ID:

dps_864

 Coordinate:

2:29307932-29308112 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.0 -18.7 -18.6 -18.6

Flybase annnotation

exon [dpse_GLEANR_6450:3]; CDS [Dpse\GA14631-cds]; exon [dpse_GLEANR_6450:2]; CDS [Dpse\GA14631-cds]; intron [Dpse\GA14631-in]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------######################----------------------------
GCATACACAATGGCCAAGGAGTACCTGTTCGATAAGGAGCCCAAGGAAAAGTAATGCCAGCCATCCCACTTAGTTAATCGTAGCTGTAGTTATAGTTGTTGTCTTTTGTATATAAGTCGCTGGCACACAAACCCCACACACAATTCGCAGTGTGTCGCTGAATACTTATTTCTCATCAACCCACCGTTTTATGTTACTCACCCTTCCCCCAATTTTGATTTCTCATTTTAGTTCCAAGCCACTGACTAACTAAAGCTCATTTCTGATTGTGCGGCCACTTA
***************************************************************.........................((....((((.............((((((((.((((((((.....................)))))))).)))...))))).......))))..)).************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 M059
embryo
 M062
head
 GSM444067
head
 SRR902011
testis
 SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................TTTAGTTCCAAGCCACTGACT.................................. 21 0 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................................................................................CTTATTTCTCATCAACCCACC................................................................................................ 21 0 1 2.00 2 2 0 0 0 0 0 0
....................GTACCTGTTCGATAAGGAGCCCAAG............................................................................................................................................................................................................................................ 25 0 1 2.00 2 2 0 0 0 0 0 0
........................CTGTTCGATAAGGAGCCCAAG............................................................................................................................................................................................................................................ 21 0 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................................................................................................................................................AGTTCCAAGCCACTGACTAAC............................... 21 0 1 2.00 2 2 0 0 0 0 0 0
...................................................................................................................................................................................................................................................GACTAACTAAAGCTCATTT................... 19 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................TCCCACTTAGTTAATCGTAGCTGTA................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................GTCGCTGGCACACAAACCC................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................CAATTCGCAGTGTGTCGCTGAATACT................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................TTAGTTCCAAGCCACTGACT.................................. 20 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................................ATTCGCAGTGTGTCGCTGA........................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................GACTAACTAAAGCTCATTTCTGATT............. 25 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................TTTCTGATTGTGCGGCCACTTA 22 0 1 1.00 1 1 0 0 0 0 0 0
......ACAATGGCCAAGGAGTACC................................................................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0
.....CACAATGGCCAAGGAGTACCT............................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
..........TGGCCAAGGAGTACCTGTTC........................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................GCTCATTTCTGATTGTGCGGCCA.... 23 0 1 1.00 1 0 0 0 0 1 0 0
.......................................................................................................TTTTGTATATAAGTCGCTGGC............................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................CCGTTTTATGTTGCTCACCCT............................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0
.................................AAGGAGCCCAAGGAAAATT..................................................................................................................................................................................................................................... 19 1 1 1.00 1 0 0 0 0 1 0 0
.................................AAGGAGCCCAAGGAAAAGTAA................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
GCATACACAATGGCCAAGGAG.................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................TTTATGTTACTCACCCTTCCC......................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
..........................GTTCGATAAGGAGCCCAAGGA.......................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................TATATAAGTCGCTGGCACACAAACCCC.................................................................................................................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0
...................AGTACCTGTTCGATAAGGAGCCCAAGG........................................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0
......................................................................TAGTTAATCGTAGCTGTAGTT.............................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0
....................................GAGCCCAAGGAAAAGTAATGCCAGCCATC........................................................................................................................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0 0 0
..................GAGTACCTGTTCGACAAGGCGCCCATG............................................................................................................................................................................................................................................ 27 3 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................AACTAAAGCTCATTTCTGATTGTGCGGC...... 28 0 1 1.00 1 0 0 1 0 0 0 0
..................GAGTACCTGTTCGATAAGGAGCCCAAG............................................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0
GCATACACAATGGCCAAGGAGTACCT............................................................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................................CACTGACTAACTAAAGCTCATTTCTGATT............. 29 0 1 1.00 1 0 0 1 0 0 0 0
...........GGCCAAGGAGTACCTGTTC........................................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
......ACAATGGCCAAGGAGTACCTG.............................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................CAATTCGCGGTGTGTCGCTGAA....................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
...................AGTACCTGTTCGATAAGGAGC................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0
.........................TGTTCGATAAGGAGCCCAAG............................................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0
......ACAATGGCCAAGGAGTACCT............................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0
...........................................AGGAAAAGTAATGCCAGCCAT......................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................GCTGTAGTTATAGTTGTTG.................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
................AGGAGTACCTGTTCGATAAG..................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0
........................................................................GTTAATCGTAGCTGTAGTT.............................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................CTAAAGCTCATTTCTGATTGTGC......... 23 0 1 1.00 1 0 0 1 0 0 0 0
............................................................................................................................................................................................................................................................GAGCTCATTTCTGATTGTGCGGCC..... 24 1 1 1.00 1 0 0 0 1 0 0 0
.CATACACAATGGCCAAGGAGT................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
..........TGGCCAAGGAGTACCTGTTCG.......................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................AATCGTAGCTGTAGTTATAGT......................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................AGCCACTGACTAACTAAAGCT........................ 21 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................................................................TCATTTCTGATTGTGCGGCC..... 20 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................................CTGACTAACTAAAGCTCATTTCTGATT............. 27 0 1 1.00 1 0 0 0 0 0 1 0
.................................................................................................................................................................................................................................................................CATTTCTGATTGTGCGGCC..... 19 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................TGTAGTTATAGTTGTTGTC.................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0
......................ACCTGTTCGATAAGGAGCCC............................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................TTTCTGATTGTGCGGCCACTT. 21 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................ACAGTTCGCAGTGTGTCGCTT......................................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0
......................................................................TAGTTAATCGTAGCTGTAGT............................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................CACACAATTCGCAGTGTGTCGCT.......................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
..........................................AAGGAAAAGTAATGCCAGCCATC........................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0
............GCCAAGGAGTACCTGTTCGACAAGGC................................................................................................................................................................................................................................................... 26 2 1 1.00 1 1 0 0 0 0 0 0
...............................ATAAGGAGCCCAAGGAAAA....................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
......ACCATGGCCAAGGAGTACCTGA............................................................................................................................................................................................................................................................. 22 2 2 0.50 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................................ACCAAAGCTCAAATCTGATT............. 20 3 17 0.18 3 3 0 0 0 0 0 0
..................................GGGAGACCAAGGAAAAGTA.................................................................................................................................................................................................................................... 19 2 8 0.13 1 0 0 1 0 0 0 0
..ATACACAATGGACAAGGT..................................................................................................................................................................................................................................................................... 18 2 11 0.09 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................ATTTCTGAATGTGCGGCAG.... 19 3 20 0.05 1 0 0 0 0 0 0 1
..................................................................................................................................................................................................TACTCACCCGTCCGCCACT.................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0

Anti-sense strand reads

CGTATGTGTTACCGGTTCCTCATGGACAAGCTATTCCTCGGGTTCCTTTTCATTACGGTCGGTAGGGTGAATCAATTAGCATCGACATCAATATCAACAACAGAAAACATATATTCAGCGACCGTGTGTTTGGGGTGTGTGTTAAGCGTCACACAGCGACTTATGAATAAAGAGTAGTTGGGTGGCAAAATACAATGAGTGGGAAGGGGGTTAAAACTAAAGAGTAAAATCAAGGTTCGGTGACTGATTGATTTCGAGTAAAGACTAACACGCCGGTGAAT
************************************************************************************************.........................((....((((.............((((((((.((((((((.....................)))))))).)))...))))).......))))..)).*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 SRR902011
testis
 M022
male body		 GSM444067
head
 M062
head
 GSM343916
embryo
................................................................................................................................................................................................CAATGAGTGGGCAGGCGGTGA.................................................................... 21 3 1 228.00 228 181 46 0 0 0 1 0
................................................................................................................................................................................................CAATGAGTGGGCAGGCGG....................................................................... 18 2 3 130.00 390 373 13 0 3 1 0 0
.................................................................................................................................................................................................AATGAGTGGGCAGGCGGTGA.................................................................... 20 3 4 127.25 509 395 113 0 0 1 0 0
................................................................................................................................................................................................CAATGAGTGGGCAGGCGGT...................................................................... 19 2 1 88.00 88 70 17 0 1 0 0 0
.................................................................................................................................................................................................AATGAGTGGGCAGGCGGT...................................................................... 18 2 4 49.25 197 183 13 0 1 0 0 0
..................................................................................................................................................................................................ATGAGTGGGCAGGCGGTGA.................................................................... 19 3 20 39.95 799 625 172 0 0 2 0 0
................................................................................................................................................................................................CAATGAGTGGGCAGGCGGTG..................................................................... 20 3 5 35.40 177 149 26 0 2 0 0 0
...............................................................................................................................................................................................GCAATGAGTGGGCAGGCGGT...................................................................... 20 3 8 7.75 62 48 14 0 0 0 0 0
........................................................GGTCGGTAGGGTGAATCAATT............................................................................................................................................................................................................ 21 0 1 4.00 4 1 0 3 0 0 0 0
...................................................................................................................................................................................................TGAGTGGGCAGGCGGTTA.................................................................... 18 2 6 3.83 23 15 8 0 0 0 0 0
................................................................................................................................................................................................CAATGAGTGGGCAGGCGGTT..................................................................... 20 2 1 3.00 3 2 1 0 0 0 0 0
...........................................................................................................................GTGTGTTTGGGGTGTGTGT........................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0
....................................................TTACGGTCGGTAGGGTGGAT................................................................................................................................................................................................................. 20 1 1 2.00 2 2 0 0 0 0 0 0
.................................................................................................................................................GCGTCACACAGCGACTTATGA................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0
.....................................................................................................................................GGTGTGTGTTAAGCGTCAC................................................................................................................................. 19 0 1 2.00 2 1 1 0 0 0 0 0
.................................................................................................................................TTGGGGTGTGTGTTAAGCGT.................................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0
................................................................................................................................TTTGGGGTGTGTGTTAAGCGT.................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
............................................................GGTAGGGTGAATCAATTAGCA........................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................................................AAAGAGTAGTTGGGTGGCAAA............................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................................................................TGGGTGGCAAAATACAATG.................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
................................................TTCATTACGGTCGGTAGGGT..................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
..................CTCATGGACAAGCTATTCCTC.................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................TTGGGTGGCAAGGTACAATGA................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0
.....................................TCGGGTTCCTTTTCATTACGGT.............................................................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0
............................................................................................................................................................................................................AGGGGGTTAAAACTAAAGAGT........................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
.......................GGACAAGCTATTCCTCGGGT.............................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................CAGCGACCGTGTGTTTGGGG.................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................................................ACTTATGAATAAAGAGTAGT....................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0
........................................................................................................................................................................AAAGAGTAGTTGGGTGGCAAG............................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................................................GTGTTTGGGGTGTGTGTTAA........................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0
...................................CCTCGGGTTCCTTTTCATTACGG............................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................TCAACAACAGAAAACATATAT....................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................GGGTGTGTGTTAAGCGTCAC................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0
.GTATGTATTACCGGTTCCTCG................................................................................................................................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................TTATATTCAGCGACCGTGTGTT....................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................................CGGTGACTGATTGATTTCGA........................ 20 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................AATGAGTGGGCAGGCGGTT..................................................................... 19 2 2 1.00 2 2 0 0 0 0 0 0
.......................................................................................................................GACCGTGTGTTTGGGGTGTGT............................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................TCGGTGACTGGTTGATTTCGA........................ 21 1 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................AACAGAAAACATATATTCAGC.................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0
...............TTCCTCATGGACAAGCTATTC..................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................................................................................AGAGTAGTTGGGTGGCAAAAT.......................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................TGAGTGGGAAGGCGGTGA.................................................................... 18 2 6 1.00 6 1 5 0 0 0 0 0
..............................................................................................................................................................................................CACAATGAGTGGGCAGGCGGT...................................................................... 21 3 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................AGCGTCACACAGCGACTTATG.................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................TGTGTTTGGGGTGTGTGTTG......................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................................TTCGAGTGAAGACTAACACGC........ 21 1 1 1.00 1 0 1 0 0 0 0 0
............................................................................................................................................................................AGTAGTTGGGTGGCAAAATA......................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0
.................................................................................................................................................GCGTCACACAGCGACTTATG.................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................TGTTTGGGGTGTGTGTTAAG....................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................GGGTGGCAAAATACAATGAG.................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................................................CAATGAGTGGGAAGGCGGTGA.................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................................................................................................ACAATGAGTGGGCAGGCGG....................................................................... 19 2 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................................GAGTAGTTGGGTGGCAAGGTA......................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0
............CGGTTCGTCATGGATAAGCT......................................................................................................................................................................................................................................................... 20 2 2 0.50 1 0 0 0 0 1 0 0
......................................................................................TTCAATATCAACAACATAAAATAT........................................................................................................................................................................... 24 3 5 0.40 2 2 0 0 0 0 0 0
.......................................................................................TCAATATCAACAACATAAAATAT........................................................................................................................................................................... 23 2 3 0.33 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................ATGAGTGGGCAGGCGGTT..................................................................... 18 2 3 0.33 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................................AAGGGGGTTCAAACTTAAGA.......................................................... 20 2 3 0.33 1 0 1 0 0 0 0 0
...................................................................................................................................................................................................TGAGTGGGCAGGCGGTGAA................................................................... 19 3 20 0.30 6 5 1 0 0 0 0 0
...............................................................................................................................................................................................CCAATGAGTGGGCAGGCGGT...................................................................... 20 3 4 0.25 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................AATGAGTGGGCAGGCGGTGAA................................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................ATGAGTGGGCAGGCGGTGAA................................................................... 20 3 7 0.14 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................ATGAGTGGGCAGGCTGTTA.................................................................... 19 3 8 0.13 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................CGCAATGAGTGGGAAGGCGG....................................................................... 20 3 8 0.13 1 0 1 0 0 0 0 0
................................................................................................................................................................................................CAATGAGTGGGCAGGCGGA...................................................................... 19 3 9 0.11 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................AGGGGGTTCAAACTTAAG........................................................... 18 2 10 0.10 1 1 0 0 0 0 0 0
................................................................................................................................................................................................CAATGAGTGGGCAGGCGGG...................................................................... 19 3 20 0.10 2 1 1 0 0 0 0 0
.................................................................................................................................................................................................AATGAGTGGGCAGGTGGTGA.................................................................... 20 3 10 0.10 1 0 1 0 0 0 0 0
................................................................................................................................................................................................CAATTAGTGGGCAGGCGGT...................................................................... 19 3 10 0.10 1 0 1 0 0 0 0 0
...................................................................................................................................................................................................TGAGGGGGAAAGGGGTTA.................................................................... 18 2 15 0.07 1 1 0 0 0 0 0 0
............................................................................................................................................................TGACTTATGACTAACGAGTA......................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 1
................................................................................................................................................................................................CAATGAGTGGTCAGGCGG....................................................................... 18 3 20 0.05 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................TGAGTGGGCAGGGGGTGAT................................................................... 19 3 20 0.05 1 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:29307882-29308162 + dps_864 GCATACACAATGGCCAAGGAGTACCTGTTCGATAAGGAGCCCAAGGAAAAGTAATGCCA-GCCATCCC-----------ACTTA---GTTAATCGTAGCTG---TAGTTATAGTTGTTGTCT-TTTGT-ATA------------------TAAGTCGCTGGCACACA----------------AACCCCAC--ACA-----CAATTCG--------------------------------------------------------------------CAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTCGCTGAATAC---TTATTTC-TCATCA-------------------------------------------ACCCACCGTTTTATG----------------------------TTACTCAC-----CCTTCCCCCAATTTTGAT----TTCTCATTTTAGTTCCAAGCCACTGACTAACTAAAGCTCATTTCTGATTGTGCGGCCACT------TA
droPer2 scaffold_6:4673504-4673784 + GCATACACAATGGCCAAGGAGTACCTGTTCGATAAGGAGCCCAAGGAAAAGTAATGCCA-GCCATCCC-----------ACTTA---GTTAATCGTAGCTG---TAGTTATAGTTGTTGTCT-TTTGT-ATA------------------TAAGTCGCTGGCACACA----------------AACCCCAC--ACA-----CAATTCG--------------------------------------------------------------------CAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTCGCTGAATAC---TTATTTC-TCATCA-------------------------------------------ACCCACCGTTTTATG----------------------------TTACTCAC-----CCTTCCCCCAATTTTGAT----TTCTCATTTTAGTTCCAAGCCACTGACTAACTAAAGCTCATTTCTGATTGTGCGGCCACT------TA
droWil2 scf2_1100000004943:7407556-7407638 - GCCTATACGATGGCCAAGGAATATCTCTTCGACAAGCAGCCCAAGGAAAAGTAATGCCTAAAGTTCC------------ACC---------------GATA---TAGTTTTAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13047:3438566-3438791 + dvi_15388 GGATATCAAATGGCTAAGGAGTATCTGTTTGACAAGGCGCCCAAAGAAAAGTAATGCTC--GCTTCTT-CGTA--TA--ATTTA---TTTAAATGTAGCTG---TAT------ATGTTATT---TAGT-GTA------------------ATTGTTGTTGGATTATCAGACACTACGCAG----------------------A---------------------------------------------------------------------------------------------GCTCATTTATTGTATTTGCCATTATTTAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------AATTTCATTTTTATTTTAGTTTGAAGTCTTTGACTAATTAATACAAAT--TTGATTG------------------
droMoj3 scaffold_6540:20451570-20451826 + GGCTATCAGATGGCCAAGGAGTATCTGTTCGACAAGAAGCCCAAGGAGAAGTAATGCTT--CATTCTATATTAACTTTCACTTAAATGTTAAATGTAGTT-TTGTAAT------TGTAATC---TAGTTG-AATTGTTGGATT-ATCAG---------ATGCGCCCCGAGAATCGCGAATT---ATCTC--A--------------------------------------------------------------------------------------------------------GCTAACTCTATATATTTGTCATTATTTAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAT----ATTTCATTTTTATTTTAGTTTGAAGTCTTTACATAATTAATACACAT--TTGATTGAATTG-------------
droGri2 scaffold_14906:96367-96603 + GGCTATCAAATGGCCAAGGAGTATCTTTTCGAAAAGGAGCCGAAGGAAAAGTAATGCCT--ACTCCTT-ACTAACTT--ATGTA---GTTCAATTTAGCCG---TATTTGT------ACTT---TAATTGTAATTGCTGTCCAAATCATACACA----T----CACACGAAAGGCG-----------------------------------------------------------------------------------------------------------TTCTCTTTTAATAGCTGCTGTTTTGTGTTTGACTTTATTTAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-ATTTT----CATTTTGTATTTTAGTGTGAAGTCATTGACTAATTAATGC-------------------------------
droAna3 scaffold_13340:10766011-10766346 + GCCTATTCGATGACCAAGGAGTACATATTCGACAAGGCTCCCAAGGAGAAGTAATGACG--CGTTCCT-----------ACTTA---GTTAGCTCTAGCA-TAGTAGTCGTAATTGTTCTCT---TGT-ATC-TTG--------------TAAGTCCTTCGCACACAAGACAGTCCAAATTCTGATATC--TACCACCTCCTAATTC-C-----------------------------------------------CGGAAATAT-------------------------------------------------------------TGTTT---TATTTT---TTACA----TTGC------------------------------------------------------------------------------------------------TTAAGTTGTGTGTCGTCCACCAC---T-ATTTC---ATTGCCAATTTCC----------------TTGTT---GTA--CAA-------C----TCATT----------------------------TCACGTATT---------CT-----CTTTATTTTATTTTTATTTTAGCCCCAAATCCCTGACTAACTAAC--TCGA--TTGAATGTTCGGACTCTC-------
droBip1 scf7180000396374:318212-318525 - GCCTATTCGATGGCCAAGGAGTACATATTCGACAAGGCTCCCAAGGAAAAGTAATGACG--CGTTCCT-----------ACTTA---GTTAAATCTAGCAGTAGTAGTCGTAATTGTTGTAT-CTTG-----------------------TAAGTCCTTCGCACACAAGAAAGTCGAGATCCTAATATG--TACCA-------CCCC-C-----------------------------------------------TAAT---AA-------------------------------------------------------------TGTTTTGCTTTAATTATTTTTA----TTTCC---------------------------------------------------------------------------------------------------------------------------------TTGCCA-------------------------------------------ACGAAACAGTTTGTGTGACTTCCCATCTGATGTACAATTCATTTTACCTATT--------CCT-----TTTATTTTTATTTTTATTTTAGCCCCAAATCCCTGACTAACTAAAAC--GA--TTGAATGTTCGG-------------
droKik1 scf7180000302276:693347-693692 + GCCTACAGTATGGCTAAGGAGTACCTCTTCGAAAAGGCGCCCAAGGAGAAGTAAGGACTCGAGTTCCT-----------ACTTA---GTTAATACTAGCTG---TAGTTGTAGTTGATGTCA-CTCG-----------------------TAAGTCGTTCGCACACAAGAGACCTCGAA-CCCAATCCT--AATTC-----GAATCT-------------------------------------------------TAA----TT-------------------------------------------------------------TGTTT---ATTCGATTTCTATT-TTATTTTAAA---CTTTTTGT-------------------------------------C--TTATTTTACGAAAA----------------------------------------CAGTTGAA---TATTTATTTAA-------------------------------TCATC---ACC--C---------TTTTATTATC----------------------------ATTTTTATCTCACATTTAC-------CTGATTTTTGTTTCATTTTAGTACCAAGTCACTGACTAACTAAA-CTCAT--ATGATTGTAAGACCTCCCTCTTCAA
droFic1 scf7180000453912:1832432-1832765 + GCCTACAGCATGGCCAAGGAGTACCTGTTCGACAAGGCGCCCAAGGAAAAGTAATGCTC--AGTTCCT-----------ACTTA---GTTAATACTAGTTG---TAGGTTAAATTGTTGTCT-C----------------------------------ACGAACACAAAACACTTCGAATCCTTATCAA--AATA-----------T----------TTGTAATATTTGTTTTTTA---AAAACACATGCCCTTA-----AAATATGTTTTATGTGTAATTTATAC-------------------------------------------------------------------------------------------------------------------------AT------------------------------------------------------------ACTTAATATTT------------------GCTTTATTATATAATTTATTTGTCTCATTGTATTATCCCTAATTGGTTTATA----------------------------TCACCTAAT-----CCCCCT-----TTTGATTTATTTTTCATTGTAGTGCAAAGTCATTGACTAACTAAAAATCAT--CT-----------------------
droEle1 scf7180000491080:2635220-2635359 + GCCTACAGCATGGCCAAGGAGTACCTATTCGACAAGGCGCCCAAGGAAAAGTAATACCC--AGTTCCT-----------ACATA---GTTAATGCTAGCTG---TACTTATAGTTGTTGTCT-C----------------------------------TCGTACACAAGAAACCTCGAATCCCAATCAT--AATCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000780060:41834-42022 + GCCTACAGCATGGCCAAGGAGTACCTATTCGACAAGGCGCCCAAGGAAAAGTAATGCCC--AGTTCCT-----------ACTTA---GTTAATACTAGCTG---TACTTCTAGTTGTTGTCT-C----------------------------------TCGTACGCAAGAATCCTCGAATCTGAATCAT--AA-----------TCC-C-----------------------------------------------TAA-AAAAT-------------------------------------------------------------TGTTT---A-------GTTTTA----TTTCCAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAAGCCTTATG----------------------------TTTCTCA------------------------------------------------------------------------------------------------
droBia1 scf7180000302075:3694044-3694337 + GCCTACAGCATGGCCAAGGAGTACCTGTTCGACAAGGCGCCCAAGGAGAAGTAATGGCC--AGTTCCT-----------ACTTA---GTTAATACTAGCTG---TAGTTATAGTTGTTGTCA-C----------------------------------TCGTACACGAA---GCTCCAAGCCCAATCCC--AAG---------------------------------------------------------CTTC-----ACACTTGTCTAATTCGAAATTTGTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCCTACTGTTTATTTAT-------------------------------TTACC---TTG--TGTTCCCCTATTGGTTTATT----------------------------TCACTTAC-------CCCCC-----TTTGGTTTATTCTTTATTTTAGTACAAAGTCACTGAATAACTAAAGCTCAT--CTGATTGTATGGCCTCCC-------
droTak1 scf7180000413959:58603-58926 + GCCTACAGCATGGCCAAGGAGTACCTGTTCGACAAGGCGCCCAAGGAGAAGTAATGGCC--AGTTCCT-----------ACTTA---GTTAATACTAGACG---TAGTTTTAGTTGTTGTCG-C----------------------------------TCGTACACAAGAAATACCGCAGCCCAATCCCATAATCC--TTTTAATCTG--------------------------------------------------------------------AAAT---------------------------------------------------------------------------------------------------------------------------------------A-----TCATAGTTGTCTATTTATTGTTAATGGTTACTTAAATTATCGAT----------TATCTATTTAT-------------------------------TTATT---TTG--TAATCCCCAATTGGTTTCTT----------------------------CCACTTATC-----CCCCCT-----TTTCATTTATTCTTCATTTTAGTACAAAGTCGTTGACTAACTAAAGATCAT--TTGATTGTACGGCCTCCC-------
droEug1 scf7180000409797:687189-687537 - GCCTACAGTATGGCGAAGGAATACTTGTTCGACAAGGCGCCTAAGGAAAAGTAATGGGC--AGTTCCT-----------ACTTA---GTTAATGCTAGTTG---TAGTTTTAGATG---TCA-T----------------------------------TCGTACACAAAAATCC--GAAAACCAATCG-------------ATATCC-CAAATATGCTTGTAA-ACTAGTTATATTCCCATA--TCAATCTCTTC-----ATATTTGTATATTTTGAACTTTATAC-------------------------------------------------------------------------------------------------------------------------CTACCTTAA-----CCGTTAT-----------------------------------------------TTTATATTTAT-------------------------------TTATC---TGT--TGATCCCTTATTGGTTTATC----------------------------TTACTTATT-----CCCCCT-----TTTGATTTGTTCTTCGTTTTAGTACAAAGTCATTGACTAACTAAA--CCAT--TTGATTGTACGGCATCCCTCTCTAA
dm3 chr3R:7068244-7068595 - GCCTACAGCATGGCCAAGGAGTACCTGTTCGACAAGGCGCCCAAGGAAAAGTAATGGAC--AGTTCCT-----------ACTTA---GTTAATACTAGCTG---TAGCTTAAGTTGTTTTAACC----------------------------------GCGTACAGAAAGAATCCTGAATCCCAATCCC--AATTG-----A-ATCC-C-----------------------------------------------CAATACAAT-------------------------------------------------------------TGTTT---CATATTTATGTCTA----TTTCCAAATGCTTTCGGTTTCCACATGTCTATTAACATTCACTGAAACGCATATTC--CCATAT-----TCATGAC-----------------------------------------------TGTCTATTTAG-------------------------------TTTTC---ATA--CGT-------TTTGAT--------------------------------TTATTTATT-----TCCCCT--A--TTTGATTTACTCTTAATTTTAGCACAAAGTCATTGACTAACTAAAGACCAT--CTGATTGCTCGGC------------
droSim2 3r:14024911-14025265 + dsi_20349 GGCTACAGCATGGCCAAGGAGTACCTGTTCGACAAGGCGCCCAAGGAGAAGTAATGCCC--AGTTCCT-----------ACTTA---GTTAATACTAGCTG---TAGCTTAAGTTGTTGTAA-C----------------------------------GCGTACACAAGGAATCCTGAATCCCAATCCC--AATTG-----AAATCC-C-----------------------------------------------CAATACAAT-------------------------------------------------------------TGTTT---CATAATTATGTCTA----TTACCAAATGCTTTCGGTTTCCACGTGTCTATTAACATTCACTCAAACGCATATTC--CCATTT-----TCATGAC-----------------------------------------------TGTCTATTTAG-------------------------------TTTTC---ATA--CGT-------TTGGATTACC----------------------------TTATTTATT-----TACCCT-----TTTGATTTAATCTTCATTTTAGTACAAAGTCATTGACTAACTAAAGACCAT--CTGATTGCTCGGC------------
droSec2 scaffold_0:14886218-14886572 + GGCTACAGCATGGCCAAGGAGTACCTGTTCGACAAGGCGCCCAAGGAGAAGTAACGCCC--AGTTCCT-----------ACTTA---GTTAATACTAGCTG---TAGTTTAAGTTGTTGTAA-C----------------------------------GCGTACACAAGGAATCCTGAATCCCAATCCC--AATTG-----AAATCC-C-----------------------------------------------CAATACAAT-------------------------------------------------------------TGTTT---CATAATTATGTCTA----TTTCCAAATGCTTTCGGTTTCCACATGTCTATTAACTTTCACTCAAACGCATATTC--CCATTT-----TCATGAC-----------------------------------------------TGTCTATTTAG-------------------------------TTTTC---ATA--CGT-------TTGGATTACC----------------------------TTATTTATT-----TACCCT-----TTTGATTTAATCTTCATTTTAGTACAAAGTCATTGACTAACTAAAGACCAT--CTGATTGCTCGGC------------
droYak3 3R:11101327-11101679 - GCCTACAGCATGGCCAAGGAGTACCTGTTCGACAAGGCGCCCAAGGAGAAGTAATGGAC--AGTTCCT-----------ACTTA---GTTAATACGAGCTG---TAGTTTAAGTGGTTGTAA-C----------------------------------GCGTACACAAGAAACCTGGAAGCCCAATCCC--AACTC-----A-ATC--------------------------------------------TCTCCTCAACACAAT-------------------------------------------------------------TGTTG---CTTCTTGATTTATA----TTTCCAAATGGTTTCGGTTTCCACATGTCTTTTTAAATTCACTTGAACGCA-------CCATAT-----CCATTTT-----------------------------------------------TGTCTATTTAG-------------------------------TTTCA---ATA--TGA-------TTTGATCACC----------------------------TTATTTATT-----TACCCT-----TTTGGTTTATTCTTCATTTTAGTACAAAGTCATTGACTAACTAAAGATCAT--CTGATTGCACGGC------------
droEre2 scaffold_4770:14551682-14552022 + GCCTACAGCATGGCCAAGGAGTACCTGTTCGACAAGGCGCCCAAGGAGAAGTAATGGAC--AGTTCCT-----------ACTTA---GTTAATACGAGCTG---TAGTTTAAGTTGTTGTAA-C----------------------------------GCGTACACAAGAAACCTTGAAGTCCAATCCC--AA------------------------------------------------------------------TACAAT-------------------------------------------------------------TGTTT---CTTCTTTTTGTATACATATTTTCAAATGCTTTTCGTTTCCACATGGCAATTCACATTCACTTGAACACA-------CCATAT-----CCATTAC-----------------------------------------------TGTCTATTTAG-------------------------------TTTTC---ATA--TGA-------TTCGATCACC----------------------------TTATTTATT-----TCCCCT-----TTTGATTTATTCTTCATTTTAGTACAAAGTCATTGACTAACTAAACACTAT--CTGATTGCACGAC------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GCATACACAATGGCCAAGGAGTACCTGTTCGATAAGGAGCCCAAGGAAAAGTAATGCCA-GCCATCCC-----------ACTTA---GTTAATCGTAGCTG---TAGTTATAGTTGTTGTCT-TTTGT-ATA------------------TAAGTCGCTGGCACACA----------------AACCCCAC--ACA-----CAATTCG--------------------------------------------------------------------CAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTCGCTGAATAC---TTATTTC-TCATCA-------------------------------------------ACCCACCGTTTTATG----------------------------TTACTCAC-----CCTTCCCCCAATTTTGAT----TTCTCATTTTAGTTCCAAGCCACTGACTAACTAAAGCTCATTTCTGATTGTGCGGCCACT------TASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGTTCCAAGCCACTGACT........................................2112.0020200000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---TTATTTC-TCATCA-------------------------------------------ACCCACC...........................................................................................................................................2112.0020200000000
....................GTACCTGTTCGATAAGGAGCCCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020200000000
........................CTGTTCGATAAGGAGCCCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCCAAGCCACTGACTAAC.....................................2112.0020200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTAACTAAAGCTCATTT.........................1911.0010100000000
................................................................TCCC-----------ACTTA---GTTAATCGTAGCTG---TA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.........................................................................................................................................................GTCGCTGGCACACA----------------AACCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.........................................................................................................................................................................................................CAATTCG--------------------------------------------------------------------CAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTCGCTGAATAC---T..........................................................................................................................................................................................................2611.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGTTCCAAGCCACTGACT........................................2011.0010100000000
...........................................................................................................................................................................................................ATTCG--------------------------------------------------------------------CAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTCGCTGA..................................................................................................................................................................................................................1911.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTAACTAAAGCTCATTTCTGATT...................2511.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGATTGTGCGGCCACT------TA2211.0010100000000
......ACAATGGCCAAGGAGTACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.....CACAATGGCCAAGGAGTACCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........TGGCCAAGGAGTACCTGTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCATTTCTGATTGTGCGGCCA..........2311.0010000010000
.........................................................................................................................T-TTTGT-ATA------------------TAAGTCGCTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.................................AAGGAGCCCAAGGAAAAGTAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
GCATACACAATGGCCAAGGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATG----------------------------TTACTCAC-----CCTTCCC...................................................................................2111.0010100000000
..........................GTTCGATAAGGAGCCCAAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................T-ATA------------------TAAGTCGCTGGCACACA----------------AACCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010001000000
...................AGTACCTGTTCGATAAGGAGCCCAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000001000
..................................................................................TA---GTTAATCGTAGCTG---TAGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................GAGCCCAAGGAAAAGTAATGCCA-GCCATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTAAAGCTCATTTCTGATTGTGCGGC............2811.0010010000000
..................GAGTACCTGTTCGATAAGGAGCCCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
GCATACACAATGGCCAAGGAGTACCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGACTAACTAAAGCTCATTTCTGATT...................2911.0010010000000
...........GGCCAAGGAGTACCTGTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......ACAATGGCCAAGGAGTACCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................AGTACCTGTTCGATAAGGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................TGTTCGATAAGGAGCCCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
......ACAATGGCCAAGGAGTACCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
...........................................AGGAAAAGTAATGCCA-GCCAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.................................................................................................GCTG---TAGTTATAGTTGTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
................AGGAGTACCTGTTCGATAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
.......................................................................................GTTAATCGTAGCTG---TAGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGCTCATTTCTGATTGTGC...............2311.0010010000000
.CATACACAATGGCCAAGGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........TGGCCAAGGAGTACCTGTTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................AATCGTAGCTG---TAGTTATAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCACTGACTAACTAAAGCT..............................2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTTCTGATTGTGCGGCC...........2011.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGACTAACTAAAGCTCATTTCTGATT...................2711.0010000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTCTGATTGTGCGGCC...........1911.0010100000000
...................................................................................................TG---TAGTTATAGTTGTTGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......................ACCTGTTCGATAAGGAGCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGATTGTGCGGCCACT------T.2111.0010100000000
..................................................................................TA---GTTAATCGTAGCTG---TAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..............................................................................................................................................................................................C--ACA-----CAATTCG--------------------------------------------------------------------CAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTCGCT....................................................................................................................................................................................................................2311.0010100000000
..........................................AAGGAAAAGTAATGCCA-GCCATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...............................ATAAGGAGCCCAAGGAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
GCATACACAATGGCCAAGGAGTACCTGTTCGATAAGGAGCCCAAGGAAAAGTAATGCCA-GCCATCCC-----------ACTTA---GTTAATCGTAGCTG---TAGTTATAGTTGTTGTCT-TTTGT-ATA------------------TAAGTCGCTGGCACACA----------------AACCCCAC--ACA-----CAATTCG--------------------------------------------------------------------CAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTCGCTGAATAC---TTATTTC-TCATCA-------------------------------------------ACCCACCGTTTTATG----------------------------TTACTCAC-----CCTTCCCCCAATTTTGAT----TTCTCATTTTAGTTCCAAGCCACTGACTAACTAAAGCTCATTTCTGATTGTGCGGCCACT------TASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATTTCTGATTGTGCGGC............20110.00101000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTCTGATTGTGCGGC............1814.004400000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCATTTCTGATTGTGCGGCC...........2214.004400000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATTTCTGATTGTGCGGG............2012.002200000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTCTGATTGTGCGGCCACT------T.2312.002200000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTAAAGCTCATTTCTGATTGTGCGGC............2812.002200000
...................................................................................A---GTTAATCGTAGCTG---TAGTTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
...............AAGGAGTACCTGTTCGATAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCATTTCTGATTGTGCGGCCA..........2411.001100000
.........ATGGCCAAGGAGTACCTGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.................................................................................................................................................................................................ACA-----CAATTCG--------------------------------------------------------------------CAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTCGC.....................................................................................................................................................................................................................2111.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTGATTGTGCGGCCACT------..2111.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGCTCATTTCTGATTGTGCGGC............2511.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTTCTGATTGTGCGGCC...........2011.001100000
.................................................................................................GCTG---TAGTTATAGTTGTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGTTTTATG----------------------------TTACTCAC-----CCT.......................................................................................2311.001010000
....................GTACCTGTTCGATAAGGAGCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTCTGATTGTGCGGCCACT------..2211.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCATTTCTGATTGTGCGGCCACT------..2511.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCACTGACTAACTAAAGCTC.............................2211.001100000
.......................CCTGTTCGATAAGGAGCCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTGATTGTGCGGCCA..........1911.001100000
.................................................................................................GCTG---TAGTTATAGTTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGCTGAATAC---TTATTTC-TC.................................................................................................................................................................................................2211.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCTGAATAC---TTATTTC-TCATC..............................................................................................................................................................................................2411.001100000
....................GTACCTGTTCGATAAGGAGCCCAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
..................GAGTACCTGTTCGATAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAACTAAAGCTCATTTCT.......................1911.001001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTGATTGTGCGGCC...........1811.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCATTTCTGATTGTGC...............1811.001100000
droWil2
GCCTATACGATGGCCAAGGAATATCTCTTCGACAAGCAGCCCAAGGAAAAGTAATGCCTAAAGTTCC------------ACC---------------GATA---TAGTTTTAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............AAGGAATATCTCTTCGACAAGCAGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00211000
.........ATGGCCAAGGAATATCTCTTCGACAAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
.............................CGACAAGCAGCCCAAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100
.....................................AGCCCAAGGAAAAGTAATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
..CTATACGATGGCCAAGGAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...........................................................AAAGTTCC------------ACC---------------GATA---TAGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
....................ATATCTCTTCGACAAGCAGCCCAAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000
..CTATACGATGGCCAAGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
................................CAAGCAGCCCAAGGAAAAGTAATGCCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
.....................................AGCCCAAGGAAAAGTAATGCCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
droVir3
GGATATCAAATGGCTAAGGAGTATCTGTTTGACAAGGCGCCCAAAGAAAAGTAATGCTC--GCTTCTT-CGTA--TA--ATTTA---TTTAAATGTAGCTG---TAT------ATGTTATT---TAGT-GTA------------------ATTGTTGTTGGATTATCAGACACTACGCAG----------------------A---------------------------------------------------------------------------------------------GCTCATTTATTGTATTTGCCATTATTTAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------AATTTCATTTTTATTTTAGTTTGAAGTCTTTGACTAATTAATACAAAT--TTGATTG------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................TTGTTGGATTATCAGACACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002020000000000000000000000000000000000000000000000000000000000000
..............................GACAAGGCGCCCAAAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000000000000001000000000000000010000000000000000000000000000
....ATCAAATGGCTAAGGAGTATCTGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000001010
..................GAGTATCTGTTTGACAAGGCGCCCAAAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.001000000000000000000000000000000000000000000000000000000001000000
.....................................................................................................................................................................................................................................................................................................................ATTTGCCATTATTTAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------AATTT......................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................TGGATTATCAGACACTACGCAG----------------------A---------------------------------------------------------------------------------------------GCTC.............................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
......CAAATGGCTAAGGAGTATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000001000000000000000000000000000
....................................................................................................................................................................ATCAGACACTACGCAG----------------------A---------------------------------------------------------------------------------------------GCTCATTT.........................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................G---TAT------ATGTTATT---TAGT-GTA------------------AT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................TTGTTGTTGGATTATCAGACACTACGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................T---TAGT-GTA------------------ATTGTTGTTGGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................TTGGATTATCAGACACTACGCAG----------------------A---------------------------------------------------------------------------------------------CG...............................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAGTCTTTGACTAATTA...................................2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................AT------ATGTTATT---TAGT-GTA------------------ATTGTTGTTGGATTATCAGACACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................4111.001000000000000000000000000000000000000000000000000000000000100000
......CAAATGGCTAAGGAGTAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................CGCAG----------------------A---------------------------------------------------------------------------------------------GCTCATTTATTGTATTTGCC.............................................................................................................................................................................................................................................................................................................................................................................2611.001010000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TGTTGGATTATCAGACACTACGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................GATTATCAGACACTACGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...............................................AAAGTAATGCTC--GCTTCTT-CGTA--TA--ATTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
.................................................AGTAATGCTC--GCTTCTT-CGTA--T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
....ATCAAATGGCTAAGGAGTATCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................ATCAGACACTACGCAG----------------------A---------------------------------------------------------------------------------------------GCTC.............................................................................................................................................................................................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................ATTGTTGTTGGATTATCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
.....................TATCTGTTTGACAAGGCGCCCAAAGAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...............AAGGAGTATCTGTTTGACAAGGCGCCCAAAGAAAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3611.001000000000000000000000000000000000000000000000000000000010000000
.................................................................................................................................GTA------------------ATTGTTGTTGGATTATCAGACACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
........AATGGCTAAGGAGTATCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
..............TAAGGAGTATCTGTTTGACAAGGCGCCCAAAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3411.001000000000000000000000000000000000000000000000000000000000100000
...................AGTATCTGTTTGACAAGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..........................GTTTGACAAGGCGCCCAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000010000000000000000000000000000
..............TAAGGAGTATCTGTTTGACAAGGCGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
......................ATCTGTTTGACAAGGCGCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....ATCAAATGGCTAAGGAGTATCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTATTTTAGTTTGAAGTCTTTG...........................................2511.001001000000000000000000000000000000000000000000000000000000000000
.GATATCAAATGGCTAAGGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
......................................................................................................................ATT---TAGT-GTA------------------ATTGTTGTTGGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................TGTTATT---TAGT-GTA------------------ATTGTTGTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000100
.........ATGGCTAAGGAGTATCTGTTTGACAAGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000010000
...................................................................................................................................A------------------ATTGTTGTTGGATTATCAGACACT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
....ATCAAATGGCTAAGGAGTAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000001000000000000000000000000000000
...........................................................................................AATGTAGCTG---TAT------ATGTTATT---.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGTCTTTGACTAATTAATACA..............................2411.001000000000000000000000000000000000001000000000000000000000000000
...................................................TAATGCTC--GCTTCTT-CGTA--..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAGTCTTTGACTAAGA....................................1930.331000000000000010000000000000000000000000000000000000000000000000
droMoj3
GGCTATCAGATGGCCAAGGAGTATCTGTTCGACAAGAAGCCCAAGGAGAAGTAATGCTT--CATTCTATATTAACTTTCACTTAAATGTTAAATGTAGTT-TTGTAAT------TGTAATC---TAGTTG-AATTGTTGGATT-ATCAG---------ATGCGCCCCGAGAATCGCGAATT---ATCTC--A--------------------------------------------------------------------------------------------------------GCTAACTCTATATATTTGTCATTATTTAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAT----ATTTCATTTTTATTTTAGTTTGAAGTCTTTACATAATTAATACACAT--TTGATTGAATTG-------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................C---TAGTTG-AATTGTTGGATT-ATCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAAGTCTTTACATAATTA...................................2111.001100000
......................................................................................................................................TGTTGGATT-ATCAG---------ATGCGCCCCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
....................GTATCTGTTCGACAAGAAGCCCAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
....................................................AATGCTT--CATTCTATATTAACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
................................................................................................................................................................................GAATT---ATCTC--A--------------------------------------------------------------------------------------------------------GCTAACTCTATATATT.................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTATTTTAGTTTGAAGTCTTTACA.........................................2611.001000001
....................GTATCTGTTCGACAAGAAGCCCAAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
..................GAGTATCTGTTCGACAAGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.......................................................................................GTTAAATGTAGTT-TTGTAAT------T......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
GGCTATCAAATGGCCAAGGAGTATCTTTTCGAAAAGGAGCCGAAGGAAAAGTAATGCCT--ACTCCTT-ACTAACTT--ATGTA---GTTCAATTTAGCCG---TATTTGT------ACTT---TAATTGTAATTGCTGTCCAAATCATACACA----T----CACACGAAAGGCG-----------------------------------------------------------------------------------------------------------TTCTCTTTTAATAGCTGCTGTTTTGTGTTTGACTTTATTTAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-ATTTT----CATTTTGTATTTTAGTGTGAAGTCATTGACTAATTAATGC-------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................................................................................................................................................................................................................TGCTGTTTTGTGTTTGACT............................................................................................................................................................................................................................................................................................................................................................................1911.00101
...................................................................................................................................................ATACACA----T----CACACGAAAGGCG-----------------------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................2111.00101
droAna3
GCCTATTCGATGACCAAGGAGTACATATTCGACAAGGCTCCCAAGGAGAAGTAATGACG--CGTTCCT-----------ACTTA---GTTAGCTCTAGCA-TAGTAGTCGTAATTGTTCTCT---TGT-ATC-TTG--------------TAAGTCCTTCGCACACAAGACAGTCCAAATTCTGATATC--TACCACCTCCTAATTC-C-----------------------------------------------CGGAAATAT-------------------------------------------------------------TGTTT---TATTTT---TTACA----TTGC------------------------------------------------------------------------------------------------TTAAGTTGTGTGTCGTCCACCAC---T-ATTTC---ATTGCCAATTTCC----------------TTGTT---GTA--CAA-------C----TCATT----------------------------TCACGTATT---------CT-----CTTTATTTTATTTTTATTTTAGCCCCAAATCCCTGACTAACTAAC--TCGA--TTGAATGTTCGGACTCTC-------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAACTAAC--TCGA--TTGAATGTTCG..............2412.002000011
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTAACTAAC--TCGA--TTGAATGTTCG..............2612.002000020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC--TCGA--TTGAATGTTCGGACT..........2211.001010000
..............................GACAAGGCTCCCAAGGAGAAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTAAC--TCGA--TTGAATGTTCGGACT..........2711.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTCC----------------TTGTT---GTA--CAA-------C----TC......................................................................................................................................2111.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAC--TCGA--TTGAATGTTC...............1911.001001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--TCGA--TTGAATGTTCGGACT..........2011.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTAACTAAC--TCGA--TTGAATGTTC...............2511.001100000
.......CGATGACCAAGGAGTACAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.....................TACATATTCGACAAGGCTCCCAAGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
..........TGACCAAGGAGTACATATTCGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAC--TCGA--TTGAATGTTCGG.............2011.001000010
..CTATTCGATGACCAAGGAGTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
....................GTACATATTCGACAAGGCTCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAACTAAC--TCGA--TTGAATGTT................2211.001010000
..................................................................................TA---GTTAGCTCTAGCA-TAGTAGTCGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
....ATTCGATGACCAAGGAGTACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
....................GTACATATTCGACAAGGCTCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..........................................AAGGAGAAGTAATGACG--CG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droBip1
GCCTATTCGATGGCCAAGGAGTACATATTCGACAAGGCTCCCAAGGAAAAGTAATGACG--CGTTCCT-----------ACTTA---GTTAAATCTAGCAGTAGTAGTCGTAATTGTTGTAT-CTTG-----------------------TAAGTCCTTCGCACACAAGAAAGTCGAGATCCTAATATG--TACCA-------CCCC-C-----------------------------------------------TAAT---AA-------------------------------------------------------------TGTTTTGCTTTAATTATTTTTA----TTTCC---------------------------------------------------------------------------------------------------------------------------------TTGCCA-------------------------------------------ACGAAACAGTTTGTGTGACTTCCCATCTGATGTACAATTCATTTTACCTATT--------CCT-----TTTATTTTTATTTTTATTTTAGCCCCAAATCCCTGACTAACTAAAAC--GA--TTGAATGTTCGG-------------SizeHit CountTotal NormTotal
No Reads
droKik1
GCCTACAGTATGGCTAAGGAGTACCTCTTCGAAAAGGCGCCCAAGGAGAAGTAAGGACTCGAGTTCCT-----------ACTTA---GTTAATACTAGCTG---TAGTTGTAGTTGATGTCA-CTCG-----------------------TAAGTCGTTCGCACACAAGAGACCTCGAA-CCCAATCCT--AATTC-----GAATCT-------------------------------------------------TAA----TT-------------------------------------------------------------TGTTT---ATTCGATTTCTATT-TTATTTTAAA---CTTTTTGT-------------------------------------C--TTATTTTACGAAAA----------------------------------------CAGTTGAA---TATTTATTTAA-------------------------------TCATC---ACC--C---------TTTTATTATC----------------------------ATTTTTATCTCACATTTAC-------CTGATTTTTGTTTCATTTTAGTACCAAGTCACTGACTAACTAAA-CTCAT--ATGATTGTAAGACCTCCCTCTTCAASizeHit CountTotal NormTotal
No Reads
droFic1
GCCTACAGCATGGCCAAGGAGTACCTGTTCGACAAGGCGCCCAAGGAAAAGTAATGCTC--AGTTCCT-----------ACTTA---GTTAATACTAGTTG---TAGGTTAAATTGTTGTCT-C----------------------------------ACGAACACAAAACACTTCGAATCCTTATCAA--AATA-----------T----------TTGTAATATTTGTTTTTTA---AAAACACATGCCCTTA-----AAATATGTTTTATGTGTAATTTATAC-------------------------------------------------------------------------------------------------------------------------AT------------------------------------------------------------ACTTAATATTT------------------GCTTTATTATATAATTTATTTGTCTCATTGTATTATCCCTAATTGGTTTATA----------------------------TCACCTAAT-----CCCCCT-----TTTGATTTATTTTTCATTGTAGTGCAAAGTCATTGACTAACTAAAAATCAT--CT-----------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GCCTACAGCATGGCCAAGGAGTACCTATTCGACAAGGCGCCCAAGGAAAAGTAATACCC--AGTTCCT-----------ACATA---GTTAATGCTAGCTG---TACTTATAGTTGTTGTCT-C----------------------------------TCGTACACAAGAAACCTCGAATCCCAATCAT--AATCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GCCTACAGCATGGCCAAGGAGTACCTATTCGACAAGGCGCCCAAGGAAAAGTAATGCCC--AGTTCCT-----------ACTTA---GTTAATACTAGCTG---TACTTCTAGTTGTTGTCT-C----------------------------------TCGTACGCAAGAATCCTCGAATCTGAATCAT--AA-----------TCC-C-----------------------------------------------TAA-AAAAT-------------------------------------------------------------TGTTT---A-------GTTTTA----TTTCCAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAAGCCTTATG----------------------------TTTCTCA------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GCCTACAGCATGGCCAAGGAGTACCTGTTCGACAAGGCGCCCAAGGAGAAGTAATGGCC--AGTTCCT-----------ACTTA---GTTAATACTAGCTG---TAGTTATAGTTGTTGTCA-C----------------------------------TCGTACACGAA---GCTCCAAGCCCAATCCC--AAG---------------------------------------------------------CTTC-----ACACTTGTCTAATTCGAAATTTGTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCCTACTGTTTATTTAT-------------------------------TTACC---TTG--TGTTCCCCTATTGGTTTATT----------------------------TCACTTAC-------CCCCC-----TTTGGTTTATTCTTTATTTTAGTACAAAGTCACTGAATAACTAAAGCTCAT--CTGATTGTATGGCCTCCC-------SizeHit CountTotal NormTotal
No Reads
droTak1
GCCTACAGCATGGCCAAGGAGTACCTGTTCGACAAGGCGCCCAAGGAGAAGTAATGGCC--AGTTCCT-----------ACTTA---GTTAATACTAGACG---TAGTTTTAGTTGTTGTCG-C----------------------------------TCGTACACAAGAAATACCGCAGCCCAATCCCATAATCC--TTTTAATCTG--------------------------------------------------------------------AAAT---------------------------------------------------------------------------------------------------------------------------------------A-----TCATAGTTGTCTATTTATTGTTAATGGTTACTTAAATTATCGAT----------TATCTATTTAT-------------------------------TTATT---TTG--TAATCCCCAATTGGTTTCTT----------------------------CCACTTATC-----CCCCCT-----TTTCATTTATTCTTCATTTTAGTACAAAGTCGTTGACTAACTAAAGATCAT--TTGATTGTACGGCCTCCC-------SizeHit CountTotal NormTotal
No Reads
droEug1
GCCTACAGTATGGCGAAGGAATACTTGTTCGACAAGGCGCCTAAGGAAAAGTAATGGGC--AGTTCCT-----------ACTTA---GTTAATGCTAGTTG---TAGTTTTAGATG---TCA-T----------------------------------TCGTACACAAAAATCC--GAAAACCAATCG-------------ATATCC-CAAATATGCTTGTAA-ACTAGTTATATTCCCATA--TCAATCTCTTC-----ATATTTGTATATTTTGAACTTTATAC-------------------------------------------------------------------------------------------------------------------------CTACCTTAA-----CCGTTAT-----------------------------------------------TTTATATTTAT-------------------------------TTATC---TGT--TGATCCCTTATTGGTTTATC----------------------------TTACTTATT-----CCCCCT-----TTTGATTTGTTCTTCGTTTTAGTACAAAGTCATTGACTAACTAAA--CCAT--TTGATTGTACGGCATCCCTCTCTAASizeHit CountTotal NormTotal
No Reads
dm3
GCCTACAGCATGGCCAAGGAGTACCTGTTCGACAAGGCGCCCAAGGAAAAGTAATGGAC--AGTTCCT-----------ACTTA---GTTAATACTAGCTG---TAGCTTAAGTTGTTTTAACC----------------------------------GCGTACAGAAAGAATCCTGAATCCCAATCCC--AATTG-----A-ATCC-C-----------------------------------------------CAATACAAT-------------------------------------------------------------TGTTT---CATATTTATGTCTA----TTTCCAAATGCTTTCGGTTTCCACATGTCTATTAACATTCACTGAAACGCATATTC--CCATAT-----TCATGAC-----------------------------------------------TGTCTATTTAG-------------------------------TTTTC---ATA--CGT-------TTTGAT--------------------------------TTATTTATT-----TCCCCT--A--TTTGATTTACTCTTAATTTTAGCACAAAGTCATTGACTAACTAAAGACCAT--CTGATTGCTCGGC------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........TGGCCAAGGAGTACCTGTTCGACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000105000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
...............................ACAAGGCGCCCAAGGAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.......................................................................................................................................................................................................................................................................AT-------------------------------------------------------------TGTTT---CATATTTATGTC...............................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.................................................................................................................................................................................AATCCCAATCCC--AATTG-----A-ATCC-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.........................TGTTCGACAAGGCGCCCAAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TGCTTTCGGTTTCCACATGTCT...........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
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.................................................................................................................................................................................AATCCCAATCCC--AATTG-----A-ATCC-C-----------------------------------------------CA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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................AGGAGTACCTGTTCGACAAGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGTCATTGACTAACT....................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..................................................GTAATGGAC--AGTTCCT-----------ACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
GGCTACAGCATGGCCAAGGAGTACCTGTTCGACAAGGCGCCCAAGGAGAAGTAATGCCC--AGTTCCT-----------ACTTA---GTTAATACTAGCTG---TAGCTTAAGTTGTTGTAA-C----------------------------------GCGTACACAAGGAATCCTGAATCCCAATCCC--AATTG-----AAATCC-C-----------------------------------------------CAATACAAT-------------------------------------------------------------TGTTT---CATAATTATGTCTA----TTACCAAATGCTTTCGGTTTCCACGTGTCTATTAACATTCACTCAAACGCATATTC--CCATTT-----TCATGAC-----------------------------------------------TGTCTATTTAG-------------------------------TTTTC---ATA--CGT-------TTGGATTACC----------------------------TTATTTATT-----TACCCT-----TTTGATTTAATCTTCATTTTAGTACAAAGTCATTGACTAACTAAAGACCAT--CTGATTGCTCGGC------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTAAAGACCAT--CTGATTGCTCGGC------------26111.001108300000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTAAAGACCAT--CTGATTGCTCGGC------------2716.00601210010010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAT--CTGATTGCTCGGC------------1916.00614100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGACCAT--CTGATTGCTCGGC------------2112.00200100000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAACTAAAGACCAT--CTGATTGCTCGGC------------2812.00202000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAT--CTGATTGCTCGGC------------1812.00200200000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGACCAT--CTGATTGCTCGGC------------2412.00202000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCAT--CTGATTGCTCGGC------------2011.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTAACTAAAGACCAT--CTGAT....................2411.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAG-------------------------------TTTTC---ATA--CGT-------TTGGATTACC----------------------------.......................................................................................................2511.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACTAACTAAAGACCAT--CTGATTGC.................2711.00100000000100000000
...........................................................................................................................C----------------------------------GCGTACACAAGGAATCCTGAATCCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
.............CCAAGGAGTACCTGTTCGACAAGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
..................................................................................................................................................................ACACAAGGAATCCTGAATCCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
..........TGGCCAAGGAGTACCTGTTCGACAAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................................ATTAACATTCACTCAAACGCATATT..................................................................................................................................................................................................................................................................................2511.00100000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGACCAT--CTGATTGCTCGG.............2111.00100000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAAAGACCAT--CTGATTGCTCGGC------------2511.00101000000000000000
droSec2
GGCTACAGCATGGCCAAGGAGTACCTGTTCGACAAGGCGCCCAAGGAGAAGTAACGCCC--AGTTCCT-----------ACTTA---GTTAATACTAGCTG---TAGTTTAAGTTGTTGTAA-C----------------------------------GCGTACACAAGGAATCCTGAATCCCAATCCC--AATTG-----AAATCC-C-----------------------------------------------CAATACAAT-------------------------------------------------------------TGTTT---CATAATTATGTCTA----TTTCCAAATGCTTTCGGTTTCCACATGTCTATTAACTTTCACTCAAACGCATATTC--CCATTT-----TCATGAC-----------------------------------------------TGTCTATTTAG-------------------------------TTTTC---ATA--CGT-------TTGGATTACC----------------------------TTATTTATT-----TACCCT-----TTTGATTTAATCTTCATTTTAGTACAAAGTCATTGACTAACTAAAGACCAT--CTGATTGCTCGGC------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCAT--CTGATTGCTCGGC------------2015.0050050
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGACCAT--CTGATTGCTCGGC------------2214.0040040
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAT--CTGATTGCTCGGC------------1913.0030030
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTAAAGACCAT--CTGATTGCTCGGC------------2613.0031020
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGACCAT--CTGATTGCTCGGC------------2412.0020020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTAAAGACCAT--CTGATTGCTCGGC------------2712.0020020
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGACCAT--CTGATTGCTCGGC------------2112.0020020
......AGCATGGCCAAGGAGTACCTGTTCGACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100
.......................................................................................................................................................................................................................................................................AT-------------------------------------------------------------TGTTT---CATAATTATGTCT..............................................................................................................................................................................................................................................................................................................................................2011.0010010
........................................................................................................................................................................................................................................................................................................................................................................TGCTTTCGGTTTCCACATGTCTATTA.......................................................................................................................................................................................................................................................................................................2611.0011000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAAAGACCAT--CTGATT...................1811.0011000
....................GTACCTGTTCGACAAGGCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
................................................................................................................GTTGTTGTAA-C----------------------------------GCGTACACAAGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGACCAT--CTGATTGCTCGG.............2111.0011000
.................................................................................................................................................................................................................................................................AATACAAT-------------------------------------------------------------TGTTT---CATAATTATGTCT..............................................................................................................................................................................................................................................................................................................................................2611.0010010
...........................................................................................................................C----------------------------------GCGTACACAAGGAATCCTGAATCCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
..........TGGCCAAGGAGTACCTGTTCGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
........................................................................................................................................................................GGAATCCTGAATCCCAATCCC--AAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
...............................................................................................................................................................................................................................................................................................................................................................................................................CGCATATTC--CCATTT-----TCATGAC-----------------------------------------------T.............................................................................................................................................................................................................2311.0010010
...........................TTCGACAAGGCGCCCAAGGAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
......................................................................................................................................................................................................................................................................................................................................................TGTCTA----TTTCCAAATGCTTTCGG........................................................................................................................................................................................................................................................................................................................2311.0010010
.........ATGGCCAAGGAGTACCTGTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010010
........CATGGCCAAGGAGTACCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010010
droYak3
GCCTACAGCATGGCCAAGGAGTACCTGTTCGACAAGGCGCCCAAGGAGAAGTAATGGAC--AGTTCCT-----------ACTTA---GTTAATACGAGCTG---TAGTTTAAGTGGTTGTAA-C----------------------------------GCGTACACAAGAAACCTGGAAGCCCAATCCC--AACTC-----A-ATC--------------------------------------------TCTCCTCAACACAAT-------------------------------------------------------------TGTTG---CTTCTTGATTTATA----TTTCCAAATGGTTTCGGTTTCCACATGTCTTTTTAAATTCACTTGAACGCA-------CCATAT-----CCATTTT-----------------------------------------------TGTCTATTTAG-------------------------------TTTCA---ATA--TGA-------TTTGATCACC----------------------------TTATTTATT-----TACCCT-----TTTGGTTTATTCTTCATTTTAGTACAAAGTCATTGACTAACTAAAGATCAT--CTGATTGCACGGC------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................TGTTCGACAAGGCGCCCAAGGAGAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000000002
..CTACAGCATGGCCAAGGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200000020000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTAAAGATCAT--CTGATTGCACGGC------------2612.00201000010000
.......................................................................................................................................................................................................................................................................................................................................................................ATGGTTTCGGTTTCCACATGTCT...........................................................................................................................................................................................................................................................................................................2311.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATCAT--CTGATTGCACGGC------------2211.00110000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTAACTAAAGATCAT--CTGAT....................2211.00101000000000
....................GTACCTGTTCGACAAGGCGCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................AAATGGTTTCGGTTTCCACATGTC............................................................................................................................................................................................................................................................................................................2411.00100000010000
...............AAGGAGTACCTGTTCGACAAGGCGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
.................GGAGTACCTGTTCGACAAGGCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCAT--CTGATTGCACGGC------------2011.00101000000000
.................GGAGTACCTGTTCGACAAGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.................................................................................................GCTG---TAGTTTAAGTGGTTGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...........GGCCAAGGAGTACCTGTTCGACAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000100000
..................GAGTACCTGTTCGACAAGGCGCCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
..................GAGTACCTGTTCGACAAGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTAAAGATCAT--CTGATTGCACG..............2411.00101000000000
.....................TACCTGTTCGACAAGGCGCCCAAGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
................................................................................................................GTGGTTGTAA-C----------------------------------GCGTACACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGATCAT--CTGATTGCACGGC------------2411.00100100000000
.....CAGCATGGCCAAGGAGTACCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...TACAGCATGGCCAAGGAGTACCTGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
..................GAGTACCTGTTCGACAAGGCGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAAAGATCAT--CTGATTGCACGGC------------2511.00101000000000
...............................................................................................................AGTGGTTGTAA-C----------------------------------GCGTACACAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..................GAGTACCTGTTCGACAAGGCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000100000
...........................TTCGACAAGGCGCCCAAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
droEre2
GCCTACAGCATGGCCAAGGAGTACCTGTTCGACAAGGCGCCCAAGGAGAAGTAATGGAC--AGTTCCT-----------ACTTA---GTTAATACGAGCTG---TAGTTTAAGTTGTTGTAA-C----------------------------------GCGTACACAAGAAACCTTGAAGTCCAATCCC--AA------------------------------------------------------------------TACAAT-------------------------------------------------------------TGTTT---CTTCTTTTTGTATACATATTTTCAAATGCTTTTCGTTTCCACATGGCAATTCACATTCACTTGAACACA-------CCATAT-----CCATTAC-----------------------------------------------TGTCTATTTAG-------------------------------TTTTC---ATA--TGA-------TTCGATCACC----------------------------TTATTTATT-----TCCCCT-----TTTGATTTATTCTTCATTTTAGTACAAAGTCATTGACTAACTAAACACTAT--CTGATTGCACGAC------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTAAACACTAT--CTGATTGCACGAC------------2612.0020000110
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACTAT--CTGATTGCACGAC------------2112.0020200000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACACTAT--CTGATTGCACGAC------------2311.0010000100
..CTACAGCATGGCCAAGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
......AGCATGGCCAAGGAGTACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
..........TGGCCAAGGAGTACCTGTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
..................................................................................................................................................................ACACAAGAAACCTTGAAGTCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
........................................................................................................................................................................GAAACCTTGAAGTCCAATCCC--AA------------------------------------------------------------------TA....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
..CTACAGCATGGCCAAGGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
...........................TTCGACAAGGCGCCCAAGGAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
.........ATGGCCAAGGAGTACCTGTTCGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
...TACAGCATGGCCAAGGAGTACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100

Generated: 05/17/2015 at 11:26 PM