ID:

dps_876

 Coordinate:

2:29703604-29703754 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.5 -26.4 -26.4

Flybase annnotation

CDS [Dpse\GA16102-cds]; exon [dpse_GLEANR_6484:1]; intron [Dpse\GA16102-in]

No Repeatable elements found

mature
  1. Unknown_group_39:100316-100339 +
  2. Unknown_group_635:8600-8623 -
  3. Unknown_group_88:4775-4798 -
  4. Unknown_group_368:5243-5266 -
  5. Unknown_singleton_1180:229-252 -
  6. Unknown_group_516:710-733 -
  7. Unknown_group_122:10075-10098 -
  8. Unknown_group_210:14209-14232 +
  9. dps_876  2:29703715-29703738 +
  10. Unknown_singleton_310:174-197 +
  11. Unknown_group_601:2687-2710 -
  12. Unknown_singleton_3081:622-645 -
  13. Unknown_singleton_2507:357-380 -
  14. Unknown_singleton_1881:459-482 +
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TCTGAGTCGCCTCTACGGCCACATGGCCAATCCGGTGCAGAAGCGTAGCGGTGAGTATCCATCACCCAGTATCCCAGAGCCTCTACCCTTCTAATCGAACAGTAATGCCATTAAACAGTAATTTCGTTGGGGGCTAGCTCATTAATATGTGCAAAGGAGGCTGTTGAGACAACGAGCTTTTTCGCTGACTATGATTGTTCAATAATTTCACAAATTATTAATTTCCGAAAACGTTATAAATTTTATTATAG
**************************************************((((.......))))......((.((((((((((.(((..((((.((((......((........)).....)))))))))))...((.(((....))).))...))))))).))).))((.((((....)))).))..............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 SRR902011
testis
 SRR902010
ovaries
 GSM343916
embryo
 M062
head
 V112
male body		 GSM444067
head
 SRR902012
CNS imaginal disc
..................................................................................................................................................................................................TTGTTCAATAATTTCACAAATTAT................................. 24 0 7 36.86 258 202 51 4 0 1 0 0 0 0
..................................................................................................................................................................................................TTGTTCAATAATTTCACAAATTATT................................ 25 0 7 3.43 24 24 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTGTTCAATAATTTCACAAATTA.................................. 23 0 8 2.88 23 18 4 0 0 0 1 0 0 0
.............................................................................................................................................................................................................................TTTCCGAAAACGTTATAAATTTTATTA... 27 0 7 2.86 20 17 3 0 0 0 0 0 0 0
...................................................................................................................................................................................................TGTTCAATAATTTCACAAATTAT................................. 23 0 7 2.14 15 15 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTGTTCAATAATTTCACAAATTATTAA.............................. 27 0 7 1.86 13 13 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTTCCGAAAACGTTATAAATTTTAT..... 25 0 7 1.71 12 12 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TCGCTGACTATGATTGTTCAATAAT............................................. 25 0 12 1.17 14 14 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TCGCTGACTATGATTGTTCAATAATT............................................ 26 0 12 1.17 14 12 1 0 0 1 0 0 0 0
.................................................................................................................................................................TGTTGAGACAACGAGCTTTTTCGC.................................................................. 24 0 14 1.07 15 5 0 4 6 0 0 0 0 0
..................................................................................................................................................................................................TGGTTCAATAATTTCACAAATTAT................................. 24 1 7 1.00 7 0 7 0 0 0 0 0 0 0
....................................................................................................................................................................TGAGACAACGAGCTTTTTCGCTGAC.............................................................. 25 0 14 0.93 13 11 2 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTTCCGAAAACGTTATAAATTTT....... 23 0 7 0.86 6 3 2 0 0 0 0 0 1 0
..........................................................................................................................................................................................................................TAATTTCCGAAAACGTTATAAATTT........ 25 0 7 0.57 4 1 1 0 2 0 0 0 0 0
...............................................................................................................................................................................................................................TCCGAAAACGTTATAAATTTTATTA... 25 0 7 0.57 4 1 3 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTGTTCAATAATTTCACAAATTAC................................. 24 1 8 0.50 4 0 4 0 0 0 0 0 0 0
....................................................................................................................................................................TGAGACAACGAGCTTTTTCGCTGACTA............................................................ 27 0 12 0.50 6 6 0 0 0 0 0 0 0 0
...........................................................................................................................................................AGAAGGTGTTGAGACAACGAGC.......................................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................TGAGACAACGAGCTTTTTCGCTGACT............................................................. 26 0 13 0.46 6 6 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CTTGTTCAATAATTTCACAAATTAT................................. 25 1 7 0.43 3 1 2 0 0 0 0 0 0 0
...................................................................................................................................................................................................TGTTCAATAATTTCACAAATTATT................................ 24 0 7 0.43 3 3 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTGTTCAATAATTTCACAAATTATTA............................... 26 0 7 0.43 3 3 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTTCCGAAAACGTTATAAATTTTATT.... 26 0 7 0.43 3 3 0 0 0 0 0 0 0 0
....................................................................................................................................................................TGAGACAACGAGCTTTTTCGCT................................................................. 22 0 15 0.33 5 4 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................TCGCTGACTATGATTGTTCAATA............................................... 23 0 13 0.31 4 4 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TTCCGAAAACGTTATAAATTTTAT..... 24 0 7 0.29 2 2 0 0 0 0 0 0 0 0
....................................................................................................................................................................TGAGACAACGAGCTTTTTCGCTGA............................................................... 24 0 14 0.29 4 4 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGTCCGAAAACGTTATAAATTTTATTA... 27 1 7 0.29 2 0 2 0 0 0 0 0 0 0
................................................................................................................................................................................................GATTGTTCAATAATTTCACAAATTAT................................. 26 0 7 0.29 2 1 1 0 0 0 0 0 0 0
.....................CGGGGCCAATCCGGTGCA.................................................................................................................................................................................................................... 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TGTTCAATAATTTCACAAATTA.................................. 22 0 8 0.25 2 2 0 0 0 0 0 0 0 0
.................................................................................................................................................................TGTTGAGACAACGAGCTTTTTC.................................................................... 22 0 14 0.21 3 1 0 2 0 0 0 0 0 0
.....................................................................................................................................................................................TCGCTGACTATGATTGTTCAATAATTT........................................... 27 0 12 0.17 2 2 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TCGCTGACTATGATTGTTCA.................................................. 20 0 13 0.15 2 2 0 0 0 0 0 0 0 0
......................................................................................................................................................................................CGCTGACTATGATTGTTCAATAATT............................................ 25 0 13 0.15 2 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTTTCGAAAACGTTATAAATTTT....... 23 1 7 0.14 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................TTTCAATAATTTCACAAATTAT................................. 22 1 7 0.14 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TCCGAAAACGTTATAAATTTTAT..... 23 0 7 0.14 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CTTTCCGAAAACGTTATAAATTTT....... 24 1 7 0.14 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................ATTTCCGAAAACGTTATAAATTTTAT..... 26 0 7 0.14 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TGTCCGAAAACGTTATAAATTTT....... 23 1 7 0.14 1 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................TGAGACAACGAGCTTTTTCGCTGAA.............................................................. 25 1 14 0.14 2 2 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................AAAACGTTATAAATTTTATTA... 21 0 7 0.14 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TAATTTCCGAAAACGTTATAAATT......... 24 0 7 0.14 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TAATTTCACAAATTATTAATTTCCGA....................... 26 0 7 0.14 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TGTTCAATAATTTCACAAATTATA................................ 24 1 7 0.14 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................ATTTCCGAAAACGTTATAAATTTT....... 24 0 7 0.14 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTGTTCAATAATTTCACAAATTATAAA.............................. 27 1 7 0.14 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTTCCGAAAACGTTATAAATTTTATA.... 26 1 7 0.14 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................TCTGTTGAGACAACGAGCTTTTTCGC.................................................................. 26 1 7 0.14 1 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................TTTTCGAAAACGTTATAAATTTTATTA... 27 1 7 0.14 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTGCTCAATAATTTCACAAATTAT................................. 24 1 7 0.14 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TAATTGTTCAATAATTTCACAAATTAT................................. 27 1 7 0.14 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTTTCGAAAATGTTATAAATTTT....... 23 2 7 0.14 1 0 0 0 0 0 1 0 0 0
................................................................................................................................................................................................GGTTGTTCAATAATTTCACAAATTAT................................. 26 1 7 0.14 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTGGTCAATAATTTCACAAATTAT................................. 24 1 7 0.14 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTGTTCAATAATTTAACAAATTAT................................. 24 1 7 0.14 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTGTTCAATAATTTCACAAATTATTAAA............................. 28 1 7 0.14 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTTCCGAAAACGTTATAAATTTTATAA... 27 1 7 0.14 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TCAATAATTTCACAAATTAT................................. 20 0 7 0.14 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTGTTCAATAATTTCACAAATTATTAATT............................ 29 0 7 0.14 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................CAATAATTTCACAAATTAT................................. 19 0 7 0.14 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TTCCGAAAACGTTATAAATTTTATTA... 26 0 7 0.14 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TGTTCAATAATTTCACAAATTATTAA.............................. 26 0 7 0.14 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TGACAAATTATTAATTTCCGAAAACGC................. 27 2 7 0.14 1 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................CTTGTTCAATAATTTCACAAATTATT................................ 26 1 7 0.14 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................GTGTTCAATAATTTCACAAATTAT................................. 24 1 7 0.14 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTTCCGAAAATGTTATAAATTTTATT.... 26 1 7 0.14 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTGATCAATAATTTCACAAATTAT................................. 24 1 7 0.14 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTTCCGAAAACGTTATAAATTTTA...... 24 0 7 0.14 1 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................TTCCGAAAACGTTATAAATTTTA...... 23 0 7 0.14 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................TGTTGAGACAACGAGCTTTTTCC................................................................... 23 1 15 0.13 2 0 0 2 0 0 0 0 0 0
..................................................................................................................................................................................................TTGTTCAATAATTTCACAAATT................................... 22 0 8 0.13 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................TGTTGAGACAACGAGCTTTTT..................................................................... 21 0 16 0.13 2 2 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TGACTATGATTGTTCAATAATTTCACAAA..................................... 29 0 8 0.13 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................TATGATTGTTCAATAATTTCACAA...................................... 24 0 8 0.13 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................TGACTATGATTGTTCAATAATTTCACAA...................................... 28 0 8 0.13 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGGTTCAATAATTTCACAAATTA.................................. 23 1 8 0.13 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................TTCTTCAATAATTTCACAAATTA.................................. 23 1 8 0.13 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................TGATTGTTCAATAATTTCACAAAA.................................... 24 1 9 0.11 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TGATTGTTCAATAATTTCACAAAT.................................... 24 0 9 0.11 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CAACGAGCTTTTTCGCTGACTATG.......................................................... 24 0 11 0.09 1 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................TTTCGCTGACTATGATTGTTCAATAATT............................................ 28 0 12 0.08 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TTTTCGCTGACTATGATTGTTCAATAAT............................................. 28 0 12 0.08 1 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................TTTCGCTGACTATGATTGTTCAATAA.............................................. 26 0 12 0.08 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................TTCGCTGACTATGATTGTTCAATAAT............................................. 26 0 12 0.08 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TTTTCGCTGACTATGATTGTTCA.................................................. 23 0 13 0.08 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TTTTTCGCTGACTATGATTGTTCA.................................................. 24 0 13 0.08 1 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................TTTCGCTGACTATGATTGTTCAATA............................................... 25 0 13 0.08 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................CGCTGACTATGATTGTTCAATAAT............................................. 24 0 13 0.08 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TCGCTGACTATGATTGTTCAAT................................................ 22 0 13 0.08 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TTTTTCGCTGACTATGATTGTTCAA................................................. 25 0 13 0.08 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................CGCTGACTATGATTGTTCAATAATTT........................................... 26 0 13 0.08 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................ATTTTCGCTGACTATGATTGTTCA.................................................. 24 1 13 0.08 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TTTTCGCTGACTATGATTGTTCAA................................................. 24 0 13 0.08 1 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................TGTTGAGACAACGAGCTTTTTCGCTGAC.............................................................. 28 0 14 0.07 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................TGAGACAACGAGCTTTTTCGCTGACC............................................................. 26 1 14 0.07 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TCGCTGACTATGATTGTT.................................................... 18 0 14 0.07 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................TGTTGAGACAACGAGCTTTTTCAA.................................................................. 24 2 14 0.07 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................CTGACTATGATTGTTCAATAAT............................................. 22 0 14 0.07 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................TGTTGAGACAACGAGCTTTTTCG................................................................... 23 0 14 0.07 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................TGATACAACGAGCTTTTTCGCTGAC.............................................................. 25 1 14 0.07 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................CGCTGACTATGATTGTTCAATA............................................... 22 0 14 0.07 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TGACTATGATTGTTCAATAATTT........................................... 23 0 14 0.07 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................GAGACAACGAGCTTTTTCGCTGAC.............................................................. 24 0 14 0.07 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................TGTGGAGACAACGAGCTTTTTCGT.................................................................. 24 2 14 0.07 1 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................TGAGACAACGAGCTTTTTCG................................................................... 20 0 15 0.07 1 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................TATGATTGTTCAATAATTTCAC........................................ 22 0 15 0.07 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................TGCTGAGACAACGAGCTTTTTCGC.................................................................. 24 1 15 0.07 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................TGAGACAACGAGCTTTTTCGC.................................................................. 21 0 15 0.07 1 0 0 0 0 0 0 0 0 1
....................................................................................................................................................................TGAGACAACGAGCTTTTTCGCTG................................................................ 23 0 15 0.07 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................GACAACGAGCTTTTTCGCTGAC.............................................................. 22 0 16 0.06 1 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................TGTTGAGACATCGACCTTTTTCG................................................................... 23 2 18 0.06 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

AGACTCAGCGGAGATGCCGGTGTACCGGTTAGGCCACGTCTTCGCATCGCCACTCATAGGTAGTGGGTCATAGGGTCTCGGAGATGGGAAGATTAGCTTGTCATTACGGTAATTTGTCATTAAAGCAACCCCCGATCGAGTAATTATACACGTTTCCTCCGACAACTCTGTTGCTCGAAAAAGCGACTGATACTAACAAGTTATTAAAGTGTTTAATAATTAAAGGCTTTTGCAATATTTAAAATAATATC
**************************************************((((.......))))......((.((((((((((.(((..((((.((((......((........)).....)))))))))))...((.(((....))).))...))))))).))).))((.((((....)))).))..............************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011
testis
 M040
female body
 SRR902010
ovaries
 M059
embryo
 V112
male body		 SRR902012
CNS imaginal disc
 M062
head
 GSM343916
embryo
....................................................................................................................................................................................................................TTAATAATTAAAGGCTTTTGCAATATT............ 27 0 7 17.00 119 110 3 6 0 0 0 0 0
......................................................................................................................................................................................................................AATAATTAAAGGCTTTTGCAATATT............ 25 0 7 8.43 59 51 0 8 0 0 0 0 0
.......................................................................................................................................................................................................................ATAATTAAAGGCTTTTGCAATATT............ 24 0 7 5.86 41 25 0 16 0 0 0 0 0
............................................................................................................................................................................................GATACTAACAAGTTATTAAAGTGT....................................... 24 0 8 4.75 38 29 0 9 0 0 0 0 0
.....................................................................................................................................................................................................................TAATAATTAAAGGCTTTTGCAATATT............ 26 0 7 3.71 26 25 0 1 0 0 0 0 0
...................................................................................................................................................................................AAAGCGACTGATACTAACAAGTTAT............................................... 25 0 13 3.15 41 14 23 4 0 0 0 0 0
.....................................................................................................................................................................................AGCGACTGATACTAACAAGTTAT............................................... 23 0 13 2.92 38 5 31 2 0 0 0 0 0
..................................................................................................................................................................................AAAAGCGACTGATACTAACAAGTTAT............................................... 26 0 13 1.92 25 9 9 5 2 0 0 0 0
...............................................................................................................................................................................CGAAAAAGCGACTGATACTAACAA.................................................... 24 0 12 1.58 19 1 9 0 6 1 0 2 0
....................................................................................................................................................................................AAGCGACTGATACTAACAAGTTAT............................................... 24 0 13 1.46 19 5 14 0 0 0 0 0 0
...............................................................................................................................................................................CGAAAAAGCGACTGATACTAACAAGT.................................................. 26 0 12 1.42 17 6 9 0 2 0 0 0 0
...............................................................................................................................................................................................................AGTGTTTAATAATTAAAGGCTTTT.................... 24 0 7 1.29 9 0 9 0 0 0 0 0 0
......................................................................................................................................................................................GCGACTGATACTAACAAGTTAT............................................... 22 0 14 1.21 17 5 10 0 0 1 0 1 0
..............................................................................................................................................................................................................AAGTGTTTAATAATTAAAGGCTTTT.................... 25 0 7 1.14 8 0 8 0 0 0 0 0 0
...................................................................................................................................................ACACGTTTCCTCCGACAACTCT.................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TAAATAATTAAAGGCTTTTGCAATATT............ 27 1 7 1.00 7 4 0 3 0 0 0 0 0
................................................................................................................................................TATACACGTTTCCTCCGACAACTCT.................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TTAATGATTAAAGGCTTTTGCAATATT............ 27 1 7 1.00 7 7 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTAATAATTAAAGGCTTTTGCAATATTT........... 28 0 7 0.86 6 6 0 0 0 0 0 0 0
.......................................................................................................................................................................................CGACTGATACTAACAAGTTAT............................................... 21 0 15 0.80 12 2 8 0 1 0 0 0 1
...............................................................................................................................................................................................................AGTGTTTAATAATTAAAGGCTTTTGC.................. 26 0 7 0.71 5 2 1 2 0 0 0 0 0
............................................................................................................................................................................................................................TAAAGGCTTTTGCAATATTTAAAAT...... 25 0 7 0.57 4 1 1 2 0 0 0 0 0
........................................................................................................................................................................................GACTGATACTAACAAGTTATTAAAGT......................................... 26 0 14 0.57 8 8 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AAAAAAATTAAAGGCTTTTGCAATATT............ 27 3 7 0.57 4 1 0 3 0 0 0 0 0
................................................................................................................................................................................................................GTGTTTAATAATTAAAGGCTTTT.................... 23 0 7 0.57 4 0 4 0 0 0 0 0 0
................................................................................................................................................................................................................GTGTTTAATAATTAAAGGCTTTTGC.................. 25 0 7 0.57 4 4 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TAATTAAAGGCTTTTGCAATATT............ 23 0 7 0.57 4 1 0 3 0 0 0 0 0
.............................................................................................................................................................................................................AAAGTGTTTAATAATTAAAGGCTTTT.................... 26 0 7 0.57 4 2 2 0 0 0 0 0 0
.........................................................................................................................................................................................ACTGATACTAACAAGTTATTAAAGTGT....................................... 27 0 8 0.50 4 4 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAGCGACTGATACTAACAAGTTAT............................................... 27 0 13 0.46 6 1 3 2 0 0 0 0 0
.......................................................................................................................................................................................................................ATGATTAAAGGCTTTTGCAATATT............ 24 1 7 0.43 3 3 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TGAATAATTAAAGGCTTTTGCAATATT............ 27 1 7 0.43 3 3 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTAATAATTAAAGGCTTTTGCAATAT............. 26 0 7 0.43 3 2 0 1 0 0 0 0 0
......................................................................................................................................................................................................................AAAAATTAAAGGCTTTTGCAATATT............ 25 1 7 0.43 3 3 0 0 0 0 0 0 0
.......................................................................................................................................................................CTGTTGCTCGAAAAAGCGACTGAT............................................................ 24 0 14 0.43 6 1 4 1 0 0 0 0 0
.........................................................................................................................................................................................................................AATTAAAGGCTTTTGCAATATT............ 22 0 7 0.43 3 2 0 1 0 0 0 0 0
..................................................................................................................................................................................................................GTTTAATAATTAAAGGCTTTTGCAAT............... 26 0 7 0.43 3 3 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TTATGATTAAAGGCTTTTGCAATA.............. 24 2 7 0.43 3 3 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TTAAAGGCTTTTGCAATATT............ 20 0 7 0.43 3 3 0 0 0 0 0 0 0
............................................................................................................................................................................GCTCGAAAAAGCGACTGATACTAACAA.................................................... 27 0 12 0.42 5 0 5 0 0 0 0 0 0
.........................................................................................................................................................................GTTGCTCGAAAAAGCGACTGAT............................................................ 22 0 14 0.36 5 0 3 0 0 2 0 0 0
.....................................................................................................................................................................................AGCGGCTGATACTAACAAGTCATT.............................................. 24 2 12 0.33 4 4 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................AAAAAGGCTTTTGCAATATTTAAAAT...... 26 2 9 0.33 3 3 0 0 0 0 0 0 0
.................................................................................................................................................................................AAAAAGCGACTGATACTAACAAGT.................................................. 24 0 13 0.31 4 0 4 0 0 0 0 0 0
.........................................................................................................................................................................................................................AATTAAAGGCTTTTGCAATATTTAAAAT...... 28 0 7 0.29 2 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTAATAATTTAAGGCTTTTGCAATATT............ 27 1 7 0.29 2 2 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GTTTAATAATTAAAGGCTTTTGC.................. 23 0 7 0.29 2 2 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................ATAATTAAAGGCTTTTGCAATATTT........... 25 0 7 0.29 2 2 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TAATTAAAGGCTTTTGCAATATTT........... 24 0 7 0.29 2 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTAATAATTAAAGGCTTTTGCAAT............... 24 0 7 0.29 2 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AAAATAATTAAAGGCTTTTGCAATATT............ 27 2 7 0.29 2 2 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................ATAATTAAAGGCTTTTGCAATAT............. 23 0 7 0.29 2 2 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AAGTGTTTAATAATTAAAGGCTTTTGC.................. 27 0 7 0.29 2 2 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GAAAAATTAAAGGCTTTTGCAATATT............ 26 2 7 0.29 2 0 0 2 0 0 0 0 0
.........................................................................................................................................................................GTTGCTCGAAAAAGCGACTGATACT......................................................... 25 0 11 0.27 3 0 3 0 0 0 0 0 0
...............................................................................................................................................................................CGAAAAAGCGACTGATACTAACAAGTT................................................. 27 0 12 0.25 3 2 1 0 0 0 0 0 0
................................................................................................................................................................................GAAAAAGCGACTGATACTAACAA.................................................... 23 0 12 0.25 3 0 2 0 0 1 0 0 0
............................................................................................................................................................................................GATACTAACAAGTTATTAAAGTGTTT..................................... 26 0 8 0.25 2 2 0 0 0 0 0 0 0
..................................................................................................................................................................................AAAAGCGACTGATACTAACAAGTTA................................................ 25 0 13 0.23 3 0 3 0 0 0 0 0 0
...................................................................................................................................................................................TAAGCGACTGATACTAACAAGTTAT............................................... 25 1 13 0.23 3 2 1 0 0 0 0 0 0
.......................................................................................................................................................................................CGACTGATACTAACAAGTTATTAAAGT......................................... 27 0 14 0.21 3 0 0 3 0 0 0 0 0
......................................................................................................................................................................TCTGTTGCTCGAAAAAGCGACTGAT............................................................ 25 0 14 0.21 3 0 3 0 0 0 0 0 0
..........................................................................................................................................................................................CTGATACTAACAAGTTATTAAAGTG........................................ 25 0 14 0.21 3 0 0 3 0 0 0 0 0
...............................................................................................................................................................CCACAACTCTGTTGCTCGAAAAAGCGACT............................................................... 29 1 5 0.20 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................GTTGCTCGAAAAAGCGACTGATACTA........................................................ 26 0 11 0.18 2 0 2 0 0 0 0 0 0
................................................................................................................................................................................GAAAAAGCGACTGATACTAACAAGT.................................................. 25 0 12 0.17 2 0 1 0 0 1 0 0 0
...............................................................................................................................................................................CGAAAAAGCGACTGATACTAACAAGTTAT............................................... 29 0 12 0.17 2 1 0 0 1 0 0 0 0
...............................................................................................................................................................................CGAAAAAGCGACTGATACTAACAATT.................................................. 26 1 13 0.15 2 0 0 0 2 0 0 0 0
....................................................................................................................................................................................AAGCGGCTGATACTAACAAGTTAT............................................... 24 1 13 0.15 2 0 0 2 0 0 0 0 0
.................................................................................................................................................................................AAAAAGCGACTGATACTAACAAGTTA................................................ 26 0 13 0.15 2 0 1 1 0 0 0 0 0
.....................................................................................................................................................................................AGCGACTGATACTAACAAGTTA................................................ 22 0 13 0.15 2 0 2 0 0 0 0 0 0
.................................................................................................................................................................................................................TGTTTAATAATTAAAGGCTTTTGC.................. 24 0 7 0.14 1 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................AAATAAAGGCTTTTGCAATATT............ 22 1 7 0.14 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AAATAATTAAAGGCTTTTGCAATATT............ 26 1 7 0.14 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GTTTAATAATTAAAGGCTTTTACAAT............... 26 1 7 0.14 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TAATAATTAAAGGCATTTGCAATATT............ 26 1 7 0.14 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TAATAATTAAAGGCTTTTGCAATATTT........... 27 0 7 0.14 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................GTGTTAAATAATTAAAGGCTTTT.................... 23 1 7 0.14 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................AATAATTAAAGGCTTTTGCAATATTT........... 26 0 7 0.14 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................ATAATAATTAAAGGCTTTTGCAATATT............ 27 1 7 0.14 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AGTGTTTAATAATTAAAGGC........................ 20 0 7 0.14 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GGCTTTTGCAATATTTAAA........ 19 0 7 0.14 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GAAAAATTAGAGGCTTTTGCAATATT............ 26 3 7 0.14 1 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................AAGGCTTTTGCAATATT............ 17 0 7 0.14 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GAATAATTAAAGGCTTTTGCAATATT............ 26 1 7 0.14 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................GTGTTAAATAATTAAAGGCTTTTGC.................. 25 1 7 0.14 1 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................TTAATAAGTAAAGGCTTTTGCAATATT............ 27 1 7 0.14 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AAAAGGCTTTTGCAATATTTAAAATAAT... 28 1 7 0.14 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TAAAGGCTTTTGCAATATT............ 19 0 7 0.14 1 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................AAGTGTTTAATAATTAAGGGCTTTTG................... 26 1 7 0.14 1 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................AAATTAAAGGCTTTTGCAATAT............. 22 1 7 0.14 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................ATTAATAATTAAAGGCTTTTGCAATATT............ 28 1 7 0.14 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................AAAAAAAAAGGCTTTTGCAATATT............ 24 3 7 0.14 1 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................AAAGTGTTTAATAATTAAAGGCTTT..................... 25 0 7 0.14 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................AGTGTTTAATAATTAAAGGCT....................... 21 0 7 0.14 1 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................................AAAGGCTTTTGCAATATTTAAAATAAT... 27 0 7 0.14 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................TAAAGGCTTTTGCAATATTTAAAATAA.... 27 0 7 0.14 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................TAATAATTAAAGGCTTTTG................... 19 0 7 0.14 1 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................................AAAAATAATTAAAGGCTTTTGCAATATT............ 28 3 7 0.14 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTAATAATTAAAGGCTTTTGCAATATTA........... 28 1 7 0.14 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................AATTAATGATTAAAGGCTTTTGCAATATT............ 29 3 7 0.14 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GTTTAATAATTAAAGGCTTTTGCAATATT............ 29 0 7 0.14 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AGTGTTTCATAATTAAAGGCTTTT.................... 24 1 7 0.14 1 0 0 0 0 0 0 0 1
...............................................................................................................................................................................................................AGTGTTTAATAATTAAAGGCTTTTG................... 25 0 7 0.14 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................AAAAAATTAAAGGCTTTTGCAATATT............ 26 2 7 0.14 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GAAAAATTAAAGGCCTTTGCAATATT............ 26 3 7 0.14 1 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................AAGTCTTTAATAATTAAAGGCTTTT.................... 25 1 7 0.14 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................AGTGTTTAATAATTAAAGGCTTT..................... 23 0 7 0.14 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................GTGTTTAATAATTAAAGGCT....................... 20 0 7 0.14 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AAGTGTTTAATAATTAAAGGCTTT..................... 24 0 7 0.14 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................AAGGCTTTTGCAATATTTAAAA....... 22 0 7 0.14 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................CTGATACTAACAAGTTATTAAAGTGT....................................... 26 0 8 0.13 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................GACTGATACTAACAAGTTATTAAAGTGT....................................... 28 0 8 0.13 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................ACTAACAAGTTATTAAAGTGTTTAAT.................................. 26 0 8 0.13 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................TGCTCGAAAAAGCGACTGATACTAACAA.................................................... 28 0 11 0.09 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................GAAAAAGCGACTGATACTAACAAG................................................... 24 0 12 0.08 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................GAAAAAGCGACTGATACTAACAAGTTAT............................................... 28 0 12 0.08 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................CGAATAAGCGACTGATACTAACAA.................................................... 24 1 12 0.08 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................GAAAAAGCGACTGATACTAACAAGTTA................................................ 27 0 12 0.08 1 0 0 0 0 1 0 0 0
..................................................................................................................................................................................AAAAGCGACTGATACTAACAAGTTATT.............................................. 27 0 12 0.08 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................CTCGAAAAAGCGACTGATACTAACAAGT.................................................. 28 0 12 0.08 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................AGAGCGACTGATACTAACAAGTTAT............................................... 25 1 13 0.08 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................CGAAAAAGCGACTGATGC.......................................................... 18 1 13 0.08 1 0 0 0 1 0 0 0 0
...................................................................................................................................................................................AAAGCGACTGGTACTAACAAGTTAT............................................... 25 1 13 0.08 1 0 0 1 0 0 0 0 0
.................................................................................................................................................................................AAAAAGCGACTGATACTAACAAGCTAT............................................... 27 1 13 0.08 1 0 0 0 1 0 0 0 0
....................................................................................................................................................................................AAGCGACTGATACTAACAAGTTA................................................ 23 0 13 0.08 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................AGCGGCTGATACTAACAAGTTAT............................................... 23 1 13 0.08 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................CGAAAAAGCGGCTGATACTAA....................................................... 21 1 13 0.08 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................AAAAGCGACTGATACTAACAAGT.................................................. 23 0 13 0.08 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................GAAAAAGCGACTGATACTAACAATT.................................................. 25 1 13 0.08 1 0 0 0 1 0 0 0 0
.......................................................................................................................................................................CTGTTGCTCGAAAAAGAGACTGAT............................................................ 24 1 14 0.07 1 0 0 0 1 0 0 0 0
.................................................................................................................................................................ACAACTCTGTTGCTCGAAAAAGCGACT............................................................... 27 0 14 0.07 1 0 0 0 1 0 0 0 0
......................................................................................................................................................................................GCGACTGATACTAACAAGTTA................................................ 21 0 14 0.07 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................ACAACTCTGTTGCTCGAAAAAGCGAC................................................................ 26 0 14 0.07 1 0 1 0 0 0 0 0 0
........................................................................................................................................................................................GGCTGATACTAACAAGTTATT.............................................. 21 1 14 0.07 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................ACAACTCTGTTGCTCGAAAAAGCGAGT............................................................... 27 1 14 0.07 1 0 0 0 1 0 0 0 0
........................................................................................................................................................................TGTTGCTCGAAAAAGCGACTGA............................................................. 22 0 15 0.07 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................CGACTGATACTAACAAGT.................................................. 18 0 15 0.07 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................TCTGTTGCTCGAAAAAGCGACTGA............................................................. 24 0 15 0.07 1 0 1 0 0 0 0 0 0
........................................................................................................................................................................................GACTGATACTAACAAGTTAT............................................... 20 0 15 0.07 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................CTGTTGCTCGAAAAAGCGACTGA............................................................. 23 0 15 0.07 1 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:29703554-29703804 + dps_876 TCTGAGTCGCCTCTACGGCCACATGGCCAATCCGGT-GCAGAAGCGTAGCGGTGAGTATCCATCACCCAGTATCCCAGAGCCTCTACCCTTCTAATCGAACAGTAATGCCATTAAACAGTAATTTCGTTGGGGGCTAGCTCATTAATATGTGCAAAGGAGGCTGTTGAGACAACGAGCTTTTTCGCTGACTATGATTGTTCAATAATTTCACAAATTATTAATTTCCGAAAACGTTATAAATTTTATTATAG
droPer2 scaffold_6:5077130-5077290 + TCTGAGTCGCCTCTACGGCCACATGGCCAATCCGGT-GCAGAAGCGTAGCGGTGAGTATCCATCACCCAGTATCCCAGAGCCTCTACCCTTCTAATCGAACAGTAATGCCATTAAACAGTAATTTGGTTGGGGGCTAGCTCATTAATATGTGCAAAGGAGGC------------------------------------------------------------------------------------------
droWil2 scf2_1100000004943:4040384-4040434 + TTTGAGTCGCTTGTATGGACACATGGTGGA-------AAAGAGAAGTGGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13047:16374042-16374103 - TTTGAGTCGTTTGTACGGGCATATGGCAAACCCGAT-ACAGAAACGAAGCGGTAAGTGCACAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:12694424-12694478 - CTTGAGTCGCCTCTACGGGCACATGGCCAACCCCAT-ACAGAAGCGTAGCGGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15116:1268817-1268876 - TTTGAGCCGCTTGTACGGACACATGGCAAATCCGAT-ACAAAAACGTAGCGGTAAGTATTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13340:15140690-15140746 - TTTGAGCCGCTTGTACGGCCACATGGCCAATCCCAT-CCAGAAGCGGGGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000395971:43470-43526 + TTTGAGCCGCTTGTACGGACACATGGCCAATCCCAT-CCAGAAGAGGAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302707:489248-489304 + TTTAAGCCGTCTCTACGGGCACATGGCCAATCCCAT-CGTGAAGCGGAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454126:233644-233700 + TTTGAGCCGTTTGTATGGACACATGGCCAATCCCAT-CGTCAAGCGGAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490994:1039564-1039620 + TTTGAGCCGTTTGTACGGACACATGGCCAATCCCAT-TGTGAAGCGTAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000771335:1499-1555 - TTTGAGCCGTTTGTACGGACACATGGCCAATCCCAT-CGTGAAGCGCAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302402:1013472-1013528 + TTTGAGCCGTCTGTATGGACACATGGCCAATCCCAT-CGTGAAGCGGAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415710:601930-601986 - TTTGAGCCGTTTGTACGGACACATGGCCAATCCCAT-CGTGAAGCGGAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409804:1521652-1521708 + TTTGAGCCGCCTGTACGGACACATGGCCAATCCCAT-TGTGAAGCGGAATGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3R:15242061-15242117 + TTTGAGTCGTTTGTACGGGCACATGGCCAATCCCAT-CGTGAAGCGGAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3r:6016005-6016061 - TTTGAGTCGTTTGTACGGGCACATGGCCAATCCCAT-CGTGAAGCGGAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_25:525252-525308 - TTTGAGTCGTTTGTACGGGCACATGGCCAATCCCAT-CGTGAAGCGGAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chr3R_random_344:1449-1506 + TTTGAGCCGTTTGTACGGGCACATGGCCAACCCCATTCGTGAAGCGGAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4770:6388474-6388530 - TTTGAGCCGTTTGTACGGCCACATGGCCAATCCCAT-CGTGAAGCGGAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TCTGAGTCGCCTCTACGGCCACATGGCCAATCCGGT-GCAGAAGCGTAGCGGTGAGTATCCATCACCCAGTATCCCAGAGCCTCTACCCTTCTAATCGAACAGTAATGCCATTAAACAGTAATTTCGTTGGGGGCTAGCTCATTAATATGTGCAAAGGAGGCTGTTGAGACAACGAGCTTTTTCGCTGACTATGATTGTTCAATAATTTCACAAATTATTAATTTCCGAAAACGTTATAAATTTTATTATAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................TTGTTCAATAATTTCACAAATTAT.................................24736.862580202510100040
...................................................................................................................................................................................................TTGTTCAATAATTTCACAAATTATT................................2573.432402400000000
...................................................................................................................................................................................................TTGTTCAATAATTTCACAAATTA..................................2382.882301841000000
..............................................................................................................................................................................................................................TTTCCGAAAACGTTATAAATTTTATTA...2772.862001730000000
....................................................................................................................................................................................................TGTTCAATAATTTCACAAATTAT.................................2372.141501500000000
...................................................................................................................................................................................................TTGTTCAATAATTTCACAAATTATTAA..............................2771.861301300000000
..............................................................................................................................................................................................................................TTTCCGAAAACGTTATAAATTTTAT.....2571.711201200000000
......................................................................................................................................................................................TCGCTGACTATGATTGTTCAATAAT.............................................25121.171401400000000
......................................................................................................................................................................................TCGCTGACTATGATTGTTCAATAATT............................................26121.171401210100000
..................................................................................................................................................................TGTTGAGACAACGAGCTTTTTCGC..................................................................24141.07150500000640
.....................................................................................................................................................................TGAGACAACGAGCTTTTTCGCTGAC..............................................................25140.931301120000000
..............................................................................................................................................................................................................................TTTCCGAAAACGTTATAAATTTT.......2370.8660320010000
...........................................................................................................................................................................................................................TAATTTCCGAAAACGTTATAAATTT........2570.5740110000200
................................................................................................................................................................................................................................TCCGAAAACGTTATAAATTTTATTA...2570.5740130000000
...................................................................................................................................................................................................TTGTTCAATAATTTCACAAATTAC.................................2480.5040040000000
.....................................................................................................................................................................TGAGACAACGAGCTTTTTCGCTGACTA............................................................27120.5060600000000
.....................................................................................................................................................................TGAGACAACGAGCTTTTTCGCTGACT.............................................................26130.4660600000000
....................................................................................................................................................................................................TGTTCAATAATTTCACAAATTATT................................2470.4330300000000
...................................................................................................................................................................................................TTGTTCAATAATTTCACAAATTATTA...............................2670.4330300000000
..............................................................................................................................................................................................................................TTTCCGAAAACGTTATAAATTTTATT....2670.4330300000000
.....................................................................................................................................................................TGAGACAACGAGCTTTTTCGCT.................................................................22150.3350400100000
......................................................................................................................................................................................TCGCTGACTATGATTGTTCAATA...............................................23130.3140400000000
...............................................................................................................................................................................................................................TTCCGAAAACGTTATAAATTTTAT.....2470.2920200000000
.....................................................................................................................................................................TGAGACAACGAGCTTTTTCGCTGA...............................................................24140.2940400000000
.................................................................................................................................................................................................GATTGTTCAATAATTTCACAAATTAT.................................2670.2920110000000
....................................................................................................................................................................................................TGTTCAATAATTTCACAAATTA..................................2280.2520200000000
..................................................................................................................................................................TGTTGAGACAACGAGCTTTTTC....................................................................22140.2130100000020
......................................................................................................................................................................................TCGCTGACTATGATTGTTCAATAATTT...........................................27120.1720200000000
......................................................................................................................................................................................TCGCTGACTATGATTGTTCA..................................................20130.1520200000000
.......................................................................................................................................................................................CGCTGACTATGATTGTTCAATAATT............................................25130.1520200000000
................................................................................................................................................................................................................................TCCGAAAACGTTATAAATTTTAT.....2370.1410100000000
.............................................................................................................................................................................................................................ATTTCCGAAAACGTTATAAATTTTAT.....2670.1410100000000
.....................................................................................................................................................................TGAGACAACGAGCTTTTTCGCTGAA..............................................................25140.1420200000000
....................................................................................................................................................................................................................................AAAACGTTATAAATTTTATTA...2170.1410100000000
...........................................................................................................................................................................................................................TAATTTCCGAAAACGTTATAAATT.........2470.1410100000000
...........................................................................................................................................................................................................TAATTTCACAAATTATTAATTTCCGA.......................2670.1410100000000
....................................................................................................................................................................................................TGTTCAATAATTTCACAAATTATA................................2470.1410100000000
.............................................................................................................................................................................................................................ATTTCCGAAAACGTTATAAATTTT.......2470.1410100000000
..............................................................................................................................................................................................................................TTTCCGAAAACGTTATAAATTTTATA....2670.1410100000000
...................................................................................................................................................................................................TTGTTCAATAATTTCACAAATTATTAAA.............................2870.1410100000000
.......................................................................................................................................................................................................TCAATAATTTCACAAATTAT.................................2070.1410100000000
...................................................................................................................................................................................................TTGTTCAATAATTTCACAAATTATTAATT............................2970.1410100000000
........................................................................................................................................................................................................CAATAATTTCACAAATTAT.................................1970.1410100000000
...............................................................................................................................................................................................................................TTCCGAAAACGTTATAAATTTTATTA...2670.1410100000000
....................................................................................................................................................................................................TGTTCAATAATTTCACAAATTATTAA..............................2670.1410100000000
..............................................................................................................................................................................................................................TTTCCGAAAACGTTATAAATTTTA......2470.1410000001000
...............................................................................................................................................................................................................................TTCCGAAAACGTTATAAATTTTA......2370.1410100000000
..................................................................................................................................................................TGTTGAGACAACGAGCTTTTTCC...................................................................23150.1320000000020
...................................................................................................................................................................................................TTGTTCAATAATTTCACAAATT...................................2280.1310100000000
..................................................................................................................................................................TGTTGAGACAACGAGCTTTTT.....................................................................21160.1320200000000
..........................................................................................................................................................................................TGACTATGATTGTTCAATAATTTCACAAA.....................................2980.1310100000000
..............................................................................................................................................................................................TATGATTGTTCAATAATTTCACAA......................................2480.1310000000010
..........................................................................................................................................................................................TGACTATGATTGTTCAATAATTTCACAA......................................2880.1310100000000
................................................................................................................................................................................................TGATTGTTCAATAATTTCACAAAA....................................2490.1110100000000
................................................................................................................................................................................................TGATTGTTCAATAATTTCACAAAT....................................2490.1110100000000
..........................................................................................................................................................................CAACGAGCTTTTTCGCTGACTATG..........................................................24110.0910000000010
....................................................................................................................................................................................TTTCGCTGACTATGATTGTTCAATAATT............................................28120.0810100000000
...................................................................................................................................................................................TTTTCGCTGACTATGATTGTTCAATAAT.............................................28120.0810000000010
....................................................................................................................................................................................TTTCGCTGACTATGATTGTTCAATAA..............................................26120.0810100000000
.....................................................................................................................................................................................TTCGCTGACTATGATTGTTCAATAAT.............................................26120.0810100000000
...................................................................................................................................................................................TTTTCGCTGACTATGATTGTTCA..................................................23130.0810100000000
..................................................................................................................................................................................TTTTTCGCTGACTATGATTGTTCA..................................................24130.0810000000100
....................................................................................................................................................................................TTTCGCTGACTATGATTGTTCAATA...............................................25130.0810100000000
.......................................................................................................................................................................................CGCTGACTATGATTGTTCAATAAT.............................................24130.0810100000000
......................................................................................................................................................................................TCGCTGACTATGATTGTTCAAT................................................22130.0810100000000
..................................................................................................................................................................................TTTTTCGCTGACTATGATTGTTCAA.................................................25130.0810100000000
.......................................................................................................................................................................................CGCTGACTATGATTGTTCAATAATTT...........................................26130.0810100000000
...................................................................................................................................................................................TTTTCGCTGACTATGATTGTTCAA.................................................24130.0810000000010
..................................................................................................................................................................TGTTGAGACAACGAGCTTTTTCGCTGAC..............................................................28140.0710100000000
.....................................................................................................................................................................TGAGACAACGAGCTTTTTCGCTGACC.............................................................26140.0710100000000
......................................................................................................................................................................................TCGCTGACTATGATTGTT....................................................18140.0710100000000
..................................................................................................................................................................TGTTGAGACAACGAGCTTTTTCAA..................................................................24140.0710100000000
.........................................................................................................................................................................................CTGACTATGATTGTTCAATAAT.............................................22140.0710100000000
..................................................................................................................................................................TGTTGAGACAACGAGCTTTTTCG...................................................................23140.0710100000000
.......................................................................................................................................................................................CGCTGACTATGATTGTTCAATA...............................................22140.0710100000000
..........................................................................................................................................................................................TGACTATGATTGTTCAATAATTT...........................................23140.0710100000000
......................................................................................................................................................................GAGACAACGAGCTTTTTCGCTGAC..............................................................24140.0710100000000
.....................................................................................................................................................................TGAGACAACGAGCTTTTTCG...................................................................20150.0710000100000
..............................................................................................................................................................................................TATGATTGTTCAATAATTTCAC........................................22150.0710100000000
.....................................................................................................................................................................TGAGACAACGAGCTTTTTCGC..................................................................21150.0710000000001
.....................................................................................................................................................................TGAGACAACGAGCTTTTTCGCTG................................................................23150.0710100000000
........................................................................................................................................................................GACAACGAGCTTTTTCGCTGAC..............................................................22160.0610000100000
droPer2
TCTGAGTCGCCTCTACGGCCACATGGCCAATCCGGT-GCAGAAGCGTAGCGGTGAGTATCCATCACCCAGTATCCCAGAGCCTCTACCCTTCTAATCGAACAGTAATGCCATTAAACAGTAATTTGGTTGGGGGCTAGCTCATTAATATGTGCAAAGGAGGC------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TTTGAGTCGCTTGTATGGACACATGGTGGA-------AAAGAGAAGTGGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TTTGAGTCGTTTGTACGGGCATATGGCAAACCCGAT-ACAGAAACGAAGCGGTAAGTGCACAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................AACCCGAT-ACAGAAACGAAG...........................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
................GGGCATATGGCAAACCCGAT-.......................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......CGTTTGTACGGGCATATGG..................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
droMoj3
CTTGAGTCGCCTCTACGGGCACATGGCCAACCCCAT-ACAGAAGCGTAGCGGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TTTGAGCCGCTTGTACGGACACATGGCAAATCCGAT-ACAAAAACGTAGCGGTAAGTATTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
TTTGAGCCGCTTGTACGGCCACATGGCCAATCCCAT-CCAGAAGCGGGGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TTTGAGCCGCTTGTACGGACACATGGCCAATCCCAT-CCAGAAGAGGAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TTTAAGCCGTCTCTACGGGCACATGGCCAATCCCAT-CGTGAAGCGGAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTTGAGCCGTTTGTATGGACACATGGCCAATCCCAT-CGTCAAGCGGAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TTTGAGCCGTTTGTACGGACACATGGCCAATCCCAT-TGTGAAGCGTAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTTGAGCCGTTTGTACGGACACATGGCCAATCCCAT-CGTGAAGCGCAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TTTGAGCCGTCTGTATGGACACATGGCCAATCCCAT-CGTGAAGCGGAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TTTGAGCCGTTTGTACGGACACATGGCCAATCCCAT-CGTGAAGCGGAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TTTGAGCCGCCTGTACGGACACATGGCCAATCCCAT-TGTGAAGCGGAATGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TTTGAGTCGTTTGTACGGGCACATGGCCAATCCCAT-CGTGAAGCGGAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................TGGCCAATCCCAT-CGTGAAGCGGAGCGAA.......................................................................................................................................................................................................2918.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CCAATCCCAT-CGTGAAGCGGAGCT.........................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTGAGTCGTTTGTACGGGCACATGGC.................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GCACATGGCCAATCCCAT-CGT....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
droSim2
TTTGAGTCGTTTGTACGGGCACATGGCCAATCCCAT-CGTGAAGCGGAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
TTTGAGTCGTTTGTACGGGCACATGGCCAATCCCAT-CGTGAAGCGGAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TTTGAGCCGTTTGTACGGGCACATGGCCAACCCCATTCGTGAAGCGGAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TTTGAGCCGTTTGTACGGCCACATGGCCAATCCCAT-CGTGAAGCGGAGCGGTAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 11:32 PM