ID:

dps_636

 Coordinate:

2:18214251-18214401 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.5 -11.8

Flybase annnotation

CDS [Dpse\GA19581-cds]; exon [Dpse\GA19581:4]; intron [Dpse\GA19581-in]

Repeatable elements

NameClassFamilyStrand
Helitron-1N1_DVirRCHelitron+
mature
  1. Unknown_group_7:1467-1487 -
  2. Unknown_group_149:1717-1737 +
  3. dps_636  2:18214337-18214357 +
  4. XL_group1a:5485987-5486007 -
star
  1. Unknown_group_98:13967-13985 +
  2. Unknown_group_286:77-95 -
  3. dps_636  2:18214313-18214331 +
  4. XL_group3a:1576255-1576273 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TCGACGTACGCTTTCGTACTGGTCTGTGCACATCCAAGGATATGACAAGAGTAAGTGCTACTAATCAAAATCAAAATCTTTGTAAACGCGATATTTTTATACCCGATAATCAAAGAGTGGATGTGTGTAACATCCAGAAGGAAGCATTTCCGACCCCATAAAGTATATATATTTTTGATCAGCTTCAAAAGCCGAGTCGATGTAGCCATGTTTGTCTGTCTGTCTGTGTGTCCATCTTATTTGAGACCATA
****************************************************************************************************************....((((((((.....)))))).................))...********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
 SRR902011
testis
 GSM444067
head
 V112
male body
.......ACGCTTTCGTACTGGTCTGTGCAC............................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
.........GCTTTCGTACTGGTCTGTGCAC............................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
.......................................ATATGACAAGAGTAAGTGCTA............................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................CAAAAGCCGAGTCGATGT................................................ 18 0 1 1.00 1 0 1 0 0 0
......TACGCTTTCGTACTGGTCTGTGCACATC......................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................GAAGGAAGCATTTCCGACCCC.............................................................................................. 21 0 4 0.25 1 1 0 0 0 0
.........................................................................................................................................AAGGAAGCATTTCCGACCCCA............................................................................................. 21 0 4 0.25 1 1 0 0 0 0
................................................................................................................AAGAGTGGATGTGTGTAAC........................................................................................................................ 19 0 4 0.25 1 1 0 0 0 0
..........................................................................................................................................AGGAAGCATTTCCGACCCC.............................................................................................. 19 0 6 0.17 1 1 0 0 0 0
...................................................................................................................................................................................................GGGGATGTAGCCATGTTGGT.................................... 20 3 9 0.11 1 0 0 0 1 0
..............................................................................................................................................AGCATTTCCGACCCCATAAATT....................................................................................... 22 1 9 0.11 1 1 0 0 0 0
...................................................................................................................AGTGGATGTGTGTAACATCC.................................................................................................................... 20 0 10 0.10 1 1 0 0 0 0
......................................................................................................................................................CGACCCCATAAAGTATATATATTTT............................................................................ 25 0 10 0.10 1 0 0 1 0 0
...................................................................................................................AGTGGATGTGTGTAACATC..................................................................................................................... 19 0 12 0.08 1 1 0 0 0 0
.....................................................................................................................................CCAGAAGGAAGCATTTCCGA.................................................................................................. 20 0 13 0.08 1 1 0 0 0 0
.................................................................................................................................................................AGTATATATATTTTTGATCAG..................................................................... 21 0 14 0.07 1 0 0 1 0 0
................................................................................................................TAGAGTGGATGTGTGTAA......................................................................................................................... 18 1 19 0.05 1 0 0 0 0 1
.........................................................................................................................TGTGTGTAACATCCATAAGG.............................................................................................................. 20 1 20 0.05 1 0 0 0 1 0

Anti-sense strand reads

AGCTGCATGCGAAAGCATGACCAGACACGTGTAGGTTCCTATACTGTTCTCATTCACGATGATTAGTTTTAGTTTTAGAAACATTTGCGCTATAAAAATATGGGCTATTAGTTTCTCACCTACACACATTGTAGGTCTTCCTTCGTAAAGGCTGGGGTATTTCATATATATAAAAACTAGTCGAAGTTTTCGGCTCAGCTACATCGGTACAAACAGACAGACAGACACACAGGTAGAATAAACTCTGGTAT
**********************************************************************************************....((((((((.....)))))).................))...**************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 GSM343916
embryo
 M059
embryo
.............................................................................................................................................................................................TCGGCTCAGCTACATCGGTAC......................................... 21 0 2 0.50 1 1 0 0 0
.........................................................................................................................................................GGGGTATTTCATATATATAAAAACT......................................................................... 25 0 8 0.38 3 0 3 0 0
................................................................................................................................................GTAAAGGCTGGGGTATTTCATATA................................................................................... 24 0 14 0.36 5 3 0 2 0
..............................................................................................................................................................................................CGGCTCAGCTACATCGGTACA........................................ 21 0 3 0.33 1 1 0 0 0
................................................................................................................................................GTAAAGGCTGGGGTATTTCAT...................................................................................... 21 0 17 0.18 3 3 0 0 0
................................................................................................................................................GTAAAGGCTGGGGTATTTCATATAT.................................................................................. 25 0 14 0.14 2 2 0 0 0
............................................................................................................................CACATTGTAGGTCTTCCTTCG.......................................................................................................... 21 0 10 0.10 1 1 0 0 0
.........................................................................................................................................................................................GTTTTCGGCTCAGCAACTT............................................... 19 2 11 0.09 1 0 0 1 0
................................................................................................................................................GTAAAGGCTGGGGTATTTCATATATA................................................................................. 26 0 14 0.07 1 0 1 0 0
................................................................................................................................................GTAAAGGCTGGGGTATTTCATAT.................................................................................... 23 0 15 0.07 1 1 0 0 0
.................................................................................................................................................TAAAGGCTGGGGTATTTCATATA................................................................................... 23 0 16 0.06 1 1 0 0 0
......................................................................................................................CCTACACACATTGTAGGTCT................................................................................................................. 20 0 17 0.06 1 1 0 0 0
.....................................................................................................................................GGTTTTCCTTCGTATAGGCTG................................................................................................. 21 2 19 0.05 1 1 0 0 0
.....................................................................................................GGTCTAGTAGTTTCCCACC................................................................................................................................... 19 3 20 0.05 1 1 0 0 0
.....................................................................................................................................................................................CGAAGTTTTCGGTCCAGTTA.................................................. 20 3 20 0.05 1 1 0 0 0
........................................................CGCTGAGTAGTTTTAGTTG................................................................................................................................................................................ 19 3 20 0.05 1 1 0 0 0
..........................................................................................................................CACACATTGTAGGTCTTCCTT............................................................................................................ 21 0 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:18214201-18214451 + dps_636 TCGA-C-GTACGCTTT-CG-TACTGGTCT--GTGC-----ACA----------------------------------------------------TC------CAAGGATATGAC-AAGAGTAAGTGCTACTAA------------------TC--------------------------------A----AAATCAAAA---------T----C-T---------------TTGTAAACGCGATATTTTTAT---------------ACCCGATAATCAA-------AGAGT------------------------------GGATGTGTGTAACATCCAGAAGGAAGCATTTCCGACCCCATAAAGTATATATATTTTTGATCAGCTTCAAAAGCCGAGTCGATGTAGCCATGTTTGTCTGTCTGTCTGTG----TGTCCAT--------CT--------T---AT--TTGAGACCATA
droPer2 scaffold_3:570321-570570 + TCGA-C-GTACGCTTT-CG-TACTGGTCT--GTGC-----ACA----------------------------------------------------TC------CAAGGATATGAC-AAGAGTAAGTGCTACTAA------------------TC--------------------------------A----AAATCAAAA---------T----C-T---------------TTGTAAACGCGATATTTTTAT---------------ACCCGATAATCAA-------AGAGT------------------------------GGATGTGTGTAACATCCAGAAGGAAGCATTTCCGACCCCATAAGGTATATATATTTTTGATCAGCTTCAAAAGCCGAGTCGATGTTGCCATGT-TGTCTGTCTGTCTGTG----TGTCCAT--------CT--------T---AT--TTGAGACCATA
droWil2 scf2_1100000004904:28723-28962 - ATGA-T-TTGCACTAT-GT-TACTGAAAA--ACAA-----GCA----------------------------------------------------AT------CGTGGATAGAAG-ATGAAAAA------------------------------------------------------------------------------------ATAATTGCT--CAA-----------------AGC--ATTAATTAT---------------ACTATACACCCAT-------A---------GGTAT--TAAAGTCGCCA-------AAATGTATGTAACAGGCAGAAGGAAGCTTCTCCGACCCCATAAAGTATATATATTTTTGATCAGGATCAACAACCGAGTCGATCTAGCCATGTCTGTCCGTCTGT------------------------ATGAACACGCAG--ATCTCGGAGACTATA
droVir3 scaffold_12736:311862-312113 + GCAA-T-TGTCTTTTT-A----AAAATAT--ACGA-----ATA----------------------------------------------------TT------CTACTATAACAC-AATAATATATACTA---ATGAAAT-------------------TT---------------------------------TCAAGA---------T----C-G---------------GTA-----------------------------------------------------TGAGTATAAGGATATATTGTATTTGTGCAAAATCCAAATGTATATAACAGGCAGAAGAAACCATCTCCGACCCCATAAAGTATATATATTCTTGATCAGCACCAATAGCCGAGTCGATCTAGCCATGTCCGTCTGTCTGTCTGTCCGTCT----GT----CCGTAT---------G--ATCTCAGAACCTATA
droMoj3 scaffold_6498:1830965-1831197 + TGTT-C----------------------T--TTGT-----GCGTC--------------------------------------------------CT-------AAAGATGCATT-GTAAGTAAATGT-------------------------------------------------------------------------------------------------------------------TGCTAATTAT---------------ACCCTGAACCCATTAAAAATGGGAAATCAGGGTATAATAGTTTTGT-T-------AAATGTATGTAACAGGCAGAAGGAGGCGTGGCAGACCCCATAAAGTATATATATTCTTGATCAGGTCGACAAGTTGAGTCGATTTAGCCCTGTCCGTCTGTCCGTATGT--------------------TTAAACGCGTCG--ATCTTAGAGGATATA
droGri2 scaffold_14624:1734128-1734351 - CACA-C-GTACGCATT-TGACACAGA------TAC-----ACA----------------------------------------------------CG------CAC--ATATAAA-GAGA----------------TACAGTGAGCGA-------------------------------------------------------------T----C-GATAAGAGGGAACACATTAT---------------AT---------------AGACAAGAATCGT-------ATAATTA----ATATATAA--GTTGTGG-------CAAATTGTGTAACAG-CAGATGGAAGCATCTACGACCCCATAAAGTATATATATTCTAGAA---------GAGCAGTATCGATTTAGCCATATCCGACTAACTATC----------------------------------------TCAGAGACTATA
droAna3 scaffold_13250:362461-362692 - TCGA-C-GTGCGTTCG-CG-GCCAGT-------TC-----TTA----------------------------------------------------AC------AATGAATA------------------------------------------------------------------TTAAAGA-----------G----AAAAAT------------TAAA--------------------CTCATTTGTAT---------------ACCCT-----TGC-------AG------AGGGTATTTTAATTTTGGTC-------AAAAGTATGGAATGCAGTGAAGAAGACATCTCCGACTCCATAAAGTATATATATTCTTGATCAGGAACACCTGCTGAGTCGATATGAGCATGTCCGTCTGTCTGTCTGTT--------------------TTTACGCAAACTAGC--CTCTTAGCTTT
droBip1 scf7180000395047:37227-37496 + AGGA-C-GCACGCTTC-AA-TTTTAGC-----TAC-----G-----------------------------------------CTGCACGTGTATCA-------CAACTATACGAC-ACATT-------------------------------TCAATATTTATAGGTACAATGAATATTA----------------------------------------TA----------TTTTATTTGTGA-TTTTTTAT---------------ACCCT-----TGC-------AG------AGGGTATTATAATTTTGGTC-------AAAAGTGTGCAATGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCGTCTGTCTGTTTCT------------------------ACGCCAACTAGT--CTCTCAGTTTT
droKik1 scf7180000299730:1283-1533 + TTAA-A-ATCCGATTG-TA-T-CTTG--T--CTGC-----AAA----------------------------------------------------CT------AAATTATATTAC-TCCGGTAA-----ACCAA------------------GC--------------------------------A----AAACGA------------C----A-T---------------TTATTTATTATTTATTTTTAT---------------ACCCT-----TGC---------------AGGGTATTATAATTTCAGTC-------AGAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCAAAAGCCGAGTCGATCTAGCCATGTCCGTCTGTCTGTTTCT------------------------ACGCAAACTAGTCCCTCAGTTTTAA
droFic1 scf7180000453915:6632-6884 + CTCT-T-GTG------------TTTGTTT--GTGG-----TGA----------------------------------------------------TA------CATAGTTAGGGT-GAAAATCGTTGTTTTTCA------------------TC--------------------------------A----GG--CGATT---------T----T-T---------------CTATTAATTTTCCATATTTAT---------------ACCCT-----TGC-------AGAGCAAAAGGGTATTATAATTTCAGTT-------AGAAGTTTGCAACGCAGTGAAGGAGACACCTCAGACCCCATAAAGTATATATATTCTTGATCAACATCACAAGTAGAATCAGAATACGTCTGTTCGTCTGTCCGTCTGTCT----GTTTCT------------C-------------TTCAAACTATA
droEle1 scf7180000491027:29660-29887 + GCT-----------TT-TA-TAATGCTAA--ATGC-----AAA----------------------------------------------------CC------CAAACA--------AATATAAGTTAAAGCTA------------------TT--------------------------------T----AT---------------TAAACTGCC--TTA-------------TA---TTATTATTTTTAT---------------ACCCT-----TGC-------AG------AGGGTATTATAATTTCAGTC-------AGAAGTTTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCACTAGGCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCC----GTCCGT------------------------------------C
droRho1 scf7180000777631:3897-4169 - TTGA-C-ATAGACTTT-TG------------ATGT-----ACA----------------------------------------------------TC------CAGAATTAAAAA-AAGCTTAGGT-CGACTGG------------------GT------------TG---------C--------A----ATATGAAAA---------C----C-T-TATAAGGGTTAAGG--GTTTCTAC--GATATTTAT---------------ACCCTTTACTCGT-------AGAGTAAAATGT--------------------------AATATGTAACAATTAGAAGGAAGCGTTTCCGACCCTATAAAGTATATATATTCTTGTTCAGGATCACTAGCCGATACGATCTAGCCATGTCCGTCTGTCCGTCTGTCTGTGT----GT----CCGTATGAACGCTGAG--ATCTCGGAAACTATA
droBia1 scf7180000301219:11219-11484 - CGAA-C-TAATGGTTC-CG-GGCTTATGTACATGATTTGAGCTTACAAGGATATT-TACCTAATTGTAGTA-------------------------------------------------------------------------------------------------------------TAGATAAAAATAAACAA------------C------A---------------T----------AGTTTATTAT---------------ACCCGTTACTCGT-------AGAGTAAAAGGGTATACTAGAGTCG----------GAAAGTGAGTAACAGATAGAAGGAAGCGTTTCCGACCCCATAAGGCGTATTTATTCTTGATCAGGATCATAAGCCGAATCAATCTAGCCATGTCCGTCTGTCCGT------------------------ATGAACGCTGAG--ATCTCCGAAACTACA
droTak1 scf7180000414948:264-475 + CGTA-C-ATTTTCTT------GCTCCTCG--TTAC-----ACA----------------------------------------------------TC------TTA------------------GT----------------------------------------------------------------------------------------------------------------------GTTTATAAT---------------ATCTT-----T-----------GGTAATAGGGTATATTGTATTCGTGC-------AAAAGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGGGTCACTAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGT--------------------ATGAACGCTGAG--ATCTCAGAAACTACA
droEug1 scf7180000409862:27972-28248 - TGA--G-ATACATTTT-TT-TCCGAG--TGCGAAAATAAAACTAACATAAAAACTGCACGTAATAATAATAATGCACGAAACCTGCCCCCGTAT-----------------------------------------------------------------------------------------------------GAAAA---------C------A---------------GT------ACAAGATTTTTAT---------------ACTCGTTACTCGT-------GGAGTAAATGGGTTAAATAGATTTGTTG-------AAAATTATGTAACAGATAGAAGGAAGCGTTTCCGACCCTATAAAGTATATATATTTTTGATCAAGATCAATAGCGAAGTTTATTGAGCCATGTCCGTCCGTCTGTCCGT--------------------ATGAACGCTGGG--ATCT---------CA
dm3 chrX:22239776-22240028 + CTTT-------------TC-TCATGCACC--ATGT-----GCG----------------------------------------------------TA------CGAGTATAAGCC-GAGT-----------------ACAGCAAGCGACCTACCAAAGATTTTAAGTTCA-----------------------ATTAAA---------AT--------------------------------------------------------------------AGT-------TGGGTAAAGGTGTATACTAGATTCGTTCAA-----AAATGTATGTAAC----AGAAGGAAGCGTTTCCGACCCTATAAATTATATATATTCTTGATCAGGATCAATAGCCGAGTCGATCTACCCATATCCGTCGGCCGGTCTGTCT----GTCCTTCATTCCGTATGAACGTCAAG--ATCT---------CA
droSim2 3l:16444813-16445061 + TCGA-C-ATAGAATAT--GTTAT--A--T--CTGT-----ATA----------------------------------------------------TCCACGACAAAGCATTTGTA-AAAAGT---------------------------------------GGAAGTG---------CGGA-----------TACG----AAACAT------------TATA--------------------CCTAAGTATACATATGTATGTACCATACCCTCTACT---------------------------------CCTTA-------AAAAGTATGTAACAATTGAAAGA---------TGGCCCTATAAAGTAT-TATATTCTCGATCGGGTTCAGTAGCCGAGTCGATCTAGACATATCCGTATGTCCGTCCGTTCGTTT----GT----CCGTATGAACATCAAG--ATCT---------TG
droSec2 scaffold_26:56453-56721 + GCGT-G-GAATATTTT-TG----TGGTTT--GTGG-----GCG----------------------------------------------------TT------AGAGTA-GGCGT-GACAACATTTGAAAACAA------------------AC--------------------------------C----TG--CGCTT-----TGTCAATCAGGC--A--------------------TACTCGTACTTAT---------------ACCCGTTACTCGG-------AGAGTAAAAGGGTATACTACATTCGTTT-------AAAAGTATGTAAAAGGCAGAAGGAAGCGTTTCCGACTATATAGAGTTTATAAATTTTTGACCAGGATTAATAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGT------------------------ATGAACGCCTCG--ATCTCAGGAACTGTA
droYak3 3L:22111003-22111233 - TACT-G-------------------ATGT--GCAC-----AGA-G--------C-----------------------AAA---------------AT------T--TGTTATGACTGACTGTAAGTCACACTTA------------------TT--------------------------------T----AA-----T---------AC-AT-C-C---------------GTTTGAAG---GCATTTTCAT---------------ACCCGTTATTTGA-------AGAA-------------TAGATTCGT-T-------AAAAGTATGTAACAGGCAGAAGGAAGCGTTTTCGAGCATATAAAGTAT--ATATTCTTGATCATGATCAATA-----GTCAATCTGGCCATGTCCGTCTGTCTGTCCGT--------------------ATGAACGTCGA---------AGAACTATA
droEre2 scaffold_4784:2357551-2357829 + TCGAATTGAAAAGCTCACT-GATTGGTAT--TTGAATTAAGC------AAAAGCTAA---------------------------------------------------ACATAAT-AAAATTAAATTGAACACA------------------CC--------------------------------A----AAGTT---G---------T----T-T---------------CATTACAAGCGACATAATAAT---------------ACCCGTTACTCAT-------AGAGTAAAAGGGTATACTAGATTCTTTG-------AAAAGTATGTAACAGTCAGAAGGAATCGTTTCCGACTATATAAAGTATTTATATTCTTGATCACGATCAAGACCCGAGTTGAACTAGCCATGTCCGTCTGTCTGT------------------------ATGAACGCCTCG--ATCTCAGGAACTACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TCGA-C-GTACGCTTT-CG-TACTGGTCT--GTGC-----ACA----------------------------------------------------TC------CAAGGATATGAC-AAGAGTAAGTGCTACTAA------------------TC--------------------------------A----AAATCAAAA---------T----C-T---------------TTGTAAACGCGATATTTTTAT---------------ACCCGATAATCAA-------AGAGT------------------------------GGATGTGTGTAACATCCAGAAGGAAGCATTTCCGACCCCATAAAGTATATATATTTTTGATCAGCTTCAAAAGCCGAGTCGATGTAGCCATGTTTGTCTGTCTGTCTGTG----TGTCCAT--------CT--------T---AT--TTGAGACCATASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........ACGCTTT-CG-TACTGGTCT--GTGC-----AC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...........GCTTT-CG-TACTGGTCT--GTGC-----AC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
............................................................................................................ATATGAC-AAGAGTAAGTGCTA...............................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................CAAAAGCCGAGTCGATGT.........................................................................1811.0010000100000
........TACGCTTT-CG-TACTGGTCT--GTGC-----ACA----------------------------------------------------TC------..........................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................GAAGGAAGCATTTCCGACCCC.......................................................................................................................2140.2510100000000
......................................................................................................................................................................................................................................................................................................................................................AAGGAAGCATTTCCGACCCCA......................................................................................................................2140.2510100000000
........................................................................................................................................................................................................................................................................................A-------AGAGT------------------------------GGATGTGTGTAAC.................................................................................................................................................1940.2510100000000
.......................................................................................................................................................................................................................................................................................................................................................AGGAAGCATTTCCGACCCC.......................................................................................................................1960.1710100000000
..................................................................................................................................................................................................................................................................................................AGT------------------------------GGATGTGTGTAACATCC.............................................................................................................................................20100.1010100000000
...................................................................................................................................................................................................................................................................................................................................................................CGACCCCATAAAGTATATATATTTT.....................................................................................................25100.1010000000010
..................................................................................................................................................................................................................................................................................................AGT------------------------------GGATGTGTGTAACATC..............................................................................................................................................19120.0810100000000
..................................................................................................................................................................................................................................................................................................................................................CCAGAAGGAAGCATTTCCGA...........................................................................................................................20130.0810100000000
..............................................................................................................................................................................................................................................................................................................................................................................AGTATATATATTTTTGATCAG..............................................................................................21140.0710000000010
droPer2
TCGA-C-GTACGCTTT-CG-TACTGGTCT--GTGC-----ACA----------------------------------------------------TC------CAAGGATATGAC-AAGAGTAAGTGCTACTAA------------------TC--------------------------------A----AAATCAAAA---------T----C-T---------------TTGTAAACGCGATATTTTTAT---------------ACCCGATAATCAA-------AGAGT------------------------------GGATGTGTGTAACATCCAGAAGGAAGCATTTCCGACCCCATAAGGTATATATATTTTTGATCAGCTTCAAAAGCCGAGTCGATGTTGCCATGT-TGTCTGTCTGTCTGTG----TGTCCAT--------CT--------T---AT--TTGAGACCATASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........ACGCTTT-CG-TACTGGTCT--..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003300000
.........ACGCTTT-CG-TACTGGTCT--GTGC-----.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
.......................................................................................................................................................................................................................................................................................................................................GTGTGTAACATCCAGAAGGAA.....................................................................................................................................21200.051000001
droWil2
ATGA-T-TTGCACTAT-GT-TACTGAAAA--ACAA-----GCA----------------------------------------------------AT------CGTGGATAGAAG-ATGAAAAA------------------------------------------------------------------------------------ATAATTGCT--CAA-----------------AGC--ATTAATTAT---------------ACTATACACCCAT-------A---------GGTAT--TAAAGTCGCCA-------AAATGTATGTAACAGGCAGAAGGAAGCTTCTCCGACCCCATAAAGTATATATATTTTTGATCAGGATCAACAACCGAGTCGATCTAGCCATGTCTGTCCGTCTGT------------------------ATGAACACGCAG--ATCTCGGAGACTATASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................TCGATCTAGCCATGTCTGTCCG..........................................................2260.17101000
..................................................................................................................................................................................................................................................................................................................................................................................................................CGATCTAGCCATGTCTGTCCGT.........................................................22130.15202000
...............T-GT-TACTGAAAA--ACAA-----GCA----------------------------------------------------AT------CGTGGA....................................................................................................................................................................................................................................................................................................................................................................................27160.13202000
......................................................................................................................................................................................................................................................................................................................................................................................................................CTAGCCATGTCTGTCCGTC........................................................19120.08110000
.........................................................................................................................................................................................................................................................................................................................................................................................................CAACCGAGTCGATCTAGCCATGTCTG..............................................................26160.06100010
......................CTGAAAA--ACAA-----GCA----------------------------------------------------AT------CGTGGAT...................................................................................................................................................................................................................................................................................................................................................................................23160.06101000
..............AT-GT-TACTGAAAA--ACAA-----GCA----------------------------------------------------AT------CG........................................................................................................................................................................................................................................................................................................................................................................................24170.06101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCGTCTGT------------------------ATGAACACGCAG--A..............24180.06100010
...............T-GT-TACTGAAAA--ACAA-----GCA----------------------------------------------------..................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GT------------------------ATGAACACGCAG--ATCTCGGAGA.....24200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------ATGAACACGCAG--ATCTCGGAGACT...25200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAG--ATCTCGGAGACT...18200.05110000
............................................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGCTT.................................................................................................................................20200.05101000
............................................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGCTTCTCC.............................................................................................................................24200.05100010
................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATCTAGCCATGTCTGTC............................................................21200.05100100
droVir3
GCAA-T-TGTCTTTTT-A----AAAATAT--ACGA-----ATA----------------------------------------------------TT------CTACTATAACAC-AATAATATATACTA---ATGAAAT-------------------TT---------------------------------TCAAGA---------T----C-G---------------GTA-----------------------------------------------------TGAGTATAAGGATATATTGTATTTGTGCAAAATCCAAATGTATATAACAGGCAGAAGAAACCATCTCCGACCCCATAAAGTATATATATTCTTGATCAGCACCAATAGCCGAGTCGATCTAGCCATGTCCGTCTGTCTGTCTGTCCGTCT----GT----CCGTAT---------G--ATCTCAGAACCTATASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCACCAATAGCCGAGT...............................................................................26200.65130000000000000000000000000000000000130000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCACCAATAGC....................................................................................24200.55110000000000000000000000000010000001000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................AAGTATATATATTCTTGATCAGCA............................................................................................24200.408000000000000000000000000000080000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................AAGAAACCATCTCCGACCCC.......................................................................................................................2030.331000000000000000000000000000000000000000000000000000000000000001
.................................................................................................................................................................................................................................................................................................................................................................................................................TCGATCTAGCCATGTCCGTCTG..........................................................22200.306003000000000000000000000000000000000000300000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CGATCTAGCCATGTCCGTCTG..........................................................21200.306000000000000000000000000000060000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCACCAATAGCC...................................................................................25200.255000000000000000000000000000000010000400000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCACCAATAGCCG..................................................................................23200.255000000000000000000000000030000001100000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGCACCAATAGCCGAG................................................................................27200.204000000000000000000000000000000000000004000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCACCAATA......................................................................................22200.204000000000000000000000000000040000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGCACCAATAGCCG..................................................................................27200.204000001200000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TCCAAATGTATATAACAGGCAGAAGA.......................................................................................................................................2650.201000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCACCAATAG.....................................................................................23200.153000000000000000000000000000300000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCACCAATAGCCG..................................................................................26200.153000000200000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCACCAATAGCCGAGTCG.............................................................................28200.153000000100000000000000000000100010000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TCCAAATGTATATAACAGGCAGAAG........................................................................................................................................25200.153000000000000000000000000010010000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGCACCAA........................................................................................21200.153000000000000000000000000030000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGCACCAATAGCC...................................................................................24200.153000000300000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TGATCAGCACCAATAGCCGAGTCGATC..........................................................................27200.153000000000000000000000000000000000000000000000000000000000000003
..............................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATCTAGCCATGTCCGTCT...........................................................24200.102000000001100000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCACCAATAGCCGAGTCG.............................................................................27200.102000000000000000000000001000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TCGATCTAGCCATGTCCGTCTGTCTG......................................................26200.102000020000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGCACCAATA......................................................................................21200.102000020000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TCCAAATGTATATAACAGGCAGAA.........................................................................................................................................24200.102000000000000000000000001000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TCAGCACCAATAGCCGAGTCGATCTAGC......................................................................28200.102002000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGCACCAATAGC....................................................................................25200.102000000002000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCACCAATAGCCGAG................................................................................25200.102000000000000000000000000000000000200000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCACCAATAGCCG..................................................................................22200.102000000000000000000000000000000000020000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CGAGTCGATCTAGCCATGTCC...............................................................21200.102000000000000000000000000000000020000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TCAGCACCAATAGCCGAGTCG.............................................................................21200.102000000000000000000000000110000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAGCCATGTCCGTCTG..........................................................19200.102000000000000000000002000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................AACCATCTCCGACCCCATAAAGT................................................................................................................23180.061000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGCACCAATAGCCGA.................................................................................24200.051000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGCACCAAT.......................................................................................22200.051000001000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AGCACCAATAGCCGAGTCGA............................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................ATATATTCTTGATCAGCACCAATAGCC...................................................................................27200.051000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCACCAATAGCCGAGTCGA............................................................................26200.051000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGCACCAATAGCCGA.................................................................................22200.051000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................CAATAGCCGAGTCGATCTAGCCATG..................................................................25200.051000000000000000000000000000000000000010000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................GTATATATATTCTTGATCAGCACCAAT.......................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TAAAGTATATATATTCTTGATCAGCAC...........................................................................................27200.051000000000000000000000000000010000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATCTAGCCATGTCCGTCTGTC........................................................25200.051000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CACCAATAGCCGAGTCGATCTAG.......................................................................23200.051000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TCCAAATGTATATAACAGGCAGA..........................................................................................................................................23200.051000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................CCAATAGCCGAGTCGATCTAG.......................................................................21200.051000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGCACCAATAGC....................................................................................23200.051000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GCACCAATAGCCGAGTCGATCTAGCC.....................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAGCCATGTCCGTCTGTCT.......................................................22200.051000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGCACCAATAGCCGAG................................................................................23200.051000000100000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................ACCAATAGCCGAGTCGATCT.........................................................................20200.051000000000000000100000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TCCAAATGTATATAACAGGCAGAAA........................................................................................................................................25200.051000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................ACCCCATAAAGTATATATATTCTTGATCA...............................................................................................29200.051000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................AGTCGATCTAGCCATGTCCGTC............................................................22200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GCCGAGTCGATCTAGCCATG..................................................................20200.051000000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TAGCCGAGTCGATCTAGCCATGTCCG..............................................................26200.051000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TCCAAATGTATATAACAGGCA............................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCTGTCTGTCCGTCT----GT----CCGTA............................26200.051000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................CCAATAGCCGAGTCGATCTAGCCATG..................................................................26200.051000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................ATATATATTCTTGATCAGCACCAAT.......................................................................................25200.051000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TCTCCGACCCCATAAAGTATA.............................................................................................................21200.051000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATCTAGCCATGTCCGT.............................................................20200.051000000000000000000000000000000000100000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGCACCAATAGCCGA.................................................................................27200.051000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGCCATGTCCGTCTGTC........................................................20200.051000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGCACCAATAG.....................................................................................24200.051000001000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TATATATTCTTGATCAGCACCAATAGCC...................................................................................28200.051000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCACCAATAGCCGA.................................................................................23200.051000000000000000000000000100000000000000000000000000000000000000
droMoj3
TGTT-C----------------------T--TTGT-----GCGTC--------------------------------------------------CT-------AAAGATGCATT-GTAAGTAAATGT-------------------------------------------------------------------------------------------------------------------TGCTAATTAT---------------ACCCTGAACCCATTAAAAATGGGAAATCAGGGTATAATAGTTTTGT-T-------AAATGTATGTAACAGGCAGAAGGAGGCGTGGCAGACCCCATAAAGTATATATATTCTTGATCAGGTCGACAAGTTGAGTCGATTTAGCCCTGTCCGTCTGTCCGTATGT--------------------TTAAACGCGTCG--ATCTTAGAGGATATASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGAGGCGTGGC..............................................................................................................................21200.357000070
...............................................................................................................................................................................................................................................................................................TGGGAAATCAGGGTATAATAGTTTTGT-......................................................................................................................................................................27200.255400010
...............................................................................................................................................................................................................................................................................................TGGGAAATCAGGGTATAATAGTTT..........................................................................................................................................................................24200.204000040
...............................................................................................................................................................................................................................................................................................TGGGAAATCAGGGTATAATAGTT...........................................................................................................................................................................23200.204400000
....................................................................................................................................................................................................................................................................................................................................AATGTATGTAACAGGCAGAAGG.......................................................................................................................................22200.153300000
....................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAGCCCTGTCCGTCTGTC........................................................21200.102200000
................................................................................................................................................................................................................................................................................................GGGAAATCAGGGTATAATAGTTTTG........................................................................................................................................................................25200.102200000
...........................................................................................................................................................................................................................................................................................................................................GTAACAGGCAGAAGGAGGCGTGGCAG............................................................................................................................26200.102200000
...............................................................................................................................................................................................................................................................................................TGGGAAATCAGGGTATAATAGTTTTGC-......................................................................................................................................................................27200.102100010
................................................................................................................................................................................................................................................................................................................ATAGTTTTGT-T-------AAATGTATGTAACAGG..............................................................................................................................................27160.061100000
............................................................................................................................................................................................................................................................................................................................................................................AAAGTATATATATTCTTGATCAGGTC...........................................................................................26190.051000010
.................................................................................................................................................................................................................................................................................................................................................................................................................TCGATTTAGCCCTGTCCGTCTGTCC.......................................................25200.051100000
....................................................................................................................................................................................................................................................................................................................................................AGAAGGAGGCGTGGCAGACCCC.......................................................................................................................22200.051000100
...............................................................................................................................................................................................................................................................................................TGGGAAATCAGGGTATAATAGTTTC.........................................................................................................................................................................25200.051010000
...........................................................................................................................................................................................................................................................................................................................T-------AAATGTATGTAACAGGCAGA..........................................................................................................................................21200.051000010
...............................................................................................................................................................................................................................................................................................TGGGAAATCAGGGTATAATAGT............................................................................................................................................................................22200.051000001
..................................................................................................................................................................................................................................................................................................................................................................................TATATATTCTTGATCAGGTC...........................................................................................20200.051001000
...............................................................................................................................................................................................................................................................................................TGGGAAATCAGGGTATAATAGTTTT.........................................................................................................................................................................25200.051100000
...............................................................................................................................................................................................................................................................................................TGGGAAATCAGGGTATAATAGTTTTG........................................................................................................................................................................26200.051000001
..............................................................................................................................................................................................................................................................................................ATGGGAAATCAGGGTATAATAGTTTTGT-......................................................................................................................................................................28200.051100000
..................................................................................................................................................................................................................................................................................................................................................................................................................CGATTTAGCCCTGTCCGTCTG..........................................................21200.051100000
droGri2
CACA-C-GTACGCATT-TGACACAGA------TAC-----ACA----------------------------------------------------CG------CAC--ATATAAA-GAGA----------------TACAGTGAGCGA-------------------------------------------------------------T----C-GATAAGAGGGAACACATTAT---------------AT---------------AGACAAGAATCGT-------ATAATTA----ATATATAA--GTTGTGG-------CAAATTGTGTAACAG-CAGATGGAAGCATCTACGACCCCATAAAGTATATATATTCTAGAA---------GAGCAGTATCGATTTAGCCATATCCGACTAACTATC----------------------------------------TCAGAGACTATASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
TCGA-C-GTGCGTTCG-CG-GCCAGT-------TC-----TTA----------------------------------------------------AC------AATGAATA------------------------------------------------------------------TTAAAGA-----------G----AAAAAT------------TAAA--------------------CTCATTTGTAT---------------ACCCT-----TGC-------AG------AGGGTATTTTAATTTTGGTC-------AAAAGTATGGAATGCAGTGAAGAAGACATCTCCGACTCCATAAAGTATATATATTCTTGATCAGGAACACCTGCTGAGTCGATATGAGCATGTCCGTCTGTCTGTCTGTT--------------------TTTACGCAAACTAGC--CTCTTAGCTTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................TGCTGAGTCGATATGAGCATGTCCGTCT...........................................................2860.171010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCATGTCCGTCTGTCTGTCTG..................................................24200.102200000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TATGAGCATGTCCGTCTGTCTG......................................................22200.102000101
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCATGTCCGTCTGTCTGTCTGTT--------------------............................26200.051001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCATGTCCGTCTGTCTGTCTGTT--------------------A...........................27200.051000010
......................................................................................................................................................................................................................................................................................TGC-------AG------AGGGTATTTTAATTTTGGTC-------..............................................................................................................................................................25200.051001000
droBip1
AGGA-C-GCACGCTTC-AA-TTTTAGC-----TAC-----G-----------------------------------------CTGCACGTGTATCA-------CAACTATACGAC-ACATT-------------------------------TCAATATTTATAGGTACAATGAATATTA----------------------------------------TA----------TTTTATTTGTGA-TTTTTTAT---------------ACCCT-----TGC-------AG------AGGGTATTATAATTTTGGTC-------AAAAGTGTGCAATGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCGTCTGTCTGTTTCT------------------------ACGCCAACTAGT--CTCTCAGTTTTSizeHit CountTotal NormTotal
No Reads
droKik1
TTAA-A-ATCCGATTG-TA-T-CTTG--T--CTGC-----AAA----------------------------------------------------CT------AAATTATATTAC-TCCGGTAA-----ACCAA------------------GC--------------------------------A----AAACGA------------C----A-T---------------TTATTTATTATTTATTTTTAT---------------ACCCT-----TGC---------------AGGGTATTATAATTTCAGTC-------AGAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCAAAAGCCGAGTCGATCTAGCCATGTCCGTCTGTCTGTTTCT------------------------ACGCAAACTAGTCCCTCAGTTTTAASizeHit CountTotal NormTotal
No Reads
droFic1
CTCT-T-GTG------------TTTGTTT--GTGG-----TGA----------------------------------------------------TA------CATAGTTAGGGT-GAAAATCGTTGTTTTTCA------------------TC--------------------------------A----GG--CGATT---------T----T-T---------------CTATTAATTTTCCATATTTAT---------------ACCCT-----TGC-------AGAGCAAAAGGGTATTATAATTTCAGTT-------AGAAGTTTGCAACGCAGTGAAGGAGACACCTCAGACCCCATAAAGTATATATATTCTTGATCAACATCACAAGTAGAATCAGAATACGTCTGTTCGTCTGTCCGTCTGTCT----GTTTCT------------C-------------TTCAAACTATASizeHit CountTotal NormTotal
No Reads
droEle1
GCT-----------TT-TA-TAATGCTAA--ATGC-----AAA----------------------------------------------------CC------CAAACA--------AATATAAGTTAAAGCTA------------------TT--------------------------------T----AT---------------TAAACTGCC--TTA-------------TA---TTATTATTTTTAT---------------ACCCT-----TGC-------AG------AGGGTATTATAATTTCAGTC-------AGAAGTTTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAGCATCACTAGGCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCC----GTCCGT------------------------------------CSizeHit CountTotal NormTotal
No Reads
droRho1
TTGA-C-ATAGACTTT-TG------------ATGT-----ACA----------------------------------------------------TC------CAGAATTAAAAA-AAGCTTAGGT-CGACTGG------------------GT------------TG---------C--------A----ATATGAAAA---------C----C-T-TATAAGGGTTAAGG--GTTTCTAC--GATATTTAT---------------ACCCTTTACTCGT-------AGAGTAAAATGT--------------------------AATATGTAACAATTAGAAGGAAGCGTTTCCGACCCTATAAAGTATATATATTCTTGTTCAGGATCACTAGCCGATACGATCTAGCCATGTCCGTCTGTCCGTCTGTCTGTGT----GT----CCGTATGAACGCTGAG--ATCTCGGAAACTATASizeHit CountTotal NormTotal
No Reads
droBia1
CGAA-C-TAATGGTTC-CG-GGCTTATGTACATGATTTGAGCTTACAAGGATATT-TACCTAATTGTAGTA-------------------------------------------------------------------------------------------------------------TAGATAAAAATAAACAA------------C------A---------------T----------AGTTTATTAT---------------ACCCGTTACTCGT-------AGAGTAAAAGGGTATACTAGAGTCG----------GAAAGTGAGTAACAGATAGAAGGAAGCGTTTCCGACCCCATAAGGCGTATTTATTCTTGATCAGGATCATAAGCCGAATCAATCTAGCCATGTCCGTCTGTCCGT------------------------ATGAACGCTGAG--ATCTCCGAAACTACASizeHit CountTotal NormTotal
No Reads
droTak1
CGTA-C-ATTTTCTT------GCTCCTCG--TTAC-----ACA----------------------------------------------------TC------TTA------------------GT----------------------------------------------------------------------------------------------------------------------GTTTATAAT---------------ATCTT-----T-----------GGTAATAGGGTATATTGTATTCGTGC-------AAAAGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAGGGTCACTAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGT--------------------ATGAACGCTGAG--ATCTCAGAAACTACASizeHit CountTotal NormTotal
No Reads
droEug1
TGA--G-ATACATTTT-TT-TCCGAG--TGCGAAAATAAAACTAACATAAAAACTGCACGTAATAATAATAATGCACGAAACCTGCCCCCGTAT-----------------------------------------------------------------------------------------------------GAAAA---------C------A---------------GT------ACAAGATTTTTAT---------------ACTCGTTACTCGT-------GGAGTAAATGGGTTAAATAGATTTGTTG-------AAAATTATGTAACAGATAGAAGGAAGCGTTTCCGACCCTATAAAGTATATATATTTTTGATCAAGATCAATAGCGAAGTTTATTGAGCCATGTCCGTCCGTCTGTCCGT--------------------ATGAACGCTGGG--ATCT---------CASizeHit CountTotal NormTotal
No Reads
dm3
CTTT-------------TC-TCATGCACC--ATGT-----GCG----------------------------------------------------TA------CGAGTATAAGCC-GAGT-----------------ACAGCAAGCGACCTACCAAAGATTTTAAGTTCA-----------------------ATTAAA---------AT--------------------------------------------------------------------AGT-------TGGGTAAAGGTGTATACTAGATTCGTTCAA-----AAATGTATGTAAC----AGAAGGAAGCGTTTCCGACCCTATAAATTATATATATTCTTGATCAGGATCAATAGCCGAGTCGATCTACCCATATCCGTCGGCCGGTCTGTCT----GTCCTTCATTCCGTATGAACGTCAAG--ATCT---------CASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................................................A-----------------------ATTAAA---------AT--------------------------------------------------------------------AGT-------TGGGTAAAG........................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TACCCATATCCGTCGGCCGGTCTGTC................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCGAGTCG.............................................................................25203.70741000000000000000000000000000000000000000002000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000000001600000000016000000000000000000000000000000000300040000000000014000000000000000502000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002070000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TCGATCTACCCATATCCGTCG...........................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCGAGTCGA............................................................................26202.6052000000000000000000000001000000000000000000000000000000000000000000000000000002000000200000000000000000000000000000000000000000000000003000000000140000000000000000000000000000000000000000000000000000000000000000000004000002400020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCGAGTC..............................................................................24202.204400000000000000000000000000000000000000009000000030000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000030000000000000000000000000000000000000000000900000000000000000000001100400000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000
............................C--ATGT-----GCG----------------------------------------------------TA------CGAGTATAAGC...............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CATATCCGTCGGCCGGTCTGTCT----GTCCT......................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................CCGAGTCGATCTACCCATATCCGTCGGCCA.......................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCATTCCGTATGAACGTCAAG--ATC............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCT----GTCCTTCATTCCGTATGAAC.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCTACCCATATCCGTCGGCCG.......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTCCGTATGAACGTCAAG--ATC............2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTCGGCCGGTCTGTCT----GTC........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TACCAAAGATTTTAAGTTCA-----------------------ATTAAA---------A................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTCCGTATGAACGTCAA..................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTCATTCCGTATGAACGTCAAG--...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TAAC----AGAAGGAAGCGTTTCCG............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................GGGTAAAGGTGTATACTAGATTCG........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTCATTCCGTATGAACGTCAAG--A..............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCGAG................................................................................22200.85170000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000600000020000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCGAGT...............................................................................23200.80160000001000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000001000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000400000000
....................................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGGATCAATAGCC...................................................................................26200.70140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000002000000000000000000000000000000000000000000000000000000000200100000000100000000000000000000200000000000000000000000000000000000000000000000000000000000000000000001000000400000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGGATCAATAGCCGAGTC..............................................................................26200.60120000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000010000000000000000000000000000020000010000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000100000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCG..................................................................................20200.55110000000000000000000000000000000000000000001020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001500000000000000000000000000100000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCC...................................................................................19200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGGATCAATAGCC...................................................................................21200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000080000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAGGATCAATAGCCGAG................................................................................25200.50100000000000000000000000000000000000000000000000020010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000010000000000000000000200000
..........................................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGGATCAATAGCCG..................................................................................21200.50100000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000010000000000000000000000100000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGTATGAACGTCAAG--ATCT---------..2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AAC----AGAAGGAAGCGTTTCCGA...........................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AGGATCAATAGCCGAGTCGATCTA........................................................................24200.4590000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000200220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAATAGCCGAGTCGAT...........................................................................27200.4590000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................ATCAGGATCAATAGCCGAGTC..............................................................................21200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000060000000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................ATCAATAGCCGAGTCGATCTA........................................................................21200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000040000000000000000000000000000001000000000000003000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGGATCAATAGCCGAG................................................................................27200.4080000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000100000
droSim2
TCGA-C-ATAGAATAT--GTTAT--A--T--CTGT-----ATA----------------------------------------------------TCCACGACAAAGCATTTGTA-AAAAGT---------------------------------------GGAAGTG---------CGGA-----------TACG----AAACAT------------TATA--------------------CCTAAGTATACATATGTATGTACCATACCCTCTACT---------------------------------CCTTA-------AAAAGTATGTAACAATTGAAAGA---------TGGCCCTATAAAGTAT-TATATTCTCGATCGGGTTCAGTAGCCGAGTCGATCTAGACATATCCGTATGTCCGTCCGTTCGTTT----GT----CCGTATGAACATCAAG--ATCT---------TGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................................................................................................................................................................TCGATCTAGACATATCCGTAT...........................................................2111.00100001000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TTCTCGATCGGGTTCAGTAG.....................................................................................2011.00100000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................TAGCCGAGTCGATCTAGAT.....................................................................19110.09100000000001000000
droSec2
GCGT-G-GAATATTTT-TG----TGGTTT--GTGG-----GCG----------------------------------------------------TT------AGAGTA-GGCGT-GACAACATTTGAAAACAA------------------AC--------------------------------C----TG--CGCTT-----TGTCAATCAGGC--A--------------------TACTCGTACTTAT---------------ACCCGTTACTCGG-------AGAGTAAAAGGGTATACTACATTCGTTT-------AAAAGTATGTAAAAGGCAGAAGGAAGCGTTTCCGACTATATAGAGTTTATAAATTTTTGACCAGGATTAATAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGT------------------------ATGAACGCCTCG--ATCTCAGGAACTGTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................GCCGAGTCGATCTAGCCATGTCCG..............................................................24200.2555000
............................................................................................................................................................................................................................................................................................................................................................................................................CCGAGTCGATCTAGCCATGTCCGT.............................................................24200.1533000
...........................................................................................................................................................................................................................................................................................................................................................................................................GCCGAGTCGATCTAGCCATGTCCGTC............................................................26200.1533000
................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTCTGTCCGT------------------------ATGAACGCC....................2170.1411000
........................................................................................................................................................................................................................................................................................................................................................................................................ATAGCCGAGTCGATCTAGCCA....................................................................21200.1020020
...........................................................................................................................................................................................................................................................................................................................................................................................................GCCGAGTCGATCTAGCCATGTCCGTCT...........................................................27200.0511000
..........................................................................................................................................................................................................................................................................................................................................................................................................AGCCGAGTCGATCTAGCCATGTCCGT.............................................................26200.0510010
...........................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCGTCTGTCCGT------------------------ATGAACG......................24200.0510100
.........................................................................................................................................................................................................................................................................................................................................................................................................TAGCCGAGTCGATCTAGCCATGTC................................................................24200.0511000
................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATCTAGCCATGTCCG..............................................................19200.0510010
........................................................................................................................................................................................................................................................................................................................................................................................................ATAGCCGAGTCGATCTAGCCATGTCC...............................................................26200.0511000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCATGTCCGTCTGTCCGT------------------------ATGAA........................26200.0511000
droYak3
TACT-G-------------------ATGT--GCAC-----AGA-G--------C-----------------------AAA---------------AT------T--TGTTATGACTGACTGTAAGTCACACTTA------------------TT--------------------------------T----AA-----T---------AC-AT-C-C---------------GTTTGAAG---GCATTTTCAT---------------ACCCGTTATTTGA-------AGAA-------------TAGATTCGT-T-------AAAAGTATGTAACAGGCAGAAGGAAGCGTTTTCGAGCATATAAAGTAT--ATATTCTTGATCATGATCAATA-----GTCAATCTGGCCATGTCCGTCTGTCTGTCCGT--------------------ATGAACGTCGA---------AGAACTATASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................T-T-------AAAAGTATGTAACAGGCAGAAGGA......................................................................................................................................26200.05100100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTCTGTCTGTCCGT--------------------ATG..........................19200.05101000000000
droEre2
TCGAATTGAAAAGCTCACT-GATTGGTAT--TTGAATTAAGC------AAAAGCTAA---------------------------------------------------ACATAAT-AAAATTAAATTGAACACA------------------CC--------------------------------A----AAGTT---G---------T----T-T---------------CATTACAAGCGACATAATAAT---------------ACCCGTTACTCAT-------AGAGTAAAAGGGTATACTAGATTCTTTG-------AAAAGTATGTAACAGTCAGAAGGAATCGTTTCCGACTATATAAAGTATTTATATTCTTGATCACGATCAAGACCCGAGTTGAACTAGCCATGTCCGTCTGTCTGT------------------------ATGAACGCCTCG--ATCTCAGGAACTACASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
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Generated: 05/17/2015 at 10:58 PM