ID:

dps_830

 Coordinate:

2:27230431-27230547 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dpse\GA11186-cds]; exon [dpse_GLEANR_3042:1]

Repeatable elements

NameClassFamilyStrand
(CTG)nSimple_repeatSimple_repeat+

Sense Strand Reads

#########################################################################################################################################################################################################################
GTGTGGCCGCGAAGAACGTGCTTCAGCGCCAGTTGGCCACGACCACCATCGTTCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGATCAGGATTTGGATTTGGACAGCGAACGGGAACGGGAACCGCTACAGAAGTTACCCCTGACTTTGGAGGCGTCGTGCGAGCCACCCAACGAACTGAC
**************************************************(((((((.((.((.((.((.((.((.((.((.((....)).)).)).)).)).)).)).)).)).))..((((........)))))))))((((..((....)).....))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM444067
head
 V112
male body		 M040
female body
........................................................................................................................................GGACAGCGAACTGGAAAGG.............................................................. 19 2 8 0.13 1 1 0 0
.....................................................................................................................................................................................TGTGGAGACGTCGGGCGAGC................ 20 3 11 0.09 1 0 1 0
..................................................GTTCACCCGCATCAGCAGCT................................................................................................................................................... 20 3 15 0.07 1 0 0 1
.....................................................................................................................................................................AGAAGTTACCGATCACTTT................................. 19 3 18 0.06 1 1 0 0

Anti-sense strand reads

CACACCGGCGCTTCTTGCACGAAGTCGCGGTCAACCGGTGCTGGTGGTAGCAAGTGGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCCTCCTAGTCCTAAACCTAAACCTGTCGCTTGCCCTTGCCCTTGGCGATGTCTTCAATGGGGACTGAAACCTCCGCAGCACGCTCGGTGGGTTGCTTGACTG
**************************************************(((((((.((.((.((.((.((.((.((.((.((....)).)).)).)).)).)).)).)).)).))..((((........)))))))))((((..((....)).....))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
..................................................CAAGTGTTCGTTGTCGTCGTCG................................................................................................................................................. 22 2 8 0.25 2 2 0
................GCAGGAGGTCGCGGTCAA....................................................................................................................................................................................... 18 2 14 0.07 1 0 1
...............................................................TCGTCGTCGTCGTCGTCGTCGT.................................................................................................................................... 22 0 20 0.05 1 1 0
.....................................................................TCGTCGTCGTCGTCGTCGTCGT.............................................................................................................................. 22 0 20 0.05 1 1 0
........................................................GTCGTCGTCGTCGTCGTCGTCGT.......................................................................................................................................... 23 0 20 0.05 1 1 0
............................................................TCGTCGTCGTCGTCGTCGTCGT....................................................................................................................................... 22 0 20 0.05 1 1 0
.........................................................TCGTCGTCGTCGTCGTCGTCGT.......................................................................................................................................... 22 0 20 0.05 1 1 0
.................................................................GTCGTCGTCGTCGTCGTCGTCGT................................................................................................................................. 23 0 20 0.05 1 1 0
..............................................................................................................................................................................................CAGGAAGCTCGGAGGGTTGCT...... 21 3 20 0.05 1 1 0
..................................................................TCGTCGTCGTCGTCGTCGTCGT................................................................................................................................. 22 0 20 0.05 1 1 0
........................................................................TCGTCGTCGTCGTCGTCGTCGT........................................................................................................................... 22 0 20 0.05 1 1 0
..................................................CAAGTGTTCGTTGTCGTCG.................................................................................................................................................... 19 2 20 0.05 1 1 0
...........................................................GTCGTCGTCGTCGTCGTCGTCGT....................................................................................................................................... 23 0 20 0.05 1 1 0
..............................................................GTCGTCGTCGTCGTCGTCGTCGT.................................................................................................................................... 23 0 20 0.05 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:27230381-27230597 - dps_830 GTGTGGCCGCGAAGAACGTG------------------------------------------------------------------CTTCAGC----------------GCC---------------------------------------------------AGTTGGCCACG---ACCACCATCG-T---T-----------CACCAGCAGCAGCA------GCAGCAGCAGCA------GCAGCAGCAGCAGCA------------------------------------------------------GCAG---CAGCAGCA---GCAG------C---------------AGCAGG---AGG---A---------TCAGGA-------TTTGGATTTGGACAGCGAACGGGAACGGGAACCGCTACAGAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA-CCCCTGA------CTTT-------------------------------------------------------------------------GGA----GGCGT-----CGTGC-----GAGCCACCCAACG------------------------------------------AACTGAC
droPer2 scaffold_6:2521233-2521410 - GTGTGGCCGCGAAGAACGTG------------------------------------------------------------------CTTCAGC----------------GCC---------------------------------------------------AGTTGGCCACG---ACCACCATCG-T---T-----------CACCAGCAGCAGCA------GCAGCAG---CA------------GGAGGATCA------------------------------------------------------G------------GA-------------------------------------------------------------------TTTGGATTTGGACAGCGAACGGGAACGGGAACCGCTACAGAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA-CCCCTGA------CTTT-------------------------------------------------------------------------GGA----GGCGT-----CGTGC-----GAGCCACCCAACG------------------------------------------AACTGAC
droWil2 scf2_1100000003104:1995-2189 - GGCCCA----GCAGAAGATG------------------------------------------------------------------TATGAGGGTCAGTGGGCATTGGCGGCAAGA-------GCCCTGC-----CACCAGCAGCAGCAGCAGC-----------------------ACTA-----------C-----------CATCAACATCAGCAGCACCAGCAGCAG------------TAGCAGCAACATCA------------------------------------------------------GCAC---TGCCAGTA---GCAG------CAGCAGG---ACCAGCAGCAGT---AGC---A---------GCAGCAG---CAC----------------------------------------CAGCA-----------------------------------------GCA---GT----------------AGGAGCAACATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGC
droVir3 scaffold_12928:1312752-1312969 + GCGGCA----G------------------CTG---------------CGGCACAT----------CAACAG---------------CAGCAAC----------------AGC---------------------------------------------------AGCAGGCCGCCGCCGCTGTAGTT----GTC--------------CAGCAGCATCAGCAGCAGCAACAG------------CAGCAGCAACATCA------------------------------------------------------GCAG---CAGCAGCA---GCAG------CAGCAGG---TGCAGCAGCAAC---AGC---A---------GCAG------------------------------------------------------------------------------------------CAGCAACAGGCGG------------------CAGCAGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTGTCAAGATGCAGCTGACCGGCGGCACGCCCACATTCA---------------------------------------------------CATTCA----------------------------------------------GC--GC
droMoj3 scaffold_6328:1469754-1469951 + GGCCAC----CAAGGGCAAGCCGCCACAGCCGCCCAAT---CAC--------CAT-CATCACCACCATCAGCAGCTG---------------C----------------AG---------------------------------------------------------------------------------------------CAGCAGCAGCAGCA---------GC---------------------AGCAACA---------------------------------GCAGCAGCAGCTGCAACTACAGCAG---CAGCAGCT---GCAGCAAC------------AGCA---ACTGC---AGCAACA---------GCAGCAGCAA----------------------------------------CAG--------------------------------------------TTGCT---G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-------------------------------------------------------------------------GGA----GCGGC-----AGCGT-----CGGCAAGAGCTGG------------------------------------------AACGGCA
droGri2 scaffold_15203:8413498-8413712 - GCGGCG----G------------------------------------CAGCGCAT----------CATCAG---------------CAACAAC----------------AGC---------------------------------------------------AGCAGGCCGTTGCAGCCGTAGTC----GTA-----------CAGCAGCAGCAGCA---GCAGCAACAA---CA------ACA---GCAGCAACA------------------------------------------------------ACAA---CAACAGCAGCAACAA------------C---------AACAGC---AGC---A---------GCAG------------------------------------------------------------------------------------------CAACAACAGGCAGC---------------GGTGGCAGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTGTAAAAATGCAGCTAACTGGCGGCACGCCCACATTCA---------------------------------------------------CATTCAGCG------------------------------------------CCCTGCC
droAna3 scaffold_13047:1633584-1633809 - GTCTGAGTGCGCTGATCGAGTCGCAGCAG---------------------------------------------------------CAGCACG----------------AGCTGCAGCAACAGG------------------------------------------------------------TTG-T---G-----------CAGCAGCAGCA------GCAACAGCAG------------CA---GCAGCAACA------------------------------ACAGCAGCAGCAGGTGGTGCAGCAGCAGCAA---CAGCA---------------------------------------GCAG----------------------------------------------------------------CAGCAGG--------------------------------------------TGG----------------TGCAGCAACAGCAGCAAATGGGTCTGGGCAATCCGGTGGGAGTGCCCGGTGGCGGGGGCGTCGGAGGAGGTC-------------------------------------------------------------------------------------------------------------------CG----------------------------------------------------------CCAG----------------TGG------------------------------------------CAGTGCC
droBip1 scf7180000396709:95360-95573 - GCGACT----A------------------TGG---------------CAGCGTACGGA-----GTC--------------------CCCAGGA----------------GCC-----------------------------------------------------------------------ACAA-C--AT-----------CACCAGCTGCAGCAGCAGCAACAACAG------------CAGG---CGCAACA---------------------------------------------------------------GCAGCA---GCAG------CAGCACA---ATCA------GCAGCAACAGCA---------ACAG-------------------------------------------------AAT---------ACGTACTACGACTT---------------CAACAGCA---AG----------------TGGAACA------------------CGCCCCTCAAGACGGAAAACAAT----------------------------------------------------------------------------------------GCG-GCGTCGG------TTTCGCCAGCGGC---------------------CACCAT------------------------------------------------------------------------CAACA------------------------------------------TACCCAC
droKik1 scf7180000302277:128368-128566 + CTGCACCCA----GAGCTCT------------------------------------------------------------------TTG--------------------------------------------------------------------------------CCGCC---GCAGCAGCC----ACG--------------CATCAGCAACA---GCGGGAGCAA---CA------GCA---GCAACAACA------------------------------------------------------GGCG---CAGCAGCA------TCAAAGGGAAAGG---------GAAA------GAG---A---------ACGAGAGCGG------------------------------------------------------------------------------------GAAAGGGA---AA----------------GAGAAAGAGAACGG-------------------------------------------------------GAACGGGAG----------------------------------------------------------CAG-CACCTGGGCATTGGC--------------------------------CACCTGCCGCACTCCC----------------------------------------------AT-------------CTAGCT--------------------------------------GCCGATCT-GA
droFic1 scf7180000452523:90977-91201 - TTGCAGCCGCCGCCGC--------------CT--CTGCCTCCGCCAGCGTCTCA---------GCCAACAGCAGCA---------------AC----------------AT---------------------------------------------------------------------------------------------CAACAGCATCAGCAACATCAACAGCAG---CA------AC---AGCAACAACA------------------------------------------------------ACGC---CAGCAGCA---GCAG------CAACACG---AACAACAGC------AACAACA---------ACAGCGG----------------------------------------------CAGCAGT--------------------------------------------CCG----------------AGCAGCAGCAGCA--------------------------------------------------------------------------------------------------------ACCACA---AC--------AGC-AATCTCA------ACCT-------------------------------------------------------------------------GAGCGGCGG-ATCGCTTTCGCC-----GAGCCACT---TG------------------------------------------AGCCAGC
droEle1 scf7180000491173:3909-4119 - GCAGCG----A--------------------------------------------------------TCAG---CAT---------CA---GC----------------AGC---------------------------------------AGCATCAGCATCAG------------------------------------------------------CACCTGCCGCAG---CC------GC---AGCATCATCA------------------------------------------------------GCAC---CAGCAGCG---TCAG------CAACAGC---AACAGCGGC------ATCAGCAGCAGAAGCGGCAGCAG---CAT----------------------------------------CAGCA-----------------------------------TCCTCTAGCAACTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTACGAGACGGCCACATACGGAGATTCCCTCGGTGACTTCGTG----GTCAT-----CTTTG-----GGACCAC-CGACG------------------------------------------CACTGTC
droRho1 scf7180000779588:614666-614885 + GCTACA----G------------------CCT--CAAT------------------------------------------------CT---CC----------------AGCTGCATGC-----------------------------------------------CGTCTACA---ACGACAATCTGATGTA---C-------ATGCAACAGCAGCA---GCAGCAACAG---CA------GCA---GCAGCAACA------------------------------------------------------ACAG---CAACATCACCTGCAA------------C---------ATCAGC---AAC---A---------CCTG------------------------------------------------------------------------------------------CAAC-------------------------------------------------------------------------------------------------------------GCT-GGCTGGATCAGGAGTCTTTGGCCAGCACAAGGACA---ACCACAAG--CCAGCCCCTGA------TCCT----------------------------------TGTGGC----------------------------------------GG-AT-----CCTGC----------GCCCACAA------------------------------------------ACCTGAC
droBia1 scf7180000302126:3397853-3398053 - GTACCAC-------------------------------------------------------------------------------CCGCACC----------------AGCTGCACGCCCACGCC----------------------------------------------------------CTG-C---C--------------CACCAGCAGCA---GCAGCAACAG---CAGCAGCAACAGC---AGCAGCA---------------------------------------------------------------GCAACA---GCA------------------------ACAGC---AGCAG----------------------------------------------------------------CTCCACG---GCGAT-----------CCCGACGACGAG--------------------------------------------------------------------------------------------------------GAGGTGGAGAACGCGCGGCTGGAGCAGGTG--------CGGCGCAAGCAGA---AC--------GCC-CAGCTGA------GCCT-------------------------------------------------------------------------GGT----GGAGT-----CCTTCC----T------------------------------------------------------GACCACC
droTak1 scf7180000415220:64436-64650 - GCAACA----G------------------CAG------------------------------------------CAGCAGCAAATGATGCAGC----------------AGC---------------------------------------------------AGCAGGGCAAG---TCGCCCATGG-A---G-----------CTGCAACAGCAGCA------GCAA------------------------CAACA------------------------------------------------------GCAA---------CA---GATG------CAGCAGGACAACTC---ACAGC---AGCAG----------------------------------------------------------------CAGCACT---ACAATCAGTACCAGCT---------------GAAC-----------ATGCAGATGGGCGGCGGAGGAG-------------------------------------------------------------GTCCAGGCG----------------------------------------------------------GAG-GACCTGGTCCTGGACCA----------------------------------GGCGGCATGCCC----------------------------------------------GG----------CATGCA-----------------------------------------------GCAGA
droEug1 scf7180000409711:2430395-2430610 + ATGCCGCCGCAGCAA--------------------------------------AT---------CCTG------------------CAGCAGC----------------GGC---------------------------------------------------AGTTG-CAGCA---GCAGCTGCC----GCC-----------CAACAGCAGCAGGC---ACAGCAGCAG------------CAGCAGCAACAACA------------------------------------------------------ACAG---------CA---ACAG------CAGCAGG---CCCAGCAACAGC---AGC---A---------GCAA------------------------------------------------------------------------------------------CAACAACAGGTGGC------------CGGCGGAGCAGCACCA-----------------CCCACAGCTGCCGACAGT----------------------------------------------------------------------------------------TTG-TCCATGG------CTGTGGCAGCGGCGGCTGC--------------------------------------------------------------------------------------------AAAACA------------------------------------------AGCTG--
dm3 chrX:9747948-9748154 - GGGTGGTGGCATT------G------------------------------------------------------------------C----------------------GGCAGGT-------GCCTCACTTGACCACAA------------------------------GGCA---GCAGC-TTTG-T-GCTCTACAGGCATTAACAAACAGCAGCA---GCAGCAGCAA---CA------ACA---ACAACAACA------------------------------------------------------ACTG---CAACAACA-------------------------------------------------------------------TTTGCAATCAGTCGCCGAACGGCAGCAATAACAACAACAGCAG---TTTGATGAT-----------GACGATGACGAGCAACCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAA----------CACCAACCG------------------------------------------AGCTGCA
droSim2 x:8497695-8497900 - GAGTTGCAGCAAC----------------------------------------AT----------CAGCAG---------------CAGCAAC----------------AGC---------------------------------------------------AGC---------------------------------------AACGACAGCAGCA------------------------GC---AGCAACATCA------------------------------------------------------ACAG---CAACAGCA---TCAGCAACTGCAGCAG---------CAGC------AAC---A---------GCAGCAGCAA------------------------------------------------------------------------------------CAACAGCA---AC----------------TGAAGCAACAACAT----------------------------------------------------------------------------------------------------------------------------------CAG------CCCGACCAGCAGCAACTGCAG--------------------------------------------------------------------------------------------AAGATCATCACGCTGAAGGATCAGGTGATTGGAGCGCTGACCAGCGAGCTGGC
droSec2 scaffold_0:131726-131941 - GCGTGAATGCATGGGCCTTG------------------------------------------------------------------CAGCAGC----------------AGCAACAAACCGCCGCC----------------------------------------------------------CTG-C--AC--------------CATCAGCAACA------GCAGCAGCAGCAGCATCAACAGC---AGCAACACCAACAGCACCTACAGCAACACCATCAAGCGCACCATCAGCATGTCCTGCAGCAGCAGCAG---CAGCA---------------------------------------AC----------------------------------------------------------------AGCAGCACT--------------------------------------------CCC----------------AGCATCAGCATCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC----AGCAA-----CATCA-----CGGCCACCCGCTG------------------------------------------CATCCGC
droYak3 3L:17743174-17743389 + CCGCCACCGCAGCAACCGGG------------------------------------------------------------------CAGCTTC----------------CGC------------------------------------------------------------CG---GCAACCATCG-T--TG-----------CACCAACAGCAGCA------GCAGCAA---CA---GCAACAGC---AGCAACT------------------------------------------------------TC-------GCGGCA---ACAA------CAACACG---AC-----GCAGC---AGC---A---------GCAG------------------------------------------------------------------------------------------CAACAGCAGGCGGCCTTGCTGATGGGTG---------------------------------------------------------------------------------------------------------GTGGGTCGGTGGGTGGGCCTGCACCGCAGATGATT-CCCCTGG------C--G-------------------------------------------------------------------------GGT----GGCAT-----CCAGC-AGCAGAGCCTCC----------------------------------------------------CA
droEre2 scaffold_4690:4626340-4626538 + GCATCC----GCAGTACCAT------------------------------------------------------------------CCGCACC----------------AGCTGCACGCCCATGCC----------------------------------------------------------CTG-C--CG--------------CATCAGCA------GCAGCAGCAACAGCA------------GCAACAACA------------------------------------------------------GCAG---CAGCAGCA---GCAG----------------------------------------------------------------------------------------------------CTGCACG---GCGAT-----------CCCGACGACGAG--------------------------------------------------------------------------------------------------------GAGGTGGAGAACGCTCGCCTGGAGCAGGTG--------CGTCGCAAGCAGA---AC--------GCC-CAGCTGA------GCCT-------------------------------------------------------------------------GGT----GGAGT-----CCTTC----------------CT------------------------------------------CACCACC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GTGTGGCCGCGAAGAACGTG------------------------------------------------------------------CTTCAGC----------------GCC---------------------------------------------------AGTTGGCCACG---ACCACCATCG-T---T-----------CACCAGCAGCAGCA------GCAGCAGCAGCA------GCAGCAGCAGCAGCA------------------------------------------------------GCAG---CAGCAGCA---GCAG------C---------------AGCAGG---AGG---A---------TCAGGA-------TTTGGATTTGGACAGCGAACGGGAACGGGAACCGCTACAGAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA-CCCCTGA------CTTT-------------------------------------------------------------------------GGA----GGCGT-----CGTGC-----GAGCCACCCAACG------------------------------------------AACTGACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
GTGTGGCCGCGAAGAACGTG------------------------------------------------------------------CTTCAGC----------------GCC---------------------------------------------------AGTTGGCCACG---ACCACCATCG-T---T-----------CACCAGCAGCAGCA------GCAGCAG---CA------------GGAGGATCA------------------------------------------------------G------------GA-------------------------------------------------------------------TTTGGATTTGGACAGCGAACGGGAACGGGAACCGCTACAGAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA-CCCCTGA------CTTT-------------------------------------------------------------------------GGA----GGCGT-----CGTGC-----GAGCCACCCAACG------------------------------------------AACTGACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................A------------------------------------------------------G------------GA-------------------------------------------------------------------TTTGGATTTGGACA...............................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000010
droWil2
GGCCCA----GCAGAAGATG------------------------------------------------------------------TATGAGGGTCAGTGGGCATTGGCGGCAAGA-------GCCCTGC-----CACCAGCAGCAGCAGCAGC-----------------------ACTA-----------C-----------CATCAACATCAGCAGCACCAGCAGCAG------------TAGCAGCAACATCA------------------------------------------------------GCAC---TGCCAGTA---GCAG------CAGCAGG---ACCAGCAGCAGT---AGC---A---------GCAGCAG---CAC----------------------------------------CAGCA-----------------------------------------GCA---GT----------------AGGAGCAACATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................ACATCA------------------------------------------------------GCAC---TGCCAGTA---GCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
..................TG------------------------------------------------------------------TATGAGGGTCAGTGGGCATTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
....................................................................................................................................................................................................................................................................................................................................................AGCAGG---ACCAGCAGCAGT---AGC---A---------GCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
...............AGATG------------------------------------------------------------------TATGAGGGTCAGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
...........CAGAAGATG------------------------------------------------------------------TATGAGGGTCAGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.................................................................................................................AGA-------GCCCTGC-----CACCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
......................................................................................TATGAGGGTCAGTGGGCATTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
...........CAGAAGATG------------------------------------------------------------------TATGAGGGTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
....CA----GCAGAAGATG------------------------------------------------------------------TATGAGGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
................................................................................................................................................................................................................AACATCAGCAGCACCAGCAGCAG------------TA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA-----------------------------------------GCA---GT----------------AGGAGCAACATCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G....2411.00100010
.................................................................................................................................................................................ACTA-----------C-----------CATCAACATCAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
................................................................................................................AAGA-------GCCCTGC-----CACCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
....CA----GCAGAAGATG------------------------------------------------------------------TATGAGGGTCAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
...............................................................................................................CAAGA-------GCCCTGC-----CACCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
................GATG------------------------------------------------------------------TATGAGGGTCAGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
..................................................................................................TGGGCATTGGCGGCAAGA-------GCCCTGC-----C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
......................................................................................TATGAGGGTCAGTGGGCATTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.....A----GCAGAAGATG------------------------------------------------------------------TATGAGGGTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
..............AAGATG------------------------------------------------------------------TATGAGGGTCAGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
........................................................................................TGAGGGTCAGTGGGCATTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
............AGAAGATG------------------------------------------------------------------TATGAGGGTCAGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
............................................................................................................................................................................................................CATCAACATCAGCAGCACCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100010
.....................................................................................................................................................................................................................................................................................................................................................................CAGT---AGC---A---------GCAGCAG---CAC----------------------------------------CAGCA-----------------------------------------GCA---G................................................................................................................................................................................................................................................................................................................................................2720.50101000
.........................................................................................................................................................................................................................................................CAACATCA------------------------------------------------------GCAC---TGCCAGTA---GCAG------T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100010
.....................................................................................................................................................................................................................................................................................................................................................................CAGT---AGC---A---------GCAGCAG---CAC----------------------------------------CAG..................................................................................................................................................................................................................................................................................................................................................................................................2130.33101000
..............................................................................................TCAGTGGGCATTGGCGGCAAGA-------GC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.33101000
..............................................................................................TCAGTGGGCATTGGCGGCAAGA-------G..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.33100010
.....................................................................................................................................................................................................................................AG------------TAGCAGCAACATCA------------------------------------------------------GC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18170.18300030
....................................................................................................................................................................................................................................CAG------------TAGCAGCAACATCA------------------------------------------------------G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18170.12200020
....................................................................................................................................................................................................................................CAG------------TAGCAGCAACATCA------------------------------------------------------GCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20170.12200020
.....................................................................................................................................................................................................................................AG------------TAGCAGCAACATCA------------------------------------------------------GCAC---T.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.11101000
..............................................................................................................................................................................................................................CAGCAGCAG------------TAGCAGCAACATCA------------------------------------------------------G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.10100010
.....................................................................................................................................................................................................................................AG------------TAGCAGCAACATCA------------------------------------------------------GCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19170.06100010
droVir3
GCGGCA----G------------------CTG---------------CGGCACAT----------CAACAG---------------CAGCAAC----------------AGC---------------------------------------------------AGCAGGCCGCCGCCGCTGTAGTT----GTC--------------CAGCAGCATCAGCAGCAGCAACAG------------CAGCAGCAACATCA------------------------------------------------------GCAG---CAGCAGCA---GCAG------CAGCAGG---TGCAGCAGCAAC---AGC---A---------GCAG------------------------------------------------------------------------------------------CAGCAACAGGCGG------------------CAGCAGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTGTCAAGATGCAGCTGACCGGCGGCACGCCCACATTCA---------------------------------------------------CATTCA----------------------------------------------GC--GCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................GCAGGCCGCCGCCGCTGTAGTT----GTC--------------CAGCAGCATCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................4111.001000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................AC---AGC---A---------GCAG------------------------------------------------------------------------------------------CAGCAACAGGCGG------------------CAGC.........................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................GTC--------------CAGCAGCATCAGCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................GTAGTT----GTC--------------CAGCAGCATCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................CAGCAACATCA------------------------------------------------------GCAG---CAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.408105000000000000000000000010000010000000000000000000000000000000
...............................................................................................................................................................................................................................AGCAACAG------------CAGCAGCAACATCA------------------------------------------------------G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................GCAGCAGCAACAG------------CAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.255000000000000000004000000000000000000001000000000000000000000000
..................................................CACAT----------CAACAG---------------CAGCAAC----------------A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.251000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................................GCA---GCAG------CAGCAGG---TGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.251000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................CAGCAACATCA------------------------------------------------------GCAG---CAGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.255000000000000000010000000000000000000002000000000000000000000020
..................................................................................................................................................................................................................CAGCATCAGCAGCAGCAACAG------------CA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2360.171001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................AGCAGCATCAGCAGCAGCAACAG------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2360.171000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CAGCAGCA---GCAG------CAGCAGG---TGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.141001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................GCAGCA---GCAG------CAGCAGG---TGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.131000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................ATCAGCAGCAGCAACAG------------CAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.102001000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................CAGCAGCAACATCA------------------------------------------------------GCAG---C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102001000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................TCAGCAGCAGCAACAG------------CAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102001000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................AACATCA------------------------------------------------------GCAG---CAGCAGCA---.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102000000000000000000000000000000000100100000000000000000000000000
...................................................................................................................................................................................................................................ACAG------------CAGCAGCAACATCA------------------------------------------------------GC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20110.091000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GC---A---------GCAG------------------------------------------------------------------------------------------CAGCAACAGGCG................................................................................................................................................................................................................................................................................................................................................19130.081000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................GCAGCATCAGCAGCAGCAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.061000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CAGCAGCAAC---AGC---A---------GCAG------------------------------------------------------------------------------------------CA..........................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................AGCAGCAACAG------------CAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000010000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................GCAGCAACAG------------CAGCAGCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................CAAC---AGC---A---------GCAG------------------------------------------------------------------------------------------CAGCAACA....................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000001000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................CAACATCA------------------------------------------------------GCAG---CAGCAGCA---.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000001000000000000000000000000000000
......................................................................................................................................................................................................................................................CAGCAACATCA------------------------------------------------------GCAG---CAGCAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................................................................................................................AGCAACAG------------CAGCAGCAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................GCAGCAAC---AGC---A---------GCAG------------------------------------------------------------------------------------------CAGCAACA....................................................................................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAAC---AGC---A---------GCAG------------------------------------------------------------------------------------------CA..........................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................CAACAG------------CAGCAGCAACATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CAGCAAC---AGC---A---------GCAG------------------------------------------------------------------------------------------CAGCA.......................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................................................................................................................AGCAACATCA------------------------------------------------------GCAG---CAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CAG---CAGCAGCA---GCAG------CAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................AGCAAC---AGC---A---------GCAG------------------------------------------------------------------------------------------CAGCAAC.....................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................AG---------------CAGCAAC----------------AGC---------------------------------------------------AGCAGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................AGCAGCAACATCA------------------------------------------------------GCAG---CA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................GCAGCAACATCA------------------------------------------------------GCAG---CAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000010000000000000000000000000
..................................................................AACAG---------------CAGCAAC----------------AGC---------------------------------------------------AGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................ATCA------------------------------------------------------GCAG---CAGCAGCA---GCAG------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................CAGCAGCAACAG------------CAGCAGCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................ACATCA------------------------------------------------------GCAG---CAGCAGCA---GCAG------C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................CATCA------------------------------------------------------GCAG---CAGCAGCA---GCAG------CA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................ATCA------------------------------------------------------GCAG---CAGCAGCA---GCAG------C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................................TGCAGCAGCAAC---AGC---A---------GCAG------------------------------------------------------------------------------------------CA..........................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................TCAGCAGCAGCAACAG------------CAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................CATCA------------------------------------------------------GCAG---CAGCAGCA---GC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000010000000000000000000000000000
droMoj3
GGCCAC----CAAGGGCAAGCCGCCACAGCCGCCCAAT---CAC--------CAT-CATCACCACCATCAGCAGCTG---------------C----------------AG---------------------------------------------------------------------------------------------CAGCAGCAGCAGCA---------GC---------------------AGCAACA---------------------------------GCAGCAGCAGCTGCAACTACAGCAG---CAGCAGCT---GCAGCAAC------------AGCA---ACTGC---AGCAACA---------GCAGCAGCAA----------------------------------------CAG--------------------------------------------TTGCT---G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-------------------------------------------------------------------------GGA----GCGGC-----AGCGT-----CGGCAAGAGCTGG------------------------------------------AACGGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------------------------TTGCT---G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-------------------------------------------------------------------------GGA----GCGGC-----AGCGT-----CGGC..........................................................2611.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------------------------TTGCT---G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-------------------------------------------------------------------------GGA----GCGGC-----AGCGT-----CGGCAA........................................................2811.001100000
..............................................................................................................................................................................................................................................................................................................GCAACTACAGCAG---CAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.201100000
..............................................................................................................................................................................................................GCAGCAGCAGCA---------GC---------------------AGCAACA---------------------------------G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102200000
....................................................................................................................................................................................................................................C---------------------AGCAACA---------------------------------GCAGCAGCAGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
..............................................................................................................................................................................................................GCAGCAGCAGCA---------GC---------------------AGCAACA---------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
........................................................................................................................................................................................................................................................................................................................................................................C---AGCAACA---------GCAGCAGCAA----------------------------------------CAG--------------------------------------------T........................................................................................................................................................................................................................................................................................................................................................22200.051000010
droGri2
GCGGCG----G------------------------------------CAGCGCAT----------CATCAG---------------CAACAAC----------------AGC---------------------------------------------------AGCAGGCCGTTGCAGCCGTAGTC----GTA-----------CAGCAGCAGCAGCA---GCAGCAACAA---CA------ACA---GCAGCAACA------------------------------------------------------ACAA---CAACAGCAGCAACAA------------C---------AACAGC---AGC---A---------GCAG------------------------------------------------------------------------------------------CAACAACAGGCAGC---------------GGTGGCAGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTGTAAAAATGCAGCTAACTGGCGGCACGCCCACATTCA---------------------------------------------------CATTCAGCG------------------------------------------CCCTGCCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................................................................GCA---GCAGCAACAA---CA------ACA---GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05110
.........................................................................................................................................................................................................................................................................................................................................ACAA------------C---------AACAGC---AGC---A---------GCAG------------------------------------------------------------------------------------------CAACA.......................................................................................................................................................................................................................................................................................................................................................24200.05110
droAna3
GTCTGAGTGCGCTGATCGAGTCGCAGCAG---------------------------------------------------------CAGCACG----------------AGCTGCAGCAACAGG------------------------------------------------------------TTG-T---G-----------CAGCAGCAGCA------GCAACAGCAG------------CA---GCAGCAACA------------------------------ACAGCAGCAGCAGGTGGTGCAGCAGCAGCAA---CAGCA---------------------------------------GCAG----------------------------------------------------------------CAGCAGG--------------------------------------------TGG----------------TGCAGCAACAGCAGCAAATGGGTCTGGGCAATCCGGTGGGAGTGCCCGGTGGCGGGGGCGTCGGAGGAGGTC-------------------------------------------------------------------------------------------------------------------CG----------------------------------------------------------CCAG----------------TGG------------------------------------------CAGTGCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................CACG----------------AGCTGCAGCAACAGG------------------------------------------------------------TT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
........................................................................................................................................................................................................................................................................................................GCAGGTGGTGCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.....................CGCAGCAG---------------------------------------------------------CAGCACG----------------AGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGG--------------------------------------------TGG----------------TGCAGCAAC......................................................................................................................................................................................................................................................................................................................1911.001010000
..................................................................................................................CAGCAACAGG------------------------------------------------------------TTG-T---G-----------CAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTCTGGGCAATCCGGTGG........................................................................................................................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................................................................................................................................................................GCAA---CAGCA---------------------------------------GCAG----------------------------------------------------------------CAGCAGG--------------------------------------------T.................................................................................................................................................................................................................................................................................................................................................2160.171100000
.....................................................................................................................................................................................................................CA------GCAACAGCAG------------CA---GCAGCAACA------------------------------ACAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28120.172110000
...............................................................................................................................................................................................................................AACAGCAG------------CA---GCAGCAACA------------------------------AC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153000003
............................................................................................................................................................................................................CAGCAGCAGCA------GCAACAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102020000
......................................................................................................................................................................................................................A------GCAACAGCAG------------CA---GCAGCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102001001
......................................................................................................................................................................................................................A------GCAACAGCAG------------CA---GCAGCAACA------------------------------ACAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27120.081010000
.............................................................................................................................................................................................................................GCAACAGCAG------------CA---GCAGCAACA------------------------------AC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
.....................................................................................................................................................................................................................................AG------------CA---GCAGCAACA------------------------------ACAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000
..............................................................................................................................................................................................................................CAACAGCAG------------CA---GCAGCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000
..........................................................................................................................................................................................................................................................AGCAACA------------------------------ACAGCAGCAGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
....................................................................................................................................................................................................................................................................................................................GCAGCAGCAA---CAGCA---------------------------------------GCAG----------------------------------------------------------------CA...................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
....................................................................................................................................................................................................................................CAG------------CA---GCAGCAACA------------------------------ACAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000
droBip1
GCGACT----A------------------TGG---------------CAGCGTACGGA-----GTC--------------------CCCAGGA----------------GCC-----------------------------------------------------------------------ACAA-C--AT-----------CACCAGCTGCAGCAGCAGCAACAACAG------------CAGG---CGCAACA---------------------------------------------------------------GCAGCA---GCAG------CAGCACA---ATCA------GCAGCAACAGCA---------ACAG-------------------------------------------------AAT---------ACGTACTACGACTT---------------CAACAGCA---AG----------------TGGAACA------------------CGCCCCTCAAGACGGAAAACAAT----------------------------------------------------------------------------------------GCG-GCGTCGG------TTTCGCCAGCGGC---------------------CACCAT------------------------------------------------------------------------CAACA------------------------------------------TACCCACSizeHit CountTotal NormTotal
No Reads
droKik1
CTGCACCCA----GAGCTCT------------------------------------------------------------------TTG--------------------------------------------------------------------------------CCGCC---GCAGCAGCC----ACG--------------CATCAGCAACA---GCGGGAGCAA---CA------GCA---GCAACAACA------------------------------------------------------GGCG---CAGCAGCA------TCAAAGGGAAAGG---------GAAA------GAG---A---------ACGAGAGCGG------------------------------------------------------------------------------------GAAAGGGA---AA----------------GAGAAAGAGAACGG-------------------------------------------------------GAACGGGAG----------------------------------------------------------CAG-CACCTGGGCATTGGC--------------------------------CACCTGCCGCACTCCC----------------------------------------------AT-------------CTAGCT--------------------------------------GCCGATCT-GASizeHit CountTotal NormTotal
No Reads
droFic1
TTGCAGCCGCCGCCGC--------------CT--CTGCCTCCGCCAGCGTCTCA---------GCCAACAGCAGCA---------------AC----------------AT---------------------------------------------------------------------------------------------CAACAGCATCAGCAACATCAACAGCAG---CA------AC---AGCAACAACA------------------------------------------------------ACGC---CAGCAGCA---GCAG------CAACACG---AACAACAGC------AACAACA---------ACAGCGG----------------------------------------------CAGCAGT--------------------------------------------CCG----------------AGCAGCAGCAGCA--------------------------------------------------------------------------------------------------------ACCACA---AC--------AGC-AATCTCA------ACCT-------------------------------------------------------------------------GAGCGGCGG-ATCGCTTTCGCC-----GAGCCACT---TG------------------------------------------AGCCAGCSizeHit CountTotal NormTotal
No Reads
droEle1
GCAGCG----A--------------------------------------------------------TCAG---CAT---------CA---GC----------------AGC---------------------------------------AGCATCAGCATCAG------------------------------------------------------CACCTGCCGCAG---CC------GC---AGCATCATCA------------------------------------------------------GCAC---CAGCAGCG---TCAG------CAACAGC---AACAGCGGC------ATCAGCAGCAGAAGCGGCAGCAG---CAT----------------------------------------CAGCA-----------------------------------TCCTCTAGCAACTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTACGAGACGGCCACATACGGAGATTCCCTCGGTGACTTCGTG----GTCAT-----CTTTG-----GGACCAC-CGACG------------------------------------------CACTGTCSizeHit CountTotal NormTotal
No Reads
droRho1
GCTACA----G------------------CCT--CAAT------------------------------------------------CT---CC----------------AGCTGCATGC-----------------------------------------------CGTCTACA---ACGACAATCTGATGTA---C-------ATGCAACAGCAGCA---GCAGCAACAG---CA------GCA---GCAGCAACA------------------------------------------------------ACAG---CAACATCACCTGCAA------------C---------ATCAGC---AAC---A---------CCTG------------------------------------------------------------------------------------------CAAC-------------------------------------------------------------------------------------------------------------GCT-GGCTGGATCAGGAGTCTTTGGCCAGCACAAGGACA---ACCACAAG--CCAGCCCCTGA------TCCT----------------------------------TGTGGC----------------------------------------GG-AT-----CCTGC----------GCCCACAA------------------------------------------ACCTGACSizeHit CountTotal NormTotal
No Reads
droBia1
GTACCAC-------------------------------------------------------------------------------CCGCACC----------------AGCTGCACGCCCACGCC----------------------------------------------------------CTG-C---C--------------CACCAGCAGCA---GCAGCAACAG---CAGCAGCAACAGC---AGCAGCA---------------------------------------------------------------GCAACA---GCA------------------------ACAGC---AGCAG----------------------------------------------------------------CTCCACG---GCGAT-----------CCCGACGACGAG--------------------------------------------------------------------------------------------------------GAGGTGGAGAACGCGCGGCTGGAGCAGGTG--------CGGCGCAAGCAGA---AC--------GCC-CAGCTGA------GCCT-------------------------------------------------------------------------GGT----GGAGT-----CCTTCC----T------------------------------------------------------GACCACCSizeHit CountTotal NormTotal
No Reads
droTak1
GCAACA----G------------------CAG------------------------------------------CAGCAGCAAATGATGCAGC----------------AGC---------------------------------------------------AGCAGGGCAAG---TCGCCCATGG-A---G-----------CTGCAACAGCAGCA------GCAA------------------------CAACA------------------------------------------------------GCAA---------CA---GATG------CAGCAGGACAACTC---ACAGC---AGCAG----------------------------------------------------------------CAGCACT---ACAATCAGTACCAGCT---------------GAAC-----------ATGCAGATGGGCGGCGGAGGAG-------------------------------------------------------------GTCCAGGCG----------------------------------------------------------GAG-GACCTGGTCCTGGACCA----------------------------------GGCGGCATGCCC----------------------------------------------GG----------CATGCA-----------------------------------------------GCAGASizeHit CountTotal NormTotal
No Reads
droEug1
ATGCCGCCGCAGCAA--------------------------------------AT---------CCTG------------------CAGCAGC----------------GGC---------------------------------------------------AGTTG-CAGCA---GCAGCTGCC----GCC-----------CAACAGCAGCAGGC---ACAGCAGCAG------------CAGCAGCAACAACA------------------------------------------------------ACAG---------CA---ACAG------CAGCAGG---CCCAGCAACAGC---AGC---A---------GCAA------------------------------------------------------------------------------------------CAACAACAGGTGGC------------CGGCGGAGCAGCACCA-----------------CCCACAGCTGCCGACAGT----------------------------------------------------------------------------------------TTG-TCCATGG------CTGTGGCAGCGGCGGCTGC--------------------------------------------------------------------------------------------AAAACA------------------------------------------AGCTG--SizeHit CountTotal NormTotal
No Reads
dm3
GGGTGGTGGCATT------G------------------------------------------------------------------C----------------------GGCAGGT-------GCCTCACTTGACCACAA------------------------------GGCA---GCAGC-TTTG-T-GCTCTACAGGCATTAACAAACAGCAGCA---GCAGCAGCAA---CA------ACA---ACAACAACA------------------------------------------------------ACTG---CAACAACA-------------------------------------------------------------------TTTGCAATCAGTCGCCGAACGGCAGCAATAACAACAACAGCAG---TTTGATGAT-----------GACGATGACGAGCAACCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAA----------CACCAACCG------------------------------------------AGCTGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGAT-----------GACGATGACGT................................................................................................................................................................................................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCAGCAATAACAACT.........................................................................................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................ACAAACAGCAGCA---GCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................ACAGCAGCA---GCAGCAGCAA---CA------ACA---ACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27180.1730000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................ACAGCAGCA---GCAGCAGCAA---CA------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGAT-----------GACGATGACGA................................................................................................................................................................................................................................................................................................................................................................1890.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GCA---GCAGCAGCAA---CA------ACA---ACAACAACA------------------------------------------------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AA---CA------ACA---ACAACAACA------------------------------------------------------ACTG---C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................CAA---CA------ACA---ACAACAACA------------------------------------------------------ACTG---CAACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................A------ACA---ACAACAACA------------------------------------------------------ACTG---CA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19160.0610000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................CAAACAGCAGCA---GCAGCAGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AA---CA------ACA---ACAACAACA------------------------------------------------------ACTG---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................AGCAGCA---GCAGCAGCAA---CA------AC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................................GCAGCAGCAA---CA------ACA---ACAACAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................AGCAGCA---GCAGCAGCAA---CA------ACA---ACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................GCAGCAGCAA---CA------ACA---ACAACAACA------------------------------------------------------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................ACCACAA------------------------------GGCA---GCAGC-CA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................AGCA---GCAGCAGCAA---CA------AC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................ACAGCAGCA---GCAGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................CAGCAGCA---GCAGCAGCAA---CA------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................CA---GCAGCAGCAA---CA------ACA---ACAACAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................CAGCAGCAA---CA------ACA---ACAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................CAGCAGCA---GCAGCAGCAA---CA------ACA---A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................CA---GCAGCAGCAA---CA------ACA---ACAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................CAGCAGCAA---CA------ACA---ACAACAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................ACAGCAGCA---GCAGCAGCAA---C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
droSim2
GAGTTGCAGCAAC----------------------------------------AT----------CAGCAG---------------CAGCAAC----------------AGC---------------------------------------------------AGC---------------------------------------AACGACAGCAGCA------------------------GC---AGCAACATCA------------------------------------------------------ACAG---CAACAGCA---TCAGCAACTGCAGCAG---------CAGC------AAC---A---------GCAGCAGCAA------------------------------------------------------------------------------------CAACAGCA---AC----------------TGAAGCAACAACAT----------------------------------------------------------------------------------------------------------------------------------CAG------CCCGACCAGCAGCAACTGCAG--------------------------------------------------------------------------------------------AAGATCATCACGCTGAAGGATCAGGTGATTGGAGCGCTGACCAGCGAGCTGGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................AGCAG---------------CAGCAAC----------------AGC---------------------------------------------------AGC---------------------------------------AACG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.75300000300000000000
........................................................................................................................................................................................................................................................................................................................................................G---------CAGC------AAC---A---------GCAGCAGCAA------------------------------------------------------------------------------------C...........................................................................................................................................................................................................................................................................................................................................................20200.05100000000001000000
........GCAAC----------------------------------------AT----------CAGCAG---------------CAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000000001000000
droSec2
GCGTGAATGCATGGGCCTTG------------------------------------------------------------------CAGCAGC----------------AGCAACAAACCGCCGCC----------------------------------------------------------CTG-C--AC--------------CATCAGCAACA------GCAGCAGCAGCAGCATCAACAGC---AGCAACACCAACAGCACCTACAGCAACACCATCAAGCGCACCATCAGCATGTCCTGCAGCAGCAGCAG---CAGCA---------------------------------------AC----------------------------------------------------------------AGCAGCACT--------------------------------------------CCC----------------AGCATCAGCATCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC----AGCAA-----CATCA-----CGGCCACCCGCTG------------------------------------------CATCCGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................CATCAGCAACA------GCAGCAGCAGCAGCAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010100
................................................................................................................................................................................................C--------------CATCAGCAACA------GCAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310001
....................................................................................................................................................................................................................................CAGCAGCAGCATCAACAGC---AGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2280.1310001
....................................................................................................................................................................................................................................................AGC---AGCAACACCAACAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19180.0610001
droYak3
CCGCCACCGCAGCAACCGGG------------------------------------------------------------------CAGCTTC----------------CGC------------------------------------------------------------CG---GCAACCATCG-T--TG-----------CACCAACAGCAGCA------GCAGCAA---CA---GCAACAGC---AGCAACT------------------------------------------------------TC-------GCGGCA---ACAA------CAACACG---AC-----GCAGC---AGC---A---------GCAG------------------------------------------------------------------------------------------CAACAGCAGGCGGCCTTGCTGATGGGTG---------------------------------------------------------------------------------------------------------GTGGGTCGGTGGGTGGGCCTGCACCGCAGATGATT-CCCCTGG------C--G-------------------------------------------------------------------------GGT----GGCAT-----CCAGC-AGCAGAGCCTCC----------------------------------------------------CASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTG---------------------------------------------------------------------------------------------------------GTGGGTCGGTGGGTGGGCCC...................................................................................................................................................................................................2711.00100100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGGTCGGTGGGTGGGCC....................................................................................................................................................................................................1911.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCAGATGATT-CCCCTGG------C--G-------------------------------------------------------------------------GGT----G.................................................................................2511.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................AGC---AGC---A---------GCAG------------------------------------------------------------------------------------------CAACAGCAGGCGGCC.............................................................................................................................................................................................................................................................................................................................................2620.50100001000000
....................................................................................................................................................................................................................................................................................................................................................................GCAGC---AGC---A---------GCAG------------------------------------------------------------------------------------------CAACAGCAGG..................................................................................................................................................................................................................................................................................................................................................2390.11101000000000
................................................................................................................................................................................................................AACAGCAGCA------GCAGCAA---CA---GCAACAGC---A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28120.08101000000000
............................................................................................................................................................................................................................................................................................................................................................................AGC---A---------GCAG------------------------------------------------------------------------------------------CAACAGCAGGC.................................................................................................................................................................................................................................................................................................................................................19170.06101000000000
.............................................................................................................................................................................................................ACCAACAGCAGCA------GCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000000000
.......................................................................................................................................................................................................................GCA------GCAGCAA---CA---GCAACAGC---AGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
..................................................................................................................................................................................................................................AGCAA---CA---GCAACAGC---AGCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000100000
................................................................................................................................................................................................................AACAGCAGCA------GCAGCAA---CA---GC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100100000000
droEre2
GCATCC----GCAGTACCAT------------------------------------------------------------------CCGCACC----------------AGCTGCACGCCCATGCC----------------------------------------------------------CTG-C--CG--------------CATCAGCA------GCAGCAGCAACAGCA------------GCAACAACA------------------------------------------------------GCAG---CAGCAGCA---GCAG----------------------------------------------------------------------------------------------------CTGCACG---GCGAT-----------CCCGACGACGAG--------------------------------------------------------------------------------------------------------GAGGTGGAGAACGCTCGCCTGGAGCAGGTG--------CGTCGCAAGCAGA---AC--------GCC-CAGCTGA------GCCT-------------------------------------------------------------------------GGT----GGAGT-----CCTTC----------------CT------------------------------------------CACCACCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................GCAACAACA------------------------------------------------------GCAG---CAGCAGCA---.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1021000100
...............................................................................................................................................................................................................CATCAGCA------GCAGCAGCAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1021100000
...........................................................................................................................................................................................................................................................ACAACA------------------------------------------------------GCAG---CAGCAGCA---GC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510001000
.....................................................................................................................................................................................................................................AACAGCA------------GCAACAACA------------------------------------------------------GCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000010
.........................................................................................................................................................................................................................................GCA------------GCAACAACA------------------------------------------------------GCAG---CAGCAGCA---GC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000100
...........................................................................................................................................................................................................................................A------------GCAACAACA------------------------------------------------------GCAG---CAGCAGCA---GCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000010
........................................................................................................................................................................................................................................AGCA------------GCAACAACA------------------------------------------------------GCAG---CA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510010000
..........................................................................................................................................................................................................................................................AACAACA------------------------------------------------------GCAG---CAGCAGCA---GCAG----------------------------------------------------------------------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000
....................................................................................................................................................................................................................................CAACAGCA------------GCAACAACA------------------------------------------------------GCAG---CA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0511000000
.....................................................................................................................................................................................................................CA------GCAGCAGCAACAGCA------------GCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000100
...........................................................................................................................................................................................................................................A------------GCAACAACA------------------------------------------------------GCAG---CAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000000
.........................................................................................................................................................................................................................................GCA------------GCAACAACA------------------------------------------------------GCAG---CAGCAGCA---G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000010

Generated: 05/17/2015 at 11:22 PM