ID:

dps_674

Coordinate:

2:20333018-20333168 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [Dpse\GA27368:1]; five_prime_UTR [Dpse\GA27368-u5]; intron [Dpse\GA27368-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------###########---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GTAAATTCGATCCGCGTTCACACTGATTCCAATCCAAATGAACTCTTACGGTTTGTAGAAATTAAAAACTTAATTTAAACTGCTTTACCACAAGAAATCACCAACACAAAAGGAGCGACAGCCATACCGCCAGTGCCCCATAGACGAGTTGATATTTTTGAGTGCCCGCCCTGTGTTCGGTTCGCTTTTATTTCACAATTTCAGTTTTCTTTTGTTTGCCCTCCTCGTTTGCCATCATACATTTTTTTGTG
**************************************************....(((((((((((....)))))))...))))...........................((((((((..(((..((...(((.((..(((...((((........)))).)))...)).))).))..)))))))))))............**************************************************
Read size # Mismatch Hit Count Total Norm Total M040
female body
SRR902011
testis
GSM343916
embryo
..............................AATCCAAATGAACTCTTACG......................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0
...........................................TCTTACGGTTTGTAGAAATTAAAAAC...................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0
.............................................TTACGGGTTGTGGAAATTA........................................................................................................................................................................................... 19 2 4 0.25 1 0 0 1
.......................................................................................................................................................................GCACTGTGTTCGGTACGC.................................................................. 18 2 4 0.25 1 1 0 0

Anti-sense strand reads

CATTTAAGCTAGGCGCAAGTGTGACTAAGGTTAGGTTTACTTGAGAATGCCAAACATCTTTAATTTTTGAATTAAATTTGACGAAATGGTGTTCTTTAGTGGTTGTGTTTTCCTCGCTGTCGGTATGGCGGTCACGGGGTATCTGCTCAACTATAAAAACTCACGGGCGGGACACAAGCCAAGCGAAAATAAAGTGTTAAAGTCAAAAGAAAACAAACGGGAGGAGCAAACGGTAGTATGTAAAAAAACAC
**************************************************....(((((((((((....)))))))...))))...........................((((((((..(((..((...(((.((..(((...((((........)))).)))...)).))).))..)))))))))))............**************************************************
Read size # Mismatch Hit Count Total Norm Total GSM444067
head
M040
female body
V112
male body
.........TAGTGGCAAGTGTGACTAGGGT............................................................................................................................................................................................................................ 22 3 2 0.50 1 1 0 0
..................................................................................................................................................................ACTGTCGGGACAAAAGCCAAG.................................................................... 21 3 3 0.33 1 0 0 1
.................................................................................CGACATGGTGTACTTTAATG...................................................................................................................................................... 20 3 7 0.29 2 0 2 0
.........TAGTCGAAAGTGTGACTAGGGT............................................................................................................................................................................................................................ 22 3 4 0.25 1 1 0 0
.........TAGGCGCGAGTGTTACTAGGGT............................................................................................................................................................................................................................ 22 3 8 0.13 1 1 0 0
......................................................................................................................................................................................................................................AGGTAGTATGTAAGAAAA... 18 2 12 0.08 1 0 1 0
..................................................................................................................................................................................................TGTTAAAGTTAAAGGCAAACAA................................... 22 3 20 0.05 1 0 0 1
........................................................................................................................................................................................................AGTCAAAAGCAAAAAAACG................................ 19 2 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:20332968-20333218 + dps_674 GTAAATTCGATCCGCGTTCACACTGATTCCAA--TCCAAATGAACTCTTACGGTTTGTAGA---AATTAAAAACTTAAT------------------TTAA----A----CTGCTTT---ACCACAA----GA-------AATCAC-CAACACA--AAAGGAGCGACAGCCATACCGCCAGTGCCCCATAGACGAGTTGATAT---TTTTGAGTGCCCGCCCTGTGTTCGGTTCGCTTTT--------ATTTCACAATTTCAGTTTTCTTTTGTTTGCCC--------------------------T------CC------------------------TCGTTTGCCA-------------------------------------------TCATACATTTTTTT---------------------------------------GTG
droPer2 scaffold_3:3084628-3084878 + GTAAATTTGATTCGCGTTCACACTGATTCCAA--TCCAAATGAACTCTTACGGTTTGTAGA---AATTAAAAACTTAAT------------------TTAA----A----CTGCTTT---ACCACAA----GA-------ATTCAC-CAACACA--AAAGGAGCGACAGCCATACCGCCAGTGCCCCATAGACGAGTTGATAT---TTTTGAGTGCCCGCCCTGTGTTCGGTTCGCTTTT--------ATTTCACAATTTCTGTTTTCTTTTGTTTGCCC--------------------------T------CC------------------------TCGTTTGCCA-------------------------------------------TCATACATTTTTTT---------------------------------------GTG
droWil2 scf2_1100000004902:966398-966662 - -----------------------------TCTAAATGAAATGAGTTCATACGGTTTGTAGTTAAAAA---ATTATGAATCTTTAAACATAATAAACCTTAAACAATTGCAATGCTTAAATGCCACAAACAAAGA--CAACAATCAC-CAACACA--AAAGGAGCGACTGCC---------GTTTCTAGAATT----------------------GCTG-TTTTA-----ATTTAGC-TTT------GTCG-CCGCTCCCACTGC------CTCCCCACCCACATC--------GCC--CCTGTT------CTTCATCATGCC--------TATGGCGCCGCGATTGCCA------------------------------------------CTCATACATTT-GTT---GTAATAT-----TTTT--------------------GTA
droVir3 scaffold_13047:6391968-6392207 + -----------------------------TCACGCTGTCATGAACACATACGGTTTGTAGCTGAAAATAACAATAAATT------------------TTAATTAAT----TTGCTT----ACCACAAA-ACGAA------TATCACCCAACATAATTAAGCAGCGACAGAG---------------AGTTTCATAGTTGAATTACGTTTTAAGTGC----------------------------------TACTC-AATTCCGTTTGTGTTTGTATGCGCTTTTTCCTTTTTTTATA-------------------TATATTTATACCCATCCGACACACACACACACACGCAAACA----------------------------------------------GAC---A---CAC-----AA--------------------ATGAG
droMoj3 scaffold_6540:1686392-1686627 - ---------------------------------------ATGAACACTTACGGTTTGTAGTTGAAAATAACAATTATTT------------------TTAGTTAAT----TTGCTT----ACCACAAA-ACGAATATT--AC-TACCCAACATAATAAGGGAGCGACAGAG---------------AATTTTATGATCGATTT-------------------------------GCGTTTATAAGT--GCTGTTC-AATTTCATTCTATTTTGTATGCGCTTTGT--------TATAGATCCTTTTTAGCCT-----------------ACCTCACGCACACACACACACACAAACG------------------------------AATCTGTGTACATTT-----------------G-T---------------------ATGTG
droGri2 scaffold_14906:11706465-11706742 + -----------------------------TCACGCTGACATGAACACTTACGGTTTGTAGCTGAAAATAACAATTAAAT------------------TTAATTAAT----TTGCTT----ACCACAAC-AAGAA------TATCACCCAACAAAATAAAGGAGCGACATAA---------------AGATTCATAGTTGATTTACGTT-------------TTA-----AGTGCCGTTCT--------GTTCCGTTTTTTGTGT------TTGTATGCGCTTTTT--------GAT--ATCCTT------TTCAATTATCTC--------TCTCACGCACACACAGCCACTGACACAGACACAGACACAAACACGCAGCTAGCAGCGAGT-TGTATACATTTTTAT----------T--------------------------ATGTG
droAna3 scaffold_13340:13287226-13287449 - ------------------------------AA--TCCAAATGAACTCCTACGGTTTGTAGACCA-ATTGAATATTGTAT------------------TTAG---------CCGCTTT----CCACAA----GA-------AATCAC-CAACACA--AAAGGAGCGACAGCC-TGCCACCTGCGCTCGAGAAAGT-GTGGAACA---CTTTTCGAGCTC-CTCTG-----ATTTCGC-TTT--------GTTGCG-AATTT-----------------------------------------CTTTTTAGTTTCCG------------------------CCAT-------------------------------------TGTCGCGCGC-CCCATACATTTTGTTGTTGTTGTATCC-G-CTCAGT--------------------G
droBip1 scf7180000396691:2158309-2158532 - ------------------------------AA--TCCAAATGAACTCCTACGGTTTGTAGACAA-ATTGAATATTGTAT------------------TTAG---------CCGCTTT----CCACAA----AA-------AATCAC-CAACACA--AGAGGAGCGACAGCC-TGCCACAAGCGCCCGAAAACGT-GTGGAGCA---CTTTTCGAGCTC-CTCTG-----ACTTCGC-TTT--------GTTGCG-AATTT-----------------------------------------CTTTTTAGTTTCCG------------------------CCAT-------------------------------------TGCCGCGCGC-CCCATACATTTTGTTGTTGTTGTATCC-G-CTCAGT--------------------G
droKik1 scf7180000302634:149741-149951 + --------------------------------------AATGAACTCCTACGGTTTGTAGACAGAATTAAAACTTGAAT------------------TTAA---------CTGCTTT---CCCACAA----GA-------AATCAC-CAACACA--AAAGGAGCGACAGCC-TGCCGCCATTGCCCCGCCGCCC-GTCGATCA---TTTTACGAGCC-----------------GCTTTT--------TGTTCGCTATTTTCGTT------------------------CTTTGGCC--C------CCCCTTCA---------------------------ATT------------------------------------CGCCGCGCGT-CCCATACATTTTGTTCTTG---CATTT------T--------------------GCA
droFic1 scf7180000453903:61987-62218 + -------------------------------A--TCCAAATGAACTCCTACGGTTTGTAGACAGAATTAAAAATTGAAT------------------TAGA---------CCGCTTT---CCCACAA----GA-------AATCAC-CCACACA--AAAGGAGCGACAACC-TGCCGCCCGCGCCCAGATCCCTGGTCGTCTA---TTTTCCGTGCC----CTG-----AGTTTGATTTC--------GATCTA-AACTTTCGTTGT-------------TTCGT--------TATT---------CTGCCTCTG------------------------TCATT------------------------------------TGCCGCGCGT-CCCATACATTTTGTTATTG---CATTA-G-C-GAGT--------------------G
droEle1 scf7180000491104:2210544-2210793 + -----------------------------CAA--TCCAAATGAACTCCTACGGTTTGTAGACAGAATTAAAACCTGAAT------------------TAAA---------CTGCTTT---CCCACAA----TA-------AATCAC-CAACACA--AAAGGAGCGACAGCC-AACCGCCCGCGCATAGCAATCTGCTCGACTA---TTTTTCGTGTC----CTG-----AGTTTGCCTTT--------AATCCGTTAT-TTCGTT------------------------GTTTTCTT---------CTGTCTCAG------------------------TCATT------------------------------------TGCCGCGCGT-CCCATATATTTTGTTGTTG---CATCAGGGC-CAGTGCATATTATTAT---TATTAC
droRho1 scf7180000777453:15505-15755 + -----------------------------CAA--TCCAAATGAACTCCTACGGTTTGTAGACAGAATTAAAACCTGAAT------------------TTAA---------CTGCTTT---CCCACAA----GA-------AATCAC-AAACACA--AAAGGAGCGACAGCC-TACCGCCCGCGCCCAGCCATCTGGTCGACCA---TTTTTCGTGCC----CTG-----AGTTTACCTTT--------GATCCG-TATTTTCGTT------------------------GTTTTCTT---------CTGCCTCAG------------------------TCATT------------------------------------TGCCGCGCGT-CCCATACATTTTGTTGTTG---CTTTA-G-C-CAGTGCATATTATTATTATTATTAT
droBia1 scf7180000302411:182766-182981 + -----------------------------CAA--TCCAAATGAACTCCTACGGTTTGTAGACAGAAATAAAACCTGAAT------------------AAAA---------CTGCTTT---TTCACAA----GA-------AATCAC-CAACACA--AGAGAAGCGACAGCC-CCCCGCCCGAGCCCAGAAACTTGGTTGACTT---CTTTC----------CTT-----GGTTT----TT--------TACACG-AAGTTTTGTT------------------------ATTTGCCC---------CTGCCTCAG------------------------TCATT------------------------------------GGCCGCGCGT-CCCATACATATTGTT---G---CAT-A-G-C--AGT--------------------G
droTak1 scf7180000415789:885241-885477 + -----------------------------CAA--TCCAAATGAACTCCTACGGTTTGTAGACAGAATAAAAACCTGAAT------------------TTAA---------CTGCTTT---TCCACAA----GA-------AATCAC-AAACACA--GAAGAAGCGACAGCC-CACCGCCCGTGCCCAGAAACCTGGTCGACTT---TTTTTCGAGCC----CAG-----AGTTTTGCTTT--------GACCAG-AACTTTCGTT------------------------CTTTGCCC---------CTGCCTCAG------------------------TCAT-------------------------------------TGCCGCGCGT-CCCATTCATTTTGTTGTTG---CCTTG-G-C--AGTGCATATTA------------T
droEug1 scf7180000409759:403522-403759 + -----------------------------CAA--TCCAAATGAACTCCTACGGTTTGTAGACAGAATTAAAACCTGAAT------------------ATAA---------CTGCTTT---CCCACAA----GA-------AACCAC-AAACACA--AAAGGAGCGACAGCC--ACCAACCGTGCCTAAAAAAGTGGCCGACCA---TTTTTCGAGCC----CTA-----AGTTTGCATTT--------GACCCG-ATTATTTGTT------------------------ATTTTCTG---------CTGCCTCAA------------------------TCAT-------------------------------------TGCCGCGCGC-CCCATACATTTTGTTGTTG---CTTTA-G-C--AGTACATAT----------ATTAG
dm3 chr3R:467710-467923 + -----------------------------CAA--TCCAAATGAACTCCTACGGTTTGTAGACAATATTAAAAACTGAAT------------------TTAA---------CTGCCTT---CCCACAA----GA-------AATCAC-CAACACA--AAGGGAGCGACAACC-CACCGCCTGCGCCCAGAAACCTGGTCGACTG---TTTTC----------CCG-----AGTTTTCTTTT--------GGCCCACAACCTGCGTTTGCTCT-G--TG-----------------------------------CAG------------------------TCAC-------------------------------------TGCCGCG-----CCATACATTTTATT---T---CATTA-G-CGAAGC--------------------C
droSim2 3r:416080-416282 + dsi_9231 -----------------------------CAA--TCCAAATGAACTCCTACGGTTTGTAGACAATATTAAAAACTGAAT------------------TTAA---------CTGCCTT---CCCACAA----GA-------AATCAC-CAACACA--AAGGGAGCGACAACC-CACCGCCTGCGCCCAGAAACCTGGTCGACTG---TTTTC----------CCC-----AGTTTTCTTTT--------GACCCGCAACCTGCGTTTGCTCT-G--TG-----------------------------------CA----------------------------------G-------------------------------------------CCATACATTTTATT---T---CATTA-G-CAAAGC--------------------G
droSec2 scaffold_6:581772-581984 + -----------------------------CAA--TCCAAATGAACTCCTACGGTTTGTAGACAATATTAAAAACTGAAT------------------TTAA---------CTGCCTT---CCCACAA----GA-------ACTCAC-CAACACA--AAGGGAGCGACAACC-CACCGCCTGCGCCCAGAAACCTGGTCGACTG---TTTTC----------CCC-----AGTTTTCTTTT--------GACCCACAACCTGCGTTTGCTTT-G--TG-----------------------------------CA----------------------------------G-------------------------------------------CCATACATTTTATT---T---CATTA-G-CAAAGCGAATATTT----------TTA
droYak3 3R:767435-767645 + -----------------------------CAA--TCCAAATGAGCTCCTACGGTTTGTAAACAATATTAAAAACTGAAT------------------TTAA---------CTGCCTT---CCCATAA----GA-------AATACC-AAACACA---AGGGAGCGACAACC-CACCGCCTGCGCCCAGAAAACTGGCCGAATG---TTTTT----------CCG-----ATTTATCTTTT--------AGCCCACAACTTGCGTTTTCCCT-G--TG-----------------------------------CAG------------------------TCAA-------------------------------------CGCCGCG-----CCATACATTTTATT---T---TAATA-G-C--AGC--------------------G
droEre2 scaffold_4770:774358-774569 + -----------------------------CAA--TCCAAATGAACTCCTACGGTTTGTAGACAATATTAAAAACTGTAT------------------TTAA---------CTGCCTT---CCCACAA----GA-------AATCAC-CAACACA--AAGGGAGCGACAACC-CAACGCCTGCGCCCAGAAAACTGGCCGTCTG---TTTTT----------CCG-----AGTTTTCTTTT--------AACCCAGAACTTGCGTTTTCTCT-G--TG-----------------------------------CAG------------------------TCCC-------------------------------------TGCCGCG-----CCATACAATTTATT---T---CATTA-G-C--AGC--------------------G

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GTAAATTCGATCCGCGTTCACACTGATTCCAA--TCCAAATGAACTCTTACGGTTTGTAGA---AATTAAAAACTTAAT------------------TTAA----A----CTGCTTT---ACCACAA----GA-------AATCAC-CAACACA--AAAGGAGCGACAGCCATACCGCCAGTGCCCCATAGACGAGTTGATAT---TTTTGAGTGCCCGCCCTGTGTTCGGTTCGCTTTT--------ATTTCACAATTTCAGTTTTCTTTTGTTTGCCC--------------------------T------CC------------------------TCGTTTGCCA-------------------------------------------TCATACATTTTTTT---------------------------------------GTGSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
..............................AA--TCCAAATGAACTCTTACG............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.............................................TCTTACGGTTTGTAGA---AATTAAAAAC......................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000010
droPer2
GTAAATTTGATTCGCGTTCACACTGATTCCAA--TCCAAATGAACTCTTACGGTTTGTAGA---AATTAAAAACTTAAT------------------TTAA----A----CTGCTTT---ACCACAA----GA-------ATTCAC-CAACACA--AAAGGAGCGACAGCCATACCGCCAGTGCCCCATAGACGAGTTGATAT---TTTTGAGTGCCCGCCCTGTGTTCGGTTCGCTTTT--------ATTTCACAATTTCTGTTTTCTTTTGTTTGCCC--------------------------T------CC------------------------TCGTTTGCCA-------------------------------------------TCATACATTTTTTT---------------------------------------GTGSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
............................................................................................................................................ATTCAC-CAACACA--AAAGGAGC............................................................................................................................................................................................................................................................................................2111.001001000
droWil2
-----------------------------TCTAAATGAAATGAGTTCATACGGTTTGTAGTTAAAAA---ATTATGAATCTTTAAACATAATAAACCTTAAACAATTGCAATGCTTAAATGCCACAAACAAAGA--CAACAATCAC-CAACACA--AAAGGAGCGACTGCC---------GTTTCTAGAATT----------------------GCTG-TTTTA-----ATTTAGC-TTT------GTCG-CCGCTCCCACTGC------CTCCCCACCCACATC--------GCC--CCTGTT------CTTCATCATGCC--------TATGGCGCCGCGATTGCCA------------------------------------------CTCATACATTT-GTT---GTAATAT-----TTTT--------------------GTASizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
No Reads
droVir3
-----------------------------TCACGCTGTCATGAACACATACGGTTTGTAGCTGAAAATAACAATAAATT------------------TTAATTAAT----TTGCTT----ACCACAAA-ACGAA------TATCACCCAACATAATTAAGCAGCGACAGAG---------------AGTTTCATAGTTGAATTACGTTTTAAGTGC----------------------------------TACTC-AATTCCGTTTGTGTTTGTATGCGCTTTTTCCTTTTTTTATA-------------------TATATTTATACCCATCCGACACACACACACACACGCAAACA----------------------------------------------GAC---A---CAC-----AA--------------------ATGAGSizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
................................................................................................................................................................................................................TTAAGTGC----------------------------------TACTC-AATTCCGTT.......................................................................................................................................................................................2214.004000000000000000000000000000000000000000000000000000000000000004
.........................................................................................................................................................................................................................................................................TGTGTTTGTATGCGCTTTTTCCTTT..............................................................................................................................................................2511.001000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................CATAATTAAGCAGCGACAGAG---------------AG....................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
............................................................................ATT------------------TTAATTAAT----TTGCTT----ACC.....................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................TAATTAAGCAGCGACAGAG---------------AGTTTCA...............................................................................................................................................................................................................................................................2611.001000000000000100000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TACCCATCCGACACACACACA.......................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................CACACACACACACACGCAAA.............................................................................................20200.051000000100000000000000000000000000000000000000000000000000000000
droMoj3
---------------------------------------ATGAACACTTACGGTTTGTAGTTGAAAATAACAATTATTT------------------TTAGTTAAT----TTGCTT----ACCACAAA-ACGAATATT--AC-TACCCAACATAATAAGGGAGCGACAGAG---------------AATTTTATGATCGATTT-------------------------------GCGTTTATAAGT--GCTGTTC-AATTTCATTCTATTTTGTATGCGCTTTGT--------TATAGATCCTTTTTAGCCT-----------------ACCTCACGCACACACACACACACAAACG------------------------------AATCTGTGTACATTT-----------------G-T---------------------ATGTGSizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
......................................................................................................................................................................................................................................................................................................................CT-----------------ACCTCACGCACACACA.......................................................................................................1811.001000010
droGri2
-----------------------------TCACGCTGACATGAACACTTACGGTTTGTAGCTGAAAATAACAATTAAAT------------------TTAATTAAT----TTGCTT----ACCACAAC-AAGAA------TATCACCCAACAAAATAAAGGAGCGACATAA---------------AGATTCATAGTTGATTTACGTT-------------TTA-----AGTGCCGTTCT--------GTTCCGTTTTTTGTGT------TTGTATGCGCTTTTT--------GAT--ATCCTT------TTCAATTATCTC--------TCTCACGCACACACAGCCACTGACACAGACACAGACACAAACACGCAGCTAGCAGCGAGT-TGTATACATTTTTAT----------T--------------------------ATGTGSizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
...............................ACGCTGACATGAACACTTA..............................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
droAna3
------------------------------AA--TCCAAATGAACTCCTACGGTTTGTAGACCA-ATTGAATATTGTAT------------------TTAG---------CCGCTTT----CCACAA----GA-------AATCAC-CAACACA--AAAGGAGCGACAGCC-TGCCACCTGCGCTCGAGAAAGT-GTGGAACA---CTTTTCGAGCTC-CTCTG-----ATTTCGC-TTT--------GTTGCG-AATTT-----------------------------------------CTTTTTAGTTTCCG------------------------CCAT-------------------------------------TGTCGCGCGC-CCCATACATTTTGTTGTTGTTGTATCC-G-CTCAGT--------------------GSizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
.......................................ATGAACTCCTACGGTTTGTAGACC.................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..............................AA--TCCAAATGAACTCCTACGG...........................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
................................................................................................................................................................................ACCTGCGCTCGAGAAAGT-GTG..........................................................................................................................................................................................................................................................2111.001000010
..................................................................................................TAG---------CCGCTTT----CCACAA----GA-------AATCAC-CAA..........................................................................................................................................................................................................................................................................................................2711.001100000
.........................................................................................................................................................................................................................C-CTCTG-----ATTTCGC-TTT--------GT......................................................................................................................................................................................................1811.001001000
droBip1
------------------------------AA--TCCAAATGAACTCCTACGGTTTGTAGACAA-ATTGAATATTGTAT------------------TTAG---------CCGCTTT----CCACAA----AA-------AATCAC-CAACACA--AGAGGAGCGACAGCC-TGCCACAAGCGCCCGAAAACGT-GTGGAGCA---CTTTTCGAGCTC-CTCTG-----ACTTCGC-TTT--------GTTGCG-AATTT-----------------------------------------CTTTTTAGTTTCCG------------------------CCAT-------------------------------------TGCCGCGCGC-CCCATACATTTTGTTGTTGTTGTATCC-G-CTCAGT--------------------GSizeHit CountTotal NormTotal
No Reads
droKik1
--------------------------------------AATGAACTCCTACGGTTTGTAGACAGAATTAAAACTTGAAT------------------TTAA---------CTGCTTT---CCCACAA----GA-------AATCAC-CAACACA--AAAGGAGCGACAGCC-TGCCGCCATTGCCCCGCCGCCC-GTCGATCA---TTTTACGAGCC-----------------GCTTTT--------TGTTCGCTATTTTCGTT------------------------CTTTGGCC--C------CCCCTTCA---------------------------ATT------------------------------------CGCCGCGCGT-CCCATACATTTTGTTCTTG---CATTT------T--------------------GCASizeHit CountTotal NormTotal
No Reads
droFic1
-------------------------------A--TCCAAATGAACTCCTACGGTTTGTAGACAGAATTAAAAATTGAAT------------------TAGA---------CCGCTTT---CCCACAA----GA-------AATCAC-CCACACA--AAAGGAGCGACAACC-TGCCGCCCGCGCCCAGATCCCTGGTCGTCTA---TTTTCCGTGCC----CTG-----AGTTTGATTTC--------GATCTA-AACTTTCGTTGT-------------TTCGT--------TATT---------CTGCCTCTG------------------------TCATT------------------------------------TGCCGCGCGT-CCCATACATTTTGTTATTG---CATTA-G-C-GAGT--------------------GSizeHit CountTotal NormTotal
No Reads
droEle1
-----------------------------CAA--TCCAAATGAACTCCTACGGTTTGTAGACAGAATTAAAACCTGAAT------------------TAAA---------CTGCTTT---CCCACAA----TA-------AATCAC-CAACACA--AAAGGAGCGACAGCC-AACCGCCCGCGCATAGCAATCTGCTCGACTA---TTTTTCGTGTC----CTG-----AGTTTGCCTTT--------AATCCGTTAT-TTCGTT------------------------GTTTTCTT---------CTGTCTCAG------------------------TCATT------------------------------------TGCCGCGCGT-CCCATATATTTTGTTGTTG---CATCAGGGC-CAGTGCATATTATTAT---TATTACSizeHit CountTotal NormTotal
No Reads
droRho1
-----------------------------CAA--TCCAAATGAACTCCTACGGTTTGTAGACAGAATTAAAACCTGAAT------------------TTAA---------CTGCTTT---CCCACAA----GA-------AATCAC-AAACACA--AAAGGAGCGACAGCC-TACCGCCCGCGCCCAGCCATCTGGTCGACCA---TTTTTCGTGCC----CTG-----AGTTTACCTTT--------GATCCG-TATTTTCGTT------------------------GTTTTCTT---------CTGCCTCAG------------------------TCATT------------------------------------TGCCGCGCGT-CCCATACATTTTGTTGTTG---CTTTA-G-C-CAGTGCATATTATTATTATTATTATSizeHit CountTotal NormTotal
No Reads
droBia1
-----------------------------CAA--TCCAAATGAACTCCTACGGTTTGTAGACAGAAATAAAACCTGAAT------------------AAAA---------CTGCTTT---TTCACAA----GA-------AATCAC-CAACACA--AGAGAAGCGACAGCC-CCCCGCCCGAGCCCAGAAACTTGGTTGACTT---CTTTC----------CTT-----GGTTT----TT--------TACACG-AAGTTTTGTT------------------------ATTTGCCC---------CTGCCTCAG------------------------TCATT------------------------------------GGCCGCGCGT-CCCATACATATTGTT---G---CAT-A-G-C--AGT--------------------GSizeHit CountTotal NormTotal
No Reads
droTak1
-----------------------------CAA--TCCAAATGAACTCCTACGGTTTGTAGACAGAATAAAAACCTGAAT------------------TTAA---------CTGCTTT---TCCACAA----GA-------AATCAC-AAACACA--GAAGAAGCGACAGCC-CACCGCCCGTGCCCAGAAACCTGGTCGACTT---TTTTTCGAGCC----CAG-----AGTTTTGCTTT--------GACCAG-AACTTTCGTT------------------------CTTTGCCC---------CTGCCTCAG------------------------TCAT-------------------------------------TGCCGCGCGT-CCCATTCATTTTGTTGTTG---CCTTG-G-C--AGTGCATATTA------------TSizeHit CountTotal NormTotal
No Reads
droEug1
-----------------------------CAA--TCCAAATGAACTCCTACGGTTTGTAGACAGAATTAAAACCTGAAT------------------ATAA---------CTGCTTT---CCCACAA----GA-------AACCAC-AAACACA--AAAGGAGCGACAGCC--ACCAACCGTGCCTAAAAAAGTGGCCGACCA---TTTTTCGAGCC----CTA-----AGTTTGCATTT--------GACCCG-ATTATTTGTT------------------------ATTTTCTG---------CTGCCTCAA------------------------TCAT-------------------------------------TGCCGCGCGC-CCCATACATTTTGTTGTTG---CTTTA-G-C--AGTACATAT----------ATTAGSizeHit CountTotal NormTotal
No Reads
dm3
-----------------------------CAA--TCCAAATGAACTCCTACGGTTTGTAGACAATATTAAAAACTGAAT------------------TTAA---------CTGCCTT---CCCACAA----GA-------AATCAC-CAACACA--AAGGGAGCGACAACC-CACCGCCTGCGCCCAGAAACCTGGTCGACTG---TTTTC----------CCG-----AGTTTTCTTTT--------GGCCCACAACCTGCGTTTGCTCT-G--TG-----------------------------------CAG------------------------TCAC-------------------------------------TGCCGCG-----CCATACATTTTATT---T---CATTA-G-CGAAGC--------------------CSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
....................................................................................................................................................AACACA--AAGGGAGCGACAACC-....................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000200000000000000001000
................................................TACGGTTTGTAGACAATATTAAAAACT.....................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................CAC-CAACACA--AAGGGAGCGACAA.......................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................GGTTTGTAGACAATATTAAAAACT.....................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................TCT-G--TG-----------------------------------CAG------------------------TCAC-------------------------------------TGCCGCG-----CC......................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................A-------AATCAC-CAACACA--AAGGGAGC............................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................A--AAGGGAGCGACAACC-CACCGCCTGCG.........................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TTTGCTCT-G--TG-----------------------------------CAG------------------------TCAC-------------------------------------TGC.................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................CACAACCTGCGTTTGCTCT-G--TG-----------------------------------CAG------------------------T............................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TGCGTTTGCTCT-G--TG-----------------------------------CAG------------------------TCAC-------------------------------------TGCCGC..............................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AAATGAACTCCTACGGTT.........................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..............................................................................T------------------TTAA---------CTGCCTT---CCCACAA----GA-------AATCAC-C............................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................A--AAGGGAGCGACAACC-CACCGC..............................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ATGAACTCCTACGGTTTGTAGAC..................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CGCCCAGAAACCTGGTCGACTG---TTTTC----------CC.................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................ACACA--AAGGGAGCGACAACC-CACCG...............................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................................................................................CA--AAGGGAGCGACAACC-CACC................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................ACACA--AAGGGAGCGACAACC-....................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................AGACAATATTAAAAACTGA...................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................CCTGGTCGACTG---TTTTC----------CCG-----AGTTT......................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TGCTCT-G--TG-----------------------------------CAG------------------------TCAC-------------------------------------TGCCG...............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TGCCGCG-----CCATACATTTTATT---.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................GGAGCGACAACC-CACCGCCTGCGCCC......................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................TCCTACGGTTTGTAGACAATATTAAAA........................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................AGAAACCTGGTCGACTG---T.................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................AACACA--AAGGGAGCGACAACC-C...................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TGCGTTTGCTCT-G--TG-----------------------------------CAG------------------------TCAC-------------------------------------TG..................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................C-CAACACA--AAGGGAGCGACAACC-CACC................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................AT------------------TTAA---------CTGCCTT---CCCACAA----G............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................G---TTTTC----------CCG-----AGTTTTCTTTT--------GGCCCA..................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TTGCTCT-G--TG-----------------------------------CAG------------------------TCAC-------------------------------------TG..................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................................................................................TTAA---------CTGCCTT---CCCACAA----G............................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................CAGAAACCTGGTCGACTG---TTTTC----------CC.................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CCACAACCTGCGTTTGCTCT-G--.............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................CAA----GA-------AATCAC-CAACACA--AAGGGAGC............................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................CA--AAGGGAGCGACAACC-CACCGCC.............................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................TACGGTTTGTAGACAATA..............................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
..................................TCCAAATGAACTCCTACGG...........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................CAACACA--AAGGGAGCGAC.........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................AGGGAGCGACAACC-CACCGCCTG...........................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TCCTACGGTTTGTAGACAATATTAAAAAC......................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TCAC-CAACACA--AAGGGAGCGAC.........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AAATGAACTCCTACGGTTTG.......................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TGCTCT-G--TG-----------------------------------CAG------------------------TCAC-------------------------------------TGCCGCG-----C.......................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CTCCTACGGTTTGTAGACAA................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................G--TG-----------------------------------CAG------------------------TCAC-------------------------------------TGCCGCG-----CC......................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................ATATTAAAAACTGAAT------------------TTAA---------..................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CCAAATGAACTCCTACGGTT.........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................CTGCGCCCAGAAACCTGGTCGAC.......................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TGCGTTTGCTCT-G--TG-----------------------------------CAG------------------------TCAC-------------------------------------TGCCG...............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................TT--------GGCCCACAACCTGCGTTTGC....................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................AC-CAACACA--AAGGGAGCGACAACC-CACC................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TCCTACGGTTTGTAGACAATATTAAA.........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ATGAACTCCTACGGTTTG.......................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................CCCACAACCTGCGTTTGCTC..................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TC----------CCG-----AGTTTTCTTTT--------GGATA...................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
-----------------------------CAA--TCCAAATGAACTCCTACGGTTTGTAGACAATATTAAAAACTGAAT------------------TTAA---------CTGCCTT---CCCACAA----GA-------AATCAC-CAACACA--AAGGGAGCGACAACC-CACCGCCTGCGCCCAGAAACCTGGTCGACTG---TTTTC----------CCC-----AGTTTTCTTTT--------GACCCGCAACCTGCGTTTGCTCT-G--TG-----------------------------------CA----------------------------------G-------------------------------------------CCATACATTTTATT---T---CATTA-G-CAAAGC--------------------GSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
................................................TACGGTTTGTAGACAATATTAAAAAC......................................................................................................................................................................................................................................................................................................................................................................................2615.00500000013000001000
...............................................................................................................................................................................................................TTTC----------CCC-----AGTTTTCTTTT--------GAC.....................................................................................................................................................................................................2112.00200000000020000000
..................................TCCAAATGAACTCCTACGGTTTG.......................................................................................................................................................................................................................................................................................................................................................................................................2312.00220000000000000000
..................................TCCAAATGAACTCCTACGGTT.........................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
...............................................................................................................................................................................................................TTTC----------CCC-----AGTTTTCTTTT--------GA......................................................................................................................................................................................................2011.00100001000000000000
........................................................................................................................................................................ACC-CACCGCCTGCGCCCAGAAACCTGG............................................................................................................................................................................................................................................................2711.00100000001000000000
.............................................................................................................................AA----GA-------AATCAC-CAACACA--AA..................................................................................................................................................................................................................................................................................................1911.00100001000000000000
..........................................................AGACAATATTAAAAACTG....................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
......................................................TTGTAGACAATATTAAAAACTGAAT------------------...............................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
.........................................................................................................................................................................................................................................................................TGCTCT-G--TG-----------------------------------CA----------------------------------G-------------------------------------------CCATACATTTTATT---.......................................2611.00100000000000010000
.....................................................TTTGTAGACAATATTAAAAACT.....................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
....................................CAAATGAACTCCTACGGTTTGT......................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
................................................TACGGTTTGTAGACAATATTAAAAA.......................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................ACATTTTATT---T---CATTA-G-CA.........................1911.00100001000000000000
droSec2
-----------------------------CAA--TCCAAATGAACTCCTACGGTTTGTAGACAATATTAAAAACTGAAT------------------TTAA---------CTGCCTT---CCCACAA----GA-------ACTCAC-CAACACA--AAGGGAGCGACAACC-CACCGCCTGCGCCCAGAAACCTGGTCGACTG---TTTTC----------CCC-----AGTTTTCTTTT--------GACCCACAACCTGCGTTTGCTTT-G--TG-----------------------------------CA----------------------------------G-------------------------------------------CCATACATTTTATT---T---CATTA-G-CAAAGCGAATATTT----------TTASizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
....................................................................................................................................................................................GCGCCCAGAAACCTGGTCGACTG---TTTT..............................................................................................................................................................................................................................................2711.0011000
droYak3
-----------------------------CAA--TCCAAATGAGCTCCTACGGTTTGTAAACAATATTAAAAACTGAAT------------------TTAA---------CTGCCTT---CCCATAA----GA-------AATACC-AAACACA---AGGGAGCGACAACC-CACCGCCTGCGCCCAGAAAACTGGCCGAATG---TTTTT----------CCG-----ATTTATCTTTT--------AGCCCACAACTTGCGTTTTCCCT-G--TG-----------------------------------CAG------------------------TCAA-------------------------------------CGCCGCG-----CCATACATTTTATT---T---TAATA-G-C--AGC--------------------GSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
..........................................................................TGAAT------------------TTAA---------CTGCCTT---CCCA....................................................................................................................................................................................................................................................................................................................................2020.50100100000000
................................................................................................................................................................................................................................................................ACTTGCGTTTTCCCT-G--TG-----------------------------------C.......................................................................................................................................1920.50100100000000
...........................................GCTCCTACGGTTTGTAAACAATA..............................................................................................................................................................................................................................................................................................................................................................................................2320.50100100000000
...............................A--TCCAAATGAGCTCCTACGGT..........................................................................................................................................................................................................................................................................................................................................................................................................2120.50100000010000
droEre2
-----------------------------CAA--TCCAAATGAACTCCTACGGTTTGTAGACAATATTAAAAACTGTAT------------------TTAA---------CTGCCTT---CCCACAA----GA-------AATCAC-CAACACA--AAGGGAGCGACAACC-CAACGCCTGCGCCCAGAAAACTGGCCGTCTG---TTTTT----------CCG-----AGTTTTCTTTT--------AACCCAGAACTTGCGTTTTCTCT-G--TG-----------------------------------CAG------------------------TCCC-------------------------------------TGCCGCG-----CCATACAATTTATT---T---CATTA-G-C--AGC--------------------GSizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
................................................................................................................................................................................................................................................................ACTTGCGTTTTCTCT-G--TG-----------------------------------........................................................................................................................................1812.0020000020
...............................A--TCCAAATGAACTCCTACGGTTT........................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
........................................................................................................................................................................................................................................................................TTTCTCT-G--TG-----------------------------------CAG------------------------TCCC-------------------------------------T...................................................................1811.0011000000
.................................................................................................................................................................AGCGACAACC-CAACGCCTGC..........................................................................................................................................................................................................................................................................2011.0011000000
.............................................................................................................................................ATCAC-CAACACA--AAGGGAGCGACA........................................................................................................................................................................................................................................................................................2411.0011000000

Generated: 05/17/2015 at 11:00 PM