ID:

dps_751

 Coordinate:

2:23597975-23598125 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.9 -13.3 -13.2 -13.0

Flybase annnotation

CDS [Dpse\GA26315-cds]; exon [Dpse\GA26315:2]; intron [Dpse\GA26315-in]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DYakRCHelitron-
mature
  1. Unknown_group_13:77355-77375 +
  2. Unknown_group_10:23149-23169 +
  3. XL_group1e:3233193-3233213 +
  4. Unknown_singleton_1968:2853-2873 +
  5. Unknown_group_470:10439-10459 +
  6. Unknown_group_21:27347-27367 +
  7. 3:618981-619001 +
  8. 3:4573329-4573349 +
  9. 3:8108565-8108585 +
  10. 2:15744079-15744099 +
  11. 2:28984481-28984501 +
  12. XL_group3a:2232852-2232872 +
  13. Unknown_group_223:13238-13258 +
  14. Unknown_group_607:5155-5175 +
  15. Unknown_group_103:1345-1365 +
  16. XR_group6:630746-630766 +
  17. Unknown_singleton_3743:1613-1633 +
  18. Unknown_singleton_642:2335-2355 +
  19. Unknown_singleton_1794:486-506 +
  20. Unknown_singleton_2995:1731-1751 +
  21. Unknown_group_497:17388-17408 -
  22. Unknown_group_98:8164-8184 -
  23. Unknown_group_84:1307-1327 -
  24. Unknown_singleton_3883:3955-3975 -
  25. Unknown_group_34:26176-26196 -
  26. Unknown_group_267:385-405 -
  27. Unknown_group_491:2884-2904 -
  28. 3:2295695-2295715 -
  29. 3:2307620-2307640 -
  30. 2:23888937-23888957 -
  31. 4_group4:5640969-5640989 -
  32. Unknown_group_203:6466-6486 -
  33. Unknown_singleton_2748:29503-29523 -
  34. Unknown_group_647:11653-11673 -
  35. Unknown_singleton_1602:736-756 -
  36. Unknown_group_793:613-633 -
  37. Unknown_singleton_3451:876-896 -
  38. Unknown_singleton_2164:1274-1294 -
  39. Unknown_singleton_1621:1277-1297 -
  40. Unknown_singleton_3587:888-908 -
  41. Unknown_group_6:77501-77521 -
  42. Unknown_group_1:168770-168790 -
  43. Unknown_group_17:244-264 -
  44. Unknown_group_141:5026-5046 -
  45. 2:18217845-18217865 -
  46. 2:20558992-20559012 -
  47. 2:23439544-23439564 -
  48. 2:29763162-29763182 -
  49. 4_group1:4553585-4553605 -
  50. 4_group4:5723968-5723988 -
  51. Unknown_group_57:11671-11691 -
  52. Unknown_group_406:6664-6684 -
  53. Unknown_singleton_2746:686-706 -
  54. Unknown_singleton_1357:139-159 -
  55. Unknown_group_365:4356-4376 -
  56. Unknown_group_849:1665-1685 -
  57. Unknown_singleton_2504:2365-2385 -
  58. Unknown_singleton_2339:615-635 -
  59. Unknown_group_484:1214-1234 -
  60. Unknown_singleton_2512:540-560 -
  61. Unknown_group_82:31128-31148 +
  62. Unknown_group_555:8192-8212 +
  63. Unknown_group_141:11258-11278 +
  64. 3:2436984-2437004 +
  65. 3:3199698-3199718 +
  66. 3:11530513-11530533 +
  67. 3:18710602-18710622 +
  68. 2:5733414-5733434 +
  69. 2:11265278-11265298 +
  70. 2:11562895-11562915 +
  71. 2:15513646-15513666 +
  72. XL_group3a:1946890-1946910 +
  73. XR_group6:3903794-3903814 +
  74. XR_group6:12870600-12870620 +
  75. XL_group1a:3606447-3606467 +
  76. XL_group1a:7612834-7612854 +
  77. Unknown_singleton_1765:869-889 +
  78. Unknown_group_790:1128-1148 +
  79. Unknown_group_790:2802-2822 +
  80. Unknown_singleton_3654:1079-1099 +
  81. Unknown_group_8:40844-40864 -
  82. Unknown_group_332:10511-10531 -
  83. 4_group5:1785955-1785975 -
  84. XL_group3b:362754-362774 -
  85. 3:120904-120924 -
  86. 3:1293268-1293288 -
  87. 3:12682238-12682258 -
  88. 3:14000844-14000864 -
  89. 2:24980511-24980531 -
  90. Unknown_group_221:37956-37976 -
  91. 4_group1:267218-267238 -
  92. 4_group1:267926-267946 -
  93. Unknown_group_619:7256-7276 -
  94. Unknown_group_664:285-305 -
  95. XL_group1a:688981-689001 -
  96. XL_group1a:1233871-1233891 -
  97. XL_group1a:1600042-1600062 -
  98. Unknown_group_569:156-176 -
  99. Unknown_singleton_1221:1242-1262 -
  100. Unknown_singleton_1217:449-469 -
  101. Unknown_group_170:10707-10727 -
  102. Unknown_group_404:13395-13415 -
  103. Unknown_singleton_880:42661-42681 -
  104. 4_group5:1934545-1934565 -
  105. 3:4609730-4609750 -
  106. 3:15572663-15572683 -
  107. dps_751  2:23598029-23598049 -
  108. 2:24404718-24404738 -
  109. XL_group3a:2273608-2273628 -
  110. Unknown_singleton_348:489-509 -
  111. XR_group8:3848898-3848918 -
  112. 4_group3:8771736-8771756 -
  113. XL_group1a:1012876-1012896 -
  114. XL_group1a:2197683-2197703 -
  115. XL_group1a:5095966-5095986 -
  116. Unknown_singleton_1919:1234-1254 -
  117. Unknown_group_625:3962-3982 -
  118. Unknown_group_408:5842-5862 -
  119. Unknown_singleton_635:732-752 -
  120. Unknown_singleton_3840:664-684 -
  121. Unknown_group_297:11080-11100 +
  122. Unknown_singleton_2344:2767-2787 +
  123. Unknown_group_304:1490-1510 +
  124. Unknown_singleton_799:1353-1373 +
  125. Unknown_group_232:30578-30598 +
  126. 3:2150299-2150319 +
  127. 3:7137581-7137601 +
  128. 3:17723793-17723813 +
  129. 2:3495318-3495338 +
  130. 2:20539325-20539345 +
  131. XL_group3a:2690407-2690427 +
  132. 4_group1:606646-606666 +
  133. Unknown_group_22:1918-1938 +
  134. Unknown_group_130:8972-8992 +
  135. 4_group4:6574269-6574289 +
  136. Unknown_group_51:37510-37530 +
  137. Unknown_singleton_3024:1958-1978 +
  138. Unknown_singleton_1726:1962-1982 +
  139. Unknown_singleton_1634:1137-1157 +
  140. Unknown_singleton_4023:2009-2029 +
star
  1. Unknown_group_81:627-649 -
  2. Unknown_group_320:6132-6154 -
  3. Unknown_group_21:9856-9878 -
  4. Unknown_group_33:1493-1515 -
  5. Unknown_group_208:12837-12859 -
  6. 3:180825-180847 -
  7. 3:792583-792605 -
  8. 3:5272923-5272945 -
  9. dps_751  2:23597977-23597999 -
  10. 2:23888877-23888899 -
  11. 2:30359090-30359112 -
  12. Unknown_group_263:2852-2874 -
  13. 4_group3:863651-863673 -
  14. 4_group4:5653925-5653947 -
  15. XR_group6:3836460-3836482 -
  16. XR_group6:4981392-4981414 -
  17. Unknown_singleton_1602:1653-1675 -
  18. Unknown_singleton_2539:55-77 -
  19. Unknown_singleton_3755:296-318 -
  20. Unknown_singleton_2010:394-416 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTAATCACCATTGGTATTCAGGACTACCGATATAGAAACGAGTATTACAAGTGAGTATATTACACCTTGGGCTCTTTTTATACCCGATACTCAAAATGAGTATTGGGGTATATTAGATTTGTGGTGAAAGTGGATGTGTGTAACGTCCAGAGGGAATCGTTTCCGAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCTGTCCGTCCGTCCGTCTGTCCGTCCCCTTC
******************************************************************************************************************************....(((....((((...(((.(((((((......)))............)))).)))..))))......)))**************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 SRR902010
ovaries
 SRR902011
testis
 M022
male body		 GSM444067
head
 GSM343916
embryo
 M059
embryo
..............................................................................................................................AAAGTGGATGTGTGTAACGTC........................................................................................................ 21 0 20 1.80 36 0 36 0 0 0 0 0 0
.......................................................................................................................TGTGGTGAAAGTGGATGTGTG............................................................................................................... 21 0 20 0.65 13 0 3 10 0 0 0 0 0
.......................................................................................................................TGTGGTGAAAGTGGATGTGTGTAACG.......................................................................................................... 26 0 20 0.60 12 12 0 0 0 0 0 0 0
.................................................................................................................................................TCCAGAGGGAATCGTTTCCGA..................................................................................... 21 0 5 0.40 2 2 0 0 0 0 0 0 0
................................................................................................................................................................................TTCTTGATCAGCATCAATAGCCG.................................................... 23 0 20 0.35 7 7 0 0 0 0 0 0 0
.......................................................................................................................................................................................TCAGCATCAATAGCCGAGTC................................................ 20 0 20 0.35 7 7 0 0 0 0 0 0 0
..........................................................................................TCAAAATGAGTATTGGGGTAT............................................................................................................................................ 21 0 20 0.30 6 0 6 0 0 0 0 0 0
.......................................................................................................................TGTGGTGAAAGTGGATGTGTGT.............................................................................................................. 22 0 20 0.30 6 6 0 0 0 0 0 0 0
......................................................................................................................................TGTGTGTAGCGTCCAGAGGG................................................................................................. 20 1 7 0.29 2 2 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TCTGTCTGTCCGTCCGTCC................. 19 0 20 0.25 5 5 0 0 0 0 0 0 0
...............................................................................................................................................CGTCCAGAGGGAATCGTTTCC....................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0 0 0
..........................................................................................................................................TGTAACGTCCAGAGGGAATCG............................................................................................ 21 0 4 0.25 1 1 0 0 0 0 0 0 0
............................................................................................................................TGAAAGTGGATGTGTGTAAC........................................................................................................... 20 0 20 0.25 5 5 0 0 0 0 0 0 0
.............................................................................................................................................................................................TCAATAGCCGAGTCGATTGAGCC....................................... 23 0 20 0.25 5 5 0 0 0 0 0 0 0
.....................................................................................................................TTTGTGGTGAAAGTGGATGGGTG............................................................................................................... 23 1 20 0.25 5 0 0 5 0 0 0 0 0
......................................................................................................................................TGTGTGTAACGTCCAGAGGGAA............................................................................................... 22 0 4 0.25 1 0 1 0 0 0 0 0 0
......................................................................................................................................TGTGTGTAACGTCCAGAGGG................................................................................................. 20 0 4 0.25 1 0 1 0 0 0 0 0 0
.........................................................................................................................................GTGTAACGTCCAGAGGGAATC............................................................................................. 21 0 4 0.25 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................CGATTGAGCCATGTCTGTC.............................. 19 0 20 0.25 5 5 0 0 0 0 0 0 0
...............................................CAAGTGCGGATATTACAACT........................................................................................................................................................................................ 20 3 5 0.20 1 0 0 0 0 1 0 0 0
.................................................................................................................................................TCCAGAGGGAATCGTTTCCG...................................................................................... 20 0 5 0.20 1 1 0 0 0 0 0 0 0
....................................................................................................................................GATGTGTGTGGCGTCCAGAGG.................................................................................................. 21 2 12 0.17 2 2 0 0 0 0 0 0 0
....................................................................................................................................GATGTGTGTAACGTCCAGAGG.................................................................................................. 21 0 6 0.17 1 1 0 0 0 0 0 0 0
......................................................................................................................TTGTGGTGAAAGTGGATGTGTGTAACG.......................................................................................................... 27 0 20 0.15 3 3 0 0 0 0 0 0 0
.....................................................................................................................TTTGTGATGAAAGTGGATGTGTG............................................................................................................... 23 1 20 0.15 3 3 0 0 0 0 0 0 0
...................................................................................................................................................................................TTGATCAGCATCAATAGCCGAGTCGATT............................................ 28 0 20 0.15 3 0 0 3 0 0 0 0 0
.............................................................................................................................................................................ATATTCTTGATCAGCATCAATAGC...................................................... 24 0 20 0.15 3 0 0 3 0 0 0 0 0
....................................................................................................................................GATGTGTGTAGCGTCCAGAGGGA................................................................................................ 23 1 7 0.14 1 1 0 0 0 0 0 0 0
......................................................................................................................................TGTGTGTAGCGTCCAGAGGGA................................................................................................ 21 1 7 0.14 1 1 0 0 0 0 0 0 0
...........................................CTTACAATTGGGTATATTAC............................................................................................................................................................................................ 20 3 8 0.13 1 0 0 0 0 0 1 0 0
....................................................................................................................ATTTGTGGTGAAAGTGGAT.................................................................................................................... 19 0 20 0.10 2 2 0 0 0 0 0 0 0
.....................................................................................................................TTTGTGGTGAAAGTGGATGTGTGTAAC........................................................................................................... 27 0 20 0.10 2 0 0 0 2 0 0 0 0
.................................................................................................................................................TCCAGAGGGAGTCGTTTCCGA..................................................................................... 21 1 10 0.10 1 1 0 0 0 0 0 0 0
..............................................................................................................TATTAGATTTGTGGTGAAAG......................................................................................................................... 20 0 20 0.10 2 0 0 0 2 0 0 0 0
................................................................................................................TTAGATTTGTGGTGAAAGTGGATGT.................................................................................................................. 25 0 20 0.10 2 0 0 2 0 0 0 0 0
.......................................................................................................................................................................................TCAGCATCAATAGCCGAGTCGATTGAGCC....................................... 29 0 20 0.10 2 2 0 0 0 0 0 0 0
.........................................................................................................................TGGTGAAAGTGGATGTGTG............................................................................................................... 19 0 20 0.10 2 0 0 0 2 0 0 0 0
...................................................................................................................GATTTGTGGTGAAAGTGG...................................................................................................................... 18 0 20 0.10 2 2 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TCTGTCTGTCCGTCCGTCCG................ 20 0 20 0.10 2 0 0 0 2 0 0 0 0
............................................................................................................................................................................TATATTCTTGATCAGCATCAA.......................................................... 21 0 20 0.10 2 0 0 2 0 0 0 0 0
..............................................................................................................TATTAGATTTGTGGTGAAAGTGG...................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0 0 0
.............................................................................................................................GAAAGTGGATGTGTGTAACGT......................................................................................................... 21 0 20 0.10 2 0 2 0 0 0 0 0 0
......................................................................GCTCTTTTTATACCCGATAC................................................................................................................................................................. 20 0 12 0.08 1 1 0 0 0 0 0 0 0
.......................................................................................................................................GTGTGTAGCGTCCAGAGGGAG............................................................................................... 21 2 14 0.07 1 1 0 0 0 0 0 0 0
.....................................................................................................................................ATGTGTGTAACGTCCAGAGGGAATCAT........................................................................................... 27 1 15 0.07 1 0 1 0 0 0 0 0 0
................................................................................................................................................GTCCGGAGGGAGTCGTTTCCG...................................................................................... 21 2 16 0.06 1 1 0 0 0 0 0 0 0
............................................................................................................................................TAACGTCCAGAGGGAGTCTTT.......................................................................................... 21 2 18 0.06 1 1 0 0 0 0 0 0 0
............................................................................................................................................TGGCGTCCAGAGGGAATCTTTT......................................................................................... 22 3 18 0.06 1 0 0 1 0 0 0 0 0
............................................................................................................................TGAAAGTGGATGTGTGTAGC........................................................................................................... 20 1 20 0.05 1 0 1 0 0 0 0 0 0
...................................................................................................................GATTTGTGGTGAAAGTGGATGT.................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGTCTGTCCGTCCGTCCGTC.............. 20 0 20 0.05 1 0 0 0 0 0 0 1 0
..........................................................................................................................GGTGAAAGTGGATGTGTGTAAC........................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................TTTGTGGTGCAAGTGGATGTGTGT.............................................................................................................. 24 1 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................TTTGGGGTGAAAGTGGATGTG................................................................................................................. 21 1 20 0.05 1 0 0 0 0 0 0 1 0
.....................................................................................................................TTCGTGGTGAAAGTGGATGTGTG............................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................................................................................TGTGGTGAAAGTGGATGTGTGTA............................................................................................................. 23 0 20 0.05 1 0 0 1 0 0 0 0 0
.....................................................................................................................TTTGTGGTGAAAGTGGATGTGTGTGA............................................................................................................ 26 1 20 0.05 1 0 1 0 0 0 0 0 0
......................................................................................................................................TGTGTGTAACGTCTAGAGGGA................................................................................................ 21 1 20 0.05 1 1 0 0 0 0 0 0 0
......................................................................................................................TTGTGGTGAAAGAGGATGTGTG............................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0
........................................................................................................................GTGGTGAAAGTGGATGTGTG............................................................................................................... 20 0 20 0.05 1 0 1 0 0 0 0 0 0
...............................................................................................ATGAGTATTGGGGTATATTA........................................................................................................................................ 20 0 20 0.05 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................TCTGTCTGTCCGTCCGTCCGTC.............. 22 0 20 0.05 1 0 0 0 0 0 0 0 1
........................................................................TCTTTTTATACCCGATACTCAAAA........................................................................................................................................................... 24 0 20 0.05 1 0 0 0 0 0 0 0 1
.................................................................................................................................................................................................................GCCATGTCTGTCTGTCCGTCC..................... 21 0 20 0.05 1 0 1 0 0 0 0 0 0
.....................................................................................................................TTTGTGGTGAAAGTGTATGTG................................................................................................................. 21 1 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................................................................TATTAGATTTGTGGTGAAAGTGGATG................................................................................................................... 26 0 20 0.05 1 0 0 0 1 0 0 0 0
........................................................................TCTTTTTATACCCGATACTCAAAATGA........................................................................................................................................................ 27 0 20 0.05 1 0 0 1 0 0 0 0 0
.....................................................................................................................TTTGTGGTGAAAGTGGAAGTGTGT.............................................................................................................. 24 1 20 0.05 1 0 0 1 0 0 0 0 0
...........................................................................................CAAAATGAGTATTGGGGTATATT......................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0
........................................................................................................................GTGGTGAAAGTGGATGTGTGTAACG.......................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................TTTGTGGTGAAAGAGGATGTGTGT.............................................................................................................. 24 1 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TGTCTGTCTGTCCGTCCGTCCGTCTG............ 26 0 20 0.05 1 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................TGAGCCATGTCTGTCTGTCCGTCC..................... 24 0 20 0.05 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................................CTTGATCAGCATCAATAGCCGAGT................................................. 24 0 20 0.05 1 0 1 0 0 0 0 0 0
......................................................................................................................................TGTGTGTGGCGTCCAGCGGGA................................................................................................ 21 3 20 0.05 1 0 0 0 0 0 1 0 0
.................................................................................................................TAGATTTGTGGTGAAAGT........................................................................................................................ 18 0 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................TTTGTGGTGAAAGAGGATGTGT................................................................................................................ 22 1 20 0.05 1 0 1 0 0 0 0 0 0
............................................................................................................................TGAAAGTGGATGTGTGTAACGTC........................................................................................................ 23 0 20 0.05 1 0 1 0 0 0 0 0 0
.....................................................................................................................TTTGTGGTGAAAGTGGATGTGTTTA............................................................................................................. 25 1 20 0.05 1 0 0 0 0 0 0 1 0

Anti-sense strand reads

GATTAGTGGTAACCATAAGTCCTGATGGCTATATCTTTGCTCATAATGTTCACTCATATAATGTGGAACCCGAGAAAAATATGGGCTATGAGTTTTACTCATAACCCCATATAATCTAAACACCACTTTCACCTACACACATTGCAGGTCTCCCTTAGCAAAGGCTTCATATATATAAGAACTAGTCGTAGTTATCGGCTCAGCTAACTCGGTACAGACAGACAGGCAGGCAGGCAGACAGGCAGGGGAAG
****************************************************....(((....((((...(((.(((((((......)))............)))).)))..))))......)))****************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011
testis
 M040
female body
 SRR902010
ovaries
 M059
embryo
 SRR902012
CNS imaginal disc
 V112
male body		 GSM343916
embryo
 GSM444067
head
................................................................................................................................................................................................................................GGCAGGCAGGCAGACAGGCAG...... 21 0 20 10.60 212 212 0 0 0 0 0 0 0
............................................................................................................................................................................................................TAACTCGGTACAGACAGACAGGCAG...................... 25 0 20 3.70 74 74 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................CAGGCAGGCAGGCAGACAGGCA....... 22 0 20 3.40 68 68 0 0 0 0 0 0 0
...................................................................................................................................................................GCTTCATATATGTAAGAACTAGTCGT.............................................................. 26 1 1 2.00 2 0 0 2 0 0 0 0 0
......................................................................CGAGAAAAATATGGGCTATGAGTT............................................................................................................................................................. 24 0 12 2.00 24 0 13 8 0 0 3 0 0
...............................................................................................................................................................................................................................AGGCAGGCAGGCAGACAGGCAGGGG... 25 0 20 1.15 23 6 0 17 0 0 0 0 0
..................................................................................................................................................................GGCTTCATATATATAAGAACTAGTCGT.............................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GGCAGGCAGGCAGACAGGCAGGG.... 23 0 20 0.95 19 0 0 19 0 0 0 0 0
.......................................................................................................................................................................................................TCAGCTAACTCGGTACAGACAGAC............................ 24 0 20 0.90 18 0 18 0 0 0 0 0 0
.....................................................................................................................................................................TTCATATATATAAGAACTAGTCGTA............................................................. 25 0 20 0.70 14 0 10 4 0 0 0 0 0
.........................................................................GAAAAATATGGGCTATGAGTTTTACT........................................................................................................................................................ 26 0 20 0.65 13 2 3 8 0 0 0 0 0
...................................................................................................CATAACCCCATATAATCTAAACACCAC............................................................................................................................. 27 0 20 0.65 13 0 13 0 0 0 0 0 0
.........................................................................................................................................................................................TCGTAGTTATCGGCTCAGCT.............................................. 20 0 20 0.55 11 0 11 0 0 0 0 0 0
......................................................................................................................................................................................................................CAGACAGACAGGCAGGCAGGCAG.............. 23 0 20 0.50 10 0 0 10 0 0 0 0 0
........................................................................................................CCCCATATAATCTAAACACCACT............................................................................................................................ 23 0 20 0.50 10 5 0 5 0 0 0 0 0
..............................................................................................................................................................................................................................CAGGCAGGCAGGCAGACAGGCAGGGG... 26 0 20 0.45 9 8 0 1 0 0 0 0 0
................................................................................................................................................................................................................TCGGTACAGACAGACAGGCA....................... 20 0 20 0.45 9 0 9 0 0 0 0 0 0
........................................................................................................................................................................................................................GACAGACAGGCAGGCAGGC................ 19 0 20 0.40 8 8 0 0 0 0 0 0 0
.......................................................................GAGAAAAATATGGGCTATGAGTT............................................................................................................................................................. 23 0 20 0.40 8 1 6 1 0 0 0 0 0
...............................................................................................................................................................................................................................AGGCAGGCAGGCAGACAGGCAGGGGAA. 27 0 20 0.35 7 7 0 0 0 0 0 0 0
..................................................................................................................................ACCTACACACATTGCAGGTCT.................................................................................................... 21 0 20 0.35 7 0 7 0 0 0 0 0 0
...............................................................................................................................................................................................TTATCGGCTCAGCTAACTCGGT...................................... 22 0 20 0.30 6 0 6 0 0 0 0 0 0
..................................................................................................................................................................................................................................CAGGCAGGCAGACAGGCAGGGGAA. 24 0 20 0.30 6 6 0 0 0 0 0 0 0
..............................................................................................................................................TGCAGGTCTCCCTTAGCAAAGGCT..................................................................................... 24 0 4 0.25 1 0 1 0 0 0 0 0 0
............................................................................................................................................ATTGCAGGTCTCCCTTAGCAAAGGCT..................................................................................... 26 0 4 0.25 1 0 1 0 0 0 0 0 0
..............................................................................................................................................TGCAGGTCTCCCTTAGCA........................................................................................... 18 0 4 0.25 1 0 1 0 0 0 0 0 0
.........................................................................................................................................CACATTGCAGGTCTCCCTTAGC............................................................................................ 22 0 4 0.25 1 0 1 0 0 0 0 0 0
...............................................................................................................................................GCAGGTCTCCCTTAGCAAAGGC...................................................................................... 22 0 4 0.25 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................TCGGTACAGACAGACAGGCAG...................... 21 0 20 0.25 5 0 0 0 0 5 0 0 0
.............................................................................AATATGGGCTATGAGTTTTACTCAT..................................................................................................................................................... 25 0 20 0.25 5 0 0 5 0 0 0 0 0
......................................................................CGAGAAAAATATGGGCTATGAGTTT............................................................................................................................................................ 25 0 12 0.25 3 1 2 0 0 0 0 0 0
....................................................................................................................................................................CTTCATATATATAAGAACTAGTCGT.............................................................. 25 0 12 0.25 3 0 0 0 3 0 0 0 0
.......................................................................GAGAAAAATATGGGCTATGAGT.............................................................................................................................................................. 22 0 20 0.20 4 2 2 0 0 0 0 0 0
...........................................................................................................................................................................................................................AGACAGGCAGGCAGGCAG.............. 18 0 20 0.20 4 0 0 0 0 4 0 0 0
.................................................................................................................................................................................................................CGGTACAGACAGACAGGCAGGCAGGC................ 26 0 20 0.20 4 0 0 3 0 1 0 0 0
.............................................................................................................................................................................................................................ACAGGCAGGCAGGCAGACAGG......... 21 0 20 0.20 4 4 0 0 0 0 0 0 0
................................................................................................................................................CAGGTCTCCCTTAGCAAAGGCT..................................................................................... 22 0 5 0.20 1 0 1 0 0 0 0 0 0
......................................................................................................AACCCCATATAATCTAAACACCACTTT.......................................................................................................................... 27 0 20 0.20 4 0 3 0 1 0 0 0 0
...................................................................CGCCGAGAAAAATATGGGCTATGAGTT............................................................................................................................................................. 27 2 10 0.20 2 0 0 2 0 0 0 0 0
.................................................................................................................................CACCTACACACATTGCAGGT...................................................................................................... 20 0 20 0.20 4 0 4 0 0 0 0 0 0
..................................................................................................................................................................................................................................CAGGCAGGCAGACAGGCAGGG.... 21 0 20 0.20 4 3 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................................GCAGGCAGACAGGCAGGGGAA. 21 0 20 0.20 4 0 4 0 0 0 0 0 0
.....................................................................CCGATAAAAATATGGGCTATGAGTT............................................................................................................................................................. 25 1 10 0.20 2 0 0 0 2 0 0 0 0
...........................................................................................................................................................................TATATAAGAACTAGTCGTAGT........................................................... 21 0 20 0.20 4 0 0 0 0 0 4 0 0
..........................................................................................................................................................................................................................CAGACAGGCAGGCAGGCAGAC............ 21 0 20 0.20 4 0 4 0 0 0 0 0 0
..................................................................................................................................ACCTACACACATTGCAGGTCTC................................................................................................... 22 0 6 0.17 1 0 1 0 0 0 0 0 0
......................................................................CGAGAAAAATATGGGCTATGAGT.............................................................................................................................................................. 23 0 12 0.17 2 0 0 2 0 0 0 0 0
..............................................................................................................................................................................................................................CAGGCAGGCAGGCAGACAGGCAGGGGA.. 27 0 20 0.15 3 3 0 0 0 0 0 0 0
.........................................................................................................................................................................................................AGCTAACTCGGTACAGACAGACAGGCA....................... 27 0 20 0.15 3 3 0 0 0 0 0 0 0
......................................................................................................................................................................................................CTCAGCTAACTCGGTACAGACAGAC............................ 25 0 20 0.15 3 0 3 0 0 0 0 0 0
.........................................................................................................................................................................................................................ACAGACAGGCAGGCAGGCAGACAGGC........ 26 0 20 0.15 3 0 0 0 0 3 0 0 0
................................................................................................................................................................................................................TCGGTACAGACAGACAGGCAGGC.................... 23 0 20 0.15 3 3 0 0 0 0 0 0 0
........................................................................AGAAAAATATGGGCTATGAGTTTAACT........................................................................................................................................................ 27 1 20 0.15 3 0 0 3 0 0 0 0 0
....................................................................................................................................................................................................................TACAGACAGACAGGCAGGCAGGCAG.............. 25 0 20 0.15 3 0 0 2 0 0 1 0 0
...................................................................................................................................................................................................CGGCTCAGCTAACTCGGTACAGACAG.............................. 26 0 20 0.15 3 0 3 0 0 0 0 0 0
..............................................................................................................................................................................................................ACTCGGTACAGACAGACAGGCAGGC.................... 25 0 20 0.15 3 3 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GCTCAGCTAACTCGGTACAGACAGAC............................ 26 0 20 0.15 3 3 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GACAGACAGGCAGGCAGGCAGACAGGC........ 27 0 20 0.15 3 3 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TCAGCTAACTCGGTACAGACAGA............................. 23 0 20 0.10 2 0 2 0 0 0 0 0 0
......................................................................................................................................................................................................................CAGACAGACAGGCAGGCAGGCAGAC............ 25 0 20 0.10 2 0 0 2 0 0 0 0 0
................................................................................................................................................................................................TATCGGCTCAGCTAACTCGGT...................................... 21 0 20 0.10 2 0 0 0 0 0 2 0 0
.....................................................................................................................................................................................................................................GCAGGCAGACAGGCAGGGGAAG 22 0 20 0.10 2 0 2 0 0 0 0 0 0
...................................................................................................CATAACCCCATATAATCTAAA................................................................................................................................... 21 0 20 0.10 2 0 0 0 2 0 0 0 0
...................................................................................................CATAACCCCATATAATCTAAACACCA.............................................................................................................................. 26 0 20 0.10 2 0 2 0 0 0 0 0 0
.........................................................................................................................................................................................................AGCTAACTCGGTACAGACAGACAG.......................... 24 0 20 0.10 2 0 2 0 0 0 0 0 0
.......................................................................................................................................................................................................................AGACAGACAGGCAGGCAGGCAGACA........... 25 0 20 0.10 2 0 0 2 0 0 0 0 0
...........................................................................................................................................................................................................................AGACAGGCAGGCAGGCAGACAGG......... 23 0 20 0.10 2 0 2 0 0 0 0 0 0
................................................................................................................................................................................................................................GGCAGGCAGGCAGACAGGCAGGGGAA. 26 0 20 0.10 2 0 2 0 0 0 0 0 0
............................................................................................................................ACTTTCACCTACACACATTGC.......................................................................................................... 21 0 20 0.10 2 0 2 0 0 0 0 0 0
.........................................................................................................................................................................................................................ACAGACAGGCAGGCAGGCAGAC............ 22 0 20 0.10 2 0 2 0 0 0 0 0 0
...............................................................................................................................................................................................................................AGGCAGGCAGGCAGACAGGCAGGGGA.. 26 0 20 0.10 2 2 0 0 0 0 0 0 0
........................................................................AGAAAAATATGGGCTATGAGTTTTACT........................................................................................................................................................ 27 0 20 0.10 2 0 0 2 0 0 0 0 0
......................................................................CGAGAAAAATATGGGCTATGGGTT............................................................................................................................................................. 24 1 12 0.08 1 0 1 0 0 0 0 0 0
......................................................................CGAGAAAAATATGGGCTATGAG............................................................................................................................................................... 22 0 12 0.08 1 0 1 0 0 0 0 0 0
......................................................................CGAGAAAAATATGAGCTATGAGTT............................................................................................................................................................. 24 1 13 0.08 1 0 0 0 0 0 0 1 0
.....................................................................................................................................................................TTCATATATATAAGAACTAGTCGTAGT........................................................... 27 0 20 0.05 1 0 0 0 0 0 0 1 0
.......................................................................................................................ACACCACTTTCACCTACACACAT............................................................................................................. 23 0 20 0.05 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................ATCGGCTCAGCTAACTCGG....................................... 19 0 20 0.05 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................AGTTATCGGCTCAGCTAACTCGGTAC.................................... 26 0 20 0.05 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................GGTACAGACAGACAGGCA....................... 18 0 20 0.05 1 0 0 0 0 0 0 0 1
....................................................................................................ATAACCCCATATAATCTAAACACCACT............................................................................................................................ 27 0 20 0.05 1 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................ACAGACAGACAGGCAGGCAGGCAGAC............ 26 0 20 0.05 1 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................GCTCAGCTAACTCGGTACAGACA............................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................TCATAACCCCATATAATCTAAACAC................................................................................................................................ 25 0 20 0.05 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................CTCAGCTAACTCGGTACAGACAGA............................. 24 0 20 0.05 1 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................CTCGGTACAGACAGACAGGCAG...................... 22 0 20 0.05 1 0 0 0 0 1 0 0 0
......................................................................................................AACCCCATATAATCTAAACACCACTT........................................................................................................................... 26 0 20 0.05 1 0 0 0 1 0 0 0 0
...............................................................................TATGGGCTATGAGTTTTACTCA...................................................................................................................................................... 22 0 20 0.05 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................ACAGACAGGCAGGCAGGCAGACAGG......... 25 0 20 0.05 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................................................................GACAGGCAGGCACGCAGACAG.......... 21 1 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................................................................CTAAACACCACTTTCACCTACAC................................................................................................................. 23 0 20 0.05 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................GGTAGAGACAGACAGGCAGGC.................... 21 1 20 0.05 1 0 0 0 0 0 0 1 0
.........................................................................................................................................................................................TCGTAGTTATCGGCTCAGCTA............................................. 21 0 20 0.05 1 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................AGACAGGCAGGCAGGCAGACAGGCAGG..... 27 0 20 0.05 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................CGGTACAGACAGACAGGCAGG..................... 21 0 20 0.05 1 0 1 0 0 0 0 0 0
....................................................................................................ATAACCCCATATAATCTAAACACCACTT........................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................AGTTATCGGCTCAGCTAACTCGGT...................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GGCAGGCAGGCAGACAGGCAGGGGA.. 25 0 20 0.05 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................TAAGAACTAGTCGTAGTTATCGG..................................................... 23 0 20 0.05 1 0 1 0 0 0 0 0 0
.........................................................................................................CCCATATAATCTAAACACCACTTT.......................................................................................................................... 24 0 20 0.05 1 0 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................ACAAACAGGCAGGCAGGCAGACAGGC........ 26 1 20 0.05 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................GGCTCAGCTAACTCGGTACAGA................................. 22 0 20 0.05 1 0 0 0 0 1 0 0 0
................................................................................................................................................................................................TATCGGCTCAGCTAACTCGGTACA................................... 24 0 20 0.05 1 0 0 0 0 0 0 1 0
........................................................................................................................................................................................................................GACAGACAGGCAGGCAGG................. 18 0 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CGGTACAGACAGACAGGCAGGCAGGCA............... 27 0 20 0.05 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................TCGGTACAGACAGACAGGCAGGCAGG................. 26 0 20 0.05 1 0 0 0 0 1 0 0 0
..................................................................................................................TCTAAACACCACTTTCAC....................................................................................................................... 18 0 20 0.05 1 0 0 0 1 0 0 0 0
.......................................................................GAGAAAAATATGGGCTATGAGTTT............................................................................................................................................................ 24 0 20 0.05 1 0 1 0 0 0 0 0 0
...................................................................................................................................CATACACACATTGCAGGTCTCCCT................................................................................................ 24 1 20 0.05 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................AGACAGGCAGGCAGGCAGACAGGC........ 24 0 20 0.05 1 0 0 0 1 0 0 0 0
.......................................................................GAGAAAAATAGGGGCTATGAGTT............................................................................................................................................................. 23 1 20 0.05 1 0 0 1 0 0 0 0 0
...........................................................................................................................CACTTTCACCTACACACATTGC.......................................................................................................... 22 0 20 0.05 1 0 1 0 0 0 0 0 0
.......................................................................GAGAAAAATATGGGCTATGAGTTTTA.......................................................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:23597925-23598175 - dps_751 CTAATCACCA-TTGGTATTC-A--GGACTACCGATATA----------------------------------------------------------GA-------AAC--GAGT-----------------------------ATT-ACAAG-TGAGTATA-T-------------------------TACAC------CTT----GGG------------------------CTCTTTTTATACCCGATACTCAAA----ATGAG-TATTGGGGTATATTAGATTTGTGGTGAAAGTGGATGTGTGTAACGTCCAGAGGGAATCGT-TTCCGA---------------AG----TA--TATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTC--TGTCTGTCCGTCCGTCCGTCTGT----CCGTCCCCTT--------C
droPer2 scaffold_3:6372577-6372843 - dpe_1408 CTTATCACCA-TTGGTATTC-A--GGACTACCGATATA----------------------------------------------------------GG-------AAC--GAGT-----------------------------ATT-ACAAG-TGAGTGTA-T-------------------------TACAC------CTT----GGG------------------------CTCTTTTTATACCCGATACTCAAA----ATGGG-TATTGGGGTATATTAGATTTGTGGTGAAAGTGGATGTGTGTAACGTCCAGAGGGAATCGT-TTCCGA-------CTCCATAAAG----TA--TATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTC--TGTCTGTCCGTCCGTCCGTCTGT----CCGTCTGTCCGTCCCCTTC
droWil2 scf2_1100000004963:2930672-2930920 + ATAATTCCCAAGTACTTTGC-G--AG---------ATA----------------------------------------------------------GA-------AAT--AAAA-------ATTGAA--------------------------------------AAAACAGTATGGAACAATTC----ATGT------AGT-----------T----C--------------ACGTTGTTATACCATACACCCATA------GGG-TGAAATGGTATATTAAAGTCGCCAA-------AATGTATGTAACAGGCAGAAGGAAGCAT-CTCCGA-------CCCCACAAAG----TA--TATATATTCTTGATCAGGATCAACAACCGAGTCGATCTAGCCATGTC--CGTCTGTCCGTCCGTCCGTCCGT----CCGTCCGTCT--------G
droVir3 scaffold_13047:5588602-5588855 - CTGGTTTTTA-TTGTTATGT-C--AAATACAACTTATA--TG------------------------------------------------------GA-------AAT-----------------------------ATTC------------------------------------------------CTG---AAGCCGT-----------T----CACTTTGTT-----GTTGTATTTATACCCTGAACCCATTAAAAATGGG-TATAAGGGTATATTGTATTTGTGCAAAATCCAAATGTATGTAACAGGCTGAAGGAAGCAT-CTCCGA-------CCCCATAATG----T------ATATTCTTGATCAGCATCAATAGCCGAGTCGATCTAACCATGTC--CGTCTGTCTGTCCGTCCGTCCGT----CCGTATGTAT--------G
droMoj3 scaffold_6500:28263214-28263489 - TTAATCATAA-TTTTTAATT-AATT---------------------ATAAATGTATATTTATAT---AAATATAA------------AGAATATAATAATATT---------------------------------------------------GA------A-------------------------AATAAATTAG-CTT----TTGCTCTT----C--------------AAATTTTTATACCCTGAACCCATTGAAAATGGGAAATCAGGGTATAATGGTTTTGTGAA-------AAAGTATGTAACGGGCAGAAGGAGGCGT-GGCAGA-------CCCCACAAAG----TA--TATATATTCTTGATCAGCGCGACGAGCTGAGTCGATATAGCCCTGTC--CGTCTGTCCGTCCGTCCGTCCGT----CCGTCCGTCC--------G
droGri2 scaffold_14830:4290753-4290999 + ACTTTCGGAA-A------CT-G--GAATTACCCAGAA------------------------------------------------------------------------------------ATTAGT----------AACGTTATT-TCGAA-TTAAATTC-T-------------------------TATGT------TTT----TAA------------------------CGATTTTTATGTTTAACA---ATA------GTT-AAAAGAGGTAAACTGATGGT-TTGT-------AAAAGTTGTAATAAGGAAAAGGAATGTTATTCCTACAACAAGTTCCAGAAGC----TA--TATATATTCTTGATCAGCCTAATGAATCGAGTTGATTTAGCTATGTCTACGGCTATTCCCCCGTCAGTCTGT----CTCTC-------------C
droAna3 scaffold_13417:1605185-1605421 - CTGTAGATAA-TTACTTTTCTA--AGATAAGCGATATG----------------------------------------------------------AT-------ACC--CGGT-----------------------------ACC-TCTGG-TATA-------------------A-----------A---G------TAT----AT------AAGA---------AAGGG-TTCTTTTTATACCCTT-----GC-------------AGAGGGTATTATAATTTTGGTCA-------AAAGTGTGCAACGCAGTGAAGGAGACAT-CTCCGA-------CCCTATAAAG----TA--TATATATTCTTGATCAGGATCACCTCCTGAGTCGATATGAGCATGTC--CGTCTGTCCGTCTGTCCGTCTGT----CCGT----TT--------C
droBip1 scf7180000396714:352887-353119 - GATAA-------------TC-A--GGAT----------------------------------------------------------------------------------GTACCTATCA-TA-GGGATTTGTATATACTGCT----------------------------GTATAG-------CCTTTACTT-------------------------C--------------GAGTTTTTATACCGGGTACTCG------------TACAAGGGTATATTGTAGTCGTGTT-------AATGTATGTAACATAGAGAAGGAATAAT-CTCCGA-------CCCCAAAAAGTATTTA--TGTATATTCTTGATCAGCATCAACAGCCGAGTTGATATAGCCACGTC--CGTCTGCCCGACCGTTCGTCTGT----CCGT----AT--------G
droKik1 scf7180000302389:53011-53235 - ACAATTGAAA-T------TC-A--GA--TACAGATACA----------------------------------------------------------GA-------TAC--AAG---------A--------------------A-----GAG-GGAATTGA-T-------------------------TTCG---TCGCCGT----TGT-----------CTC----------TGTTTTTTATACCCT--------------------TGCAGGGTATTATAATTTCAGTCA-------GAAGTTTGCAACGCAGTGAAGGAGACGT-TTCCGA-------CCCTATAAAG----TA--TATATATTCTTGATCAGCATCAACAGCCGAGTCGATCTAGCCATGTC--CGTCTGTCCGTCTGTCCGTCTGT----CCATC--------------
droFic1 scf7180000454115:1057512-1057751 - CTAGTCATCA-AA--TATGC-C--GAACAAACATTATA----------------------------------------------------------GA-------A------TT-----------------------------AAC-GGAAA-TAAAATTA-T-------------------------AACAG------CGT-------------------------------TGATTTTTATACCCTT-----GCA------GAG-CAAAAGGGTATTATAATTTCAGTCA-------GAAGTTTGTAACGCAGTGAAGGAGACAC-CTCAGA-------CCCCATAAAG----TA--TATATATTCTTAATCAGCTTCACAATCTGAATCGAAATATGTATGTA--CGTCTGTCCGTCTATCCGTCTATCCTCCTGTCCTCCT--------G
droEle1 scf7180000489422:505-759 + ATAATCATTA-CTTTTATTT-AATTTATTTCCGATATT---------------------TTAAT---TATTATAATTTAATGCAAT----------TAAATTT--------------------------------------------------------CA-A-------------------------TACTT------CAA----AGG----------------------CTTGCTTTTTATACCCTT-----G-------------AAGAGGGTATTATAATTTCAGTCA-------GAAGTTTGCAACGCAGTGAAGGAGACAT-CTCCGA-------CCCTATAAAG----TA--TATATATTCTTGATCAGCATCACTAGGCGAGTCGATCTAGCCATGTC--CGTCTTTCCGTCCGTCTGTCCGTCTGTCCGTCCGTTT--------C
droRho1 scf7180000768856:66341-66571 + CTAACTTTCA-TTTTTATTT-A--AAATTA---ATATA------------------------------------A--GAATGCA------------TAAAATT---------------------------------------------------TA------A-------------------------TATAA------CA--------------------------------TAGTTTTTATACCCGTTACTCGTA------GAG-TAAAAGGGTATATTGTATTCGTGCA-------AAAGTATGTAACAGCTAGAAGGAAGCGT-TTCCGA-------CCCTATAAAG----TA--TATATATTCTTGATCAGGGTCACTAGCCGAGTCGATATAGCCATGTC--CGTCTGTCCGTCTGTCTGTCCGT----CCGT----AT--------G
droBia1 scf7180000302397:9690-9936 + TCAATCATCA-TTAAATATT-GTCT---------------------GTTGGTGTATAAGAA-----------------------ATTA----------AAATACAAGTAATTG---------G--------------------------------A------A-------------------------A--GT------C-------A------------------------GATGTGTTTATACCCGTTACACCTA------GAG-TAAAAGGGTGTACTAGATTCCTCGG-------AAAGTATGTAGTAGGTACAAGGAAGCGT-TTCCGA-------CACCTTAATGTATACTCGTACATATTCTTGATGAGGATTACTAGCCGAGTCGTTCTAGCCATGTC--CGTCTGTCCCTCTGACCGTCTGT----CCGT----TT--------G
droTak1 scf7180000413381:3276-3533 - TTAATGACGA-GTGTAAT-----------------------------------------AA---TTTTTCGTCAC--AAATG---TT---------GA-------TAT--CAG---------A--------------ACTTTT----GTATGTTGAGTTTT-T-------------------------TACCT------CGT------------------------TA--A-GAGGTGTTTATACCCGTTACTCGTA------GAG-TAAAAGGGTATATTAGATTCGTGCA-------AAAGTATGTAACAGGTAGAAGGAAGCGT-TTCCGA-------CCCTATAAAC----TA--TATATATTCTTGATCAGGATCACTAGCCGAGTCGATCTAGCCATGTC--CGTCTGTCCGTCTGTCCGTCTGT----CCGTCTGTCT--------G
droEug1 scf7180000409471:389712-389943 + TTTGTTTTCA-T-------------GAATAACAATGTATACTGTATAT--CTGTATAATAA-----------------------TATA----------AA--------------------------------------------------------------------------------------------T------TTT----AAT------------------------TTATTTTTATACCCGTTACTCGTA------GAG-TAAAAGGGTATACTAGATTCGTTGA-------AAAGTATGTAACAGATAGAAGGAAGCTT-TTGCGA-------CCCTATAAAG----TA--TATATATTCTTGATCAGGATCAATAGCGAAGTCGATTGAGCCATGTC--CGTCTGTCCGTCCGTCCGTCCGT----CCGTCC-------------
dm3 chr2L:21203608-21203829 - TTTAAAAAAA-CT-------------------CATACA----------------------------------------------------------GA-------AAC--ACGA-----AAGTAGCT--------------------------------------AAGACTGTATAG-----------AATAC------TTT----CA-------------------------ATTTTATTACACAAGTTACTCGTA------GAG-TAAAAGGGTATACTAGACTCGTTGA-------AAAGTATGTAACAGGCAGAAGGAAGCGT-TTCCAA-------CCTTACAAAG----TA--TATATATTCTTGATCAAAATCAATAGTGGAGTCGATGTAGCCATGTC--CGTCTGTACGTATGAACGTC--------------------------
droSim2 x:19784833-19785039 - GGTATT-------------C-A--AAAGTCCCCATATA----------------------------------------------------------GA-------TCC--TATT-----------------------------TTGTCCAAC-TTATTATTCT-------------------------TGC--------CGG----ATT------------------------CGCTGTTTTTACCCGTTACTCGCA------GAG-TAAAAGGGTATACTAGATTCGTTGA-------AAAGTATGTAACAGGCAGAAGGAACAGT-TTTTAA-------TTATATAAAG----T---------------------ATCAATAGCCGAGTCGAACTGCCCATGTC--CGTCTGTCTGTCCGTCCGT----------------AT--------A
droSec2 scaffold_23:824180-824390 + ACAAATATAA---------------------------------------------------------------------------------------A-------GAC--GTATTT----------------------------TT-CCATT-TGGGTGTA-TATAAAATCGGATTC-----------------------------------------C--------------TTATTTTTAATCCCGATACTCGTA------GAG-TAAAAAGGTATACTAGATACGTTGA-------AAAGTATGTAACAGGTAAAGGGAAGCGT-TTCCGA-------CCA-----------------AATATTCTTGATCAAAATCGATATCCGAGTCGATCTGGCCCTGTT--TGTCCGTCCGTCTGTCAGTCTTT------------CT--------G
droYak3 X:20411848-20412092 + TTTGTTAAAA-TTATTTTTT-A--GGACAATTTATAG-------------------------------------------------------------------------------------GAGAGA---------AATT--ATT---------------------------AGGGGATTAT-----TAA-T------TTG----TA------------------------GATATTTTTATACCCGTTACTCGTA------GAG-TAAAAGGGTATACTAGATTCGTTGA-------AAAGTATGTAACAGGCAGAAGGAAGCGT-TTCCGA-------CCATATAAAG----TA--TATATATTCTTGATCAGGATCAATAGCCGAGTCGATTTGGCCATGTC--CGTCTGTCCGTCCGTCTGTCCGT----CTGTCCGTCT--------G
droEre2 scaffold_4929:19458863-19459097 + GGTAC-------------AA-A--GTACTATCTACAGA---G-----------------AT-----------------------ACTA----------TCC----------ATC-----A-------------------AGTCATT-AA---------ATA-T-------------------------CAAAC------CTTTTTTAGT------------------------GCCTTTCTATACCCGTTGCTCGTA------GAG-TAAAAGGGTATACTAGATTCGTTGA-------AAAGTATGTAACAGACAGAAGGAAGCGT-CTCCGA-------CCATATAAAG----TA--TATATATTCTTGATCAGGATCAATAGCCGGGTCGATCTGGCCATGTC--CGTATGAACGTCCGTCTGTCCGT------------AT--------G

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CTAATCACCA-TTGGTATTC-A--GGACTACCGATATA----------------------------------------------------------GA-------AAC--GAGT-----------------------------ATT-ACAAG-TGAGTATA-T-------------------------TACAC------CTT----GGG------------------------CTCTTTTTATACCCGATACTCAAA----ATGAG-TATTGGGGTATATTAGATTTGTGGTGAAAGTGGATGTGTGTAACGTCCAGAGGGAATCGT-TTCCGA---------------AG----TA--TATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTC--TGTCTGTCCGTCCGTCCGTCTGT----CCGTCCCCTT--------CSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................AAAGTGGATGTGTGTAACGTC............................................................................................................................................21201.803600000036000
..............................................................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGTGTG...................................................................................................................................................21200.651300000031000
..............................................................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGTGTGTAACG..............................................................................................................................................26200.601201200000000
........................................................................................................................................................................................................................................................................................................................TCCAGAGGGAATCGT-TTCCGA---------------.........................................................................................................2150.4020200000000
.............................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCATCAATAGCCG..................................................................23200.3570700000000
....................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGCCGAGTC..............................................................20200.3570700000000
............................................................................................................................................................................................................................................................TCAAA----ATGAG-TATTGGGGTAT................................................................................................................................................................................21200.3060000006000
..............................................................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGTGTGT..................................................................................................................................................22200.3060600000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TC--TGTCTGTCCGTCCGTCC.............................19200.2550500000000
......................................................................................................................................................................................................................................................................................................................CGTCCAGAGGGAATCGT-TTCC..........................................................................................................................2140.2510100000000
.................................................................................................................................................................................................................................................................................................................TGTAACGTCCAGAGGGAATCG................................................................................................................................2140.2510100000000
...................................................................................................................................................................................................................................................................................................TGAAAGTGGATGTGTGTAAC...............................................................................................................................................20200.2550500000000
..........................................................................................................................................................................................................................................................................................................................................................................................TCAATAGCCGAGTCGATTGAGCC.....................................................23200.2550500000000
.............................................................................................................................................................................................................................................................................................................TGTGTGTAACGTCCAGAGGGAA...................................................................................................................................2240.2510000001000
.............................................................................................................................................................................................................................................................................................................TGTGTGTAACGTCCAGAGGG.....................................................................................................................................2040.2510000001000
................................................................................................................................................................................................................................................................................................................GTGTAACGTCCAGAGGGAATC.................................................................................................................................2140.2510100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................CGATTGAGCCATGTC--TGTC..........................................19200.2550500000000
........................................................................................................................................................................................................................................................................................................................TCCAGAGGGAATCGT-TTCCG.........................................................................................................................2050.2010100000000
...........................................................................................................................................................................................................................................................................................................GATGTGTGTAACGTCCAGAGG......................................................................................................................................2160.1710100000000
.............................................................................................................................................................................................................................................................................................TTGTGGTGAAAGTGGATGTGTGTAACG..............................................................................................................................................27200.1530300000000
................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCCGAGTCGATT..........................................................28200.1530000000300
..........................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCATCAATAGC....................................................................24200.1530000000300
...........................................................................................................................................................................................................................................................................................ATTTGTGGTGAAAGTGGAT........................................................................................................................................................19200.1020200000000
............................................................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGTGTGTAAC...............................................................................................................................................27200.1020000000020
.....................................................................................................................................................................................................................................................................................TATTAGATTTGTGGTGAAAG.............................................................................................................................................................20200.1020000000020
.......................................................................................................................................................................................................................................................................................TTAGATTTGTGGTGAAAGTGGATGT......................................................................................................................................................25200.1020000000200
....................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGCCGAGTCGATTGAGCC.....................................................29200.1020200000000
................................................................................................................................................................................................................................................................................................TGGTGAAAGTGGATGTGTG...................................................................................................................................................19200.1020000000020
..........................................................................................................................................................................................................................................................................................GATTTGTGGTGAAAGTGG..........................................................................................................................................................18200.1020200000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TC--TGTCTGTCCGTCCGTCCG............................20200.1020000000020
.........................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGCATCAA........................................................................21200.1020000000200
.....................................................................................................................................................................................................................................................................................TATTAGATTTGTGGTGAAAGTGG..........................................................................................................................................................23200.1020200000000
....................................................................................................................................................................................................................................................................................................GAAAGTGGATGTGTGTAACGT.............................................................................................................................................21200.1020000002000
................................................................................................................................................................................................................G------------------------CTCTTTTTATACCCGATAC..........................................................................................................................................................................................................20120.0810100000000
..........................................................................................................................................................................................................................................................................................GATTTGTGGTGAAAGTGGATGT......................................................................................................................................................22200.0510100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCCGTCCGTCCGTC..........................20200.0510000100000
.................................................................................................................................................................................................................................................................................................GGTGAAAGTGGATGTGTGTAAC...............................................................................................................................................22200.0510100000000
..............................................................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGTGTGTA.................................................................................................................................................23200.0510000000100
...............................................................................................................................................................................................................................................................................................GTGGTGAAAGTGGATGTGTG...................................................................................................................................................20200.0510000001000
.....................................................................................................................................................................................................................................................................ATGAG-TATTGGGGTATATTA............................................................................................................................................................................20200.0510000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................TC--TGTCTGTCCGTCCGTCCGTC..........................22200.0510010000000
..........................................................................................................................................................................................................................................TCTTTTTATACCCGATACTCAAA----A................................................................................................................................................................................................24200.0510010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GCCATGTC--TGTCTGTCCGTCC.................................21200.0510000001000
.....................................................................................................................................................................................................................................................................................TATTAGATTTGTGGTGAAAGTGGATG.......................................................................................................................................................26200.0510000000010
..........................................................................................................................................................................................................................................TCTTTTTATACCCGATACTCAAA----ATGA.............................................................................................................................................................................................27200.0510000000100
.............................................................................................................................................................................................................................................................CAAA----ATGAG-TATTGGGGTATATT.............................................................................................................................................................................23200.0510100000000
...............................................................................................................................................................................................................................................................................................GTGGTGAAAGTGGATGTGTGTAACG..............................................................................................................................................25200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TGTC--TGTCTGTCCGTCCGTCCGTCTG........................26200.0510000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................TGAGCCATGTC--TGTCTGTCCGTCC.................................24200.0510000001000
...............................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGCATCAATAGCCGAGT...............................................................24200.0510000001000
........................................................................................................................................................................................................................................................................................TAGATTTGTGGTGAAAGT............................................................................................................................................................18200.0510100000000
...................................................................................................................................................................................................................................................................................................TGAAAGTGGATGTGTGTAACGTC............................................................................................................................................23200.0510000001000
droPer2
CTTATCACCA-TTGGTATTC-A--GGACTACCGATATA----------------------------------------------------------GG-------AAC--GAGT-----------------------------ATT-ACAAG-TGAGTGTA-T-------------------------TACAC------CTT----GGG------------------------CTCTTTTTATACCCGATACTCAAA----ATGGG-TATTGGGGTATATTAGATTTGTGGTGAAAGTGGATGTGTGTAACGTCCAGAGGGAATCGT-TTCCGA-------CTCCATAAAG----TA--TATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTC--TGTCTGTCCGTCCGTCCGTCTGT----CCGTCTGTCCGTCCCCTTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................GTCGATTGAGCCATGTC--TGTC..........................................21200.459090000
.............................................................................................................................................................................................................................................................................................................................................................................................................AGCCATGTC--TGTCTGTCCGTC..................................21200.255050000
........................................................................................................................................................................................................................................................................................................................TCCAGAGGGAATCGT-TTCCG.........................................................................................................................20140.213000003
............................................................................................................................................................................................................................................................TCAAA----ATGGG-TATTGGGGTATAT..............................................................................................................................................................................23110.182020000
............................................................................................................................................................................................................................................................TCAAA----ATGGG-TATTGGGGTATA...............................................................................................................................................................................22110.182020000
.............................................................................................................................................................................................................................................................................................................TGTGTGTAACGTCCAGAGGG.....................................................................................................................................20180.112010001
.........................................................................................................................................................................................................................................................TACTCAAA----ATGGG-TATTGGGGTATATT.............................................................................................................................................................................27100.101010000
.........................................................................................................................................................................................................................................................TACTCAAA----ATGGG-TATTGGGGTAT................................................................................................................................................................................24110.091010000
............................................................................................................................................................................................................................................................TCAAA----ATGGG-TATTGGGGTATATT.............................................................................................................................................................................24110.091010000
...............................................................................................................................................................................................................................................TTATACCCGATACTCAAA----ATGGG-...........................................................................................................................................................................................23130.081010000
.........................................................................................................................................................................................................................................................................................................................CCAGAGGGAATCGT-TTCCGA-------.................................................................................................................20140.071000001
..............................................................................................................................................................................................................................................................................................................GTGTGTAACGTCCAGAGGGAAT..................................................................................................................................22140.071010000
...............................................................................................................................................................................................................................................................................................................TGTGTAACGTCCAGAGGGAA...................................................................................................................................20170.061000001
..............................................................................................................................................................................................................................................................................................................GTGTGTAACGTCCAGAGGGA....................................................................................................................................20190.051000001
.....................................................................................................................................................................................................................................................................................TATTAGATTTGTGGTGAAAG.............................................................................................................................................................20200.051000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTCTGTCCGTCCCCTTC19200.051010000
...............................................................................................................................................................................................................................................................................................GTGGTGAAAGTGGATGTGTGTAAA...............................................................................................................................................24200.051000001
....................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGCCGAGT...............................................................19200.051000001
.............................................................................................................................................................................................................................................................................................................................................................................................ATAGCCGAGTCGATTGAGCC.....................................................20200.051000010
................................................................................................................................................................................................................................................................................................................GTGTAACGTCCAGAGGGAATT.................................................................................................................................21200.051000001
............................................................................................................................................................................................................................................................TCAAA----ATGGG-TATTGGGGTAA................................................................................................................................................................................21200.051010000
........................................................................................................................................................................................................................................................................................................................TCCAGAGGGAATCGT-TTCCGT-------.................................................................................................................21200.051000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCGTCCGTCCGTCTGT----CCGTC..............26200.051010000
................................................................................................................................................................................................................................................................................................................................................................................................GCCGAGTCGATTGAGCCA....................................................18200.051000100
droWil2
ATAATTCCCAAGTACTTTGC-G--AG---------ATA----------------------------------------------------------GA-------AAT--AAAA-------ATTGAA--------------------------------------AAAACAGTATGGAACAATTC----ATGT------AGT-----------T----C--------------ACGTTGTTATACCATACACCCATA------GGG-TGAAATGGTATATTAAAGTCGCCAA-------AATGTATGTAACAGGCAGAAGGAAGCAT-CTCCGA-------CCCCACAAAG----TA--TATATATTCTTGATCAGGATCAACAACCGAGTCGATCTAGCCATGTC--CGTCTGTCCGTCCGTCCGTCCGT----CCGTCCGTCT--------GSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................TGTC--CGTCTGTCCGTCCGTCC.............................21200.45909000
..........................................................................................................................................................................................................................................................................................................................................................................................TCAACAACCGAGTCGATCTAGCCATGT.................................................27200.40800080
...................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGCAT-CTCC..........................................................................................................................24200.35707000
................................................................................................................................................................................................................................................................................................................................................................................................ACCGAGTCGATCTAGCCATGTC--CGT...........................................25200.25505000
...................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGCAT-CTCCGA-------C................................................................................................................27200.20404000
...............................................................................................................................................................................................................................................................TA------GGG-TGAAATGGTATATTAAAGTCGCC....................................................................................................................................................................28200.15300030
............................................................................................................................................................................................................................................................................................................................GAAGGAAGCAT-CTCCGA-------CCCCACAAAG----...................................................................................................27200.10202000
...........................................................................................................................................................................................................................................................................................................................AGAAGGAAGCAT-CTCCGA-------CC...............................................................................................................20200.10202000
...................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGCAT-C.............................................................................................................................21200.10202000
............................................................................................................................................................................................................................................................................................................................................................................................AACAACCGAGTCGATCTAGCCATGTC--CG............................................28200.05100010
.......................................................................................................................................................................................................................................................................GGG-TGAAATGGTATATTAAAGTCGCC....................................................................................................................................................................26200.05100010
.............................................................................................................................................................................................................................................................................................................................................................................................ACAACCGAGTCGATCTAGCCATGTC--CGT...........................................28200.05100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCGTCCGTCCGTCCGT----C..................22200.05100010
droVir3
CTGGTTTTTA-TTGTTATGT-C--AAATACAACTTATA--TG------------------------------------------------------GA-------AAT-----------------------------ATTC------------------------------------------------CTG---AAGCCGT-----------T----CACTTTGTT-----GTTGTATTTATACCCTGAACCCATTAAAAATGGG-TATAAGGGTATATTGTATTTGTGCAAAATCCAAATGTATGTAACAGGCTGAAGGAAGCAT-CTCCGA-------CCCCATAATG----T------ATATTCTTGATCAGCATCAATAGCCGAGTCGATCTAACCATGTC--CGTCTGTCTGTCCGTCCGTCCGT----CCGTATGTAT--------GSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................TCCAAATGTATGTAACAGGCTGAAGG.....................................................................................................................................2672.1415001100000000000000000000022400001021100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TCCAAATGTATGTAACAGGCTGAAGGA....................................................................................................................................2771.5711000000000000000000000000012000020041100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TCCAAATGTATGTAACAGGCTGAAG......................................................................................................................................2581.2510001000000000000000000001011110011010010000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GTATGTAACAGGCTGAAGGAAGCAT-C.............................................................................................................................2680.252000000001000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TGTATGTAACAGGCTGAAGGA....................................................................................................................................21120.172000000100000000000000000100000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TCCAAATGTATGTAACAGGCTGA........................................................................................................................................2390.111000000000000000000000000100000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TGTAACAGGCTGAAGGAAGCAT-C.............................................................................................................................23100.101000000001000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCCGAGT...............................................................23200.102000000000000000000000000000000020000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TAACAGGCTGAAGGAAGCAT-C.............................................................................................................................21120.081000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................ATGTATGTAACAGGCTGAAGG.....................................................................................................................................21120.081000000100000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GTATGTAACAGGCTGAAGGA....................................................................................................................................20120.081000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TATGTAACAGGCTGAAGGAAG..................................................................................................................................21130.081000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TGTAACAGGCTGAAGGAAGCA................................................................................................................................21140.071000000000100000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAATAGCCGAGTCGATCTAA.......................................................27180.061000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCCGAGTC..............................................................24200.051000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................ATGTC--CGTCTGTCTGTCCGTC..............................21200.051000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GTCGATCTAACCATGTC--CGTC..........................................21200.051000000000000000000000001000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................ACCCTGAACCCATTAAAAATGGG-TATAA......................................................................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TGATCAGCATCAATAGCCGAGTCG.............................................................24200.051000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................TTAAAAATGGG-TATAAGGGT..................................................................................................................................................................................20200.051000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GTC--CGTCTGTCTGTCCGTCCGTCCGT----C..................27200.051000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................................TATTGTATTTGTGCAAAATCCAAATGTA.....................................................................................................................................................28200.051000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CTAACCATGTC--CGTCTGTCTG....................................21200.051000000000000000000000000000010000000000000000000000000000000000
droMoj3
TTAATCATAA-TTTTTAATT-AATT---------------------ATAAATGTATATTTATAT---AAATATAA------------AGAATATAATAATATT---------------------------------------------------GA------A-------------------------AATAAATTAG-CTT----TTGCTCTT----C--------------AAATTTTTATACCCTGAACCCATTGAAAATGGGAAATCAGGGTATAATGGTTTTGTGAA-------AAAGTATGTAACGGGCAGAAGGAGGCGT-GGCAGA-------CCCCACAAAG----TA--TATATATTCTTGATCAGCGCGACGAGCTGAGTCGATATAGCCCTGTC--CGTCTGTCCGTCCGTCCGTCCGT----CCGTCCGTCC--------GSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................................................................................................A-------CCCCACAAAG----TA--TATATATTCTTG...................................................................................25200.70140000140
...............................................................................................................................................................................................................................................................................................................................................................................................AGCTGAGTCGATATAGCCCTG..................................................21200.255500000
...............................................................................................................................................................................................................................................................TTGAAAATGGGAAATCAGGG...................................................................................................................................................................................20200.102200000
...............................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGCGCGACGAGCTG..................................................................21200.051000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTCCGTCCGTCCGTCC.........................20200.051000001
.........................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGCGCGACG.......................................................................22200.051100000
..............................................................................................................................................................................................................................................................................................................................................................G----TA--TATATATTCTTGATCAGCG............................................................................22200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................TATATATTCTTGATCAGCGCGACG.......................................................................24200.051010000
.........................................................................................................................................................................................................................................................................................................................................GCAGA-------CCCCACAAAG----TA--TATA...........................................................................................21200.051100000
..................................................................................................................................................................................................................................................................................................................GTAACGGGCAGAAGGAGGCGT-GGCA..........................................................................................................................25200.051000001
droGri2
ACTTTCGGAA-A------CT-G--GAATTACCCAGAA------------------------------------------------------------------------------------ATTAGT----------AACGTTATT-TCGAA-TTAAATTC-T-------------------------TATGT------TTT----TAA------------------------CGATTTTTATGTTTAACA---ATA------GTT-AAAAGAGGTAAACTGATGGT-TTGT-------AAAAGTTGTAATAAGGAAAAGGAATGTTATTCCTACAACAAGTTCCAGAAGC----TA--TATATATTCTTGATCAGCCTAATGAATCGAGTTGATTTAGCTATGTCTACGGCTATTCCCCCGTCAGTCTGT----CTCTC-------------CSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
CTGTAGATAA-TTACTTTTCTA--AGATAAGCGATATG----------------------------------------------------------AT-------ACC--CGGT-----------------------------ACC-TCTGG-TATA-------------------A-----------A---G------TAT----AT------AAGA---------AAGGG-TTCTTTTTATACCCTT-----GC-------------AGAGGGTATTATAATTTTGGTCA-------AAAGTGTGCAACGCAGTGAAGGAGACAT-CTCCGA-------CCCTATAAAG----TA--TATATATTCTTGATCAGGATCACCTCCTGAGTCGATATGAGCATGTC--CGTCTGTCCGTCTGTCCGTCTGT----CCGT----TT--------CSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................GGTATTATAATTTTGGTCA-------AAAGT......................................................................................................................................................24200.459090000
........................................................................................................................................................................................................................................................................................................................................................................................................GATATGAGCATGTC--CGTCTGTCCGT...................................25200.408800000
................................................................................................................................................................................................................................................................................................................GTGCAACGCAGTGAAGGAGAC.................................................................................................................................21200.357700000
.............................................................................................................................................................................................................................................................................................................................................................................................................GAGCATGTC--CGTCTGTCCGTCTGTC..............................25200.153300000
droBip1
GATAA-------------TC-A--GGAT----------------------------------------------------------------------------------GTACCTATCA-TA-GGGATTTGTATATACTGCT----------------------------GTATAG-------CCTTTACTT-------------------------C--------------GAGTTTTTATACCGGGTACTCG------------TACAAGGGTATATTGTAGTCGTGTT-------AATGTATGTAACATAGAGAAGGAATAAT-CTCCGA-------CCCCAAAAAGTATTTA--TGTATATTCTTGATCAGCATCAACAGCCGAGTTGATATAGCCACGTC--CGTCTGCCCGACCGTTCGTCTGT----CCGT----AT--------GSizeHit CountTotal NormTotal
No Reads
droKik1
ACAATTGAAA-T------TC-A--GA--TACAGATACA----------------------------------------------------------GA-------TAC--AAG---------A--------------------A-----GAG-GGAATTGA-T-------------------------TTCG---TCGCCGT----TGT-----------CTC----------TGTTTTTTATACCCT--------------------TGCAGGGTATTATAATTTCAGTCA-------GAAGTTTGCAACGCAGTGAAGGAGACGT-TTCCGA-------CCCTATAAAG----TA--TATATATTCTTGATCAGCATCAACAGCCGAGTCGATCTAGCCATGTC--CGTCTGTCCGTCTGTCCGTCTGT----CCATC--------------SizeHit CountTotal NormTotal
No Reads
droFic1
CTAGTCATCA-AA--TATGC-C--GAACAAACATTATA----------------------------------------------------------GA-------A------TT-----------------------------AAC-GGAAA-TAAAATTA-T-------------------------AACAG------CGT-------------------------------TGATTTTTATACCCTT-----GCA------GAG-CAAAAGGGTATTATAATTTCAGTCA-------GAAGTTTGTAACGCAGTGAAGGAGACAC-CTCAGA-------CCCCATAAAG----TA--TATATATTCTTAATCAGCTTCACAATCTGAATCGAAATATGTATGTA--CGTCTGTCCGTCTATCCGTCTATCCTCCTGTCCTCCT--------GSizeHit CountTotal NormTotal
No Reads
droEle1
ATAATCATTA-CTTTTATTT-AATTTATTTCCGATATT---------------------TTAAT---TATTATAATTTAATGCAAT----------TAAATTT--------------------------------------------------------CA-A-------------------------TACTT------CAA----AGG----------------------CTTGCTTTTTATACCCTT-----G-------------AAGAGGGTATTATAATTTCAGTCA-------GAAGTTTGCAACGCAGTGAAGGAGACAT-CTCCGA-------CCCTATAAAG----TA--TATATATTCTTGATCAGCATCACTAGGCGAGTCGATCTAGCCATGTC--CGTCTTTCCGTCCGTCTGTCCGTCTGTCCGTCCGTTT--------CSizeHit CountTotal NormTotal
No Reads
droRho1
CTAACTTTCA-TTTTTATTT-A--AAATTA---ATATA------------------------------------A--GAATGCA------------TAAAATT---------------------------------------------------TA------A-------------------------TATAA------CA--------------------------------TAGTTTTTATACCCGTTACTCGTA------GAG-TAAAAGGGTATATTGTATTCGTGCA-------AAAGTATGTAACAGCTAGAAGGAAGCGT-TTCCGA-------CCCTATAAAG----TA--TATATATTCTTGATCAGGGTCACTAGCCGAGTCGATATAGCCATGTC--CGTCTGTCCGTCTGTCTGTCCGT----CCGT----AT--------GSizeHit CountTotal NormTotal
No Reads
droBia1
TCAATCATCA-TTAAATATT-GTCT---------------------GTTGGTGTATAAGAA-----------------------ATTA----------AAATACAAGTAATTG---------G--------------------------------A------A-------------------------A--GT------C-------A------------------------GATGTGTTTATACCCGTTACACCTA------GAG-TAAAAGGGTGTACTAGATTCCTCGG-------AAAGTATGTAGTAGGTACAAGGAAGCGT-TTCCGA-------CACCTTAATGTATACTCGTACATATTCTTGATGAGGATTACTAGCCGAGTCGTTCTAGCCATGTC--CGTCTGTCCCTCTGACCGTCTGT----CCGT----TT--------GSizeHit CountTotal NormTotal
No Reads
droTak1
TTAATGACGA-GTGTAAT-----------------------------------------AA---TTTTTCGTCAC--AAATG---TT---------GA-------TAT--CAG---------A--------------ACTTTT----GTATGTTGAGTTTT-T-------------------------TACCT------CGT------------------------TA--A-GAGGTGTTTATACCCGTTACTCGTA------GAG-TAAAAGGGTATATTAGATTCGTGCA-------AAAGTATGTAACAGGTAGAAGGAAGCGT-TTCCGA-------CCCTATAAAC----TA--TATATATTCTTGATCAGGATCACTAGCCGAGTCGATCTAGCCATGTC--CGTCTGTCCGTCTGTCCGTCTGT----CCGTCTGTCT--------GSizeHit CountTotal NormTotal
No Reads
droEug1
TTTGTTTTCA-T-------------GAATAACAATGTATACTGTATAT--CTGTATAATAA-----------------------TATA----------AA--------------------------------------------------------------------------------------------T------TTT----AAT------------------------TTATTTTTATACCCGTTACTCGTA------GAG-TAAAAGGGTATACTAGATTCGTTGA-------AAAGTATGTAACAGATAGAAGGAAGCTT-TTGCGA-------CCCTATAAAG----TA--TATATATTCTTGATCAGGATCAATAGCGAAGTCGATTGAGCCATGTC--CGTCTGTCCGTCCGTCCGTCCGT----CCGTCC-------------SizeHit CountTotal NormTotal
No Reads
dm3
TTTAAAAAAA-CT-------------------CATACA----------------------------------------------------------GA-------AAC--ACGA-----AAGTAGCT--------------------------------------AAGACTGTATAG-----------AATAC------TTT----CA-------------------------ATTTTATTACACAAGTTACTCGTA------GAG-TAAAAGGGTATACTAGACTCGTTGA-------AAAGTATGTAACAGGCAGAAGGAAGCGT-TTCCAA-------CCTTACAAAG----TA--TATATATTCTTGATCAAAATCAATAGTGGAGTCGATGTAGCCATGTC--CGTCTGTACGTATGAACGTC--------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................TCGTTGA-------AAAGTATGTAACAGGCAGA........................................................................................................................................26208.65173000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130000000000000000000000000000000000000000000000000000000000200000000000000000017015000000000000000000000000000000000000000000000000000000000000000000000000000012200000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TAGCCATGTC--CGTCTGTACGTATG................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CTCGTTGA-------AAAGTATGTAACAGGCAGA........................................................................................................................................2722.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000
............................................................................................................................................................................................................................................................................................CTCGTTGA-------AAAGTATGTAACAGGC...........................................................................................................................................2451.2060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000100000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TAGCCATGTC--CGTCTGTACGTATGAA..............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................AAAATCAATAGTGGAGTCGATGTAGC......................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TAGCCATGTC--CGTCTGTACGTATGA...............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................CATGTC--CGTCTGTACGTATGAACG............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CTCGTTGA-------AAAGTATGTAACAGG............................................................................................................................................2360.8350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CTCGTTGA-------AAAGTATGTAACAGGCA..........................................................................................................................................2550.8040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TATACTAGACTCGTTGA-------AAAGT......................................................................................................................................................2240.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.............................................................................................................................................................................................................................................................CGTA------GAG-TAAAAGGGTATACTAGA..........................................................................................................................................................................24200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000800000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................AAAGGGTATACTAGACTCGTT....................................................................................................................................................................2160.5030000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TTGA-------AAAGTATGTAACAGGCAGAA.......................................................................................................................................24200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATGTAGCCATGTC--CG............................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TTGA-------AAAGTATGTAACAGGCAGAAG......................................................................................................................................25200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TCGATGTAGCCATGTC--CGTCT.........................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................................................................................................................................................................................................................TTGA-------AAAGTATGTAACAGGCAGAAGGA....................................................................................................................................27200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TATACTAGACTCGTTGA-------AAAGTATG...................................................................................................................................................2540.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................AAGTATGTAACAGGCAGAAGGAAG..................................................................................................................................24200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000
................................................................................................................................................................................................................................................................................................TTGA-------AAAGTATGTAACAGGCAGAAGG.....................................................................................................................................26200.4080000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000003000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TATACTAGACTCGTTGA-------AAAG.......................................................................................................................................................2150.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................GGCAGAAGGAAGCGT-TTCCAA-------CC...............................................................................................................2350.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
....................................................................................................................................................................................................................................................................................................................AACAGGCAGAAGGAAGCGT-TTCC..........................................................................................................................23200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050010000000000010000000000
...............................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAGCGT-T.............................................................................................................................25200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
......................................................................................................................................................................................................................................................................................ACTAGACTCGTTGA-------AAAGTA.....................................................................................................................................................2060.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................CGTA------GAG-TAAAAGGGTATACTAGACT........................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................CGTA------GAG-TAAAAGGGTATACTAG...........................................................................................................................................................................23200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TACTCGTA------GAG-TAAAAGGGTATAC..............................................................................................................................................................................24200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................TCGTTGA-------AAAGTATGTAACAGGCAG.........................................................................................................................................25200.3060000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000
...........................................................................................................................................................................................................................................................................TAAAAGGGTATACTAGACTCGTTGA-------...........................................................................................................................................................2540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................AAGTATGTAACAGGCAGAAGGAAGCGT-..............................................................................................................................27200.2550000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................AACAGGCAGAAGGAAGCGT-TT............................................................................................................................21200.2550000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TACTAGACTCGTTGA-------AAAGTA.....................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGCGT-T.............................................................................................................................21200.2550000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000
.............................................................................................................................................................................................................................................................................................TCGTTGA-------AAAGTATGTAACAGGC...........................................................................................................................................23200.2550000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.....................................................................................................................................................................................................................................................................................TACTAGACTCGTTGA-------AAAGT......................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GTATACTAGACTCGTTGA-------AAAGTAT....................................................................................................................................................2540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TATACTAGACTCGTTGA-------AAAGTAT....................................................................................................................................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................AACAGGCAGAAGGAAGCGT-TTCCA.........................................................................................................................2480.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000000
.....................................................................................................................................................................................................................................................................................TACTAGACTCGTTGA-------AAAGTATGT..................................................................................................................................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................AAGGGTATACTAGACTCGTTGA-------AA.........................................................................................................................................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................AAAAGGGTATACTAGACTCGT.....................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TGA-------AAAGTATGTAACAGGCAGAAGGA....................................................................................................................................26200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CTCGTTGA-------AAAGTATGTAACAGGCAGAATC.....................................................................................................................................3050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAAGCGT-TTC...........................................................................................................................25200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000003
......................................................................................................................................................................................................................................................................................ACTAGACTCGTTGA-------AAAGTAT....................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGCGT-TTCCAA-------C................................................................................................................2760.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................................................................................................................................................................................................................................................................TCGTTGA-------AAAGTATGTAACAGGCAGAA.......................................................................................................................................27200.1530000000000000000000000000000000000000000000000000010000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................AACAGGCAGAAGGAAGCGT-..............................................................................................................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000002000000000000000
...........................................................................................................................................................................................................................................................................................................AAAGTATGTAACAGGCAGAAG......................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
.............................................................................................................................................................................................................................................................................................TCGTTGA-------AAAGTATGTAACAGGCAGAAG......................................................................................................................................28200.1530000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGAAGCGT-T.............................................................................................................................26200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
.....................................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGAAGCGT-TTC...........................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TACTCGTA------GAG-TAAAAGGGTATACTA............................................................................................................................................................................26200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
....................................................................................................................................................................................................................................................................................................................AACAGGCAGAAGGAAGCGT-TTCCAA-------C................................................................................................................2680.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGAAGCGT-TTCCAA-------.................................................................................................................2480.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................AG-TAAAAGGGTATACTAGACT........................................................................................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................CAGAAGGAAGCGT-TTCCAA-------CC...............................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................GGCAGAAGGAAGCGT-TTCCAA-------.................................................................................................................2190.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
........................................................................................................................................................................................................................................................................................................................GGCAGAAGGAAGCGT-TTCCA.........................................................................................................................2090.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TCGTA------GAG-TAAAAGGGTATACTAG...........................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................GCAGAAGGAAGCGT-TTCCA.........................................................................................................................19100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................................................................................................................................................................................................AAGTATGTAACAGGCAGAAGGAAGCG................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000
.............................................................................................................................................................................................................................................................................................TCGTTGA-------AAAGTATGTAACAGGCA..........................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................AGTATGTAACAGGCAGAAGG.....................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.............................................................................................................................................................................................................................................................CGTA------GAG-TAAAAGGGTATACT.............................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.......................................................................................................................................................................................................................................................................................................................AGGCAGAAGGAAGCGT-TTCC..........................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CGTTGA-------AAAGTATGTAACAGGC...........................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................GA-------AAAGTATGTAACAGGCAGAAGGAA...................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................................................................................................................................................................................................................TTGA-------AAAGTATGTAACAGGCAG.........................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TTACTCGTA------GAG-TAAAAGGGT..................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAAGCGT-T.............................................................................................................................23200.1020000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................................................................................................................................................................................................................................................GGCAGAAGGAAGCGT-TTCCAC-------.................................................................................................................21110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................G-TAAAAGGGTATACTAGACG........................................................................................................................................................................20150.0710000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TGA-------AAAGTATGTAACAGGCAGAAG......................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................AGTATGTAACAGGCAGAAGGAAGCGT-T.............................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................ACTCGTA------GAG-TAAAAGGG...................................................................................................................................................................................18200.0510000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................ATGTAACAGGCAGAAGGAAG..................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................TA------GAG-TAAAAGGGTATACTAGA..........................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGAA...................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GTAACAGGCAGAAGGAAGCGT-TT............................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................AGTATGTAACAGGCAGAAGGAAGC.................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................GA-------AAAGTATGTAACAGGCAGA........................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................ACTCGTA------GAG-TAAAAGGGTAT................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................TTACTCGTA------GAG-TAAAAGGGTA.................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAAGCGT-TTCC..........................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................................................................................................................................................................................A------GAG-TAAAAGGGTATACTAGA..........................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GTAACAGGCAGAAGGAAGCGT-T.............................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................A-------AAAGTATGTAACAGGCAGAAGGA....................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TTACTCGTA------GAG-TAAAAGGGTATACTA............................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TCGTA------GAG-TAAAAGGGTA.................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................GTTGA-------AAAGTATGTAACAGGCAGA........................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CGTTGA-------AAAGTATGTAACAGGCAGA........................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................A-------AAAGTATGTAACAGGCAGA........................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................ATGTAACAGGCAGAAGGA....................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TACTCGTA------GAG-TAAAAGGGTA.................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................GTTACTCGTA------GAG-TAAAAGGG...................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGAAGCGT-TTCC..........................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGAAGCGT-..............................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TTGA-------AAAGTATGTAACAGGCAGA........................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................................TACTCGTA------GAG-TAAAAGGGTATACT.............................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAAGCGT-..............................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................TCGTA------GAG-TAAAAGGGTATACTAGA..........................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................AGTATGTAACAGGCAGAAGGAAGCGT-..............................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................GTAACAGGCAGAAGGAAGCGT-..............................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................TGA-------AAAGTATGTAACAGGCAGA........................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CTCGTA------GAG-TAAAAGGGTATA...............................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AAAGTATGTAACAGGCAGAAGGAAGCGT-..............................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGCGT-..............................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AAAGTATGTAACAGGCAGAA.......................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................CTCGTA------GAG-TAAAAGGGT..................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TGA-------AAAGTATGTAACAGGCAGAA.......................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................AAGTATGTAACAGGCAGAAGG.....................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AAAGTATGTAACAGGCAGAAGGA....................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TCGTA------GAG-TAAAAGGGTATACT.............................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
droSim2
GGTATT-------------C-A--AAAGTCCCCATATA----------------------------------------------------------GA-------TCC--TATT-----------------------------TTGTCCAAC-TTATTATTCT-------------------------TGC--------CGG----ATT------------------------CGCTGTTTTTACCCGTTACTCGCA------GAG-TAAAAGGGTATACTAGATTCGTTGA-------AAAGTATGTAACAGGCAGAAGGAACAGT-TTTTAA-------TTATATAAAG----T---------------------ATCAATAGCCGAGTCGAACTGCCCATGTC--CGTCTGTCTGTCCGTCCGT----------------AT--------ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................TAAAAGGGTATACTAGATTCGTTGA-------AA.........................................................................................................................................................27203.7074000000740000000000
...................................................................................................................................................................................................................................................................................................A-------AAAGTATGTAACAGGCAGAAGGAACA.................................................................................................................................2723.50700000001101040000
............................................................................................................................................................................................................................................................................................................................................................................................................TGCCCATGTC--CGTCTGTCTGTCCGTC..............................2613.00300200000100000000
...................................................................................................................................................................................................................................................................................................A-------AAAGTATGTAACAGGCAGAAGGAA...................................................................................................................................25202.8557000000000057000000
...............................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAACAGT-T.............................................................................................................................2522.50500020011001000000
...............................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAACAGT-..............................................................................................................................2422.00400000001111000000
...................................................................................................................................................................................................................................................................................................A-------AAAGTATGTAACAGGCAGAAGG.....................................................................................................................................23201.5531000000000031000000
...................................................................................................................................................................................................................................................................................................A-------AAAGTATGTAACAGGCAGAAGGAAC..................................................................................................................................2631.33400000001000030000
...............................................................................................................................................................................................................................................................................AGGGTATACTAGATTCGTTGA-------AAAGT......................................................................................................................................................26201.3026000000000021050000
............................................................................................................................................................................................................................................................................................TTCGTTGA-------AAAGTATGTAACAGGCAGA........................................................................................................................................27201.3026000000026000000000
..........................................................................................................................................................................................................................................................................................................................CAGAAGGAACAGT-TTT...........................................................................................................................1611.00100000000001000000
....TT-------------C-A--AAAGTCCCCATATA----------------------------------------------------------GA-------TCC--TA......................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TGCCCATGTC--CGTCTGTCTGTCCGTCCGT----------------A..........3011.00100000010000000000
............................................................................................................................................................................................................................................................................AAAAGGGTATACTAGATTCGTTGA-------A..........................................................................................................................................................25200.8517000000017000000000
.............................................................................................................................................................................................................................................................................................................AGTATGTAACAGGCAGAAGGAAC..................................................................................................................................2330.67200000200000000000
..............................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGAACAGT-..............................................................................................................................2520.50100000000001000000
...............................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAACAGT-TT............................................................................................................................2620.50100000000000010000
...............................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAACAG................................................................................................................................2320.50100000000001000000
...................................................................................................................................................................................................................................................................................................A-------AAAGTATGTAACAGGCAGAAGGAACAG................................................................................................................................2820.50100000010000000000
..............................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGAACAGT-TT............................................................................................................................2720.50100000000000010000
..................................................................................................................................................................................................................................................................................................................GTAACAGGCAGAAGGAACAGT-TT............................................................................................................................2320.50100000000000010000
........................................................................................................................................................................................................................................................................AG-TAAAAGGGTATACTAGATTCGTTGA-------A..........................................................................................................................................................28200.45900000009000000000
...............................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAC..................................................................................................................................2130.33100000000001000000
............................................................................................................................................................................................................................................................................................TTCGTTGA-------AAAGTATGTAACAGGCAG.........................................................................................................................................26200.30600000000060000000
.........................................................................................................................................................................................................................................................................G-TAAAAGGGTATACTAGATTCGT.....................................................................................................................................................................23200.25500000000005000000
................................................................................................................................................................................................................................................................................................TTGA-------AAAGTATGTAACAGGCAGAAGGA....................................................................................................................................27200.25500000000500000000
............................................................................................................................................................................................................................................................TCGCA------GAG-TAAAAGGGTATACTAG...........................................................................................................................................................................24140.21300010000002000000
...................................................................................................................................................................................................................................................................................................A-------AAAGTATGTAACAGGCAGAAGGA....................................................................................................................................24200.20400010000000003000
.............................................................................................................................................................................................................................................................................................................................................................AG----T---------------------ATCAATAGCCGAGTCGA............................................................2050.20100000000010000000
...............................................................................................................................................................................................................................................................CA------GAG-TAAAAGGGTATACTAGATTCGT.....................................................................................................................................................................27110.18200000000101000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCCGTCCGT----------------AT--------A1860.17100000000010000000
..............................................................................................................................................................................................................................................................................AAGGGTATACTAGATTCGTTGA-------AAAGT......................................................................................................................................................27200.15300000000000030000
..............................................................................................................................................................................................................................................................................AAGGGTATACTAGATTCGTTGA-------A..........................................................................................................................................................23200.15300000030000000000
...........................................................................................................................................................................................................................................................................TAAAAGGGTATACTAGATTCGTTGA-------A..........................................................................................................................................................26200.15300000000030000000
............................................................................................................................................................................................................................................................TCGCA------GAG-TAAAAGGGTATACTAGA..........................................................................................................................................................................25140.14200010000001000000
.............................................................................................................................................................................................................................................................CGCA------GAG-TAAAAGGGTATACTAGA..........................................................................................................................................................................24140.14200000000200000000
............................................................................................................................................................................................................................................................TCGCA------GAG-TAAAAGGGTATACTAGAT.........................................................................................................................................................................26140.14200000000002000000
.....................................................................................................................................................................................................................................................CCGTTACTCGCA------GAG-TAAAAGGGT..................................................................................................................................................................................2480.13100000000001000000
.......................................................................................................................................................................................................................................................GTTACTCGCA------GAG-TAAAAGGGT..................................................................................................................................................................................2290.11100000000001000000
.....................................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGAAC..................................................................................................................................1590.11100000000001000000
.........................................................................................................................................................................................................................................................................................AGATTCGTTGA-------AAAG.......................................................................................................................................................15200.10200000000002000000
...............................................................................................................................................................................................................................................................................AGGGTATACTAGATTCGTTGA-------AAAGTA.....................................................................................................................................................27200.10200000000020000000
........................................................................................................................................................................................................................................................................AG-TAAAAGGGTATACTAGATTCGTTG...................................................................................................................................................................26200.10200000000000020000
...................................................................................................................................................................................................................................................................................................A-------AAAGTATGTAACAGGCAGAAGGAACT.................................................................................................................................27100.10100000010000000000
.........................................................................................................................................................................................................................................................................G-TAAAAGGGTATACTAGATTCGTTGA-------AA.........................................................................................................................................................28200.10200000002000000000
.....................................................................................................................................................................................................................................................CCGTTACTCGCA------GAG-T..........................................................................................................................................................................................16100.10100000000001000000
..................................................................................................................................................................................................................................................................................GTATACTAGATTCGTT....................................................................................................................................................................16200.10200000000002000000
.............................................................................................................................................................................................................................................................................................................AGTATGTAACAGGCAGAAGGAACT.................................................................................................................................24120.08100000001000000000
.........................................................................................................................................................................................................................................................TACTCGCA------GAG-TAAAAGGGTATACTAG...........................................................................................................................................................................27120.08100000000001000000
...............................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAACT.................................................................................................................................22130.08100000000001000000
...............................................................................................................................................................................................................................................................CA------GAG-TAAAAGGGTATACTAGATT........................................................................................................................................................................24140.07100000000001000000
..............................................................................................................................................................................................................................................................GCA------GAG-TAAAAGGGTATACTAGA..........................................................................................................................................................................23140.07100000000001000000
............................................................................................................................................................................................................................................................TCGCA------GAG-TAAAAGGGTATACTA............................................................................................................................................................................23150.07100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................CAATAGCCGAGTCGAACT.........................................................18160.06100100000000000000
...............................................................................................................................................................................................................................................................CA------GAG-TAAAAGGGTATA...............................................................................................................................................................................17190.05100000000001000000
.............................................................................................................................................................................................................................................................CGCA------GAG-TAAAAGGGTA.................................................................................................................................................................................17190.05100000000001000000
...............................................................................................................................................................................................................................................................CA------GAG-TAAAAGGGTATACT.............................................................................................................................................................................19190.05100000000001000000
..............................................................................................................................................................................................................................................................................AAGGGTATACTAGATTCGTTGA-------AAAGTA.....................................................................................................................................................28200.05100000010000000000
............................................................................................................................................................................................................................................................................AAAAGGGTATACTAGATTCGTTGA-------...........................................................................................................................................................24200.05100000001000000000
................................................................................................................................................................................................................................................................................GGGTATACTAGATTCGTTGA-------AAAGT......................................................................................................................................................25200.05100000001000000000
.......................................................................................................................................................................................................................................................................................CTAGATTCGTTGA-------AAAGTATGTAAC...............................................................................................................................................25200.05100000010000000000
...........................................................................................................................................................................................................................................................................................ATTCGTTGA-------AAAGTATGTAACAGGC...........................................................................................................................................25200.05100000010000000000
.................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAA...................................................................................................................................18200.05100000001000000000
.............................................................................................................................................................................................................................................................................AAAGGGTATACTAGATTCGTTGA-------AAA........................................................................................................................................................26200.05100000000001000000
...............................................................................................................................................................................................................................................................................AGGGTATACTAGATTCGTTGA-------AA.........................................................................................................................................................23200.05100000000001000000
.........................................................................................................................................................................................................................................................................G-TAAAAGGGTATACTAGATTCGTTGA-------A..........................................................................................................................................................27200.05100000000000010000
.....................................................................................................................................................................................................................................................................................TACTAGATTCGTTGA-------AAAGTATGT..................................................................................................................................................24200.05100000000010000000
...................................................................................................................................................................................................................................................................................................A-------AAAGTATGTAACAGGCAGAAG......................................................................................................................................22200.05100000000000001000
............................................................................................................................................................................................................................................................................AAAAGGGTATACTAGATTCGTTGA-------AAAGTA.....................................................................................................................................................30200.05100000001000000000
...............................................................................................................................................................................................................................................................................AGGGTATACTAGATTCGTTGA-------...........................................................................................................................................................21200.05100000010000000000
...........................................................................................................................................................................................................................................................................................................AAAGTATGTAACAGGCAGAAGGAA...................................................................................................................................24200.05100000000100000000
..........................................................................................................................................................................................................................................................................................................................................................................................TCAATAGCCGAGTCGAAA..........................................................18200.05100000001000000000
...................................................................................................................................................................................................................................................................................TATACTAGATTCGTTGA-------AAAGTAT....................................................................................................................................................24200.05100000000100000000
...........................................................................................................................................................................................................................................................................TAAAAGGGTATACTAGATTCGTTGA-------AAAC.......................................................................................................................................................29200.05100000010000000000
.............................................................................................................................................................................................................................................................................................TCGTTGA-------AAAGTATGTAACAGGCA..........................................................................................................................................24200.05100000000001000000
droSec2
ACAAATATAA---------------------------------------------------------------------------------------A-------GAC--GTATTT----------------------------TT-CCATT-TGGGTGTA-TATAAAATCGGATTC-----------------------------------------C--------------TTATTTTTAATCCCGATACTCGTA------GAG-TAAAAAGGTATACTAGATACGTTGA-------AAAGTATGTAACAGGTAAAGGGAAGCGT-TTCCGA-------CCA-----------------AATATTCTTGATCAAAATCGATATCCGAGTCGATCTGGCCCTGTT--TGTCCGTCCGTCTGTCAGTCTTT------------CT--------GSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TTTGTTAAAA-TTATTTTTT-A--GGACAATTTATAG-------------------------------------------------------------------------------------GAGAGA---------AATT--ATT---------------------------AGGGGATTAT-----TAA-T------TTG----TA------------------------GATATTTTTATACCCGTTACTCGTA------GAG-TAAAAGGGTATACTAGATTCGTTGA-------AAAGTATGTAACAGGCAGAAGGAAGCGT-TTCCGA-------CCATATAAAG----TA--TATATATTCTTGATCAGGATCAATAGCCGAGTCGATTTGGCCATGTC--CGTCTGTCCGTCCGTCTGTCCGT----CTGTCCGTCT--------GSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................TTGGCCATGTC--CGTCTGTCCGTCC.................................24200.7515015000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TGGCCATGTC--CGTCTGTCCGTCCGTCT.............................27200.7014014000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GCCATGTC--CGTCTGTCCGTCC.................................21200.15303000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTGGCCATGTC--CGTCTGTCCGTCCGTC..............................27200.10200020000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GTCGATTTGGCCATGTC--CGTCTGT.......................................24200.10200000020000
.........................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGCCATGTC--CGTCTGTCC.....................................22200.10200200000000
.............................................................................................................................................................................................................................................................................................TCGTTGA-------AAAGTATGTAACAGGC...........................................................................................................................................23200.10202000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCGTCCGTCTGTCCGT----CTGTC..............26200.10202000000000
............................................................................................................................................................................................................................................................................AAAAGGGTATACTAGATTC.......................................................................................................................................................................19200.10200200000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TTTGGCCATGTC--CGTCTGTCCGTCCG................................26200.05100100000000
...........................................................................................................................................................................................................................................................CTCGTA------GAG-TAAAAGGGTATACTAGATT........................................................................................................................................................................28200.05101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTGTCCGTCCGTCTGTCCGT----C..................24200.05100100000000
.........................................................................................................................................................................................................................................................................................................................GCAGAAGGAAGCGT-TTCCGA-------.................................................................................................................20200.05101000000000
....................................................................................................................................................................................................................................................................................................................................................................................TCAGGATCAATAGCCGAGTCGATTTGGC......................................................28200.05101000000000
........................................................................................................................................................................................................................................................................................................................................................................ATATATTCTTGATCAGGATCAATAGCCGA.................................................................29200.05100000010000
..............................................................................................................................................................................................................................................................................................................................................................G----TA--TATATATTCTTGATCAGGATCAATA......................................................................28200.05100000010000
.......................................................................................................................................................................................................................................................................................................................AGGCAGAAGGAAGCGT-TTCC..........................................................................................................................20200.05100000010000
........................................................................................................................................................................................................................................................................................................................................TTCCGA-------CCATATAAAG----TA--TATATATTCT.....................................................................................28200.05101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCGTCCGTCTGTCCGT----CTGTCC.............25200.05100010000000
.............................................................................................................................................................................................................................................................CGTA------GAG-TAAAAGGGTATACTAGATTC.......................................................................................................................................................................27200.05101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GATTTGGCCATGTC--CGTCTG........................................20200.05101000000000
....................................................................................................................................................................................................................................................................................................................................................................A--TATATATTCTTGATCAGGA............................................................................20200.05100000010000
..............................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGAAGCGT-..............................................................................................................................25200.05100000010000
.........................................................................................................................................................................................................................................ATATTTTTATACCCGTTACT.........................................................................................................................................................................................................20200.05101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATTTGGCCATGTC--CGTCTGTC......................................27200.05100100000000
droEre2
GGTAC-------------AA-A--GTACTATCTACAGA---G-----------------AT-----------------------ACTA----------TCC----------ATC-----A-------------------AGTCATT-AA---------ATA-T-------------------------CAAAC------CTTTTTTAGT------------------------GCCTTTCTATACCCGTTGCTCGTA------GAG-TAAAAGGGTATACTAGATTCGTTGA-------AAAGTATGTAACAGACAGAAGGAAGCGT-CTCCGA-------CCATATAAAG----TA--TATATATTCTTGATCAGGATCAATAGCCGGGTCGATCTGGCCATGTC--CGTATGAACGTCCGTCTGTCCGT------------AT--------GSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................................TTGA-------AAAGTATGTAACAGACAGAAGGA....................................................................................................................................27120.1720000002
..........................................................................................................................................................................................................................................................GCTCGTA------GAG-TAAAAGGGT..................................................................................................................................................................................19170.1220100100
............................................................................................................................................................................................................................................................................................TTCGTTGA-------AAAGTATGTAACAGACAGAAG......................................................................................................................................29110.0910000001
............................................................................................................................................................................................................................................................................................TTCGTTGA-------AAAGTATGTAACAGACAGA........................................................................................................................................27130.0810000001
...............................................................................................................................................................................................................................................................TA------GAG-TAAAAGGGTATACTAGATTCGT.....................................................................................................................................................................27200.0510000010
.................................................................................................................................................................................................................................................................................................TGA-------AAAGTATGTAACAGACAA.........................................................................................................................................21200.0510000010
.........................................................................................................................................................................................................................................................................G-TAAAAGGGTATACTAGATTCGT.....................................................................................................................................................................23200.0510000100
..............................................................................................................................................................................................................................................................................AAGGGTATACTAGATTCGTTGA-------...........................................................................................................................................................22200.0510000100

Generated: 05/17/2015 at 11:17 PM