................1711.00100000000001000000
...........................................................................................................TAGTGTC----TCCGC--T----CAAT--ATGGC--------TGT......................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCGCTTGGAAGCACGATATGTA..................2511.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTACGACGGACCGAA......1711.00100000000100000000
....................................................................................................................................AT--ATGGC--------TGTCCTC--TT-----GGGG.....................................................................................................................................................................................................................................................................................................2011.00100001000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TACCTTCTACCT--AATACTACCCCCAC...........................................................2611.00100000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACAGCGCTTGGAAGCACGATATG....................2611.00100000001000000000
....................................................................................................................................................................................ATGCAACTG---------------------------CTACTG---CAACG---GC...................................................................................................................................................................................................................................2211.00100000001000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAACAGCGCTTGGAAGCACGATA......................2611.00100000000010000000
.........................................................................................................................................................................CTAGGATAC-GATGCAACTG---------------------------CTACTG---C............................................................................................................................................................................................................................................2611.00100010000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACGATATGTACGACG.............1811.00101000000000000000
...............................................................................................................................................................................TAC-GATGCAACTG---------------------------CTACTG---CAACG---G....................................................................................................................................................................................................................................2511.00100000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACGATATGTACGACGGAC..........2111.00100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACGACGGACCGAAGAG---1911.00101000000000000000
........................................................................................................................................ATGGC--------TGTCCTC--TT-----GGGGC....................................................................................................................................................................................................................................................................................................1911.00101000000000000000
.....................................................................................................................................................TGTCCTC--TT-----GGGGCTAGG................................................................................................................................................................................................................................................................................................1811.00100001000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACGATATGTACGACGGACC.........2111.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCTTGGAAGCACGATATGTACGACG.............2811.00100000010000000000
...........................................................................................................................................................................................................................................TACTCCCGCCACATACATATAGTTGA.........................................................................................................................................................................................................2611.00100000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCTAGGGCGATGTGAACAGCGCT...................................2611.00100000000001000000
................................................................................................................................................................................................................................................................GTTGAT-------------------------ACGCGCAG--------CGT-----TCGA------.............................................................................................................................................2111.00100000000001000000
..................................................................................................................................................................................................................................................................TGAT-------------------------ACGCGCAG--------CGT-----TC.....................................................................................................................................................1711.00100000000001000000
................................................................................................................................................................................................................................................................................................CGCGCAG--------CGT-----TCGA------A-----------------------------------GACATACCCAT------CT......................................................................................2811.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATGTACGACGGACCGAAGA....2211.00100000000100000000
droSec2
CA-----------------CGCCTCACGTT-------TTCCACGTGAACCCCACC----------------------CAGTTAAC--------A-----AGCATTTCTAGTGTC----TCCGC--T----CAAT--AGTGC--------TGTCCCC--TT-----GGGGCTAGGATAC-GATGCAACTG---------------------------CTACTG---CAACG---GCTACTCCCGCCACATACATATAGTTGAT-------------------------ACGCGCAG--------CGT-----TCGA------A-----------------------------------GACATACCCAT------CTACCTTCTACCT--AATACTACCCCCACCCATAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCGAAGAG---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................C--------A-----AGCATTTCTAGTGTC----TC......................................................................................................................................................................................................................................................................................................................................................1911.0010010
..............................................................................................................................................................................................................................................................TAGTTGAT-------------------------ACGCGCAG--------CGT-----TCGA------.............................................................................................................................................2311.0010001
..................................................................................................................................................................................................................................................................................................CGCAG--------CGT-----TCGA------A-----------------------------------GACATACCC................................................................................................2211.0011000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAGCGCTTGGAAGCA...........................1811.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACGATATGTACGACGGACC.........2211.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAGCGCTTGGAAGCACG.........................2011.0010100
droYak3
CGC-------------------TTCACGT--------TTCCCCGTGAACTCTACC----------------------CAGTTAAC--------A-----AGCATTTCTAGTGTC----TCCGC--T----CAAT--ATGGC--------TGTCCTC--TT-----GGGGCTAGGATAC-GATGCAACTG---------------------------CTACTG---CAACG---GCTACTCCCGCCACATACATATAGTTGAT-------------------------ACGCCCAG--------CGT-----TCGA------A-----------------------------------GAAATACCCAT------CTACCTTCTACCT--AATACTACCCCCACCTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTATGACGGACCAAAGAG---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................................................TCGA------A-----------------------------------GAAATACCCAT------CTACC...................................................................................2111.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAGCACGATATGTATGACGGACCA........2711.00101000000000
.................................................................................................................C----TCCGC--T----CAAT--ATGGC--------TGT......................................................................................................................................................................................................................................................................................................................1911.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAACAGCGCTTGGAAGCACGATAT.....................2711.00100000010000
.............................................................................................................................................................................................................................................................ATAGTTGAT-------------------------ACGCCCAG--------CGT-----TCGA------A-----------------------------------.........................................................................................................2511.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACAGCGCTTGGAAGC............................1911.00100000010000
....................................................................................................................................AT--ATGGC--------TGTCCTC--TT-----GGGGCTAGGAT..............................................................................................................................................................................................................................................................................................2711.00110000000000
........................................................................................................................................................CCTC--TT-----GGGGCTAGGATAC-G..........................................................................................................................................................................................................................................................................................2011.00101000000000
.........................................................................................................................................TGGC--------TGTCCTC--TT-----GGGGCTAGGATA.............................................................................................................................................................................................................................................................................................2511.00100100000000
.............................................................................................................................................................................................................................................................ATAGTTGAT-------------------------ACGCCCAG--------CGT-----TCGA------A-----------------------------------GA.......................................................................................................2711.00100000010000
droEre2
CA-----------------CGCTTCACGCT-------TTCCACGTGAACCCTACC----------------------CAGTTAAT--------A-----AGCATTTCTAGTGTC----TCCGC--T----CAAT--ATGGC--------ATTCCTC--TT-----GGGGCTAGGATAC-GATGCAACTG---------------------------CTACTG---CAACG---GCTACTCCCGCCACATACATATAGTTGAT-------------------------ACGCCCAG--------CGT-----TCGA------A-----------------------------------GACATACCCAT------CTACCTTCTACCT--AATACTACCCCCACCTCTAGGGCGATGTGAACAGCGCTTGGAAGCACGATATGTACGACGGACCGAAGAG---SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................TAGGATAC-GATGCAACTG---------------------------CTACTG---CAACG---GC...................................................................................................................................................................................................................................31112.001200000012
...............................................................................................................................................................................................................................................................................................ACGCCCAG--------CGT-----TCGA------A-----------------------------------GACATACCCA...............................................................................................2612.0022000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACAGCGCTTGGAAGCAC..........................2011.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CTAGGGCGATGTGAACAGCGCT...................................2211.0010000010
..........................................................................................................................................................................................................................................CTACTCCCGCCACATACATA................................................................................................................................................................................................................2011.0011000000
...........................................................................................................................................................................................................................................................ATATAGTTGAT-------------------------ACGCCCAG--------...............................................................................................................................................................1911.0010000010
..............................................................................................................................................................TT-----GGGGCTAGGATAC-GATGCA.....................................................................................................................................................................................................................................................................................2111.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCTTGGAAGCACGATATGTACGACG.............2711.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAACAGCGCTTGGAAGCACGATA......................2611.0011000000
..........................................................................................................................................................................................................................................................................................................................A------A-----------------------------------GACATACCCAT------CTACCTTC................................................................................2111.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACAGCGCTTGGAAGCAC..........................2111.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACAGCGCTTGGAAGCACGAT.......................2411.0010000100
..................................................................................................................................................................................................................................................................TGAT-------------------------ACGCCCAG--------CGT-----TCGA------A-----------------------------------GACATAC..................................................................................................2711.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................AATACTACCCCCACCTCTAGGGC..................................................2311.0010100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GCGATGTGAACAGCGCTTGGA...............................2111.0010000010
..............................................AACCCTACC----------------------CAGTTAAT--------A-----AGCAT......................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAAGCACGATATGTACG................2011.0010000010
............................................................................................................................................................................................................................................................TATAGTTGAT-------------------------ACGCCCAG--------CGT-----TCGC------.............................................................................................................................................2511.0011000000

Generated: 05/17/2015 at 11:29 PM