ID:

dps_748

 Coordinate:

2:23559536-23559686 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.0 -12.3 -12.3

Flybase annnotation

exon [Dpse\GA16002:7]; CDS [Dpse\GA16002-cds]; intron [Dpse\GA16002-in]; intron [Dpse\GA16002-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GTGCGATCAAAACAAGGACTGCGACGATGGCAGCGATGAGGCCCAGTGCAGTAAGCCTTCAATCATATCTAAGTTTCTGTTTGCTGCAACTCTTTGTTTTGGTGTTGGTGAAATCTATCTATCGTTCTCTATCTGCCTTTCCTGCTACGTTATATCTGTTGACACACATTTGTATTTCTCTGAAAGTTGTGTAATTCCACACTTACCTACTACTCGTATATCCTACCAATAAAGCACAAATATTTACGCAG
**************************************************...........................((.((((.((((((.((......(((((..((.((..........(((.....................))).........)).))..)))))...........)).)))))))))).....))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
 M062
head
 SRR902012
CNS imaginal disc
 V112
male body		 M059
embryo
 GSM444067
head
......................................................................GAGTTTCTGTTTGCAGCAA.................................................................................................................................................................. 19 2 2 1.50 3 3 0 0 0 0 0 0
..................................................................................................................CTATCTATCGTTCTCTATCTGCC.................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0
..........AACAAGGACTGCGACGATG.............................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0
..............AGGACTGCGACGATGGCAGCGATGAG................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0
.............AAGGACTGCGACGATGGCA........................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
......................GACGATGGCAGCGATGAGGCCCA.............................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0
..........AACAAGGACTGCGACGAT............................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0
..........AACAAGGACTGCGACGATGGC............................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0
.......................ACGATGGCAGCGATGAGGC................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................AGTTTCTGTTTGCAGCAAG................................................................................................................................................................. 19 2 6 0.83 5 3 0 0 0 2 0 0
.......................................................................AGTTTCTGTTTGCAGCAA.................................................................................................................................................................. 18 1 2 0.50 1 1 0 0 0 0 0 0
..............................................................................................TGTTTTGGTGTTTGTGAA........................................................................................................................................... 18 1 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................................................TCTATCGTTCTCTAGCTGTCT................................................................................................................. 21 2 2 0.50 1 0 1 0 0 0 0 0
......................................................................GAGTTTCTGTTTGCAGCAAG................................................................................................................................................................. 20 3 19 0.26 5 3 0 0 0 1 0 1
.......................................................................AGTTTCTGTTTGCAGCGA.................................................................................................................................................................. 18 2 13 0.23 3 3 0 0 0 0 0 0
...........ACAATCACTGCGAGGATGGC............................................................................................................................................................................................................................ 20 3 6 0.17 1 1 0 0 0 0 0 0
....GATCGAAACAAGTACTACGAC.................................................................................................................................................................................................................................. 21 3 7 0.14 1 0 0 0 0 0 1 0
...............................................................................................GTTTAGGTGTTGGCGTAATC........................................................................................................................................ 20 3 8 0.13 1 0 0 0 0 1 0 0
............................................................................................TTTGTGTTGGTGTTGTTGAA........................................................................................................................................... 20 2 19 0.11 2 2 0 0 0 0 0 0
.....................................................................CGAGTTTCTGTTTGCAGCAA.................................................................................................................................................................. 20 3 10 0.10 1 1 0 0 0 0 0 0
............................................................................................GTCGTTTTGGTGTTGGTAAAA.......................................................................................................................................... 21 3 20 0.05 1 1 0 0 0 0 0 0
........................................................................................................................................................................TTTATATTTCTCAGAAGGTT............................................................... 20 3 20 0.05 1 1 0 0 0 0 0 0

Anti-sense strand reads

CACGCTAGTTTTGTTCCTGACGCTGCTACCGTCGCTACTCCGGGTCACGTCATTCGGAAGTTAGTATAGATTCAAAGACAAACGACGTTGAGAAACAAAACCACAACCACTTTAGATAGATAGCAAGAGATAGACGGAAAGGACGATGCAATATAGACAACTGTGTGTAAACATAAAGAGACTTTCAACACATTAAGGTGTGAATGGATGATGAGCATATAGGATGGTTATTTCGTGTTTATAAATGCGTC
**************************************************...........................((.((((.((((((.((......(((((..((.((..........(((.....................))).........)).))..)))))...........)).)))))))))).....))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V112
male body		 M059
embryo
 M040
female body
.................................................TCATTGGGAAGTTAGTAAA....................................................................................................................................................................................... 19 2 1 1.00 1 1 0 0
.......................................................................................................................................................................................................................AAAATGGGATGGTTATTTCGT............... 21 3 3 0.33 1 0 1 0
.....................................................................................................................................................................................................GTGTGAATTGAAGATGTG.................................... 18 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:23559486-23559736 + dps_748 GTGCGATCAAAACAAGGACTGCGACGATGGCAGCGATGAGGCCCAGTGCAGTAAGCCTTCAAT-C----------ATA-------TCTAAGTTTCTGT--TTGC----TGC-----------AACTCTTTGT----------TTTGGT------------------------GTTGGTGAAATCTA----------------------TCTATC--------GT-----TCT---------------------------------------------------------------------------------------------------CT--------------ATCTGCCTTTCCTGCTACGT------TATA-----T--------------------------------------------------CTGT-T-------------------------------GACACA--CATT-TGTATTTCTCTG-AAAGTTGTGT--AATTCCACACTTACCTA-CTAC--T-CGTATATC-------------------------------------------CTACCAATAAAGCACAAATATTTACG-CA--------G
droPer2 scaffold_11378:1-251 + --------------AGGACTGCGACGATCGCAGCGATGAGGCCCAGTGCAGTAAGCCTTCA--------AT----CAT------CTCTAGGTTTCTGT--TTGC----TGC-----------AACTCTTTGT----------TTTGGT------------------------GTTGGTGAAATCTA----------------------TCTATC--------GT---------------------------------------------------------------T-TG-CTA--TCTGC---------------------------------------------------CTTCCCTGCTACGT------TATATT--------AC-------------------------------------------------A------------------TGTATCCTCTGTTGACACA--CATGTTGTATTTCTCTG-AAAGTTGTGT--AATTCCACACTTACCTA-CTAC--TGCGTATATC-------------------------------------------CTACCAATAAAGCACAAATATTTACG-CA--------G
droWil2 scf2_1100000004943:14507152-14507550 + GTGTGATCAGAATAAAGATTGCAGTGATGGCAGCGATGAGGCCATGTGTAGTAAGCAAAAA-A-A--AAAA----ATTGAAATTCTTTAGAAATTCTTTAAATC----TGT-----------G-----TTGT----------AT-GGT------------------------GTTGGA--------TATACT------TATTATACTTTTATAT--------TT-----TGTATAT----------T-TA---TTGCTTATGTGTACCTACTTAT-GTTGGTGTGTGT------A--TGTTTAC----------CAA-------ACTTATGTTTTTATGTGCCTCATATCCTGGTTCCCTGCTAAGTAGACACAATACTACAT--------------------------------------------------ATAC-ATACATACATATGTATGTAT-------------GTATA--------------CCCTG-TAAACAGTGG--TCCCTTACAATAACGTT-CCTT--A-CATATTCCCCACCTAACTATATATAGAGTTTGAACTACCTAAAGCCCCCAAAAGGCAATAAAACACAAATATTTACG-CA--------C
droVir3 scaffold_12855:6961400-6961650 - dvi_4251 GTGTGATCAGAACAAAGATTGCAGCGATGGCAGCGATGAGGCCACGTGCAGTAAGCCATAT-TTC--GCAA----ATT------TCTAATCTTAA-------GC----TGT-----------AACTGTTTGTAAGCTGTAACTAAAACTCTAGTTGTTGTAGTGTGCT------TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT------TGTG-----TGTGTACATACTTCAGCT-------------------TGCTGGAGATAAGTATGC-----------------------------------TACA--CTTT-------GCTACA-AGAATTGTGC--AAT-----ACTTACCTA-AACAATA-CA-------------------------------------------------CATGCAATAAAGCACAAATATTTACA-CA--------C
droMoj3 scaffold_6540:25653582-25653864 + dmo_2060 GTGCGATCAGAGCAAAGATTGCAGCGATGGCAGCGACGAGGCCACTTGTAGTAAGCCAGAC-T-T--AAAGAAATGTT------TCCAAACCTAA------CTG----TGC-----------T-TTGCTTGTACACTGTAACTAAAGC------------------------TTTAGC--------TGTAAT------AGT----------------------------GTGTGCTCTAGTGCTCTCTCT---CTG-----------------------AGTATGTGT-GC-GTG--TGTGTTT----------GTACATACTTCAT-----------------------------------------------------------------------CT-------------------TGTTGCCCATAAGTATGA-----------------------------------TACA--CATT-------GCTGCA-AGTATTGTGT--AAT-----ACTTACCTA-AACAATA-CA-------------------------------------------------CTTGCAATAGAGCACAAATATTTACA-CA--------C
droGri2 scaffold_15074:5840821-5841129 + GTGTGATCAGAGCAAAGATTGCAGCGATGGCTCCGATGAGGCCACGTGCAGTAAGCCATCA-A-A--TTTT----AAT------CTCTA------TTT--TAAC----TG----------------------------TAACTAAAGC------------------------CCTGTC--------GGCAGT------AGTAT-CGTAATTCTCTTATGTATTTAGTTTA-------------------G---CTGCTCT--------------C-TG-TGTATTTGT-GT-GTG--TGTGTGTGTGTGTGTGTGTGGC--AGTTAGTGTGCG------------------------------------------------------ACACACTTAATTT-------------------TGCTGGCCATAAGTGTGC-----------------------------------TACA--CATT-------GCTGCA-AGAATTGTGT--ATT-----ACTTACCTA-AACAATA-CT-------------------------------------------------CATGCAATAAAGCACAAATATTTACA-CACACTCGCAC
droAna3 scaffold_13340:11593787-11594061 + GTGCGATCAGCACAGCGACTGTCGGGACGGAAGCGACGAGGCCCAGTGCAGTAAGCCCCTA-----------------------------------------TC----TGC-----------T-----TTGTTTG-------TT-GGT------------------------GTTGGC--------TAT--------------------CTTCT--------GT-----TGCATAT----------A-CC---CCGCTTTTACCCTC------TA-CTTGGTGTCGGT-TG-CTA--TATCT--------------A-------TAACACGCTATCCTATACTTTATGTCC------------------------------------------------C-------------------AGCTGCACTTGAGAGTGCCA------------------A-------------GCACA--CATT-------TCCCAG-GAAATTGTGT--AAT-----GCCCTGCTTAAAGA--T-TG-------------------------------------------------TACGTTATAAAGCACAAATATTTGCT-AACACACACAA
droBip1 scf7180000396691:501294-501572 + GTGCGATCAGCACAGTGACTGCCGGGACGGAAGCGACGAGGCCCAGTGCAGTAAGCCATTA-T-C-------------------------------------------TGA-----------------TTGTTTG-------TT-GGT-----------------GTT------TGGC--------TA------------T-----------GT--------CT-----TGAATAT----------A-CC---CCGCTTTTACCCTG------TA-CTTGGTGTCGGT-TG-CAATATCTATAT----------CTA-------TATCACACTATCCTATGCTTTATAACA------------------------------------------------C-------------------AGCTGCACTTGAGAGTTCCA------------------A-------------GCACA--CATT-------TTCCAG-GAAATTGTGT--AAT-----GCCCTGCTTAAAGA--T-TG-------------------------------------------------TATGCTATAAGGCACAAATATTTGCGAAACTCACACAA
droKik1 scf7180000301923:358193-358467 - GTGCGATCAGAACAAAGATTGTCGCGACGGAAGCGATGAGGCCCAGTGCAGTAAGCCAAAA-C-C--AAAT----CAA------TGCTAGCTTTCTAT-----C----TGTTCTGTACTTATTCCTCTGCGC----------TT-GGT------------------------GTTGGC--------TGCTTT------AAC----------------------------------------------------CTGCT------------------------------------C--TATA--------------TATATACTGT----TACTATCCC-----------------------------------------------------A------CTTTACTTTCTCCTCTTCTTACCCAGCTCTTGAGTATAT-A---------------------------------CACACACATA-----TTTCTGTG-GAAATTGTGT--AAT-----GCCATGCTT-AAAC--T-CG-------------------------------------------------CATGCAATAAAGCACAAATATTTACA-CA--------A
droFic1 scf7180000454055:1454080-1454368 - GTGCGATCAGACCAAAGATTGCCGCGACGGAAGCGATGAGGCCCAGTGCAGTAAGCCATAA-C-C--GATT----ATT------TCCTAGCCT-CTTT--TAC--------------------------TGC----------TT-GGT------------------------GTTGGT--------TGCTTT------AATAACGGAATTTTAT--------TT-----GGATTTT----------T-CC---CCTTTTA-------------TG-CTTGGTGTTGGT-TG-CTT--TTTGTTC----------CCGTAGACTGTAGTGTATT----------------------------------------------------------T------TT-------------------CCCTGCACTTAAGTGTGCCA------------------T-------------GAACA--CATT-------TCCCTG-AAACTTGTGTGTGATGCTATGCTATGCTA-AAAC--T-CG-------------------------------------------------CATGCAATAAAGCACAAATATTTACG-CA---------
droEle1 scf7180000491261:1210512-1210798 + GTGCGATCAGAACAAAGATTGCCGCGATGGAAGCGATGAGGCCCAGTGCAGTAAGCCAAAA-T-C--GAAT----ATT------CCTTAGACTTTT-----CTC----TGT-----------T---TTTTGC----------TT-GGT------------------------GTTGGC--------TGCTTT------AATATACGCAATTATC--------TT-----AGATT-T----------T-CA---CTGCCTT-------------TG-CTTGGTGTTGGT-TG-CTA--TTTATTT----------CTAGATGCTGTACCGAACT----------------------------------------------------------A------TT--------------------CCTGCACTTGACTGTGCCA------------------T-------------GCACA--CATT-------TCTCGA-AGAATTGTGT--AAT-----GCCATGTTA-AAAC--T-CG-------------------------------------------------TATGCAATAAAGCACAAATATTTACG-CA--------T
droRho1 scf7180000780007:426611-426887 - GTGCGATCAACACAAAGATTGCCATGATGGAAGTGATGAGGCTCAGTGCAGTAAGCCATAA-C-C--GAAT----ATT------CCTAAGTCCTTTTC---TCT----TGT-----------T----TTTGC----------TT-GGT------------------------GTTGGC--------TGCTAT------AATAACCGTAATTTAT--------TT-----CGATT-T----------T-CC---CTGCTTT-------------TG-CTTGGTGTTGGT-TG-CAA--TTTATTT----------CTATATATTATATTGTAGA----------------------------------------------------------A------TT-------------------CCCTACACTTGACTTTACTA------------------T-------------GCACA--CATT-------TCTCTG-AGCATTGTG-----------------CTA-AAAC--T-CG-------------------------------------------------TATGCAATAAACCACAAATATTAACG-C----------
droBia1 scf7180000302136:2393291-2393553 - GTGTGACCAGAACAAGGATTGTCGCGACGGAAGCGATGAGGCCCAGTGCAGTAAGCCATAA-C-C--GAAT----ATT------TCCTAGCTTTC------------------------------------T----------TT-GGT------------------------GCTGGT--------TGCCAT------AATAACCGAATTTATC--------CT-----TGATTTT----------T-CT---CTGCCCT-------------TC-CTTGGTGTTGGTTTG-CTA--TTTATCC------------------------GTATT----------------------------------------------------------T------AT-------------------CCCTGCACTCGACTGTGCCA------------------A-------------GCACA--CATT-------TCCCCG-AGTCTAGTGT--AAT-----GCCATGCTT-AAGC--C-AG-------------------------------------------------TATGCAATAGAGCACAAATATTTGCG-AA--------A
droTak1 scf7180000415367:911027-911308 + GTGCGATCAGACCAAGGATTGTCGCGATGGCAGCGACGAGGCCCAGTGCAGTAAGCCATGA-C-CATGAAT----ATT------TCCC---------------------GC-----------T-----TTGCTTT-------TT-GGT-----------------GCTTGGTTCTGGT--------TGCAAT---AATAGCAACCGAATTTATC--------TT-----TGATTTT----------T-CC---TTGCTTT-------------TA-TTTGGTGTTGGC-TG-CTA--TTTATAC----------CCGAATGCTTTAGTGAACT----------------------------------------------------------A------CT-----------------CCCCCTGCACTTGAATGTGCCA------------------T-------------GCACACTCAGT-------TCTCTG-AGA-----------T-----GCTTTGCTA-AAAC--T-AT-------------------------------------------------TATGCAATAGAGCACAAATATTTACG------------
droEug1 scf7180000409682:1084122-1084422 + GTGCGATCAGAGCAAGGATTGTCGCGATGGAAGCGATGAGGCGATGTGCAGTAAGCCAAAAAC-C--GAAT--ATATT------TCTTAGCTTGCTTT--TGC------A----------------CTTTGC----------TTACGT------------------------GTTGGT--------TGCAAT------AATAACCGAATTTATC--------TT-----AGATTTT----------TTCA---CTGCTTT-------------TGTTTTGGTGTTGGTTTG-GTA--TTTTTTC----------CTATATGCTATAGTGTACT------------------------------------------------------ACACA------CC-------------------CCCTGCACTCGACTGTGTCA------------------T-------------GCACA--CATT-------TCCCGA-AGACTTGTGTGTAAT-----GCCATGCTG-AAAC--T-CG-------------------------------------------------TATGCAATAAAGCTCAAATATTTACG-CA--------C
dm3 chr3R:21535502-21535796 - GTGCGATCAGAACAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCATAA-C-C--GAAT----ATT------TCCTAGCTCTCTGT--TACC----TGC-----------TTTGCTTTGC----------TT-GGT------------------------GTTGGT--------TGCCGT------AATAATTGAAATTATC--------GT-----AGATTTT----------T-CC---CTGCTTT-------------CC-TTTGGTGTTGGT-TGCTTA--TTTATTT----------CTAGATACTGTAGTGCACT----------------------------------------------------------A------TT-------------------CCCCGTACTTGACTGTGCCA------------------T-------------GAACA--CATG-------TCCCTG-AGACTTGTGT--TGT-----GACATCGTG-AAGC--T-CG-------------------------------------------------TATGCAATAATGTACAAATATTTACG-CA---------
droSim2 3r:21050022-21050310 - dsi_10885 GTGCGATCAGAACAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCATAA-A-C--GAAT----ATT------TACTAGCTTTCTGT--TACC----TGC-----------T-----TTGC----------TT-GGT------------------------GTTGGT--------TGCCGC------AATAACTGAAATTATC--------GT-----AGATTTT----------T-TA---CTGCTTC-------------CC-TTTGGTGTTGGT-TG-CTA--TTTATTC----------TTAGATACTGTAGTGCACT----------------------------------------------------------A------TT-------------------CCCTGCACTTGACTGTGCCA------------------T-------------GAACA--CATG-------TCCCTG-CGACTTGTGT--TGT-----GCCATGGTG-AAGC--T-CG-------------------------------------------------TATGCAATAATGTACAAATATTTACG-CA---------
droSec2 scaffold_13:332768-333056 - GTGCGATCAGAACAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCATAA-C-C--GAAT----ATT------TACTAGCTTTCTGT--TACC----TGC-----------T-----TTGC----------TT-GGT------------------------GTTGGT--------GGCCGT------AATAACTGAAATTATC--------GT-----TGATTTT----------T-TA---CTGCTTC-------------CC-TTTGGTGTTGGT-TG-CTA--TTTATTC----------TTAGATACTGTAGTGCACT----------------------------------------------------------A------TT-------------------CCCTGCACTTGACTGTGCCC------------------T-------------GAACA--CATG-------TCCCTG-CGACTTGTGT--TGT-----GCCATGGTG-AAGC--T-CG-------------------------------------------------TATGCAATAATGTACAAATATTTACG-CA---------
droYak3 3R:24933652-24933960 + GTGCGATCAGAACAAGGATTGTCGCGATGGCAGCGATGAGGCGCAGTGCAGTAAGCCATAA-A-C--GAAT----ATT------TCCTAGCTACCGCT--TACCTATTTGC-----------T-----TTGC----------TT-GGT------------------------GTTGGTGT------TGCTTTTAGAGTAATAACCGAAATAATC--------GT-----AGATTTC----------T-TCTTTCTGCTTC-----TC------TT-TTTGGTGTTGGT-TG-ATA--TTTATAT----------CTAGATGCTATAGTGCACT----------------------------------------------------------A------TT-------------------CGCTGCACTTGACTGTGCCA------------------T-------------GAACACACATG-------TCCCTGAAGACTTGTGT--TGT-----GCCATGGTG-AAGC--T-CG-------------------------------------------------TATGCAATAATGTACAAATATTTACG-CA---------
droEre2 scaffold_4820:6502817-6503099 + GTGCGATCAGGCCAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCAAAA-C-C--AAAT----ATT------TCTTAGCTCTCCCT--AGCC----TGC-----------T-----TTGC----------TT-GGT------------------------GTTGGA--------TA--AT------AATAACTGAAATTATT--------GT-----AGAACTT----------T-CC---CTGCT-------------------TTGGTGTTGGT-TG-CTA--TTTATAT----------CTAGATACTACAATGCACT----------------------------------------------------------T------TT-------------------CCCTGCACTTGAATGTGCCA------------------T-------------GAGCA--CATG-------TCCCTG-AGACTTGTGT--TGT-----GTCCTGGCG-AAGC--T-CG-------------------------------------------------TATGCAATAATGCACAAATATTTACG-CA--------C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GTGCGATCAAAACAAGGACTGCGACGATGGCAGCGATGAGGCCCAGTGCAGTAAGCCTTCAAT-C----------ATA-------TCTAAGTTTCTGT--TTGC----TGC-----------AACTCTTTGT----------TTTGGT------------------------GTTGGTGAAATCTA----------------------TCTATC--------GT-----TCT---------------------------------------------------------------------------------------------------CT--------------ATCTGCCTTTCCTGCTACGT------TATA-----T--------------------------------------------------CTGT-T-------------------------------GACACA--CATT-TGTATTTCTCTG-AAAGTTGTGT--AATTCCACACTTACCTA-CTAC--T-CGTATATC-------------------------------------------CTACCAATAAAGCACAAATATTTACG-CA--------GSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................CTA----------------------TCTATC--------GT-----TCT---------------------------------------------------------------------------------------------------CT--------------ATCTGCC.............................................................................................................................................................................................................................................................................2311.0010001000000
..........AACAAGGACTGCGACGATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..............AGGACTGCGACGATGGCAGCGATGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100000
.............AAGGACTGCGACGATGGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......................GACGATGGCAGCGATGAGGCCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..........AACAAGGACTGCGACGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..........AACAAGGACTGCGACGATGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000001
.......................ACGATGGCAGCGATGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
--------------AGGACTGCGACGATCGCAGCGATGAGGCCCAGTGCAGTAAGCCTTCA--------AT----CAT------CTCTAGGTTTCTGT--TTGC----TGC-----------AACTCTTTGT----------TTTGGT------------------------GTTGGTGAAATCTA----------------------TCTATC--------GT---------------------------------------------------------------T-TG-CTA--TCTGC---------------------------------------------------CTTCCCTGCTACGT------TATATT--------AC-------------------------------------------------A------------------TGTATCCTCTGTTGACACA--CATGTTGTATTTCTCTG-AAAGTTGTGT--AATTCCACACTTACCTA-CTAC--TGCGTATATC-------------------------------------------CTACCAATAAAGCACAAATATTTACG-CA--------GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................GT--TTGC----TGC-----------AACTCTTTGT----------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501001000
....................................................................................................................................................................................................................................................................................................................................................................................................C-------------------------------------------------A------------------TGTATCCTCTGTTGACAC....................................................................................................................................................2020.501100000
droWil2
GTGTGATCAGAATAAAGATTGCAGTGATGGCAGCGATGAGGCCATGTGTAGTAAGCAAAAA-A-A--AAAA----ATTGAAATTCTTTAGAAATTCTTTAAATC----TGT-----------G-----TTGT----------AT-GGT------------------------GTTGGA--------TATACT------TATTATACTTTTATAT--------TT-----TGTATAT----------T-TA---TTGCTTATGTGTACCTACTTAT-GTTGGTGTGTGT------A--TGTTTAC----------CAA-------ACTTATGTTTTTATGTGCCTCATATCCTGGTTCCCTGCTAAGTAGACACAATACTACAT--------------------------------------------------ATAC-ATACATACATATGTATGTAT-------------GTATA--------------CCCTG-TAAACAGTGG--TCCCTTACAATAACGTT-CCTT--A-CATATTCCCCACCTAACTATATATAGAGTTTGAACTACCTAAAGCCCCCAAAAGGCAATAAAACACAAATATTTACG-CA--------CSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........ATAAAGATTGCAGTGATGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200020
................................................................................................................................................................................................................................................................CTTATGTGTACCTACTTAT-GTTG.......................................................................................................................................................................................................................................................................................................................................................2311.00100001
....................GCAGTGATGGCAGCGATGAGGCCAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
..........................................................................................................................................................................................................................................................................................GTGTGT------A--TGTTTAC----------CAA-------ACTT.......................................................................................................................................................................................................................................................................................................2111.00100010
........AGAATAAAGATTGCAGTGATGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.............AAAGATTGCAGTGATGGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.........GAATAAAGATTGCAGTGATGGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
............................................................................................................................................................................................................................................................................................................................................................................................CAT--------------------------------------------------ATAC-ATACATACATATGT...........................................................................................................................................................................21200.05100010
droVir3
GTGTGATCAGAACAAAGATTGCAGCGATGGCAGCGATGAGGCCACGTGCAGTAAGCCATAT-TTC--GCAA----ATT------TCTAATCTTAA-------GC----TGT-----------AACTGTTTGTAAGCTGTAACTAAAACTCTAGTTGTTGTAGTGTGCT------TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT------TGTG-----TGTGTACATACTTCAGCT-------------------TGCTGGAGATAAGTATGC-----------------------------------TACA--CTTT-------GCTACA-AGAATTGTGC--AAT-----ACTTACCTA-AACAATA-CA-------------------------------------------------CATGCAATAAAGCACAAATATTTACA-CA--------CSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................GCGATGAGGCCACGTGCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
..................TTGCAGCGATGGCAGCGATGAGGCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AGCT-------------------TGCTGGAGATAAGTATGC-----------------------------------TACA--CT...............................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
.......CAGAACAAAGATTGCAGCGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
....................................................................................................................................AAGCTGTAACTAAAACTCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-------GCTACA-AGAATTGTGC--...................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
................GATTGCAGCGATGGCAGCGATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................GTAACTAAAACTCTAGTTGTTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................TAAAACTCTAGTTGTTGTAGTGTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000001000000000000000000000000000000000000000000000000000000
..........AACAAAGATTGCAGCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
............................GGCAGCGATGAGGCCACGTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................TGTGCT------TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT------TGTG-----TGTGTACATACT.....................................................................................................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA--CTTT-------GCTACA-AGAATTGTGC--A..................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
..............................CAGCGATGAGGCCACGTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
........................CGATGGCAGCGATGAGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000010000000000000000000000000000000000000000000000000000
.....ATCAGAACAAAGATTGCAGCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000001000000000000000000000000000000000000000000000000000
....GATCAGAACAAAGATTGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
.....ATCAGAACAAAGATTGCAGCGATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GCT-------------------TGCTGGAGATAAGTATGC-----------------------------------TACA--C................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AGCT-------------------TGCTGGAGATAAGTAT............................................................................................................................................................................................2011.001000000000000000000000000000010000000000000000000000000000000000
.........GAACAAAGATTGCAGCGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
GTGCGATCAGAGCAAAGATTGCAGCGATGGCAGCGACGAGGCCACTTGTAGTAAGCCAGAC-T-T--AAAGAAATGTT------TCCAAACCTAA------CTG----TGC-----------T-TTGCTTGTACACTGTAACTAAAGC------------------------TTTAGC--------TGTAAT------AGT----------------------------GTGTGCTCTAGTGCTCTCTCT---CTG-----------------------AGTATGTGT-GC-GTG--TGTGTTT----------GTACATACTTCAT-----------------------------------------------------------------------CT-------------------TGTTGCCCATAAGTATGA-----------------------------------TACA--CATT-------GCTGCA-AGTATTGTGT--AAT-----ACTTACCTA-AACAATA-CA-------------------------------------------------CTTGCAATAGAGCACAAATATTTACA-CA--------CSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTTT----------GTA..................................................................................................................................................................................................................................................................................................................22160.006015145035
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTTT----------GT...................................................................................................................................................................................................................................................................................................................21615.50931801312050
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTTT----------G....................................................................................................................................................................................................................................................................................................................2097.5668250314026
...................................................................................................................................................................................................................................................TCTCTCT---CTG-----------------------AGTATGTGT-GC-GT.........................................................................................................................................................................................................................................................................................................................................2313.003101001
................................................................................................................................................................................................................................................TGCTCTCTCT---CTG-----------------------AGTATGTGT-GC-GT.........................................................................................................................................................................................................................................................................................................................................2612.002000002
..................................................................................................................................................................................................................................................CTCTCTCT---CTG-----------------------AGTATGTGT-GC-GT.........................................................................................................................................................................................................................................................................................................................................2412.002000002
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTTT----------.....................................................................................................................................................................................................................................................................................................................19171.71296037013
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTTT----------GTC..................................................................................................................................................................................................................................................................................................................22201.25258032012
..........................................................................................................................................................................................................................................................................................ATGTGT-GC-GTG--TGTGTTT----------GTA..................................................................................................................................................................................................................................................................................................................2111.001100000
.............AAAGATTGCAGCGATGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000100
...............................................................................................................................................................................................................................................GTGCTCTCTCT---CTG-----------------------AGTATGTGT-GC-GT.........................................................................................................................................................................................................................................................................................................................................2711.001000001
..................TTGCAGCGATGGCAGCGACGAGGCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTTT----------GTAC.................................................................................................................................................................................................................................................................................................................2311.001100000
..........................................................................................................................................................................................TGTAAT------AGT----------------------------GTGTGCTCT.................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
........AGAGCAAAGATTGCAGCGATGGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...................................................................................................................................................................................................................................................TCTCTCT---CTG-----------------------AGTATGTGT-GC-GTG--T.....................................................................................................................................................................................................................................................................................................................................2511.001100000
.....................................................................................................................................................................................................................................................................................................TG--TGTGTTT----------GTACATACTTCAT-----------------------------------------------------------------------C................................................................................................................................................................................................................................2311.001100000
......................................................................................................................................................................................................................................................CTCT---CTG-----------------------AGTATGTGT-GC-GTG--TGT...................................................................................................................................................................................................................................................................................................................................2411.001000001
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTTT----------C....................................................................................................................................................................................................................................................................................................................20200.204001003
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTT................................................................................................................................................................................................................................................................................................................................18200.204200200
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTTT----------GTT..................................................................................................................................................................................................................................................................................................................22200.153000003
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTTT----------GTAA.................................................................................................................................................................................................................................................................................................................2390.111000001
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTTT----------GTAT.................................................................................................................................................................................................................................................................................................................23200.102000002
..........................................................................................................................................................................................................................................................................................ATGTGT-GC-GTG--TGTGTTT----------GT...................................................................................................................................................................................................................................................................................................................20100.101100000
..........................................................................................................................................................................................................................................................................................ATGTGT-GC-GTG--TGTGTTT----------G....................................................................................................................................................................................................................................................................................................................19130.081100000
droGri2
GTGTGATCAGAGCAAAGATTGCAGCGATGGCTCCGATGAGGCCACGTGCAGTAAGCCATCA-A-A--TTTT----AAT------CTCTA------TTT--TAAC----TG----------------------------TAACTAAAGC------------------------CCTGTC--------GGCAGT------AGTAT-CGTAATTCTCTTATGTATTTAGTTTA-------------------G---CTGCTCT--------------C-TG-TGTATTTGT-GT-GTG--TGTGTGTGTGTGTGTGTGTGGC--AGTTAGTGTGCG------------------------------------------------------ACACACTTAATTT-------------------TGCTGGCCATAAGTGTGC-----------------------------------TACA--CATT-------GCTGCA-AGAATTGTGT--ATT-----ACTTACCTA-AACAATA-CT-------------------------------------------------CATGCAATAAAGCACAAATATTTACA-CACACTCGCACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................AGCGATGGCTCCGATGAGGCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
droAna3
GTGCGATCAGCACAGCGACTGTCGGGACGGAAGCGACGAGGCCCAGTGCAGTAAGCCCCTA-----------------------------------------TC----TGC-----------T-----TTGTTTG-------TT-GGT------------------------GTTGGC--------TAT--------------------CTTCT--------GT-----TGCATAT----------A-CC---CCGCTTTTACCCTC------TA-CTTGGTGTCGGT-TG-CTA--TATCT--------------A-------TAACACGCTATCCTATACTTTATGTCC------------------------------------------------C-------------------AGCTGCACTTGAGAGTGCCA------------------A-------------GCACA--CATT-------TCCCAG-GAAATTGTGT--AAT-----GCCCTGCTTAAAGA--T-TG-------------------------------------------------TACGTTATAAAGCACAAATATTTGCT-AACACACACAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........ACAGCGACTGTCGGGACGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
....................GTCGGGACGGAAGCGACGAGGCCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
GTGCGATCAGCACAGCGACTGTCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
................GACTGTCGGGACGGAAGCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
............................GGAAGCGACGAGGCCCAGTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
..............GCGACTGTCGGGACGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
droBip1
GTGCGATCAGCACAGTGACTGCCGGGACGGAAGCGACGAGGCCCAGTGCAGTAAGCCATTA-T-C-------------------------------------------TGA-----------------TTGTTTG-------TT-GGT-----------------GTT------TGGC--------TA------------T-----------GT--------CT-----TGAATAT----------A-CC---CCGCTTTTACCCTG------TA-CTTGGTGTCGGT-TG-CAATATCTATAT----------CTA-------TATCACACTATCCTATGCTTTATAACA------------------------------------------------C-------------------AGCTGCACTTGAGAGTTCCA------------------A-------------GCACA--CATT-------TTCCAG-GAAATTGTGT--AAT-----GCCCTGCTTAAAGA--T-TG-------------------------------------------------TATGCTATAAGGCACAAATATTTGCGAAACTCACACAASizeHit CountTotal NormTotal
No Reads
droKik1
GTGCGATCAGAACAAAGATTGTCGCGACGGAAGCGATGAGGCCCAGTGCAGTAAGCCAAAA-C-C--AAAT----CAA------TGCTAGCTTTCTAT-----C----TGTTCTGTACTTATTCCTCTGCGC----------TT-GGT------------------------GTTGGC--------TGCTTT------AAC----------------------------------------------------CTGCT------------------------------------C--TATA--------------TATATACTGT----TACTATCCC-----------------------------------------------------A------CTTTACTTTCTCCTCTTCTTACCCAGCTCTTGAGTATAT-A---------------------------------CACACACATA-----TTTCTGTG-GAAATTGTGT--AAT-----GCCATGCTT-AAAC--T-CG-------------------------------------------------CATGCAATAAAGCACAAATATTTACA-CA--------ASizeHit CountTotal NormTotal
No Reads
droFic1
GTGCGATCAGACCAAAGATTGCCGCGACGGAAGCGATGAGGCCCAGTGCAGTAAGCCATAA-C-C--GATT----ATT------TCCTAGCCT-CTTT--TAC--------------------------TGC----------TT-GGT------------------------GTTGGT--------TGCTTT------AATAACGGAATTTTAT--------TT-----GGATTTT----------T-CC---CCTTTTA-------------TG-CTTGGTGTTGGT-TG-CTT--TTTGTTC----------CCGTAGACTGTAGTGTATT----------------------------------------------------------T------TT-------------------CCCTGCACTTAAGTGTGCCA------------------T-------------GAACA--CATT-------TCCCTG-AAACTTGTGTGTGATGCTATGCTATGCTA-AAAC--T-CG-------------------------------------------------CATGCAATAAAGCACAAATATTTACG-CA---------SizeHit CountTotal NormTotal
No Reads
droEle1
GTGCGATCAGAACAAAGATTGCCGCGATGGAAGCGATGAGGCCCAGTGCAGTAAGCCAAAA-T-C--GAAT----ATT------CCTTAGACTTTT-----CTC----TGT-----------T---TTTTGC----------TT-GGT------------------------GTTGGC--------TGCTTT------AATATACGCAATTATC--------TT-----AGATT-T----------T-CA---CTGCCTT-------------TG-CTTGGTGTTGGT-TG-CTA--TTTATTT----------CTAGATGCTGTACCGAACT----------------------------------------------------------A------TT--------------------CCTGCACTTGACTGTGCCA------------------T-------------GCACA--CATT-------TCTCGA-AGAATTGTGT--AAT-----GCCATGTTA-AAAC--T-CG-------------------------------------------------TATGCAATAAAGCACAAATATTTACG-CA--------TSizeHit CountTotal NormTotal
No Reads
droRho1
GTGCGATCAACACAAAGATTGCCATGATGGAAGTGATGAGGCTCAGTGCAGTAAGCCATAA-C-C--GAAT----ATT------CCTAAGTCCTTTTC---TCT----TGT-----------T----TTTGC----------TT-GGT------------------------GTTGGC--------TGCTAT------AATAACCGTAATTTAT--------TT-----CGATT-T----------T-CC---CTGCTTT-------------TG-CTTGGTGTTGGT-TG-CAA--TTTATTT----------CTATATATTATATTGTAGA----------------------------------------------------------A------TT-------------------CCCTACACTTGACTTTACTA------------------T-------------GCACA--CATT-------TCTCTG-AGCATTGTG-----------------CTA-AAAC--T-CG-------------------------------------------------TATGCAATAAACCACAAATATTAACG-C----------SizeHit CountTotal NormTotal
No Reads
droBia1
GTGTGACCAGAACAAGGATTGTCGCGACGGAAGCGATGAGGCCCAGTGCAGTAAGCCATAA-C-C--GAAT----ATT------TCCTAGCTTTC------------------------------------T----------TT-GGT------------------------GCTGGT--------TGCCAT------AATAACCGAATTTATC--------CT-----TGATTTT----------T-CT---CTGCCCT-------------TC-CTTGGTGTTGGTTTG-CTA--TTTATCC------------------------GTATT----------------------------------------------------------T------AT-------------------CCCTGCACTCGACTGTGCCA------------------A-------------GCACA--CATT-------TCCCCG-AGTCTAGTGT--AAT-----GCCATGCTT-AAGC--C-AG-------------------------------------------------TATGCAATAGAGCACAAATATTTGCG-AA--------ASizeHit CountTotal NormTotal
No Reads
droTak1
GTGCGATCAGACCAAGGATTGTCGCGATGGCAGCGACGAGGCCCAGTGCAGTAAGCCATGA-C-CATGAAT----ATT------TCCC---------------------GC-----------T-----TTGCTTT-------TT-GGT-----------------GCTTGGTTCTGGT--------TGCAAT---AATAGCAACCGAATTTATC--------TT-----TGATTTT----------T-CC---TTGCTTT-------------TA-TTTGGTGTTGGC-TG-CTA--TTTATAC----------CCGAATGCTTTAGTGAACT----------------------------------------------------------A------CT-----------------CCCCCTGCACTTGAATGTGCCA------------------T-------------GCACACTCAGT-------TCTCTG-AGA-----------T-----GCTTTGCTA-AAAC--T-AT-------------------------------------------------TATGCAATAGAGCACAAATATTTACG------------SizeHit CountTotal NormTotal
No Reads
droEug1
GTGCGATCAGAGCAAGGATTGTCGCGATGGAAGCGATGAGGCGATGTGCAGTAAGCCAAAAAC-C--GAAT--ATATT------TCTTAGCTTGCTTT--TGC------A----------------CTTTGC----------TTACGT------------------------GTTGGT--------TGCAAT------AATAACCGAATTTATC--------TT-----AGATTTT----------TTCA---CTGCTTT-------------TGTTTTGGTGTTGGTTTG-GTA--TTTTTTC----------CTATATGCTATAGTGTACT------------------------------------------------------ACACA------CC-------------------CCCTGCACTCGACTGTGTCA------------------T-------------GCACA--CATT-------TCCCGA-AGACTTGTGTGTAAT-----GCCATGCTG-AAAC--T-CG-------------------------------------------------TATGCAATAAAGCTCAAATATTTACG-CA--------CSizeHit CountTotal NormTotal
No Reads
dm3
GTGCGATCAGAACAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCATAA-C-C--GAAT----ATT------TCCTAGCTCTCTGT--TACC----TGC-----------TTTGCTTTGC----------TT-GGT------------------------GTTGGT--------TGCCGT------AATAATTGAAATTATC--------GT-----AGATTTT----------T-CC---CTGCTTT-------------CC-TTTGGTGTTGGT-TGCTTA--TTTATTT----------CTAGATACTGTAGTGCACT----------------------------------------------------------A------TT-------------------CCCCGTACTTGACTGTGCCA------------------T-------------GAACA--CATG-------TCCCTG-AGACTTGTGT--TGT-----GACATCGTG-AAGC--T-CG-------------------------------------------------TATGCAATAATGTACAAATATTTACG-CA---------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................GATGGAAGCGATGAGGCGCAGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23111.001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCA------------------T-------------GAACA--CATG-------TCCCTG-AGAC...........................................................................................................................27111.001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011
....................................................................................................TACC----TGC-----------TTTGCTTTGC----------TT-GGT------------------------GTTGGT--------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009
......TCAGAACAAAGATTGTCGCGATGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........AGAACAAAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010201000000
........................CGATGGAAGCGATGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000101000000
............CAAAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................TTGTCGCGATGGAAGCGATGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
..........................................................TAA-C-C--GAAT----ATT------TCCTAGCTCTCTGT--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AAAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GATGGAAGCGATGAGGCGCAGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................GATGGAAGCGATGAGGCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................GCGATGGAAGCGATGAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000
......TCAGAACAAAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................CGATGGAAGCGATGAGGCGCAGTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000001000000
.....ATCAGAACAAAGATTGTCGCGATGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TCAGAACAAAGATTGTCGCGATGGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TCAGAACAAAGATTGTCGCGATGGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000
...................TGTCGCGATGGAAGCGATGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TT----------T-CC---CTGCTTT-------------CC-TTTGGTGTTGGT-..............................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATTGTCGCGATGGAAGCGATGAGGCGCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002
......................CGCGATGGAAGCGATGAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................T-CC---CTGCTTT-------------CC-TTTGGTGTTGGT-..............................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CGCGATGGAAGCGATGAGGCGCAGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............AAAGATTGTCGCGATGGAAGCGATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............AAAGATTGTCGCGATGGAAGCGATGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAGATTGTCGCGATGGAAGCGATGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTCGCGATGGAAGCGATGAGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTCGCGATGGAAGCGATGAGGCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...CGATCAGAACAAAGATTGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................AAGCGATGAGGCGCAGTGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAAAGATTGTCGCGATGGAAGCGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
................................GCGATGAGGCGCAGTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TTATTT----------CTAGATACTGTAGTGCACT----------------------------------------------------------........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AACAAAGATTGTCGCGATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAAAGATTGTCGCGATGGAAGCGATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCA------------------T-------------GAACA--CATG-------TCCCTG-AGA............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
...........ACAAAGATTGTCGCGATGGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GATTGTCGCGATGGAAGCGATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................T-------------CC-TTTGGTGTTGGT-TGC...........................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AGAACAAAGATTGTCGCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AAAGATTGTCGCGATGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..........................ATGGAAGCGATGAGGCGCAGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........ACAAAGATTGTCGCGATGGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................GCGATGGAAGCGATGAGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...........ACAAAGATTGTCGCGATGGAAGCGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CGCGATGGAAGCGATGAGGCGCAGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGT--TGT-----GACATCGTG-AAGC--T-CG-------------------------------------------------......................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATCGTG-AAGC--T-CG-------------------------------------------------TATGCAATAA............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................GTTGGT-TGCTTA--TTTATTT----------CTAGATAC.............................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCGCGATGGAAGCGATGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................GCGATGGAAGCGATGAGGCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTCGCGATGGAAGCGATGAGGCGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CAGAACAAAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................GCGATGGAAGCGATGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTCGCGATGGAAGCGATGAGGCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CGCGATGGAAGCGATGAGGCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................CGCGATGGAAGCGATGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................GATTGTCGCGATGGAAGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...............................AGCGATGAGGCGCAGTGCAGTAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................TGTCGCGATGGAAGCGATGAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAAAGATTGTCGCGATGGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................ATTGTCGCGATGGAAGCGATGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................TGAGGCGCAGTGCAGTAAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
................GATTGTCGCGATGGAAGCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CGCGATGGAAGCGATGAGGCGCAGTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTG-AGACTTGTGT--TGT-----GACATCGT...................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AA-C-C--GAAT----ATT------TCCTAGCTCTCTGT--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TCAGAACAAAGATTGTCGCGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................C--GAAT----ATT------TCCTAGCTCTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAAAGATTGTCGCGATGGAAGCGATGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............AAAGATTGTCGCGATGGAAGCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AGCGATGAGGCGCAGTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GATGGAAGCGATGAGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GCGATGGAAGCGATGAGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
droSim2
GTGCGATCAGAACAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCATAA-A-C--GAAT----ATT------TACTAGCTTTCTGT--TACC----TGC-----------T-----TTGC----------TT-GGT------------------------GTTGGT--------TGCCGC------AATAACTGAAATTATC--------GT-----AGATTTT----------T-TA---CTGCTTC-------------CC-TTTGGTGTTGGT-TG-CTA--TTTATTC----------TTAGATACTGTAGTGCACT----------------------------------------------------------A------TT-------------------CCCTGCACTTGACTGTGCCA------------------T-------------GAACA--CATG-------TCCCTG-CGACTTGTGT--TGT-----GCCATGGTG-AAGC--T-CG-------------------------------------------------TATGCAATAATGTACAAATATTTACG-CA---------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......TCAGAACAAAGATTGTCGCGATGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.00400000020020000000
.....................................................................................................................................................................................................................................................................................................TA--TTTATTC----------TTAGATACTGTAGTGCACT----------------------------------------------------------A------.................................................................................................................................................................................................................................2913.00300000012000000000
.......CAGAACAAAGATTGTCGCGATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
......TCAGAACAAAGATTGTCGCGATGGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.............AAAGATTGTCGCGATGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
......TCAGAACAAAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
......TCAGAACAAAGATTGTCGCGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000010000000
.......CAGAACAAAGATTGTCGCGATGGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCACTTGACTGTGCCT------------------......................................................................................................................................................................1811.00101000000000000000
............CAAAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
..................................GATGAGGCGCAGTGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1640.25100000000001000000
droSec2
GTGCGATCAGAACAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCATAA-C-C--GAAT----ATT------TACTAGCTTTCTGT--TACC----TGC-----------T-----TTGC----------TT-GGT------------------------GTTGGT--------GGCCGT------AATAACTGAAATTATC--------GT-----TGATTTT----------T-TA---CTGCTTC-------------CC-TTTGGTGTTGGT-TG-CTA--TTTATTC----------TTAGATACTGTAGTGCACT----------------------------------------------------------A------TT-------------------CCCTGCACTTGACTGTGCCC------------------T-------------GAACA--CATG-------TCCCTG-CGACTTGTGT--TGT-----GCCATGGTG-AAGC--T-CG-------------------------------------------------TATGCAATAATGTACAAATATTTACG-CA---------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........ACAAAGATTGTCGCGATGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.......................GCGATGGAAGCGATGAGGCGCAGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
.........................GATGGAAGCGATGAGGCGCAGTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
droYak3
GTGCGATCAGAACAAGGATTGTCGCGATGGCAGCGATGAGGCGCAGTGCAGTAAGCCATAA-A-C--GAAT----ATT------TCCTAGCTACCGCT--TACCTATTTGC-----------T-----TTGC----------TT-GGT------------------------GTTGGTGT------TGCTTTTAGAGTAATAACCGAAATAATC--------GT-----AGATTTC----------T-TCTTTCTGCTTC-----TC------TT-TTTGGTGTTGGT-TG-ATA--TTTATAT----------CTAGATGCTATAGTGCACT----------------------------------------------------------A------TT-------------------CGCTGCACTTGACTGTGCCA------------------T-------------GAACACACATG-------TCCCTGAAGACTTGTGT--TGT-----GCCATGGTG-AAGC--T-CG-------------------------------------------------TATGCAATAATGTACAAATATTTACG-CA---------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................GATGGCAGCGATGAGGCGCAGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
....................................................................................................................................................................................................................................................................................................ATA--TTTATAT----------CTAGATGCTATAGT.......................................................................................................................................................................................................................................................................................................2411.00100000010000
..................................GATGAGGCGCAGTGCAGTAAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...........ACAAGGATTGTCGCGATGGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
......................CGCGATGGCAGCGATGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...............GGATTGTCGCGATGGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
droEre2
GTGCGATCAGGCCAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCAAAA-C-C--AAAT----ATT------TCTTAGCTCTCCCT--AGCC----TGC-----------T-----TTGC----------TT-GGT------------------------GTTGGA--------TA--AT------AATAACTGAAATTATT--------GT-----AGAACTT----------T-CC---CTGCT-------------------TTGGTGTTGGT-TG-CTA--TTTATAT----------CTAGATACTACAATGCACT----------------------------------------------------------T------TT-------------------CCCTGCACTTGAATGTGCCA------------------T-------------GAGCA--CATG-------TCCCTG-AGACTTGTGT--TGT-----GTCCTGGCG-AAGC--T-CG-------------------------------------------------TATGCAATAATGCACAAATATTTACG-CA--------CSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............AGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000020
......................CGCGATGGAAGCGATGAGGCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000110
.............AAAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.......CAGGCCAAAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
............CAAAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
................GATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000

Generated: 05/17/2015 at 11:11 PM

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:23559486-23559736 + dps_748 GTGCGATCAAAACAAGGACTGCGACGATGGCAGCGATGAGGCCCAGTGCAGTAAGCCTTCAAT-C----------ATA-------TCTAAGTTTCTGT--TTGC----TGC-----------AACTCTTTGT----------TTTGGT------------------------GTTGGTGAAATCTA----------------------TCTATC--------GT-----TCT---------------------------------------------------------------------------------------------------CT--------------ATCTGCCTTTCCTGCTACGT------TATA-----T--------------------------------------------------CTGT-T-------------------------------GACACA--CATT-TGTATTTCTCTG-AAAGTTGTGT--AATTCCACACTTACCTA-CTAC--T-CGTATATC-------------------------------------------CTACCAATAAAGCACAAATATTTACG-CA--------G
droPer2 scaffold_11378:1-251 + --------------AGGACTGCGACGATCGCAGCGATGAGGCCCAGTGCAGTAAGCCTTCA--------AT----CAT------CTCTAGGTTTCTGT--TTGC----TGC-----------AACTCTTTGT----------TTTGGT------------------------GTTGGTGAAATCTA----------------------TCTATC--------GT---------------------------------------------------------------T-TG-CTA--TCTGC---------------------------------------------------CTTCCCTGCTACGT------TATATT--------AC-------------------------------------------------A------------------TGTATCCTCTGTTGACACA--CATGTTGTATTTCTCTG-AAAGTTGTGT--AATTCCACACTTACCTA-CTAC--TGCGTATATC-------------------------------------------CTACCAATAAAGCACAAATATTTACG-CA--------G
droWil2 scf2_1100000004943:14507152-14507550 + GTGTGATCAGAATAAAGATTGCAGTGATGGCAGCGATGAGGCCATGTGTAGTAAGCAAAAA-A-A--AAAA----ATTGAAATTCTTTAGAAATTCTTTAAATC----TGT-----------G-----TTGT----------AT-GGT------------------------GTTGGA--------TATACT------TATTATACTTTTATAT--------TT-----TGTATAT----------T-TA---TTGCTTATGTGTACCTACTTAT-GTTGGTGTGTGT------A--TGTTTAC----------CAA-------ACTTATGTTTTTATGTGCCTCATATCCTGGTTCCCTGCTAAGTAGACACAATACTACAT--------------------------------------------------ATAC-ATACATACATATGTATGTAT-------------GTATA--------------CCCTG-TAAACAGTGG--TCCCTTACAATAACGTT-CCTT--A-CATATTCCCCACCTAACTATATATAGAGTTTGAACTACCTAAAGCCCCCAAAAGGCAATAAAACACAAATATTTACG-CA--------C
droVir3 scaffold_12855:6961400-6961650 - dvi_4251 GTGTGATCAGAACAAAGATTGCAGCGATGGCAGCGATGAGGCCACGTGCAGTAAGCCATAT-TTC--GCAA----ATT------TCTAATCTTAA-------GC----TGT-----------AACTGTTTGTAAGCTGTAACTAAAACTCTAGTTGTTGTAGTGTGCT------TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT------TGTG-----TGTGTACATACTTCAGCT-------------------TGCTGGAGATAAGTATGC-----------------------------------TACA--CTTT-------GCTACA-AGAATTGTGC--AAT-----ACTTACCTA-AACAATA-CA-------------------------------------------------CATGCAATAAAGCACAAATATTTACA-CA--------C
droMoj3 scaffold_6540:25653582-25653864 + dmo_2060 GTGCGATCAGAGCAAAGATTGCAGCGATGGCAGCGACGAGGCCACTTGTAGTAAGCCAGAC-T-T--AAAGAAATGTT------TCCAAACCTAA------CTG----TGC-----------T-TTGCTTGTACACTGTAACTAAAGC------------------------TTTAGC--------TGTAAT------AGT----------------------------GTGTGCTCTAGTGCTCTCTCT---CTG-----------------------AGTATGTGT-GC-GTG--TGTGTTT----------GTACATACTTCAT-----------------------------------------------------------------------CT-------------------TGTTGCCCATAAGTATGA-----------------------------------TACA--CATT-------GCTGCA-AGTATTGTGT--AAT-----ACTTACCTA-AACAATA-CA-------------------------------------------------CTTGCAATAGAGCACAAATATTTACA-CA--------C
droGri2 scaffold_15074:5840821-5841129 + GTGTGATCAGAGCAAAGATTGCAGCGATGGCTCCGATGAGGCCACGTGCAGTAAGCCATCA-A-A--TTTT----AAT------CTCTA------TTT--TAAC----TG----------------------------TAACTAAAGC------------------------CCTGTC--------GGCAGT------AGTAT-CGTAATTCTCTTATGTATTTAGTTTA-------------------G---CTGCTCT--------------C-TG-TGTATTTGT-GT-GTG--TGTGTGTGTGTGTGTGTGTGGC--AGTTAGTGTGCG------------------------------------------------------ACACACTTAATTT-------------------TGCTGGCCATAAGTGTGC-----------------------------------TACA--CATT-------GCTGCA-AGAATTGTGT--ATT-----ACTTACCTA-AACAATA-CT-------------------------------------------------CATGCAATAAAGCACAAATATTTACA-CACACTCGCAC
droAna3 scaffold_13340:11593787-11594061 + GTGCGATCAGCACAGCGACTGTCGGGACGGAAGCGACGAGGCCCAGTGCAGTAAGCCCCTA-----------------------------------------TC----TGC-----------T-----TTGTTTG-------TT-GGT------------------------GTTGGC--------TAT--------------------CTTCT--------GT-----TGCATAT----------A-CC---CCGCTTTTACCCTC------TA-CTTGGTGTCGGT-TG-CTA--TATCT--------------A-------TAACACGCTATCCTATACTTTATGTCC------------------------------------------------C-------------------AGCTGCACTTGAGAGTGCCA------------------A-------------GCACA--CATT-------TCCCAG-GAAATTGTGT--AAT-----GCCCTGCTTAAAGA--T-TG-------------------------------------------------TACGTTATAAAGCACAAATATTTGCT-AACACACACAA
droBip1 scf7180000396691:501294-501572 + GTGCGATCAGCACAGTGACTGCCGGGACGGAAGCGACGAGGCCCAGTGCAGTAAGCCATTA-T-C-------------------------------------------TGA-----------------TTGTTTG-------TT-GGT-----------------GTT------TGGC--------TA------------T-----------GT--------CT-----TGAATAT----------A-CC---CCGCTTTTACCCTG------TA-CTTGGTGTCGGT-TG-CAATATCTATAT----------CTA-------TATCACACTATCCTATGCTTTATAACA------------------------------------------------C-------------------AGCTGCACTTGAGAGTTCCA------------------A-------------GCACA--CATT-------TTCCAG-GAAATTGTGT--AAT-----GCCCTGCTTAAAGA--T-TG-------------------------------------------------TATGCTATAAGGCACAAATATTTGCGAAACTCACACAA
droKik1 scf7180000301923:358193-358467 - GTGCGATCAGAACAAAGATTGTCGCGACGGAAGCGATGAGGCCCAGTGCAGTAAGCCAAAA-C-C--AAAT----CAA------TGCTAGCTTTCTAT-----C----TGTTCTGTACTTATTCCTCTGCGC----------TT-GGT------------------------GTTGGC--------TGCTTT------AAC----------------------------------------------------CTGCT------------------------------------C--TATA--------------TATATACTGT----TACTATCCC-----------------------------------------------------A------CTTTACTTTCTCCTCTTCTTACCCAGCTCTTGAGTATAT-A---------------------------------CACACACATA-----TTTCTGTG-GAAATTGTGT--AAT-----GCCATGCTT-AAAC--T-CG-------------------------------------------------CATGCAATAAAGCACAAATATTTACA-CA--------A
droFic1 scf7180000454055:1454080-1454368 - GTGCGATCAGACCAAAGATTGCCGCGACGGAAGCGATGAGGCCCAGTGCAGTAAGCCATAA-C-C--GATT----ATT------TCCTAGCCT-CTTT--TAC--------------------------TGC----------TT-GGT------------------------GTTGGT--------TGCTTT------AATAACGGAATTTTAT--------TT-----GGATTTT----------T-CC---CCTTTTA-------------TG-CTTGGTGTTGGT-TG-CTT--TTTGTTC----------CCGTAGACTGTAGTGTATT----------------------------------------------------------T------TT-------------------CCCTGCACTTAAGTGTGCCA------------------T-------------GAACA--CATT-------TCCCTG-AAACTTGTGTGTGATGCTATGCTATGCTA-AAAC--T-CG-------------------------------------------------CATGCAATAAAGCACAAATATTTACG-CA---------
droEle1 scf7180000491261:1210512-1210798 + GTGCGATCAGAACAAAGATTGCCGCGATGGAAGCGATGAGGCCCAGTGCAGTAAGCCAAAA-T-C--GAAT----ATT------CCTTAGACTTTT-----CTC----TGT-----------T---TTTTGC----------TT-GGT------------------------GTTGGC--------TGCTTT------AATATACGCAATTATC--------TT-----AGATT-T----------T-CA---CTGCCTT-------------TG-CTTGGTGTTGGT-TG-CTA--TTTATTT----------CTAGATGCTGTACCGAACT----------------------------------------------------------A------TT--------------------CCTGCACTTGACTGTGCCA------------------T-------------GCACA--CATT-------TCTCGA-AGAATTGTGT--AAT-----GCCATGTTA-AAAC--T-CG-------------------------------------------------TATGCAATAAAGCACAAATATTTACG-CA--------T
droRho1 scf7180000780007:426611-426887 - GTGCGATCAACACAAAGATTGCCATGATGGAAGTGATGAGGCTCAGTGCAGTAAGCCATAA-C-C--GAAT----ATT------CCTAAGTCCTTTTC---TCT----TGT-----------T----TTTGC----------TT-GGT------------------------GTTGGC--------TGCTAT------AATAACCGTAATTTAT--------TT-----CGATT-T----------T-CC---CTGCTTT-------------TG-CTTGGTGTTGGT-TG-CAA--TTTATTT----------CTATATATTATATTGTAGA----------------------------------------------------------A------TT-------------------CCCTACACTTGACTTTACTA------------------T-------------GCACA--CATT-------TCTCTG-AGCATTGTG-----------------CTA-AAAC--T-CG-------------------------------------------------TATGCAATAAACCACAAATATTAACG-C----------
droBia1 scf7180000302136:2393291-2393553 - GTGTGACCAGAACAAGGATTGTCGCGACGGAAGCGATGAGGCCCAGTGCAGTAAGCCATAA-C-C--GAAT----ATT------TCCTAGCTTTC------------------------------------T----------TT-GGT------------------------GCTGGT--------TGCCAT------AATAACCGAATTTATC--------CT-----TGATTTT----------T-CT---CTGCCCT-------------TC-CTTGGTGTTGGTTTG-CTA--TTTATCC------------------------GTATT----------------------------------------------------------T------AT-------------------CCCTGCACTCGACTGTGCCA------------------A-------------GCACA--CATT-------TCCCCG-AGTCTAGTGT--AAT-----GCCATGCTT-AAGC--C-AG-------------------------------------------------TATGCAATAGAGCACAAATATTTGCG-AA--------A
droTak1 scf7180000415367:911027-911308 + GTGCGATCAGACCAAGGATTGTCGCGATGGCAGCGACGAGGCCCAGTGCAGTAAGCCATGA-C-CATGAAT----ATT------TCCC---------------------GC-----------T-----TTGCTTT-------TT-GGT-----------------GCTTGGTTCTGGT--------TGCAAT---AATAGCAACCGAATTTATC--------TT-----TGATTTT----------T-CC---TTGCTTT-------------TA-TTTGGTGTTGGC-TG-CTA--TTTATAC----------CCGAATGCTTTAGTGAACT----------------------------------------------------------A------CT-----------------CCCCCTGCACTTGAATGTGCCA------------------T-------------GCACACTCAGT-------TCTCTG-AGA-----------T-----GCTTTGCTA-AAAC--T-AT-------------------------------------------------TATGCAATAGAGCACAAATATTTACG------------
droEug1 scf7180000409682:1084122-1084422 + GTGCGATCAGAGCAAGGATTGTCGCGATGGAAGCGATGAGGCGATGTGCAGTAAGCCAAAAAC-C--GAAT--ATATT------TCTTAGCTTGCTTT--TGC------A----------------CTTTGC----------TTACGT------------------------GTTGGT--------TGCAAT------AATAACCGAATTTATC--------TT-----AGATTTT----------TTCA---CTGCTTT-------------TGTTTTGGTGTTGGTTTG-GTA--TTTTTTC----------CTATATGCTATAGTGTACT------------------------------------------------------ACACA------CC-------------------CCCTGCACTCGACTGTGTCA------------------T-------------GCACA--CATT-------TCCCGA-AGACTTGTGTGTAAT-----GCCATGCTG-AAAC--T-CG-------------------------------------------------TATGCAATAAAGCTCAAATATTTACG-CA--------C
dm3 chr3R:21535502-21535796 - GTGCGATCAGAACAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCATAA-C-C--GAAT----ATT------TCCTAGCTCTCTGT--TACC----TGC-----------TTTGCTTTGC----------TT-GGT------------------------GTTGGT--------TGCCGT------AATAATTGAAATTATC--------GT-----AGATTTT----------T-CC---CTGCTTT-------------CC-TTTGGTGTTGGT-TGCTTA--TTTATTT----------CTAGATACTGTAGTGCACT----------------------------------------------------------A------TT-------------------CCCCGTACTTGACTGTGCCA------------------T-------------GAACA--CATG-------TCCCTG-AGACTTGTGT--TGT-----GACATCGTG-AAGC--T-CG-------------------------------------------------TATGCAATAATGTACAAATATTTACG-CA---------
droSim2 3r:21050022-21050310 - dsi_10885 GTGCGATCAGAACAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCATAA-A-C--GAAT----ATT------TACTAGCTTTCTGT--TACC----TGC-----------T-----TTGC----------TT-GGT------------------------GTTGGT--------TGCCGC------AATAACTGAAATTATC--------GT-----AGATTTT----------T-TA---CTGCTTC-------------CC-TTTGGTGTTGGT-TG-CTA--TTTATTC----------TTAGATACTGTAGTGCACT----------------------------------------------------------A------TT-------------------CCCTGCACTTGACTGTGCCA------------------T-------------GAACA--CATG-------TCCCTG-CGACTTGTGT--TGT-----GCCATGGTG-AAGC--T-CG-------------------------------------------------TATGCAATAATGTACAAATATTTACG-CA---------
droSec2 scaffold_13:332768-333056 - GTGCGATCAGAACAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCATAA-C-C--GAAT----ATT------TACTAGCTTTCTGT--TACC----TGC-----------T-----TTGC----------TT-GGT------------------------GTTGGT--------GGCCGT------AATAACTGAAATTATC--------GT-----TGATTTT----------T-TA---CTGCTTC-------------CC-TTTGGTGTTGGT-TG-CTA--TTTATTC----------TTAGATACTGTAGTGCACT----------------------------------------------------------A------TT-------------------CCCTGCACTTGACTGTGCCC------------------T-------------GAACA--CATG-------TCCCTG-CGACTTGTGT--TGT-----GCCATGGTG-AAGC--T-CG-------------------------------------------------TATGCAATAATGTACAAATATTTACG-CA---------
droYak3 3R:24933652-24933960 + GTGCGATCAGAACAAGGATTGTCGCGATGGCAGCGATGAGGCGCAGTGCAGTAAGCCATAA-A-C--GAAT----ATT------TCCTAGCTACCGCT--TACCTATTTGC-----------T-----TTGC----------TT-GGT------------------------GTTGGTGT------TGCTTTTAGAGTAATAACCGAAATAATC--------GT-----AGATTTC----------T-TCTTTCTGCTTC-----TC------TT-TTTGGTGTTGGT-TG-ATA--TTTATAT----------CTAGATGCTATAGTGCACT----------------------------------------------------------A------TT-------------------CGCTGCACTTGACTGTGCCA------------------T-------------GAACACACATG-------TCCCTGAAGACTTGTGT--TGT-----GCCATGGTG-AAGC--T-CG-------------------------------------------------TATGCAATAATGTACAAATATTTACG-CA---------
droEre2 scaffold_4820:6502817-6503099 + GTGCGATCAGGCCAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCAAAA-C-C--AAAT----ATT------TCTTAGCTCTCCCT--AGCC----TGC-----------T-----TTGC----------TT-GGT------------------------GTTGGA--------TA--AT------AATAACTGAAATTATT--------GT-----AGAACTT----------T-CC---CTGCT-------------------TTGGTGTTGGT-TG-CTA--TTTATAT----------CTAGATACTACAATGCACT----------------------------------------------------------T------TT-------------------CCCTGCACTTGAATGTGCCA------------------T-------------GAGCA--CATG-------TCCCTG-AGACTTGTGT--TGT-----GTCCTGGCG-AAGC--T-CG-------------------------------------------------TATGCAATAATGCACAAATATTTACG-CA--------C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GTGCGATCAAAACAAGGACTGCGACGATGGCAGCGATGAGGCCCAGTGCAGTAAGCCTTCAAT-C----------ATA-------TCTAAGTTTCTGT--TTGC----TGC-----------AACTCTTTGT----------TTTGGT------------------------GTTGGTGAAATCTA----------------------TCTATC--------GT-----TCT---------------------------------------------------------------------------------------------------CT--------------ATCTGCCTTTCCTGCTACGT------TATA-----T--------------------------------------------------CTGT-T-------------------------------GACACA--CATT-TGTATTTCTCTG-AAAGTTGTGT--AATTCCACACTTACCTA-CTAC--T-CGTATATC-------------------------------------------CTACCAATAAAGCACAAATATTTACG-CA--------GSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................CTA----------------------TCTATC--------GT-----TCT---------------------------------------------------------------------------------------------------CT--------------ATCTGCC.............................................................................................................................................................................................................................................................................2311.0010001000000
..........AACAAGGACTGCGACGATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..............AGGACTGCGACGATGGCAGCGATGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100000
.............AAGGACTGCGACGATGGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......................GACGATGGCAGCGATGAGGCCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..........AACAAGGACTGCGACGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..........AACAAGGACTGCGACGATGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000001
.......................ACGATGGCAGCGATGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
--------------AGGACTGCGACGATCGCAGCGATGAGGCCCAGTGCAGTAAGCCTTCA--------AT----CAT------CTCTAGGTTTCTGT--TTGC----TGC-----------AACTCTTTGT----------TTTGGT------------------------GTTGGTGAAATCTA----------------------TCTATC--------GT---------------------------------------------------------------T-TG-CTA--TCTGC---------------------------------------------------CTTCCCTGCTACGT------TATATT--------AC-------------------------------------------------A------------------TGTATCCTCTGTTGACACA--CATGTTGTATTTCTCTG-AAAGTTGTGT--AATTCCACACTTACCTA-CTAC--TGCGTATATC-------------------------------------------CTACCAATAAAGCACAAATATTTACG-CA--------GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................GT--TTGC----TGC-----------AACTCTTTGT----------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501001000
....................................................................................................................................................................................................................................................................................................................................................................................................C-------------------------------------------------A------------------TGTATCCTCTGTTGACAC....................................................................................................................................................2020.501100000
droWil2
GTGTGATCAGAATAAAGATTGCAGTGATGGCAGCGATGAGGCCATGTGTAGTAAGCAAAAA-A-A--AAAA----ATTGAAATTCTTTAGAAATTCTTTAAATC----TGT-----------G-----TTGT----------AT-GGT------------------------GTTGGA--------TATACT------TATTATACTTTTATAT--------TT-----TGTATAT----------T-TA---TTGCTTATGTGTACCTACTTAT-GTTGGTGTGTGT------A--TGTTTAC----------CAA-------ACTTATGTTTTTATGTGCCTCATATCCTGGTTCCCTGCTAAGTAGACACAATACTACAT--------------------------------------------------ATAC-ATACATACATATGTATGTAT-------------GTATA--------------CCCTG-TAAACAGTGG--TCCCTTACAATAACGTT-CCTT--A-CATATTCCCCACCTAACTATATATAGAGTTTGAACTACCTAAAGCCCCCAAAAGGCAATAAAACACAAATATTTACG-CA--------CSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........ATAAAGATTGCAGTGATGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200020
................................................................................................................................................................................................................................................................CTTATGTGTACCTACTTAT-GTTG.......................................................................................................................................................................................................................................................................................................................................................2311.00100001
....................GCAGTGATGGCAGCGATGAGGCCAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
..........................................................................................................................................................................................................................................................................................GTGTGT------A--TGTTTAC----------CAA-------ACTT.......................................................................................................................................................................................................................................................................................................2111.00100010
........AGAATAAAGATTGCAGTGATGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.............AAAGATTGCAGTGATGGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.........GAATAAAGATTGCAGTGATGGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
............................................................................................................................................................................................................................................................................................................................................................................................CAT--------------------------------------------------ATAC-ATACATACATATGT...........................................................................................................................................................................21200.05100010
droVir3
GTGTGATCAGAACAAAGATTGCAGCGATGGCAGCGATGAGGCCACGTGCAGTAAGCCATAT-TTC--GCAA----ATT------TCTAATCTTAA-------GC----TGT-----------AACTGTTTGTAAGCTGTAACTAAAACTCTAGTTGTTGTAGTGTGCT------TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT------TGTG-----TGTGTACATACTTCAGCT-------------------TGCTGGAGATAAGTATGC-----------------------------------TACA--CTTT-------GCTACA-AGAATTGTGC--AAT-----ACTTACCTA-AACAATA-CA-------------------------------------------------CATGCAATAAAGCACAAATATTTACA-CA--------CSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................GCGATGAGGCCACGTGCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
..................TTGCAGCGATGGCAGCGATGAGGCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AGCT-------------------TGCTGGAGATAAGTATGC-----------------------------------TACA--CT...............................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
.......CAGAACAAAGATTGCAGCGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
....................................................................................................................................AAGCTGTAACTAAAACTCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-------GCTACA-AGAATTGTGC--...................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
................GATTGCAGCGATGGCAGCGATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................GTAACTAAAACTCTAGTTGTTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................TAAAACTCTAGTTGTTGTAGTGTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000001000000000000000000000000000000000000000000000000000000
..........AACAAAGATTGCAGCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
............................GGCAGCGATGAGGCCACGTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................TGTGCT------TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT------TGTG-----TGTGTACATACT.....................................................................................................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA--CTTT-------GCTACA-AGAATTGTGC--A..................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
..............................CAGCGATGAGGCCACGTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
........................CGATGGCAGCGATGAGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000010000000000000000000000000000000000000000000000000000
.....ATCAGAACAAAGATTGCAGCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000001000000000000000000000000000000000000000000000000000
....GATCAGAACAAAGATTGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
.....ATCAGAACAAAGATTGCAGCGATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GCT-------------------TGCTGGAGATAAGTATGC-----------------------------------TACA--C................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AGCT-------------------TGCTGGAGATAAGTAT............................................................................................................................................................................................2011.001000000000000000000000000000010000000000000000000000000000000000
.........GAACAAAGATTGCAGCGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
GTGCGATCAGAGCAAAGATTGCAGCGATGGCAGCGACGAGGCCACTTGTAGTAAGCCAGAC-T-T--AAAGAAATGTT------TCCAAACCTAA------CTG----TGC-----------T-TTGCTTGTACACTGTAACTAAAGC------------------------TTTAGC--------TGTAAT------AGT----------------------------GTGTGCTCTAGTGCTCTCTCT---CTG-----------------------AGTATGTGT-GC-GTG--TGTGTTT----------GTACATACTTCAT-----------------------------------------------------------------------CT-------------------TGTTGCCCATAAGTATGA-----------------------------------TACA--CATT-------GCTGCA-AGTATTGTGT--AAT-----ACTTACCTA-AACAATA-CA-------------------------------------------------CTTGCAATAGAGCACAAATATTTACA-CA--------CSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTTT----------GTA..................................................................................................................................................................................................................................................................................................................22160.006015145035
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTTT----------GT...................................................................................................................................................................................................................................................................................................................21615.50931801312050
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTTT----------G....................................................................................................................................................................................................................................................................................................................2097.5668250314026
...................................................................................................................................................................................................................................................TCTCTCT---CTG-----------------------AGTATGTGT-GC-GT.........................................................................................................................................................................................................................................................................................................................................2313.003101001
................................................................................................................................................................................................................................................TGCTCTCTCT---CTG-----------------------AGTATGTGT-GC-GT.........................................................................................................................................................................................................................................................................................................................................2612.002000002
..................................................................................................................................................................................................................................................CTCTCTCT---CTG-----------------------AGTATGTGT-GC-GT.........................................................................................................................................................................................................................................................................................................................................2412.002000002
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTTT----------.....................................................................................................................................................................................................................................................................................................................19171.71296037013
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTTT----------GTC..................................................................................................................................................................................................................................................................................................................22201.25258032012
..........................................................................................................................................................................................................................................................................................ATGTGT-GC-GTG--TGTGTTT----------GTA..................................................................................................................................................................................................................................................................................................................2111.001100000
.............AAAGATTGCAGCGATGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000100
...............................................................................................................................................................................................................................................GTGCTCTCTCT---CTG-----------------------AGTATGTGT-GC-GT.........................................................................................................................................................................................................................................................................................................................................2711.001000001
..................TTGCAGCGATGGCAGCGACGAGGCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTTT----------GTAC.................................................................................................................................................................................................................................................................................................................2311.001100000
..........................................................................................................................................................................................TGTAAT------AGT----------------------------GTGTGCTCT.................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
........AGAGCAAAGATTGCAGCGATGGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...................................................................................................................................................................................................................................................TCTCTCT---CTG-----------------------AGTATGTGT-GC-GTG--T.....................................................................................................................................................................................................................................................................................................................................2511.001100000
.....................................................................................................................................................................................................................................................................................................TG--TGTGTTT----------GTACATACTTCAT-----------------------------------------------------------------------C................................................................................................................................................................................................................................2311.001100000
......................................................................................................................................................................................................................................................CTCT---CTG-----------------------AGTATGTGT-GC-GTG--TGT...................................................................................................................................................................................................................................................................................................................................2411.001000001
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTTT----------C....................................................................................................................................................................................................................................................................................................................20200.204001003
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTT................................................................................................................................................................................................................................................................................................................................18200.204200200
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTTT----------GTT..................................................................................................................................................................................................................................................................................................................22200.153000003
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTTT----------GTAA.................................................................................................................................................................................................................................................................................................................2390.111000001
.........................................................................................................................................................................................................................................................................................TATGTGT-GC-GTG--TGTGTTT----------GTAT.................................................................................................................................................................................................................................................................................................................23200.102000002
..........................................................................................................................................................................................................................................................................................ATGTGT-GC-GTG--TGTGTTT----------GT...................................................................................................................................................................................................................................................................................................................20100.101100000
..........................................................................................................................................................................................................................................................................................ATGTGT-GC-GTG--TGTGTTT----------G....................................................................................................................................................................................................................................................................................................................19130.081100000
droGri2
GTGTGATCAGAGCAAAGATTGCAGCGATGGCTCCGATGAGGCCACGTGCAGTAAGCCATCA-A-A--TTTT----AAT------CTCTA------TTT--TAAC----TG----------------------------TAACTAAAGC------------------------CCTGTC--------GGCAGT------AGTAT-CGTAATTCTCTTATGTATTTAGTTTA-------------------G---CTGCTCT--------------C-TG-TGTATTTGT-GT-GTG--TGTGTGTGTGTGTGTGTGTGGC--AGTTAGTGTGCG------------------------------------------------------ACACACTTAATTT-------------------TGCTGGCCATAAGTGTGC-----------------------------------TACA--CATT-------GCTGCA-AGAATTGTGT--ATT-----ACTTACCTA-AACAATA-CT-------------------------------------------------CATGCAATAAAGCACAAATATTTACA-CACACTCGCACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................AGCGATGGCTCCGATGAGGCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
droAna3
GTGCGATCAGCACAGCGACTGTCGGGACGGAAGCGACGAGGCCCAGTGCAGTAAGCCCCTA-----------------------------------------TC----TGC-----------T-----TTGTTTG-------TT-GGT------------------------GTTGGC--------TAT--------------------CTTCT--------GT-----TGCATAT----------A-CC---CCGCTTTTACCCTC------TA-CTTGGTGTCGGT-TG-CTA--TATCT--------------A-------TAACACGCTATCCTATACTTTATGTCC------------------------------------------------C-------------------AGCTGCACTTGAGAGTGCCA------------------A-------------GCACA--CATT-------TCCCAG-GAAATTGTGT--AAT-----GCCCTGCTTAAAGA--T-TG-------------------------------------------------TACGTTATAAAGCACAAATATTTGCT-AACACACACAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........ACAGCGACTGTCGGGACGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
....................GTCGGGACGGAAGCGACGAGGCCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
GTGCGATCAGCACAGCGACTGTCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
................GACTGTCGGGACGGAAGCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
............................GGAAGCGACGAGGCCCAGTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
..............GCGACTGTCGGGACGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
droBip1
GTGCGATCAGCACAGTGACTGCCGGGACGGAAGCGACGAGGCCCAGTGCAGTAAGCCATTA-T-C-------------------------------------------TGA-----------------TTGTTTG-------TT-GGT-----------------GTT------TGGC--------TA------------T-----------GT--------CT-----TGAATAT----------A-CC---CCGCTTTTACCCTG------TA-CTTGGTGTCGGT-TG-CAATATCTATAT----------CTA-------TATCACACTATCCTATGCTTTATAACA------------------------------------------------C-------------------AGCTGCACTTGAGAGTTCCA------------------A-------------GCACA--CATT-------TTCCAG-GAAATTGTGT--AAT-----GCCCTGCTTAAAGA--T-TG-------------------------------------------------TATGCTATAAGGCACAAATATTTGCGAAACTCACACAASizeHit CountTotal NormTotal
No Reads
droKik1
GTGCGATCAGAACAAAGATTGTCGCGACGGAAGCGATGAGGCCCAGTGCAGTAAGCCAAAA-C-C--AAAT----CAA------TGCTAGCTTTCTAT-----C----TGTTCTGTACTTATTCCTCTGCGC----------TT-GGT------------------------GTTGGC--------TGCTTT------AAC----------------------------------------------------CTGCT------------------------------------C--TATA--------------TATATACTGT----TACTATCCC-----------------------------------------------------A------CTTTACTTTCTCCTCTTCTTACCCAGCTCTTGAGTATAT-A---------------------------------CACACACATA-----TTTCTGTG-GAAATTGTGT--AAT-----GCCATGCTT-AAAC--T-CG-------------------------------------------------CATGCAATAAAGCACAAATATTTACA-CA--------ASizeHit CountTotal NormTotal
No Reads
droFic1
GTGCGATCAGACCAAAGATTGCCGCGACGGAAGCGATGAGGCCCAGTGCAGTAAGCCATAA-C-C--GATT----ATT------TCCTAGCCT-CTTT--TAC--------------------------TGC----------TT-GGT------------------------GTTGGT--------TGCTTT------AATAACGGAATTTTAT--------TT-----GGATTTT----------T-CC---CCTTTTA-------------TG-CTTGGTGTTGGT-TG-CTT--TTTGTTC----------CCGTAGACTGTAGTGTATT----------------------------------------------------------T------TT-------------------CCCTGCACTTAAGTGTGCCA------------------T-------------GAACA--CATT-------TCCCTG-AAACTTGTGTGTGATGCTATGCTATGCTA-AAAC--T-CG-------------------------------------------------CATGCAATAAAGCACAAATATTTACG-CA---------SizeHit CountTotal NormTotal
No Reads
droEle1
GTGCGATCAGAACAAAGATTGCCGCGATGGAAGCGATGAGGCCCAGTGCAGTAAGCCAAAA-T-C--GAAT----ATT------CCTTAGACTTTT-----CTC----TGT-----------T---TTTTGC----------TT-GGT------------------------GTTGGC--------TGCTTT------AATATACGCAATTATC--------TT-----AGATT-T----------T-CA---CTGCCTT-------------TG-CTTGGTGTTGGT-TG-CTA--TTTATTT----------CTAGATGCTGTACCGAACT----------------------------------------------------------A------TT--------------------CCTGCACTTGACTGTGCCA------------------T-------------GCACA--CATT-------TCTCGA-AGAATTGTGT--AAT-----GCCATGTTA-AAAC--T-CG-------------------------------------------------TATGCAATAAAGCACAAATATTTACG-CA--------TSizeHit CountTotal NormTotal
No Reads
droRho1
GTGCGATCAACACAAAGATTGCCATGATGGAAGTGATGAGGCTCAGTGCAGTAAGCCATAA-C-C--GAAT----ATT------CCTAAGTCCTTTTC---TCT----TGT-----------T----TTTGC----------TT-GGT------------------------GTTGGC--------TGCTAT------AATAACCGTAATTTAT--------TT-----CGATT-T----------T-CC---CTGCTTT-------------TG-CTTGGTGTTGGT-TG-CAA--TTTATTT----------CTATATATTATATTGTAGA----------------------------------------------------------A------TT-------------------CCCTACACTTGACTTTACTA------------------T-------------GCACA--CATT-------TCTCTG-AGCATTGTG-----------------CTA-AAAC--T-CG-------------------------------------------------TATGCAATAAACCACAAATATTAACG-C----------SizeHit CountTotal NormTotal
No Reads
droBia1
GTGTGACCAGAACAAGGATTGTCGCGACGGAAGCGATGAGGCCCAGTGCAGTAAGCCATAA-C-C--GAAT----ATT------TCCTAGCTTTC------------------------------------T----------TT-GGT------------------------GCTGGT--------TGCCAT------AATAACCGAATTTATC--------CT-----TGATTTT----------T-CT---CTGCCCT-------------TC-CTTGGTGTTGGTTTG-CTA--TTTATCC------------------------GTATT----------------------------------------------------------T------AT-------------------CCCTGCACTCGACTGTGCCA------------------A-------------GCACA--CATT-------TCCCCG-AGTCTAGTGT--AAT-----GCCATGCTT-AAGC--C-AG-------------------------------------------------TATGCAATAGAGCACAAATATTTGCG-AA--------ASizeHit CountTotal NormTotal
No Reads
droTak1
GTGCGATCAGACCAAGGATTGTCGCGATGGCAGCGACGAGGCCCAGTGCAGTAAGCCATGA-C-CATGAAT----ATT------TCCC---------------------GC-----------T-----TTGCTTT-------TT-GGT-----------------GCTTGGTTCTGGT--------TGCAAT---AATAGCAACCGAATTTATC--------TT-----TGATTTT----------T-CC---TTGCTTT-------------TA-TTTGGTGTTGGC-TG-CTA--TTTATAC----------CCGAATGCTTTAGTGAACT----------------------------------------------------------A------CT-----------------CCCCCTGCACTTGAATGTGCCA------------------T-------------GCACACTCAGT-------TCTCTG-AGA-----------T-----GCTTTGCTA-AAAC--T-AT-------------------------------------------------TATGCAATAGAGCACAAATATTTACG------------SizeHit CountTotal NormTotal
No Reads
droEug1
GTGCGATCAGAGCAAGGATTGTCGCGATGGAAGCGATGAGGCGATGTGCAGTAAGCCAAAAAC-C--GAAT--ATATT------TCTTAGCTTGCTTT--TGC------A----------------CTTTGC----------TTACGT------------------------GTTGGT--------TGCAAT------AATAACCGAATTTATC--------TT-----AGATTTT----------TTCA---CTGCTTT-------------TGTTTTGGTGTTGGTTTG-GTA--TTTTTTC----------CTATATGCTATAGTGTACT------------------------------------------------------ACACA------CC-------------------CCCTGCACTCGACTGTGTCA------------------T-------------GCACA--CATT-------TCCCGA-AGACTTGTGTGTAAT-----GCCATGCTG-AAAC--T-CG-------------------------------------------------TATGCAATAAAGCTCAAATATTTACG-CA--------CSizeHit CountTotal NormTotal
No Reads
dm3
GTGCGATCAGAACAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCATAA-C-C--GAAT----ATT------TCCTAGCTCTCTGT--TACC----TGC-----------TTTGCTTTGC----------TT-GGT------------------------GTTGGT--------TGCCGT------AATAATTGAAATTATC--------GT-----AGATTTT----------T-CC---CTGCTTT-------------CC-TTTGGTGTTGGT-TGCTTA--TTTATTT----------CTAGATACTGTAGTGCACT----------------------------------------------------------A------TT-------------------CCCCGTACTTGACTGTGCCA------------------T-------------GAACA--CATG-------TCCCTG-AGACTTGTGT--TGT-----GACATCGTG-AAGC--T-CG-------------------------------------------------TATGCAATAATGTACAAATATTTACG-CA---------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................GATGGAAGCGATGAGGCGCAGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23111.001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCA------------------T-------------GAACA--CATG-------TCCCTG-AGAC...........................................................................................................................27111.001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011
....................................................................................................TACC----TGC-----------TTTGCTTTGC----------TT-GGT------------------------GTTGGT--------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009
......TCAGAACAAAGATTGTCGCGATGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........AGAACAAAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010201000000
........................CGATGGAAGCGATGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000101000000
............CAAAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..................TTGTCGCGATGGAAGCGATGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
..........................................................TAA-C-C--GAAT----ATT------TCCTAGCTCTCTGT--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AAAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GATGGAAGCGATGAGGCGCAGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................GATGGAAGCGATGAGGCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................GCGATGGAAGCGATGAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000001000000
......TCAGAACAAAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................CGATGGAAGCGATGAGGCGCAGTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000001000000
.....ATCAGAACAAAGATTGTCGCGATGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TCAGAACAAAGATTGTCGCGATGGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TCAGAACAAAGATTGTCGCGATGGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000
...................TGTCGCGATGGAAGCGATGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TT----------T-CC---CTGCTTT-------------CC-TTTGGTGTTGGT-..............................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATTGTCGCGATGGAAGCGATGAGGCGCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002
......................CGCGATGGAAGCGATGAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................T-CC---CTGCTTT-------------CC-TTTGGTGTTGGT-..............................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CGCGATGGAAGCGATGAGGCGCAGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............AAAGATTGTCGCGATGGAAGCGATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............AAAGATTGTCGCGATGGAAGCGATGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AAGATTGTCGCGATGGAAGCGATGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTCGCGATGGAAGCGATGAGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTCGCGATGGAAGCGATGAGGCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...CGATCAGAACAAAGATTGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................AAGCGATGAGGCGCAGTGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAAAGATTGTCGCGATGGAAGCGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
................................GCGATGAGGCGCAGTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TTATTT----------CTAGATACTGTAGTGCACT----------------------------------------------------------........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AACAAAGATTGTCGCGATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAAAGATTGTCGCGATGGAAGCGATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCA------------------T-------------GAACA--CATG-------TCCCTG-AGA............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
...........ACAAAGATTGTCGCGATGGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GATTGTCGCGATGGAAGCGATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................T-------------CC-TTTGGTGTTGGT-TGC...........................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AGAACAAAGATTGTCGCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AAAGATTGTCGCGATGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..........................ATGGAAGCGATGAGGCGCAGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........ACAAAGATTGTCGCGATGGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................GCGATGGAAGCGATGAGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...........ACAAAGATTGTCGCGATGGAAGCGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CGCGATGGAAGCGATGAGGCGCAGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGT--TGT-----GACATCGTG-AAGC--T-CG-------------------------------------------------......................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATCGTG-AAGC--T-CG-------------------------------------------------TATGCAATAA............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................GTTGGT-TGCTTA--TTTATTT----------CTAGATAC.............................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCGCGATGGAAGCGATGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................GCGATGGAAGCGATGAGGCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTCGCGATGGAAGCGATGAGGCGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CAGAACAAAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................GCGATGGAAGCGATGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGTCGCGATGGAAGCGATGAGGCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CGCGATGGAAGCGATGAGGCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................CGCGATGGAAGCGATGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................GATTGTCGCGATGGAAGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...............................AGCGATGAGGCGCAGTGCAGTAAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................TGTCGCGATGGAAGCGATGAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAAAGATTGTCGCGATGGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................ATTGTCGCGATGGAAGCGATGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................TGAGGCGCAGTGCAGTAAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
................GATTGTCGCGATGGAAGCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CGCGATGGAAGCGATGAGGCGCAGTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCTG-AGACTTGTGT--TGT-----GACATCGT...................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AA-C-C--GAAT----ATT------TCCTAGCTCTCTGT--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TCAGAACAAAGATTGTCGCGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................C--GAAT----ATT------TCCTAGCTCTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAAAGATTGTCGCGATGGAAGCGATGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............AAAGATTGTCGCGATGGAAGCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AGCGATGAGGCGCAGTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GATGGAAGCGATGAGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GCGATGGAAGCGATGAGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
droSim2
GTGCGATCAGAACAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCATAA-A-C--GAAT----ATT------TACTAGCTTTCTGT--TACC----TGC-----------T-----TTGC----------TT-GGT------------------------GTTGGT--------TGCCGC------AATAACTGAAATTATC--------GT-----AGATTTT----------T-TA---CTGCTTC-------------CC-TTTGGTGTTGGT-TG-CTA--TTTATTC----------TTAGATACTGTAGTGCACT----------------------------------------------------------A------TT-------------------CCCTGCACTTGACTGTGCCA------------------T-------------GAACA--CATG-------TCCCTG-CGACTTGTGT--TGT-----GCCATGGTG-AAGC--T-CG-------------------------------------------------TATGCAATAATGTACAAATATTTACG-CA---------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......TCAGAACAAAGATTGTCGCGATGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.00400000020020000000
.....................................................................................................................................................................................................................................................................................................TA--TTTATTC----------TTAGATACTGTAGTGCACT----------------------------------------------------------A------.................................................................................................................................................................................................................................2913.00300000012000000000
.......CAGAACAAAGATTGTCGCGATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
......TCAGAACAAAGATTGTCGCGATGGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
.............AAAGATTGTCGCGATGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
......TCAGAACAAAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
......TCAGAACAAAGATTGTCGCGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000010000000
.......CAGAACAAAGATTGTCGCGATGGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCACTTGACTGTGCCT------------------......................................................................................................................................................................1811.00101000000000000000
............CAAAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
..................................GATGAGGCGCAGTGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1640.25100000000001000000
droSec2
GTGCGATCAGAACAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCATAA-C-C--GAAT----ATT------TACTAGCTTTCTGT--TACC----TGC-----------T-----TTGC----------TT-GGT------------------------GTTGGT--------GGCCGT------AATAACTGAAATTATC--------GT-----TGATTTT----------T-TA---CTGCTTC-------------CC-TTTGGTGTTGGT-TG-CTA--TTTATTC----------TTAGATACTGTAGTGCACT----------------------------------------------------------A------TT-------------------CCCTGCACTTGACTGTGCCC------------------T-------------GAACA--CATG-------TCCCTG-CGACTTGTGT--TGT-----GCCATGGTG-AAGC--T-CG-------------------------------------------------TATGCAATAATGTACAAATATTTACG-CA---------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........ACAAAGATTGTCGCGATGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.......................GCGATGGAAGCGATGAGGCGCAGTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
.........................GATGGAAGCGATGAGGCGCAGTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
droYak3
GTGCGATCAGAACAAGGATTGTCGCGATGGCAGCGATGAGGCGCAGTGCAGTAAGCCATAA-A-C--GAAT----ATT------TCCTAGCTACCGCT--TACCTATTTGC-----------T-----TTGC----------TT-GGT------------------------GTTGGTGT------TGCTTTTAGAGTAATAACCGAAATAATC--------GT-----AGATTTC----------T-TCTTTCTGCTTC-----TC------TT-TTTGGTGTTGGT-TG-ATA--TTTATAT----------CTAGATGCTATAGTGCACT----------------------------------------------------------A------TT-------------------CGCTGCACTTGACTGTGCCA------------------T-------------GAACACACATG-------TCCCTGAAGACTTGTGT--TGT-----GCCATGGTG-AAGC--T-CG-------------------------------------------------TATGCAATAATGTACAAATATTTACG-CA---------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................GATGGCAGCGATGAGGCGCAGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
....................................................................................................................................................................................................................................................................................................ATA--TTTATAT----------CTAGATGCTATAGT.......................................................................................................................................................................................................................................................................................................2411.00100000010000
..................................GATGAGGCGCAGTGCAGTAAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...........ACAAGGATTGTCGCGATGGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
......................CGCGATGGCAGCGATGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...............GGATTGTCGCGATGGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
droEre2
GTGCGATCAGGCCAAAGATTGTCGCGATGGAAGCGATGAGGCGCAGTGCAGTAAGCCAAAA-C-C--AAAT----ATT------TCTTAGCTCTCCCT--AGCC----TGC-----------T-----TTGC----------TT-GGT------------------------GTTGGA--------TA--AT------AATAACTGAAATTATT--------GT-----AGAACTT----------T-CC---CTGCT-------------------TTGGTGTTGGT-TG-CTA--TTTATAT----------CTAGATACTACAATGCACT----------------------------------------------------------T------TT-------------------CCCTGCACTTGAATGTGCCA------------------T-------------GAGCA--CATG-------TCCCTG-AGACTTGTGT--TGT-----GTCCTGGCG-AAGC--T-CG-------------------------------------------------TATGCAATAATGCACAAATATTTACG-CA--------CSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............AGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000020
......................CGCGATGGAAGCGATGAGGCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000110
.............AAAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.......CAGGCCAAAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
............CAAAGATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
................GATTGTCGCGATGGAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000

Generated: 05/17/2015 at 11:11 PM