ID:

dps_713

 Coordinate:

2:22307500-22307686 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.9 -14.5 -14.2

Flybase annnotation

exon [Dpse\GA18365:3]; exon [Dpse\GA18365:4]; CDS [Dpse\GA18365-cds]; CDS [Dpse\GA18365-cds]; exon [Dpse\GA18365:1]; CDS [Dpse\GA18365-cds]; intron [Dpse\GA18365-in]; CDS [Dpse\GA18365-cds]; exon [Dpse\GA18365:2]; intron [Dpse\GA18365-in]

No Repeatable elements found

Sense Strand Reads

##############################################################################################################################################################-------------------------------------------------------------------------------##################################################
TGTATCAGAAGTTGAAGCAGAGGTAGTAGTCGCAGGGGAATCCACAACGGGTGAGCCACAAATCGATCTGCTTGAGCCGATGGAATTGGAGCTACCAGCGACGACGACGTCGGCGCCATTAGAGGAGTTGCCAAAGATCGAAACGGATGACATAGAGGGTAAGTTAGAGAACGGAAAGACGAGAGAGAGCACTTTCCATTCATACTCTCTTCTACTCCATCTCTTCGATTTTCACAGAGCGCCTCAGCCAGTTGGATGGCAATGCTAGTGCCATTTTGCCTGCAGTG
******************************************************************************(((....((((((((.((.(((.((((...)))).))).......)))))).))))..)))...............************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR902011
testis
 V112
male body		 M040
female body
 M059
embryo
 GSM343916
embryo
 GSM444067
head
 SRR902010
ovaries
.........AGTTGAAGCAGAGGTAGTAG.................................................................................................................................................................................................................................................................. 20 0 1 5.00 5 5 0 0 0 0 0 0
....................................................................................................................................AAAGATCGAAACGGATGACATA..................................................................................................................................... 22 0 1 3.00 3 3 0 0 0 0 0 0
......................GTAGTAGTCGCAGGGGAATC..................................................................................................................................................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0
................................................................................................................................................GGACGTCATAGAGGGTGAG............................................................................................................................ 19 3 19 1.79 34 0 1 33 0 0 0 0
...................................................................................................................................CAAAGATCGAAACGGATGAC........................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................GTCGGCGCCATTAGAGGAGTTG............................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0 0
................................................................................................................................................GGATGTCATAGAGGGTGAG............................................................................................................................ 19 2 1 1.00 1 0 0 1 0 0 0 0
.......................TAGTAGTCGCAGGGGAATCC.................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
...........TTGAAGCAGAGGTAGTAG.................................................................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................GATGGAATTGGAGCTACCA.............................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0
.............GAAGCAGAGGTAGTAGTCGCAGGGGA........................................................................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0
.....................................................................................TTGGAGCAACCAGCGACGACGACG.................................................................................................................................................................................. 24 1 1 1.00 1 0 0 1 0 0 0 0
.....CAGAAGTTGAAGCAGAGGTAG..................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
.......................................................CCACAAATCGATCTGCTTGAG................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................GTTGCCAAAGATCGAAACGGA............................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0
..........................................................................................GCAACCAGCGACGACGACGTC................................................................................................................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0 0
........................................TCCACAACGGGTGAGCCACAAATC............................................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0
.........................................................ACAAATCGATCTGCTTGAGC.................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 1 0
.............GAAGCAGAGGTAGTAGTCG............................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0
.......GAAGTTGAAGCAGAGGTAGTA................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
.........................................................................................................................................TCGAAACGGATGACATAGAGG................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................TTTTCACAGAGCGCCTCAGCC...................................... 21 0 1 1.00 1 0 0 1 0 0 0 0
............TGAAGCAGAGGTAGTAGTCG............................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................................ATGGAATTGGAGCTACCAGC............................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................TGGAGCAACCAGCGACGACGACG.................................................................................................................................................................................. 23 1 1 1.00 1 0 0 1 0 0 0 0
.........AGTTGAAGCAGAGGTAGTAGA................................................................................................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................ATTGGAGCAACCAGCGACGACGA.................................................................................................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0
...........................................................................................................CGTCGGCGCCATTAGAGGAG................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0
...........................AGTCGCAGGGGAATCCACA................................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0
AGTATCAGAAGTTGAAGCAGAGGT....................................................................................................................................................................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0
..........................................................................................................ACGTCGGCGCCATTAGAGG.................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................................................AAAGATCGAAACGGATGACAT...................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................GGTTGAGCCGATGGAATTGGAGC................................................................................................................................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0 0
..........GTTGAAGCAGAGGTAGTAG.................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0
..................AGAGGTAGTAGTCGCAGG........................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0
........................................................CACAAATCGATCTGCTTGAG................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0
....TCAGAAGTTGAAGCAGAGGTA...................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
....TCAGAAGTTGAAGCAGAGG........................................................................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................GTCGGCGCCATTAGAGGA................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 1 0 0
..................AGAGGTAGTAGTCGCAGGG.......................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0
..........................................CACAACGGGTGAGCCACAAATCGA............................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0 0
.........................................................................GAGCCGATGGAATTGGAGC................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0
.........AGTTCAAGCAGAGGTAGTAG.................................................................................................................................................................................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................GCTGCCAAAGATCGAAACGGA............................................................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................................................CGGACGTCATAGAGGGTGAG............................................................................................................................ 20 3 3 0.33 1 0 1 0 0 0 0 0
....................................................................TGTTTGAGCCGATTGAACTGGAG.................................................................................................................................................................................................... 23 3 3 0.33 1 0 1 0 0 0 0 0
................................................................................................................................................................................AGAAGAGAGAGAGCACT.............................................................................................. 17 1 6 0.33 2 0 0 0 0 0 0 2
............................................................................................................................................AACCGGACGTCATAGAGGGT............................................................................................................................... 20 3 3 0.33 1 0 1 0 0 0 0 0
........ATGATGAACCAGAGGTAGTA................................................................................................................................................................................................................................................................... 20 3 5 0.20 1 0 1 0 0 0 0 0
............................................................................................................................................................................................GAACTTTTCATTCATACTGTC.............................................................................. 21 3 7 0.14 1 0 0 0 0 1 0 0
.............................................................................................................................................................................TGACGACGAGAGAGAGCACT.............................................................................................. 20 3 8 0.13 1 1 0 0 0 0 0 0
...............................................................................................................................................AGGATGTCATAGAGGGTGAG............................................................................................................................ 20 3 9 0.11 1 0 0 1 0 0 0 0
........................................................................................................................................................................................................................TCAACTCTTGGATTTTCACA................................................... 20 3 13 0.08 1 0 1 0 0 0 0 0
....................................................................................................................................................................................................................................TTTTCAAAGAGCGCATCAGA....................................... 20 3 14 0.07 1 0 0 1 0 0 0 0
.................................................................................................................................................GATGATCTAGATGGTAAGT........................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0 0

Anti-sense strand reads

ACATAGTCTTCAACTTCGTCTCCATCATCAGCGTCCCCTTAGGTGTTGCCCACTCGGTGTTTAGCTAGACGAACTCGGCTACCTTAACCTCGATGGTCGCTGCTGCTGCAGCCGCGGTAATCTCCTCAACGGTTTCTAGCTTTGCCTACTGTATCTCCCATTCAATCTCTTGCCTTTCTGCTCTCTCTCGTGAAAGGTAAGTATGAGAGAAGATGAGGTAGAGAAGCTAAAAGTGTCTCGCGGAGTCGGTCAACCTACCGTTACGATCACGGTAAAACGGACGTCAC
*************************************************************************************************************************************(((....((((((((.((.(((.((((...)))).))).......)))))).))))..)))...............****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011
testis
 M040
female body
 V112
male body		 M022
male body		 M062
head
 GSM444067
head
 M059
embryo
.................................................................AAGACGAACTCGGCTACCTTAA........................................................................................................................................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0 0
.................................................................................CCTTAACCTCGTTGGTCGCTGC........................................................................................................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0 0
..................................................CACTCGGTGTTTAGCTAGAC......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................GCTGCTGCAGCCGCGGTAATC..................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0
......................................................CGGTGTTTAGCTAGACGAAC..................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0
..................................................CACTCGGTGTTTAGCTAGA.......................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................AGCTAGACGAACTCGGCTACC............................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................CTGCTGCAGCCGCGGTAATC..................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................................CGCGGAGTCGGTCAACCTACC............................ 21 0 1 1.00 1 0 1 0 0 0 0 0
......................................................CGGTGTTTAGCTAGACGAACT.................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................................TCTCGCGGAGTCGGTCAACCT............................... 21 0 1 1.00 1 0 0 0 1 0 0 0
.......................................................GGTGTTTAGCTAGACGAAC..................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................CCTCGTTGGTCGCTGCTGCT.................................................................................................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0
................................................................CTAGACGAACTCGGCTACCTT.......................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................TGTGTGGCTAGACGAACTC................................................................................................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 0 0 1
.................................................................................................................................................................................................................................GCGAAAAGTTTCTCGCGTAG.......................................... 20 3 7 0.14 1 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................................AAAGTTTCTCGCGTAGTCTG...................................... 20 3 13 0.08 1 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:22307450-22307736 + dps_713 TGTATCAGAAGT---------------------------TGAAGCAG---AGG--TAG--TAGTCGCAG--------------G-------------------------------------------------------------------------GGAATCCACAACGGGTGAGCCACAAATCGATCTGCTTGAGCCGATGGAATTGGAGCTACCAGCGACGACGACGTCGGCGCCATTAGAGGAGTTGCCAAAGATCGAAACGGATGACATAGAGGGTAAGTTAG--AGA------AC------GGAAAGACGAGAGAGAGCACTTTCCATTCATACT--CT-CTTCT--AC-T------------CCATCTCTTCGATT--TTCACAGAGCGCCTCAGCCAGTTGGATGGCAATGCTAGTGCCATTTTGCC------------------TGCAGTG
droPer2 scaffold_3:5087699-5087985 + TGTAGCAGAAGT---------------------------TGAAGCAG---AGG--TAG--TAGTCGTAG--------------G-------------------------------------------------------------------------GGAATCCACAACGGGTGAGCCACAAATCGATCTGCTTGAGCCGATGGAATTGGAGCAACCAGCGACGACGACGTCGGCGCCATTAGAGGAGTTGCCAAAGATCGCAACGGATGATATAGAGGGTAAGTTAG--AGA------AC------GGAAAGACGACAGAGAGCACTTTCCATTCATACT--CT-CTTCT--AC-T------------CCATCTCTTCGATT--TTCACAGAGCGCCTCAGCCAGTTGGATGGCAATGCTAGTGCCATTTTGCC------------------TGCAGTG
droWil2 scf2_1100000004943:8718611-8718879 + AACATCCGATGC---------------------------TGTGGCAG---ATG--TCG--TCGTCTCAACATCGTCGGGATCTGGGATTACACCGCCCATGTTGGGATTGTCCACAAGTATATCAGATGTTTCAACGCCGCCGCAATCATTTGAGGAGA---------------------------------------------------------------------------------------AGCTGCTAAAGCAAGA---TGATAGTTTCGAAAGTATGTTTT--TGTTTTTGTAGACATATTGAAATACCTGAG---------------TATT-C--TCTGATATAAAA-T------------TGTTTATCTTTTAT--ATGACAGAACGCCTTAGCCTCTTGGATGGGAGTTCTTCTGCCG--------------------------------
droVir3 scaffold_13047:2008434-2008515 - TTC------------CCTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCACAGAACGCCTTAGTCAACTGGATGGCAACCCGAGCGTTGTGTTGCCGCCCATTGTGGATATAAGCGCGGCG
droMoj3 scaffold_6473:9275868-9275989 + AGCAACAGCAGC---------------------------AGGAGCAA---CAG--AAA--CAGCAGCAG--------------G-------------------------------------------------------------------------GGCTATAACTGCAGGA--GCAGCAAATACAAGAGCAACGGCAGCAGGAGAAGCAGCAA-CAGCAGCAACACCATCAACCTCATCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGG----------------------------------
droGri2 scaffold_15126:2790697-2790743 + AACATCAGCAGC---------------------------AGCAGCAG---CAG--CAG--CAACAACAG--------------G-------------------------------------------------------------------------AGC--------------------------------------------------------------------------------------AGCAACAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13340:16225799-16226003 + GCC---------------------C-------AAAG-TCCGCCGTAGAAGTGGCA--GTG-----GCCG--------------G---------------------------CC----AGTTA------------C------TGATCCCCGCCACGGAGG---------------------------------------------------------------------------------------AGCTGCCAAAGATAGAAACCGATAACTTGGAGGGTAAGTGCGACTAG------CGA----------------------CATTTCTAACTTACC-T--CCCGTTTCAACGAT------------TTCCATCGCCTGCTTGTTTTCAGAACGCCTTAGTCAGCTGGATGGCAACGCCAGTGGGATTCCC--------------------------G
droBip1 scf7180000396708:3816791-3816990 - TCG----------------------------GAGGAGTCCGGAGGAGGAGTGGCA--GTG-----GCTG--------------G---------------------------CC----AGCTA------------C------TGATCCCTGCCGTGGAGG---------------------------------------------------------------------------------------AGCTGCCAAAGATAGAAACCGATAACTTGGAGGGTGAGTGGC--TAG------CGA----------------------CATTTCCAACTTACA-T--GCCGTTTCAATGAT------------TTTCATGGCCTGCTTGTTTTCAGAACGCCTTAGTCAGTTGGATGGCAACGCCAGTGGGATT------------------------------
droKik1 scf7180000302639:1064847-1065049 - TCGACC----------------ACCGAATCCCCAGGTGTCAGCGGAG---AGGCA--GCA--GCTGAGG--------------A----------------------------------TCAG------------T------CAATTCCAGCCGAGGAGG---------------------------------------------------------------------------------------AGCTGTCCAAGATCGAAACAGATAATATAGAGGGTAAGTGTA--AAT-----------------------------------------------T--TTTAACTGAAAA-CCAAAAGCTTACCTGTTTTGGCATACT--TTTTTAGAGCGCCTCAGTCAGCTGGATGGCAATGTTATTGCCATGTCA---------------------------
droFic1 scf7180000452523:992745-992955 + GGC------------AGTGGCCACCGGATCTACAAGTTC-----------CGGAA--GCG---------------------------------------------------------CGTTGATAGGGGAAGTCC------CGATGTCTGCAGCGGATG---------------------------------------------------------------------------------------AACTGCAAAAGATGGAAACAGATAATATAGAGGGTAAGTCCA--AAC------GGT----------------------TACTCGAAATGAGACGC--GTCAATTCAATG-T------------TTTCTTGGCTTACT--ATTTTAGAGCGTCTCAGCCAGCTGGATGGAAATGCCAGTGTTATGCTG---------------------------
droEle1 scf7180000491080:1394122-1394323 + C---------------------ACCAGTTCTGCGAATTC-----------CGGAA--GCG---------------------------------------------------------GTTTGTCAGGAGATACCT------CCGTATCCTCAGCGGTGG---------------------------------------------------------------------------------------AGCTGCCAAAGATAGAAACGGATAACATAGAGGGTAAGTTTA--CAA------CGT----------------------TACTCCAAATGAAATGA--CCCAGCTTAATG-T------------TTTCATGGCTTGCT--GTTTCAGAGCGCCTCAGTCAGCTGGATGGCAATGCCAGTGCTATGGCC---------------------------
droRho1 scf7180000758667:22222-22412 + T----------------------------CTGCAAGTTC-----------CGGAA--GCG---------------------------------------------------------GTGTGGCTGGGGATACCT------TGGTATCCTCAGCGGAGG---------------------------------------------------------------------------------------AGCTGCCAAAGATAGAAACAGATAATATAGAGGGTAAGTCTA--CAG------TGT----------------------TACGTCAAATGAAATGC--CTCATTTCAATG-T------------TTTCTTGGATTACT--TTTTCAGAGCGCCTCAGTCAGCTGGATGGCAATGCCAGTGCTAT-------------------------------
droBia1 scf7180000302136:1220735-1220920 + T----------------------------CTGCCAGTTC-----------CGGCA--GCA---------------------------------------------------------GTTTGCCAGGTGATACACCGCCGGTAGCCTCAGCAGAGGAGG---------------------------------------------------------------------------------------AGCTGCCAAAGATAGAAACAGATAATATAGAAGGTAGGTCAA--TGG------AGT----------------------TACTCCAAATGAAATGT--CTCTATTCAATG-T------------CTACTTGCCTTACT--GTTTCAGAGCGTCTCAGCCAGCTGGATGGCAAT------------------------------------------
droTak1 scf7180000415170:107191-107371 - C---------------------ACCAGTTCAGCGGGTTC-----------CGGAG--GCG---------------------------------------------------------T------------------------AACCACTTCGGCGGAGG---------------------------------------------------------------------------------------AGCTGCCAAAGATAGAAACAGATAATATAGAGGGTAGGTCCA--A---------AT----------------------TACTTTGAATTATATGTATCTCTCTTCAATG-T------------TTTCCTGGCTTACTATTTTTTAGAGCGCCTCAGTCAGCTGGATGGCAATGCCAGTGCGAT-------------------------------
droEug1 scf7180000409797:1917422-1917618 - T---------------------ACCAGCTCTGCAAGTTC-----------TGGGA--GCG---------------------------------------------------------GTTTACCGGGAGATACAC------CGATATCTTCAGCGGAGG---------------------------------------------------------------------------------------A---GACTAAGATAGAAACAGATAACATAGAGGGTAGGTCTA--TGG------GGT----------------------TATTCAAAATGAAACGT--CTATATTAAATG-T-------TACTTTGTTTTGGCTTACT--GTTTTAGAGCGTCTCAGCCAACTGGATGGCAATGCCAGTGT----------------------------------
dm3 chr3R:11621210-11621401 + GGC------------AGTGGCCACAAGTTCAACGAGTGC-----------TGGCA--GCG---------------------------------------------------------CTCTA------------T------CCTTATCTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGACCAAGATAGAAATAGATAATATAGAAGGTGGGTCTA--AGG------AAT----------------------CACTCCAAATAAATAGT--CTTGACTCAAAA-T------------TTCTCTCGCCCACT--GTTTCAGAGCGTCTCAGCCAGCTAGATGGGAATGCCACTGG----------------------------------
droSim2 3r:9624901-9625095 - GGC------------AGTGGCCACAAGTTCAGCGAGTGC-----------TGGCA--GCG---------------------------------------------------------CTTTA------------T------CCTTAACTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGTCCAAGATAGAAATAGATAATATAGAAGGTGGGTCTA--AGG------AAT----------------------CACTCCAAATAAATAGT--CTTGACTCAAAA-T------------TTTCCTCGCCCACT--TTTTTAGAGCGTCTCAGCCAGCTAGATGGGAATGCCACTGGAAT-------------------------------
droSec2 scaffold_0:10332832-10333022 - C---------------------ACAAGTTCAGGGAGTGC-----------TGGCA--GCG---------------------------------------------------------CTTTA------------T------CCTTAAGTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGTCCAAGATAGAAATAGATAATATAGAAGGTGGGTCTA--AGG------AAT----------------------CACTCCAAATAAATAGT--CTTGACTCAAAA-T------------TTTCCTCGCCCACT--TTTTTAGAGCGTCTCAGCCAGCTAGATGGGAATGCCACTGGAATGCCT--------------------------G
droYak3 3R:14816347-14816547 - GGC------------AGTGGCCACAGGTTCTGCGAGTTC-----------TGGCA--GCG---------------------------------------------------------GTTTA------------C------CCTTATCATCGGTGGACG---------------------------------------------------------------------------------------AGCTGCCTAAGATAGAAACAGATAATATAGAAGGTAGGTCTA--AGG------ACT----------------------CACTTCAAATTAATAGT--CTAAACTCAAAAAT------------TTTCCTTGCCTACT--GTTTCAGAGCGTCTCAGCCAGCTAGATGGGAATGCCACTGGAATGCCA--------------------------G
droEre2 scaffold_4770:11143371-11143582 + TACATCGGTACTGGCAGTGGCCACATGTTCTGCGAGCTC-----------TGGTA--GCG---------------------------------------------------------GATTA------------C------CCTTATCTTCAGTGGACG---------------------------------------------------------------------------------------AGCTGCCTAAGATAGAAACAGATAATATAGAAGGTTGGTCCA--AGG------AAT----------------------CACTCCAAATGAATAGT--CTTAACTCAAAA-T------------TTCCTTTGCCTACT--ATTTCAGAGCGTCTCAGCCAGCTAGATGGGAATGCCACTGGAATGCCC--------------------------G

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TGTATCAGAAGT---------------------------TGAAGCAG---AGG--TAG--TAGTCGCAG--------------G-------------------------------------------------------------------------GGAATCCACAACGGGTGAGCCACAAATCGATCTGCTTGAGCCGATGGAATTGGAGCTACCAGCGACGACGACGTCGGCGCCATTAGAGGAGTTGCCAAAGATCGAAACGGATGACATAGAGGGTAAGTTAG--AGA------AC------GGAAAGACGAGAGAGAGCACTTTCCATTCATACT--CT-CTTCT--AC-T------------CCATCTCTTCGATT--TTCACAGAGCGCCTCAGCCAGTTGGATGGCAATGCTAGTGCCATTTTGCC------------------TGCAGTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........AGT---------------------------TGAAGCAG---AGG--TAG--TAG.............................................................................................................................................................................................................................................................................................................................................................................................................2015.0050000000050
.............................................................................................................................................................................................................................................................AAAGATCGAAACGGATGACATA.........................................................................................................................................................................................2213.0030000000030
....................................................G--TAG--TAGTCGCAG--------------G-------------------------------------------------------------------------GGAATC.........................................................................................................................................................................................................................................................................................................2012.0020000000020
............................................................................................................................................................................................................................................................CAAAGATCGAAACGGATGAC............................................................................................................................................................................................2011.0010000000010
.....................................................................................................................................................................................................................................GTCGGCGCCATTAGAGGAGTTG.................................................................................................................................................................................................................2211.0010100000000
.......................................................TAG--TAGTCGCAG--------------G-------------------------------------------------------------------------GGAATCC........................................................................................................................................................................................................................................................................................................2011.0010000000010
...........T---------------------------TGAAGCAG---AGG--TAG--TAG.............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000010
.......................................................................................................................................................................................................GATGGAATTGGAGCTACCA..................................................................................................................................................................................................................................................1911.0010010000000
........................................GAAGCAG---AGG--TAG--TAGTCGCAG--------------G-------------------------------------------------------------------------GGA............................................................................................................................................................................................................................................................................................................2611.0010100000000
.....CAGAAGT---------------------------TGAAGCAG---AGG--TAG--................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
................................................................................................................................................................................CCACAAATCGATCTGCTTGAG.......................................................................................................................................................................................................................................................................2111.0010000000010
.......................................................................................................................................................................................................................................................GTTGCCAAAGATCGAAACGGA................................................................................................................................................................................................2111.0010100000000
.................................................................................................................................................................TCCACAACGGGTGAGCCACAAATC...................................................................................................................................................................................................................................................................................2411.0010100000000
..................................................................................................................................................................................ACAAATCGATCTGCTTGAGC......................................................................................................................................................................................................................................................................2011.0010000010000
........................................GAAGCAG---AGG--TAG--TAGTCG..........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000001000
.......GAAGT---------------------------TGAAGCAG---AGG--TAG--TA..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
..................................................................................................................................................................................................................................................................TCGAAACGGATGACATAGAGG.....................................................................................................................................................................................2111.0010000000010
.............................................................................................................................................................................................................................................................................................................................................................................................TT--TTCACAGAGCGCCTCAGCC........................................................2111.0010100000000
.......................................TGAAGCAG---AGG--TAG--TAGTCG..........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
........................................................................................................................................................................................................ATGGAATTGGAGCTACCAGC................................................................................................................................................................................................................................................2011.0010000000010
.........AGT---------------------------TGAAGCAG---AGG--TAG--TAGA............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000010
....................................................................................................................................................................................................................................CGTCGGCGCCATTAGAGGAG....................................................................................................................................................................................................................2011.0010000001000
.............................................................AGTCGCAG--------------G-------------------------------------------------------------------------GGAATCCACA.....................................................................................................................................................................................................................................................................................................1911.0010000001000
...................................................................................................................................................................................................................................ACGTCGGCGCCATTAGAGG......................................................................................................................................................................................................................1911.0010000001000
.............................................................................................................................................................................................................................................................AAAGATCGAAACGGATGACAT..........................................................................................................................................................................................2111.0010000000010
..........GT---------------------------TGAAGCAG---AGG--TAG--TAG.............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000010
.............................................AG---AGG--TAG--TAGTCGCAG--------------G-------------------------------------------------------------------------...............................................................................................................................................................................................................................................................................................................1811.0010000001000
.................................................................................................................................................................................CACAAATCGATCTGCTTGAG.......................................................................................................................................................................................................................................................................2011.0010100000000
....TCAGAAGT---------------------------TGAAGCAG---AGG--TA...................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
....TCAGAAGT---------------------------TGAAGCAG---AGG--.....................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000010
.....................................................................................................................................................................................................................................GTCGGCGCCATTAGAGGA.....................................................................................................................................................................................................................1811.0010000100000
.............................................AG---AGG--TAG--TAGTCGCAG--------------G-------------------------------------------------------------------------G..............................................................................................................................................................................................................................................................................................................1911.0010000001000
...................................................................................................................................................................CACAACGGGTGAGCCACAAATCGA.................................................................................................................................................................................................................................................................................2411.0010100000000
..................................................................................................................................................................................................GAGCCGATGGAATTGGAGC.......................................................................................................................................................................................................................................................1911.0010000001000
droPer2
TGTAGCAGAAGT---------------------------TGAAGCAG---AGG--TAG--TAGTCGTAG--------------G-------------------------------------------------------------------------GGAATCCACAACGGGTGAGCCACAAATCGATCTGCTTGAGCCGATGGAATTGGAGCAACCAGCGACGACGACGTCGGCGCCATTAGAGGAGTTGCCAAAGATCGCAACGGATGATATAGAGGGTAAGTTAG--AGA------AC------GGAAAGACGACAGAGAGCACTTTCCATTCATACT--CT-CTTCT--AC-T------------CCATCTCTTCGATT--TTCACAGAGCGCCTCAGCCAGTTGGATGGCAATGCTAGTGCCATTTTGCC------------------TGCAGTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................TTGGAGCAACCAGCGACGACGACG......................................................................................................................................................................................................................................2414.004040000
..............................................................................................................................................................................................................TTGGAGCAACCAGCGACGACGAC.......................................................................................................................................................................................................................................2313.003300000
.................................................................................................................................................................................CACAAATCGATCTGCTTGAGC......................................................................................................................................................................................................................................................................2113.003300000
....................................................G--TAG--TAGTCGTAG--------------G-------------------------------------------------------------------------GGAATCC........................................................................................................................................................................................................................................................................................................2112.002000002
.................................................................................................................................................................................CACAAATCGATCTGCTTGA........................................................................................................................................................................................................................................................................1912.002200000
..............................................G---AGG--TAG--TAGTCGTAG--------------G-------------------------------------------------------------------------GGA............................................................................................................................................................................................................................................................................................................2011.001000001
.........................................................................................................................................................................................................................................................TGCCAAAGATCGCAACGGATGAT............................................................................................................................................................................................2311.001100000
..............................................G---AGG--TAG--TAGTCGTAG--------------G-------------------------------------------------------------------------GGAA...........................................................................................................................................................................................................................................................................................................2111.001000001
....................................................G--TAG--TAGTCGTAG--------------G-------------------------------------------------------------------------GGAAT..........................................................................................................................................................................................................................................................................................................1911.001000001
....GCAGAAGT---------------------------TGAAGCAG---AGG--.....................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.....................................................................................................................................................................................................................AACCAGCGACGACGACGTCGGCGCCA.............................................................................................................................................................................................................................2611.001010000
.GTAGCAGAAGT---------------------------TGAAGCAG---AGG--T....................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
......................................................................................................................................................................................................................................................................AACGGATGATATAGAGGAGC..................................................................................................................................................................................20120.081100000
droWil2
AACATCCGATGC---------------------------TGTGGCAG---ATG--TCG--TCGTCTCAACATCGTCGGGATCTGGGATTACACCGCCCATGTTGGGATTGTCCACAAGTATATCAGATGTTTCAACGCCGCCGCAATCATTTGAGGAGA---------------------------------------------------------------------------------------AGCTGCTAAAGCAAGA---TGATAGTTTCGAAAGTATGTTTT--TGTTTTTGTAGACATATTGAAATACCTGAG---------------TATT-C--TCTGATATAAAA-T------------TGTTTATCTTTTAT--ATGACAGAACGCCTTAGCCTCTTGGATGGGAGTTCTTCTGCCG--------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......CGATGC---------------------------TGTGGCAG---ATG--T....................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGGATGGGAGTTCTTCTG...................................2111.00100100
.......GATGC---------------------------TGTGGCAG---ATG--TCG--T...............................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................GCCTTAGCCTCTTGGATGGGAGTTCTT......................................2711.00100010
............................................................................................CCGCCCATGTTGGGATTGTCCACA........................................................................................................................................................................................................................................................................................................................................................2411.00110000
.............................................................CGTCTCAACATCGTCGGGATCTGGGA.....................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
.......................................................................................................................................................TGAGGAGA---------------------------------------------------------------------------------------AGCTGCTAAAGCAAGA---T..................................................................................................................................................................................................2511.00100100
.............................................AG---ATG--TCG--TCGTCTCAACAT....................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................ACGCCTTAGCCTCTTGGATGGGA............................................2311.00100010
droVir3
TTC------------CCTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCACAGAACGCCTTAGTCAACTGGATGGCAACCCGAGCGTTGTGTTGCCGCCCATTGTGGATATAAGCGCGGCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................AACCCGAGCGTTGTGTTGC..........................1912.002000000002000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TGGCAACCCGAGCGTTGT...............................1812.002000000001000000000000000000000001000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TGGCAACCCGAGCGTTGTGTTGC..........................2311.001000001000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GCAACCCGAGCGTTGTGTTGCC.........................2211.001000000000000000000000000000000000000010000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................AACTGGATGGCAACCCGAGC....................................2011.001000000000000010000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................AACCCGAGCGTTGTGTTGCCGCC......................2311.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TAGTCAACTGGATGGCAACC.........................................2011.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
AGCAACAGCAGC---------------------------AGGAGCAA---CAG--AAA--CAGCAGCAG--------------G-------------------------------------------------------------------------GGCTATAACTGCAGGA--GCAGCAAATACAAGAGCAACGGCAGCAGGAGAAGCAGCAA-CAGCAGCAACACCATCAACCTCATCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGG----------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AACATCAGCAGC---------------------------AGCAGCAG---CAG--CAG--CAACAACAG--------------G-------------------------------------------------------------------------AGC--------------------------------------------------------------------------------------AGCAACAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................G---CAG--CAG--CAACAACAG--------------G-------------------------------------------------------------------------AGC--------------------------------------------------------------------------------------A.....................................................................................................................................................................................................................2140.25101
.........................................................G--CAACAACAG--------------G-------------------------------------------------------------------------AGC--------------------------------------------------------------------------------------AGCAACA...............................................................................................................................................................................................................2150.20101
.....CAGCAGC---------------------------AGCAGCAG---CAG--CAG--CAACA...........................................................................................................................................................................................................................................................................................................................................................................................................26200.05110
droAna3
GCC---------------------C-------AAAG-TCCGCCGTAGAAGTGGCA--GTG-----GCCG--------------G---------------------------CC----AGTTA------------C------TGATCCCCGCCACGGAGG---------------------------------------------------------------------------------------AGCTGCCAAAGATAGAAACCGATAACTTGGAGGGTAAGTGCGACTAG------CGA----------------------CATTTCTAACTTACC-T--CCCGTTTCAACGAT------------TTCCATCGCCTGCTTGTTTTCAGAACGCCTTAGTCAGCTGGATGGCAACGCCAGTGGGATTCCC--------------------------GSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................CC----AGTTA------------C------TGATCCCCGCCAC..................................................................................................................................................................................................................................................................................................................2111.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................CCTTAGTCAGCTGGATGGCA............................................2011.001100000
.........................................CCGTAGAAGTGGCA--GTG-----GC.........................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
GCC---------------------C-------AAAG-TCCGCCGTAGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
................................................................................................................................................TCCCCGCCACGGAGG---------------------------------------------------------------------------------------AGCTGCC...............................................................................................................................................................................................................2211.001010000
..........................................CGTAGAAGTGGCA--GTG-----GCC........................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..............................................GAAGTGGCA--GTG-----GCCG--------------G---------------------------CC----AGTT...................................................................................................................................................................................................................................................................................................................................................2311.001000001
droBip1
TCG----------------------------GAGGAGTCCGGAGGAGGAGTGGCA--GTG-----GCTG--------------G---------------------------CC----AGCTA------------C------TGATCCCTGCCGTGGAGG---------------------------------------------------------------------------------------AGCTGCCAAAGATAGAAACCGATAACTTGGAGGGTGAGTGGC--TAG------CGA----------------------CATTTCCAACTTACA-T--GCCGTTTCAATGAT------------TTTCATGGCCTGCTTGTTTTCAGAACGCCTTAGTCAGTTGGATGGCAACGCCAGTGGGATT------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TCGACC----------------ACCGAATCCCCAGGTGTCAGCGGAG---AGGCA--GCA--GCTGAGG--------------A----------------------------------TCAG------------T------CAATTCCAGCCGAGGAGG---------------------------------------------------------------------------------------AGCTGTCCAAGATCGAAACAGATAATATAGAGGGTAAGTGTA--AAT-----------------------------------------------T--TTTAACTGAAAA-CCAAAAGCTTACCTGTTTTGGCATACT--TTTTTAGAGCGCCTCAGTCAGCTGGATGGCAATGTTATTGCCATGTCA---------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GGC------------AGTGGCCACCGGATCTACAAGTTC-----------CGGAA--GCG---------------------------------------------------------CGTTGATAGGGGAAGTCC------CGATGTCTGCAGCGGATG---------------------------------------------------------------------------------------AACTGCAAAAGATGGAAACAGATAATATAGAGGGTAAGTCCA--AAC------GGT----------------------TACTCGAAATGAGACGC--GTCAATTCAATG-T------------TTTCTTGGCTTACT--ATTTTAGAGCGTCTCAGCCAGCTGGATGGAAATGCCAGTGTTATGCTG---------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
C---------------------ACCAGTTCTGCGAATTC-----------CGGAA--GCG---------------------------------------------------------GTTTGTCAGGAGATACCT------CCGTATCCTCAGCGGTGG---------------------------------------------------------------------------------------AGCTGCCAAAGATAGAAACGGATAACATAGAGGGTAAGTTTA--CAA------CGT----------------------TACTCCAAATGAAATGA--CCCAGCTTAATG-T------------TTTCATGGCTTGCT--GTTTCAGAGCGCCTCAGTCAGCTGGATGGCAATGCCAGTGCTATGGCC---------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
T----------------------------CTGCAAGTTC-----------CGGAA--GCG---------------------------------------------------------GTGTGGCTGGGGATACCT------TGGTATCCTCAGCGGAGG---------------------------------------------------------------------------------------AGCTGCCAAAGATAGAAACAGATAATATAGAGGGTAAGTCTA--CAG------TGT----------------------TACGTCAAATGAAATGC--CTCATTTCAATG-T------------TTTCTTGGATTACT--TTTTCAGAGCGCCTCAGTCAGCTGGATGGCAATGCCAGTGCTAT-------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
T----------------------------CTGCCAGTTC-----------CGGCA--GCA---------------------------------------------------------GTTTGCCAGGTGATACACCGCCGGTAGCCTCAGCAGAGGAGG---------------------------------------------------------------------------------------AGCTGCCAAAGATAGAAACAGATAATATAGAAGGTAGGTCAA--TGG------AGT----------------------TACTCCAAATGAAATGT--CTCTATTCAATG-T------------CTACTTGCCTTACT--GTTTCAGAGCGTCTCAGCCAGCTGGATGGCAAT------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
C---------------------ACCAGTTCAGCGGGTTC-----------CGGAG--GCG---------------------------------------------------------T------------------------AACCACTTCGGCGGAGG---------------------------------------------------------------------------------------AGCTGCCAAAGATAGAAACAGATAATATAGAGGGTAGGTCCA--A---------AT----------------------TACTTTGAATTATATGTATCTCTCTTCAATG-T------------TTTCCTGGCTTACTATTTTTTAGAGCGCCTCAGTCAGCTGGATGGCAATGCCAGTGCGAT-------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
T---------------------ACCAGCTCTGCAAGTTC-----------TGGGA--GCG---------------------------------------------------------GTTTACCGGGAGATACAC------CGATATCTTCAGCGGAGG---------------------------------------------------------------------------------------A---GACTAAGATAGAAACAGATAACATAGAGGGTAGGTCTA--TGG------GGT----------------------TATTCAAAATGAAACGT--CTATATTAAATG-T-------TACTTTGTTTTGGCTTACT--GTTTTAGAGCGTCTCAGCCAACTGGATGGCAATGCCAGTGT----------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GGC------------AGTGGCCACAAGTTCAACGAGTGC-----------TGGCA--GCG---------------------------------------------------------CTCTA------------T------CCTTATCTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGACCAAGATAGAAATAGATAATATAGAAGGTGGGTCTA--AGG------AAT----------------------CACTCCAAATAAATAGT--CTTGACTCAAAA-T------------TTCTCTCGCCCACT--GTTTCAGAGCGTCTCAGCCAGCTAGATGGGAATGCCACTGG----------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................AGTGGATG---------------------------------------------------------------------------------------AGGTGACCAAGAT.........................................................................................................................................................................................................21111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000200000
..........................................................................................................................................................GGATG---------------------------------------------------------------------------------------AGGTGACCAAGATAGAA.....................................................................................................................................................................................................22110.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TATCTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGACC..............................................................................................................................................................................................................2318.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CAAGTTCAACGAGTGC-----------TGGCA--GC.................................................................................................................................................................................................................................................................................................................................................................................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................GATG---------------------------------------------------------------------------------------AGGTGACCAAGATAGAAATAGA................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AGGTGACCAAGATAGAAATAGATAATAT..........................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TCTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGACCAAGATA........................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
....................................................................................................................................................................................................................................................................................................................................................................T------------TTCTCTCGCCCACT--GTTTCAG....................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................CTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGACC..............................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000
.....................................................................................................................................................GCAGTGGATG---------------------------------------------------------------------------------------AGGTGACCAAG...........................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000200000
........................................................................................................................................................GTGGATG---------------------------------------------------------------------------------------AGGTGACCAAGATAGAA.....................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAGCTAGATGGGAATGC........................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................T------------TTCTCTCGCCCACT--GTTTC......................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................AGAGCGTCTCAGCCAGCTAGATGGGAAT..........................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TTATCTGCAGTGGATG---------------------------------------------------------------------------------------AGGTG.................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000
................................................................................................................................................TATCTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGA................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGCTAGATGGGAATGCCA......................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000
....................................................................................................................................................TGCAGTGGATG---------------------------------------------------------------------------------------AGGTGACC..............................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GTTCAACGAGTGC-----------TGGCA--GCG---------------------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............AGTGGCCACAAGTTCAACGAGTGC-----------T.........................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000
....................................................................................................................................................................................................................................................................................................................................................................T------------TTCTCTCGCCCACT--GTTTCAA....................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TCTA--AGG------AAT----------------------CACTCCAAATAAATAG........................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................A------------T------CCTTATCTGCAGTGGATG---------------------------------------------------------------------------------------A.....................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................GGATG---------------------------------------------------------------------------------------AGGTGACCAAGATA........................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................T------------TTCTCTCGCCCACT--GTTTCAGT...................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGCTAGATGGGAATGCC.......................................2012.0020000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TTATCTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGTA...............................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................TG---------------------------------------------------------------------------------------AGGTGACCAAGATAGAAAT...................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................CAGTGGATG---------------------------------------------------------------------------------------AGGTGACCAAGATAGA......................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................CCAAGATAGAAATAGATAATATAGATT.....................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CCACAAGTTCAACGAGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CGTCTCAGCCAGCTAGATGGGA............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................GAGCGTCTCAGCCAGCTAGATGGGAA...........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TTATCTGCAGTGGATG---------------------------------------------------------------------------------------AGG...................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................AGTTCAACGAGTGC-----------TGGCA--G..................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TATCTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGAC...............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................TAGT--CTTGACTCAAAA-T------------TTCTCTCGC..................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CTCAGCCAGCTAGATGGGAAT..........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................A-T------------TTCTCTCGCCCACT--GTTT.......................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................GACTCAAAA-T------------TTCTCTCGCCC................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TATCTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGACCAAGA..........................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TGCAGTGGATG---------------------------------------------------------------------------------------AGGTGACCA.............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................TTATCTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGACCAAGA..........................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GCTAGATGGGAATGCCACT....................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCTAGATGGGAATGCCACT....................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTAGATGGGAATGCCACTGG----------------------------------2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................CTCTA------------T------CCTTATCTGCAGTGG................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAGCTAGATGGGAATG.........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................AGATAGAAATAGATAATATAGAAGAGC..................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................GATG---------------------------------------------------------------------------------------AGGTGACCAAGATAGAAATAGAT...............................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................CTCAAAA-T------------TTCTCTCGCCCACT--GTTT.......................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGAGCGTCTCAGCCAGC.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TA--AGG------AAT----------------------CACTCCAAATAAATAG........................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTCAGAGCGTCTCAGCCAGCT....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................ATG---------------------------------------------------------------------------------------AGGTGACCAAGATAGA......................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................GC-----------TGGCA--GCG---------------------------------------------------------CTCTA------------T------CCTTAT.........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................GATG---------------------------------------------------------------------------------------AGGTGACCAAGATA........................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................G---------------------------------------------------------------------------------------AGGTGACCAAGATAGAA.....................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CAGCCAGCTAGATGGGAATGCC.......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................CA--GCG---------------------------------------------------------CTCTA------------T------CCTTATCTGC.....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................TA------------T------CCTTATCTGCAGTGGATG---------------------------------------------------------------------------------------......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................CTTATCTGCAGTGGATG---------------------------------------------------------------------------------------AGGT..................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CTCAGCCAGCTAGATGGGAATG.........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.........................................................GCG---------------------------------------------------------CTCTA------------T------CCTTATCTGC.....................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTCAGAGCGTCTCAGCCAGCTAGATGG..............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................................................................................................................................................................................................................................................GTGGGTCTA--AGG------AAT----------------------CACTCCAAAT..............................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
...................GCCACAAGTTCAACGAGTGC-----------..........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................ACAAGTTCAACGAGTGC-----------TGGCA--...................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................TGCAGTGGATG---------------------------------------------------------------------------------------AGGTGACCAA............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................CACAAGTTCAACGAGTGC-----------T.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AACGAGTGC-----------TGGCA--GCG---------------------------------------------------------CTCTA------------T------CCTTAT.........................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AAGTTCAACGAGTGC-----------TGGCA--GCT---------------------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................AGT--CTTGACTCAAAA-T------------TTCTCTCGCC.................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTAGATGGGAATGCCA......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................AA-T------------TTCTCTCGCCCACT--GTTTCAG....................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GC-----------TGGCA--GCG---------------------------------------------------------CTCTA------------T------CC.............................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGTTCAACGAGTGC-----------TGGCA--GCG---------------------------------------------------------CT.....................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................................................................................................................................................................................................................................................................................................................................................................T------------TTCTCTCGCCCACT--GTTTCAGA...................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................ATAATATAGAAGGTGGGTCTA--..........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................T------------TTCTCTCGCCCACT--GTTTCA.....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................TGGATG---------------------------------------------------------------------------------------AGGTGACCAAGATAGAAATA..................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TCTA--AGG------AAT----------------------CACTCCAAATAA............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................AGTGGATG---------------------------------------------------------------------------------------AGGTGACCAAGATAG.......................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TGC-----------TGGCA--GCG---------------------------------------------------------CTCTA------------T------CCTTATCTGC.....................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................AGCTAGATGGGAATGCCAC.....................................1911.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TGC-----------TGGCA--GCG---------------------------------------------------------CTCTA------------T------CCTTATCT.......................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CAGCCAGCTAGATGGGAATGC........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................ATCTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGACCAAGAT.........................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TCAGCCAGCTAGATGGGAATGCCACT....................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TCAGCCAGCTAGATGGGAATGC........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................CAAGTTCAACGAGTGC-----------TGGCA--GCG---------------------------------------------------------CTC....................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................CAACGAGTGC-----------TGGCA--GCG---------------------------------------------------------C......................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TTCTCTCGCCCACT--GTTTCAG....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................ACCAAGATAGAAATAGATAATATAGAA......................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CAAGTTCAACGAGTGC-----------TGGCA--...................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................GTGACCAAGATAGAAATAGATAATA...........................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................CTTATCTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGACCAAG...........................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................CTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGACCAAGA..........................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................CA--GCG---------------------------------------------------------CTCTA------------T------CCTTATCTGCA....................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................ATCTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGA................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TATCTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGACCAA............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
droSim2
GGC------------AGTGGCCACAAGTTCAGCGAGTGC-----------TGGCA--GCG---------------------------------------------------------CTTTA------------T------CCTTAACTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGTCCAAGATAGAAATAGATAATATAGAAGGTGGGTCTA--AGG------AAT----------------------CACTCCAAATAAATAGT--CTTGACTCAAAA-T------------TTTCCTCGCCCACT--TTTTTAGAGCGTCTCAGCCAGCTAGATGGGAATGCCACTGGAAT-------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................CTTAACTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGTCC..............................................................................................................................................................................................................2511.00100000000000100000
...................................................................................................................................................................................................................................................................................................................................................GT--CTTGACTCAAAA-T------------TTTCCTCGCC.................................................................................2511.00100100000000000000
................................................................................................................................................TAACTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGT................................................................................................................................................................................................................2111.00100000000001000000
...........................................................................................................................................................................................................................................................TCCAAGATAGAAATAGATAATATAGA.......................................................................................................................................................................................2611.00100000001000000000
.........................................................................................................................................................................................................................................................................AGATAATATAGAAGA....................................................................................................................................................................................15200.05100000010000000000
droSec2
C---------------------ACAAGTTCAGGGAGTGC-----------TGGCA--GCG---------------------------------------------------------CTTTA------------T------CCTTAAGTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGTCCAAGATAGAAATAGATAATATAGAAGGTGGGTCTA--AGG------AAT----------------------CACTCCAAATAAATAGT--CTTGACTCAAAA-T------------TTTCCTCGCCCACT--TTTTTAGAGCGTCTCAGCCAGCTAGATGGGAATGCCACTGGAATGCCT--------------------------GSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................AGTGCAGTGGATG---------------------------------------------------------------------------------------AGGTGTCCAAG...........................................................................................................................................................................................................2411.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................CTCAGCCAGCTAGATGGGAATGC........................................2311.0011000
.........................................................................................................................................................................................................................................................TGTCCAAGATAGAAATAGAT...............................................................................................................................................................................................2011.0010100
........................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCTCAGCCAGCTAGATGGGA............................................2411.0010010
.............................................................................................................................................CCTTAAGTGCAGTGGATG---------------------------------------------------------------------------------------AGGT..................................................................................................................................................................................................................2211.0010010
...........................................................................................................................................................................................................................................................................ATAATATAGAAGGTGGGTCTA--..........................................................................................................................................................................2111.0010001
droYak3
GGC------------AGTGGCCACAGGTTCTGCGAGTTC-----------TGGCA--GCG---------------------------------------------------------GTTTA------------C------CCTTATCATCGGTGGACG---------------------------------------------------------------------------------------AGCTGCCTAAGATAGAAACAGATAATATAGAAGGTAGGTCTA--AGG------ACT----------------------CACTTCAAATTAATAGT--CTAAACTCAAAAAT------------TTTCCTTGCCTACT--GTTTCAGAGCGTCTCAGCCAGCTAGATGGGAATGCCACTGGAATGCCA--------------------------GSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................TTTA------------C------CCTTATCATCGGTGGACG---------------------------------------------------------------------------------------AGCT..................................................................................................................................................................................................................2711.00100000010000
.......................................................................................................................TTA------------C------CCTTATCATCGGTGGACG---------------------------------------------------------------------------------------AGCTGC................................................................................................................................................................................................................2811.00101000000000
.........................GGTTCTGCGAGTTC-----------TGGCA--GCG---------------------------------------------------------G......................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................AGCTAGATGGGAATGCCACTGGAATGCC............................2811.00100100000000
...............AGTGGCCACAGGTTCTGCGAGTTC-----------TGGC......................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
.............................CTGCGAGTTC-----------TGGCA--GCG---------------------------------------------------------GT.....................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
droEre2
TACATCGGTACTGGCAGTGGCCACATGTTCTGCGAGCTC-----------TGGTA--GCG---------------------------------------------------------GATTA------------C------CCTTATCTTCAGTGGACG---------------------------------------------------------------------------------------AGCTGCCTAAGATAGAAACAGATAATATAGAAGGTTGGTCCA--AGG------AAT----------------------CACTCCAAATGAATAGT--CTTAACTCAAAA-T------------TTCCTTTGCCTACT--ATTTCAGAGCGTCTCAGCCAGCTAGATGGGAATGCCACTGGAATGCCC--------------------------GSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................CTCAGCCAGCTAGATGGGAATGCCA......................................2512.0020001100
...........................................................................................................................................................................................................................................................................................................AAT----------------------CACTCCAAATGAATAGT--C....................................................................................................................2111.0010000100
..................................AGCTC-----------TGGTA--GCG---------------------------------------------------------GATTA------------C------CC.............................................................................................................................................................................................................................................................................................................................2111.0011000000
................................................................................................................................................................................................................................................................GATAGAAACAGATAATATAGAAGAGC..................................................................................................................................................................................2620.5010000100

Generated: 05/17/2015 at 11:06 PM