ID:

dps_627

 Coordinate:

2:18150825-18150975 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-39.4 -38.7 -38.6

Flybase annnotation

CDS [Dpse\GA20509-cds]; exon [Dpse\GA20509:2]; intron [Dpse\GA20509-in]

No Repeatable elements found

mature
  1. Unknown_group_148:8713-8732 -
  2. dps_627  2:18150932-18150951 -
  3. Unknown_singleton_125:3832-3851 -
  4. XL_group1a:1139399-1139418 +
  5. Unknown_group_369:9713-9732 -
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CGAAACACATAACACAAGTGAAGAGACAACAAGTGTTCTGTTCAGTGAGACACCGTGTCTGCGTGGTCTCTTTCTGTTTTGTCAGTGACGAGACAGTAAAGGGAAAAAGTGGTGACCGTTGTTTGCGAACTATGATATATATTCGACTTTACCACATATTAAACCATGTAAGCAACTAAACTGGTCTTAATTCTTTTACAGGACTTGGTTTCAACGTAATGGGTGGCAAGGAACAAAATTCTCCAATTTAT
**************************************************.(((((((.((((((((((((((((((((((((...)))))))))).)))))))....(((((((..((((......................)))).)))))))........))))))).))).......))))................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 GSM343916
embryo
 V112
male body		 GSM444067
head
 M059
embryo
 SRR902010
ovaries
..........................................................................TGTTTTGTCAGTGACGAGAC............................................................................................................................................................. 20 0 5 2.60 13 12 0 1 0 0 0 0
..........................................................................TGTTTTGTCAGTGACGAGACAG........................................................................................................................................................... 22 0 5 2.00 10 9 0 1 0 0 0 0
..........................................................................................................................................................................................TTAATTCTTTTACAGGACTTGGTT......................................... 24 0 1 2.00 2 0 2 0 0 0 0 0
..........................................................................TGTTTTGTCAGTGACGAGACA............................................................................................................................................................ 21 0 5 1.60 8 7 0 0 1 0 0 0
..........................................................................TGTTTTGTCAGTGACGAGA.............................................................................................................................................................. 19 0 6 1.00 6 6 0 0 0 0 0 0
................................................................................................................TGACCGTTGTTTGCGAAA......................................................................................................................... 18 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................TTCAACGTAATGGGTGGCAAGGA................... 23 0 1 1.00 1 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................GTAATGGGTGGCAAGGAACA................ 20 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................TTTCAACGTAATGGGTGGCAAGGA................... 24 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................................AGGACTTGGCTTCAACGTAATGGGT........................... 25 1 1 1.00 1 1 0 0 0 0 0 0
.......CATAACACAAGTGAAGAGACATT............................................................................................................................................................................................................................. 23 2 2 0.50 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................ATGTTATGGGTGGCAAGGA................... 19 2 2 0.50 1 1 0 0 0 0 0 0
..AAACACATAACACAAGTGAAGAGACA............................................................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0
..........................................................................TGTTTTGTCAGTGACGAGACAGA.......................................................................................................................................................... 23 1 5 0.40 2 2 0 0 0 0 0 0
...........................................................................GTTTTGTCAGTGACGAGAC............................................................................................................................................................. 19 0 17 0.35 6 6 0 0 0 0 0 0
.........................................................................ATGTTTTGTCAGTGACGAGACAAA.......................................................................................................................................................... 24 3 6 0.33 2 2 0 0 0 0 0 0
..........AACACAAGTGAAGAGACA............................................................................................................................................................................................................................... 18 0 4 0.25 1 0 0 0 0 1 0 0
...........................................................................GTTTTGTCAGTGACGAGACA............................................................................................................................................................ 20 0 17 0.24 4 4 0 0 0 0 0 0
.........................................................................CTGTTTTGTCAGTGACGAGAC............................................................................................................................................................. 21 0 5 0.20 1 0 0 0 0 0 1 0
......................................AATTCAGTGAGAGACCGTGTCTGCGTGG......................................................................................................................................................................................... 28 3 5 0.20 1 1 0 0 0 0 0 0
..........................................................................TGTTTTGTCAGTGACGAGAAA............................................................................................................................................................ 21 1 5 0.20 1 1 0 0 0 0 0 0
..........................................................................TGTTTTGTCAGTGACGAGAA............................................................................................................................................................. 20 1 6 0.17 1 1 0 0 0 0 0 0
..........................................................................TGTTTTGTCAGTGACGAGACAAA.......................................................................................................................................................... 23 2 6 0.17 1 1 0 0 0 0 0 0
..........................................................................TGTTTTGTCAGTGACGCGA.............................................................................................................................................................. 19 1 6 0.17 1 0 0 1 0 0 0 0
...........................................................................GTTTTGTCAGTGACGAGACAG........................................................................................................................................................... 21 0 16 0.13 2 2 0 0 0 0 0 0
...........................................................................GTTTTGTCAGTGACGAGACAGA.......................................................................................................................................................... 22 1 16 0.13 2 2 0 0 0 0 0 0
...........................................................................GTTTTGTCAGTGACGAGA.............................................................................................................................................................. 18 0 18 0.11 2 2 0 0 0 0 0 0
..............................................................................TTGTCAGTGACGAGACAGAAAAGGGA................................................................................................................................................... 26 1 11 0.09 1 0 0 0 0 0 0 1
.............................................................................................................TGTTGACCGTTGTTTGCGAA.......................................................................................................................... 20 1 11 0.09 1 1 0 0 0 0 0 0
...............................................................................................................GTGACCGTTGTTTGCGAGCTATG..................................................................................................................... 23 1 11 0.09 1 1 0 0 0 0 0 0
..............................................................................TTGTCAGTGACGAGACAGAAAAG...................................................................................................................................................... 23 1 13 0.08 1 0 0 0 1 0 0 0
...........................................................................GTTTTGTCAGTGACGAGACAA........................................................................................................................................................... 21 1 17 0.06 1 1 0 0 0 0 0 0
............................................................................TTTTGTCAGTGACGAGAC............................................................................................................................................................. 18 0 17 0.06 1 1 0 0 0 0 0 0
...........................................................................GTTTTGTCAGTGACGAGAA............................................................................................................................................................. 19 1 19 0.05 1 1 0 0 0 0 0 0
..................................................................................................GATGGAAAAAGGGGTGACC...................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................CTTAAACGTAATGGATGGC........................ 19 3 20 0.05 1 1 0 0 0 0 0 0

Anti-sense strand reads

GCTTTGTGTATTGTGTTCACTTCTCTGTTGTTCACAAGACAAGTCACTCTGTGGCACAGACGCACCAGAGAAAGACAAAACAGTCACTGCTCTGTCATTTCCCTTTTTCACCACTGGCAACAAACGCTTGATACTATATATAAGCTGAAATGGTGTATAATTTGGTACATTCGTTGATTTGACCAGAATTAAGAAAATGTCCTGAACCAAAGTTGCATTACCCACCGTTCCTTGTTTTAAGAGGTTAAATA
**************************************************.(((((((.((((((((((((((((((((((((...)))))))))).)))))))....(((((((..((((......................)))).)))))))........))))))).))).......))))................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 SRR902010
ovaries
............................................................CGCACCAGAAAAAGACAAAACAGTCACT................................................................................................................................................................... 28 1 14 1.00 14 12 1 1
........................................................CAGTCGCACCAGAGTAAGA................................................................................................................................................................................ 19 2 1 1.00 1 1 0 0
........................................................CAGTCGCACCAGAGTAAG................................................................................................................................................................................. 18 2 2 0.50 1 1 0 0
............................................................CGCACCAGAGAAAGCCAAAACAGTCACT................................................................................................................................................................... 28 1 3 0.33 1 1 0 0
................................................................................................ATTTCCCTTTTTCACAACTGGCAACA................................................................................................................................. 26 1 9 0.22 2 2 0 0
.........................................................................AAAAAAACAGTCACTGCTCTGT............................................................................................................................................................ 22 2 6 0.17 1 1 0 0
................................................................CCAGGGAAAGCCAAAACAGTCACT................................................................................................................................................................... 24 2 9 0.11 1 1 0 0
......TGTATTGTGTTCGCTTCTCTGTTG............................................................................................................................................................................................................................. 24 1 15 0.07 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:18150775-18151025 - dps_627 CGAA---------ACACATAACACAAGTGAAGAGACAACAAGTGT--TCTGTTCAGTGAGACACCGTGTCTGCGTGGTCTCTTTCTGTTTTGTCAGTGAC-------------GAGACAGTAAAGGGAAAAAGTGGTGACCGTTGTTTGCGAACTATGATATA----TATTCGAC------TTTACCACATATTAAACCATGTAAGCAACTA--AACTGGTCTTAATTCTTTTACAGGACTTGGTTTCAACGTAATGGGTGGCAAGGAACAAAATTCTCCAATTTAT
droPer2 scaffold_3:489996-490246 - CGAA---------ACACATAACACAAGTGAAGAGACAAAAAGTGT--TCTGTTCAGTGAGACACCGTGTCTGCGTGGTCTTTTTCTGTTTCATCAGTGAC-------------GAGACAGTACAGGGAAAAAGTGGTGACCGTTGTTTGCGAACTATGATATA----TATTCGAC------TTTACCACATATTAAACCATGCAAGCAACTA--AACTGGTCTTAATTCTTTTACAGGTCTGGGTTTCAACGTAATGGGTGGCAAGGAACAAAATTCTCCAATTTAT
droWil2 scf2_1100000004943:13826151-13826213 - AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTTTACAGGTCTAGGTTTCAACGTTATGGGAGGCAAGGAGCAGAATTCTCCCATTTAT
droVir3 scaffold_13050:1161995-1162129 + CGA----------ACAGAGTACACAAGCACAACGAAAAAAAGTGT--TCTATGGATAGCGAAACCGAATCTGCTTCGTTTTTTGCGGTTTT-TTTGTGTG-------------CAGATCGCATTGAAAATAAGTGTTGACTGTTATTTTCGACCTCTACTA------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:30995357-30995453 - AAAA---------A-------------------------------------------------CAGTTTCTGTCTGAGTTTTTTTGACTGTGTCAGTGAAAGACACTTTTTTGCAG-----ACAATGAAAAAGTGTTAACAGTTATTTGCGAGCTATGGT-------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15116:386600-386656 - TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGGACTGGGTTTCAATGTTATGGGTGGCAAGGAGCAGAATTCTCCAATCTAT
droAna3 scaffold_13272:418366-418510 - CGAA----------------------ACAAAACGAAACAAAGTCT--ACTGCTCAGAGAGAGACCGAAACGGCATGTTTTTTTTCGGTTGCTCTCGCGAC-------------CAGAGCGTAAGCAAAAAAACGGTTAACAGTTATTTGCAAGCTATGCTTA-----TATCTAAT------TTTA-TACATGT---------------------------------------------------------------------------------------------T
droBip1 scf7180000395272:39306-39496 + A------------ACAGAAAATCGAAACAAAAAGAAACAAAGTCT--GCTGCTTAGAGAGAAACCGAAACGGCATGCTTTTTTTCGGTTGTTCTCGCGAA-------------CAGAGCGTAAGGAAAAAAACGGTTAACAGTTATTTGCAAGCTATGTTTAAAATAT----------------------------AATATGTAAGTAAATATAGATTGATTT------------------GTATGATAATGTAGTAGTTGG-----------------------TT
droKik1 scf7180000302332:694-857 + CAA----------ACTGAAAACCAAAGCAAAGAGAGACGACGTCG--GCTGTTAAGAGCGAGAGCGAAGATTCATTATTTTTTTCTGTTTTTCGCACGAG-------------TAGAGCGTAGGGGAAAAAACTTTTAACAGTTATTTGCAAGCTATGGTTTT---------------------AATACATTTAAAAACAAACA-----------------------------------------------------------------------------AACAAC
droFic1 scf7180000452364:24974-25181 + CGAAAAGTGCTCAACAGAAAACACAAATGACGACAGCAAGGGGCT--CTTGCTCAGAGCGAGAGCGAGACAGTATGAACTTTTTCGGTTGTGCTCGCACC-------------CAGAGCACTAGATGAAAAACGATCAACTGTTATTTGCGAGCTCTGATTAGAATGTATTCATTTAGACGTATGTTATGAATGTAATCATGCAGACGTCTA--GTCTGGAGTTA--------------------------------------------------------------
droEle1 scf7180000490750:3557-3693 + CGAA---------------AACCATAACAAAGAGAAACTAAGTGT--TCTGCTCAGAGCGAAAGCAAGCGTGCAAGAT-TTTTTCTAATGTTTAAGTGCA-------------GAGACCGTAAAGCGAAAAACGGTTGACAGTTATTTGCGAGCTTTGGTAAA----TAC-------------------------------------------------------------------------------------------------------------------TC
droRho1 scf7180000760434:223-368 + A------------ACAGAAAACATAAATGAAGACAGCAAGAGTCT--CTTGCTCAGAGCGAGAGCGAGACAGTATGAACTTTTTCGGTTGTGCTCGCAAC-------------GAGAGCGCAGGAAGAAAAACGGTCAACAGGTATTTGCGAGCTATGATTG------------------------------------------------------------------------------------------------------------------TTTTACTTAAC
droBia1 scf7180000302136:1687049-1687108 - TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTCCAGGCTTAGGTTTCAATGTGATGGGAGGCAAGGAGCAGAATTCGCCCATCTAT
droTak1 scf7180000413204:867-1035 - GTCA---------ACAGAAAACACTTTAAAAGAAAAAATAACTGTTTTCTG-TCCGAGACTGACAGAAAATTTT-AGATTTTTTCTGTTTTGTGAGTAAC-------------AAGACAGTTTCAGAAATAAGTGTTAACAGTTATTTACGAGCTCTGATATA----ACATTAAC------TTCCTGAC--ATTAA----------------------------------------------------------------------------------ATTACTTAA
droEug1 scf7180000409692:510520-510580 + TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTCAGGCCTAGGTTTCAACGTAATGGGAGGCAAGGAGCAAAATTCACCCATCTAT
dm3 chr3R:20890667-20890727 - TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTTCAGGCTTGGGTTTCAATGTAATGGGGGGCAAGGAGCAAAACTCGCCCATCTAT
droSim2 3r:20401473-20401540 - CTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT---CTATTTTTTAGGCTTGGGCTTCAATGTAATGGGAGGCAAGGAGCAAAACTCGCCCATCTAT
droSec2 scaffold_33:152241-152298 - TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGGCTTGGGCTTCAATGTAATGGGAGGCAAGGAGCAAAACTCGCCCATCTAT
droYak3 v2_chr2h_random_021:47352-47568 - CGAA---------------AACCAAAACAAAGAGAAACGAAAAGT--TCTGTTCAGAGCGAGAGCACACGCGCATCGCCTTTTTCGGTTGTGTTCGAGTG-------------CAGACCGCAAAACGAAAAACGGTTGACAGTTATTTGCGAGCTATGATAAG----TAT-----------------ACATAGGTAGACACACGAGGAACTT--AACTCAATGCAATTTTACAAGAGGTCGCAAGT-------------TCGCAAGAATTCTAAATTTCCA----AT
droEre2 scaffold_4820:7162031-7162116 + ATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCCACTG--ATCCATTGATTATTGGTTTTCAGGCTTGGGTTTCAATGTAATGGGAGGCAAGGAGCAAAATTCGCCCATCTAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CGAA---------ACACATAACACAAGTGAAGAGACAACAAGTGT--TCTGTTCAGTGAGACACCGTGTCTGCGTGGTCTCTTTCTGTTTTGTCAGTGAC-------------GAGACAGTAAAGGGAAAAAGTGGTGACCGTTGTTTGCGAACTATGATATA----TATTCGAC------TTTACCACATATTAAACCATGTAAGCAACTA--AACTGGTCTTAATTCTTTTACAGGACTTGGTTTCAACGTAATGGGTGGCAAGGAACAAAATTCTCCAATTTATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................TGTTTTGTCAGTGAC-------------GAGAC.........................................................................................................................................................................2052.601301200100000
.....................................................................................TGTTTTGTCAGTGAC-------------GAGACAG.......................................................................................................................................................................2252.00100900100000
..............................................................................................................................................................................................................................TTAATTCTTTTACAGGACTTGGTT.........................................2412.0020000000020
.....................................................................................TGTTTTGTCAGTGAC-------------GAGACA........................................................................................................................................................................2151.6080700001000
.....................................................................................TGTTTTGTCAGTGAC-------------GAGA..........................................................................................................................................................................1961.0060600000000
........................................................................................................................................TGACCGTTGTTTGCGAAA.....................................................................................................................................1811.0010100000000
.....................................................................................................................................................................................................................................................TTCAACGTAATGGGTGGCAAGGA...................2311.0010000000010
...........................................................................................................................................................................................................................................................GTAATGGGTGGCAAGGAACA................2011.0010100000000
....................................................................................................................................................................................................................................................TTTCAACGTAATGGGTGGCAAGGA...................2411.0010100000000
................CATAACACAAGTGAAGAGACATT........................................................................................................................................................................................................................................................2320.5010100000000
..AA---------ACACATAACACAAGTGAAGAGACA..........................................................................................................................................................................................................................................................2620.5010100000000
.....................................................................................TGTTTTGTCAGTGAC-------------GAGACAGA......................................................................................................................................................................2350.4020200000000
......................................................................................GTTTTGTCAGTGAC-------------GAGAC.........................................................................................................................................................................19170.3560600000000
...................AACACAAGTGAAGAGACA..........................................................................................................................................................................................................................................................1840.2510000010000
......................................................................................GTTTTGTCAGTGAC-------------GAGACA........................................................................................................................................................................20170.2440400000000
....................................................................................CTGTTTTGTCAGTGAC-------------GAGAC.........................................................................................................................................................................2150.2010010000000
.....................................................................................TGTTTTGTCAGTGAC-------------GAGAA.........................................................................................................................................................................2060.1710100000000
.....................................................................................TGTTTTGTCAGTGAC-------------GAGACAAA......................................................................................................................................................................2360.1710100000000
......................................................................................GTTTTGTCAGTGAC-------------GAGACAG.......................................................................................................................................................................21160.1320200000000
......................................................................................GTTTTGTCAGTGAC-------------GAGACAGA......................................................................................................................................................................22160.1320200000000
......................................................................................GTTTTGTCAGTGAC-------------GAGA..........................................................................................................................................................................18180.1120200000000
......................................................................................GTTTTGTCAGTGAC-------------GAGACAA.......................................................................................................................................................................21170.0610100000000
.......................................................................................TTTTGTCAGTGAC-------------GAGAC.........................................................................................................................................................................18170.0610100000000
......................................................................................GTTTTGTCAGTGAC-------------GAGAA.........................................................................................................................................................................19190.0510100000000
droPer2
CGAA---------ACACATAACACAAGTGAAGAGACAAAAAGTGT--TCTGTTCAGTGAGACACCGTGTCTGCGTGGTCTTTTTCTGTTTCATCAGTGAC-------------GAGACAGTACAGGGAAAAAGTGGTGACCGTTGTTTGCGAACTATGATATA----TATTCGAC------TTTACCACATATTAAACCATGCAAGCAACTA--AACTGGTCTTAATTCTTTTACAGGTCTGGGTTTCAACGTAATGGGTGGCAAGGAACAAAATTCTCCAATTTATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................CAACGTAATGGGTGGCAAGGAAC.................2312.002200000
........................................................................................................................................................................................................................................................AACGTAATGGGTGGCAAGGAACAAAA.............2611.001000001
..........................................................................................................................................................................................................................................................CGTAATGGGTGGCAAGGAA..................1911.001000001
.GAA---------ACACATAACACAAGTGAAGAGA............................................................................................................................................................................................................................................................2521.002020000
droWil2
AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTTTACAGGTCTAGGTTTCAACGTTATGGGAGGCAAGGAGCAGAATTCTCCCATTTATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................GGTTTCAACGTTATGGGA...........................1811.00100010
.................................................................................................................................................................................................................................................AGGTTTCAACGTTATGGGAGGC........................2211.00100001
.............................................................................................................................................................................................................................................GTCTAGGTTTCAACGTTATGGGA...........................2311.00100010
droVir3
CGA----------ACAGAGTACACAAGCACAACGAAAAAAAGTGT--TCTATGGATAGCGAAACCGAATCTGCTTCGTTTTTTGCGGTTTT-TTTGTGTG-------------CAGATCGCATTGAAAATAAGTGTTGACTGTTATTTTCGACCTCTACTA------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................TGTTGACTGTTATTTTCGACCTCTAC................................................................................................................................2611.001000000000000000000000000100000000000000000000000000000000000000
droMoj3
AAAA---------A-------------------------------------------------CAGTTTCTGTCTGAGTTTTTTTGACTGTGTCAGTGAAAGACACTTTTTTGCAG-----ACAATGAAAAAGTGTTAACAGTTATTTGCGAGCTATGGT-------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................TTAACAGTTATTTGCGAGCTATGGT-------------------------------------------------------------------------------------------------------------------------------25160.132200000
.......................................................................................................................................TTAACAGTTATTTGCGAGCTATG.................................................................................................................................23200.102200000
...................................................................TTCTGTCTGAGTTTTTTTGACTGTGTCAG...............................................................................................................................................................................................29200.102200000
.............................................................................................................................................GTTATTTGCGAGCTATGGT-------------------------------------------------------------------------------------------------------------------------------19190.051000001
................................................................................................TGAAAGACACTTTTTTGCAG-----......................................................................................................................................................................20200.051100000
.................................................................................TTTTGACTGTGTCAGTGAAA..........................................................................................................................................................................................20200.051100000
................................................................................................................................AAAAGTGTTAACAGTTATTTGCGAGC.....................................................................................................................................26200.051010000
.......................................................................................................................................TTAACAGTTATTTGCGAGCTA...................................................................................................................................21200.051010000
.......................................................................................................................................TTAACAGTTATTTGCGAGCTATGG................................................................................................................................24200.051000001
droGri2
TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAGGACTGGGTTTCAATGTTATGGGTGGCAAGGAGCAGAATTCTCCAATCTATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
CGAA----------------------ACAAAACGAAACAAAGTCT--ACTGCTCAGAGAGAGACCGAAACGGCATGTTTTTTTTCGGTTGCTCTCGCGAC-------------CAGAGCGTAAGCAAAAAAACGGTTAACAGTTATTTGCAAGCTATGCTTA-----TATCTAAT------TTTA-TACATGT---------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................TCAGAGAGAGACCGAAACGGCATG...................................................................................................................................................................................................................2411.001010000
.....................................CAAAGTCT--ACTGCTCAGAGAGAGA................................................................................................................................................................................................................................2411.001100000
................................................................................................................................AAAACGGTTAACAGTTATTTGCAAGC.....................................................................................................................................26200.102020000
..............................................................................TTTTTTCGGTTGCTCTCGCG.............................................................................................................................................................................................20200.051100000
droBip1
A------------ACAGAAAATCGAAACAAAAAGAAACAAAGTCT--GCTGCTTAGAGAGAAACCGAAACGGCATGCTTTTTTTCGGTTGTTCTCGCGAA-------------CAGAGCGTAAGGAAAAAAACGGTTAACAGTTATTTGCAAGCTATGTTTAAAATAT----------------------------AATATGTAAGTAAATATAGATTGATTT------------------GTATGATAATGTAGTAGTTGG-----------------------TTSizeHit CountTotal NormTotal
No Reads
droKik1
CAA----------ACTGAAAACCAAAGCAAAGAGAGACGACGTCG--GCTGTTAAGAGCGAGAGCGAAGATTCATTATTTTTTTCTGTTTTTCGCACGAG-------------TAGAGCGTAGGGGAAAAAACTTTTAACAGTTATTTGCAAGCTATGGTTTT---------------------AATACATTTAAAAACAAACA-----------------------------------------------------------------------------AACAACSizeHit CountTotal NormTotal
No Reads
droFic1
CGAAAAGTGCTCAACAGAAAACACAAATGACGACAGCAAGGGGCT--CTTGCTCAGAGCGAGAGCGAGACAGTATGAACTTTTTCGGTTGTGCTCGCACC-------------CAGAGCACTAGATGAAAAACGATCAACTGTTATTTGCGAGCTCTGATTAGAATGTATTCATTTAGACGTATGTTATGAATGTAATCATGCAGACGTCTA--GTCTGGAGTTA--------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CGAA---------------AACCATAACAAAGAGAAACTAAGTGT--TCTGCTCAGAGCGAAAGCAAGCGTGCAAGAT-TTTTTCTAATGTTTAAGTGCA-------------GAGACCGTAAAGCGAAAAACGGTTGACAGTTATTTGCGAGCTTTGGTAAA----TAC-------------------------------------------------------------------------------------------------------------------TCSizeHit CountTotal NormTotal
No Reads
droRho1
A------------ACAGAAAACATAAATGAAGACAGCAAGAGTCT--CTTGCTCAGAGCGAGAGCGAGACAGTATGAACTTTTTCGGTTGTGCTCGCAAC-------------GAGAGCGCAGGAAGAAAAACGGTCAACAGGTATTTGCGAGCTATGATTG------------------------------------------------------------------------------------------------------------------TTTTACTTAACSizeHit CountTotal NormTotal
No Reads
droBia1
TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTCCAGGCTTAGGTTTCAATGTGATGGGAGGCAAGGAGCAGAATTCGCCCATCTATSizeHit CountTotal NormTotal
No Reads
droTak1
GTCA---------ACAGAAAACACTTTAAAAGAAAAAATAACTGTTTTCTG-TCCGAGACTGACAGAAAATTTT-AGATTTTTTCTGTTTTGTGAGTAAC-------------AAGACAGTTTCAGAAATAAGTGTTAACAGTTATTTACGAGCTCTGATATA----ACATTAAC------TTCCTGAC--ATTAA----------------------------------------------------------------------------------ATTACTTAASizeHit CountTotal NormTotal
No Reads
droEug1
TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTCAGGCCTAGGTTTCAACGTAATGGGAGGCAAGGAGCAAAATTCACCCATCTATSizeHit CountTotal NormTotal
No Reads
dm3
TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTTCAGGCTTGGGTTTCAATGTAATGGGGGGCAAGGAGCAAAACTCGCCCATCTATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................TTTCAATGTAATGGGGGGCAAG.....................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................AATGTAATGGGGGGCAAGGAGC.................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................AAGGAGCAAAACTCGCCC......1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................GGGTTTCAATGTAATGGGGGG.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................GTTTCAATGTAATGGGGGG.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................................................................................GTTTCAATGTAATGGGGGGC........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TGGGGGGCAAGGAGCAAAACTCGCCCA.....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TGGGTTTCAATGTAATGGGGG..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TGGGTTTCAATGTAATGGGGGGCA.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................TTGGGTTTCAATGTAATGGGG...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TTCAGGCTTGGGTTTCAATG...................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................GGGGGGCAAGGAGCAAAAC............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.............................................................................................................................................................................................................................................................AATGGGGGGCAAGGAGCAAA..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................AATGGGGGGCAAGGAGCA................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TGGGTTTCAATGTAATGGGGGGCAAGGAG..................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................AATGTAATGGGGGGCAAGGAG..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................GCTTGGGTTTCAATGTGT................................18100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT---CTATTTTTTAGGCTTGGGCTTCAATGTAATGGGAGGCAAGGAGCAAAACTCGCCCATCTATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGGCTTGGGCTTCAATGTAATGGGAGGCAAGGAGCAAAACTCGCCCATCTATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CGAA---------------AACCAAAACAAAGAGAAACGAAAAGT--TCTGTTCAGAGCGAGAGCACACGCGCATCGCCTTTTTCGGTTGTGTTCGAGTG-------------CAGACCGCAAAACGAAAAACGGTTGACAGTTATTTGCGAGCTATGATAAG----TAT-----------------ACATAGGTAGACACACGAGGAACTT--AACTCAATGCAATTTTACAAGAGGTCGCAAGT-------------TCGCAAGAATTCTAAATTTCCA----ATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................TACAAGAGGTCGCAAGT-------------TCGCAAGAAT..................27260.50121028461501230008
.....................................................................................................................................................................................................................................TACAAGAGGTCGCAAGT-------------TCGCAAGAA...................26235.50710234900290006
.........................................................................................................................................................................T-----------------ACATAGGTAGACACACGAGGAACT............................................................................25234.5069095710020000
.......................................................................................................................................................................TAT-----------------ACATAGGTAGACACACGAGGAACT............................................................................27219.0038082900000001
.....................................................................................................................................................................................................................................TACAAGAGGTCGCAAGT-------------TCGCAAGA....................25217.0034172900300012
..................................................................................................................................................................................................................................TTTTACAAGAGGTCGCAAGT-------------TCGCA.......................2529.0018012410010000
..............................................................................................................................................................................................TAGGTAGACACACGAGGAACTT--AACT.....................................................................2629.0018021600000000
..............................AGAGAAACGAAAAGT--TCTGTTCAGAGC....................................................................................................................................................................................................................................27127.58910868000100014
.........................................................................................................................................................................T-----------------ACATAGGTAGACACACGAGGAACC............................................................................2526.5013001300000000
..............................................................AGCACACGCGCATCGCCTTTTTCGGTT......................................................................................................................................................................................................2735.6717000000000017
...............................................................................................................................................................TAAG----TAT-----------------ACATAGGTAGACACACGAGG................................................................................2725.001004600000000
.......................................................................................................................................TTGACAGTTATTTGCGAGCTATGATA..............................................................................................................................2624.50907000020000
.......................................................................................................................................................................TAT-----------------ACATAGGTAGACACACGAGGAACC............................................................................2724.00800800000000
.......................................................................................................................................................................TAT-----------------ACATAGGTAGACACACGAGGAAC.............................................................................2623.50702500000000
........................................................................................................................................TGACAGTTATTTGCGAGCTATGATA..............................................................................................................................2523.50706010000000
......................................................................................................................................................................................................................................ACAAGAGGTCGCAAGT-------------TCGCAAGAAT..................2623.50707000000000
..............................................................................................................................................................................................TAGGTAGACACACGAGGAACTT--AAC......................................................................2523.00600600000000
.....................................................................................................................................................................................................................................TACAAGAGGTCGCAAGT-------------TCGCAAG.....................2423.00603000030000
.......................................................................................................................................TTGACAGTTATTTGCGAGCTATGA................................................................................................................................2443.001207121010000
.......................................................................................................................................TTGACAGTTATTTGCGAGCTATGAT...............................................................................................................................2542.501004200010003
.................................................................................................................................................................AG----TAT-----------------ACATAGGTAGACACACGAGG................................................................................2522.50503020000000
...............................GAGAAACGAAAAGT--TCTGTTCAGAGC....................................................................................................................................................................................................................................26122.0825019000000015
..............................................................AGCACACGCGCATCGCCTTTTTCGGTTG.....................................................................................................................................................................................................2832.00605100000000
..............................................................................................................................................................................................TAGGTAGACACACGAGGAACTT--AACTC....................................................................2722.00402200000000
.....................................................................................................................................................................................................................................TACAAGAGGTCGCAAGT-------------TCGCAAGAAA..................2722.00401000000003
.........................................................................................................................................................................T-----------------ACATAGGTAGACACACGAGGAACTT--.........................................................................2622.00402200000000
..................................................................................................................................................................................................................................TTTTACAAGAGGTCGCAAGT-------------TCGCAAG.....................2722.00402100010000
................................................................................................................................AAAACGGTTGACAGTTATTTGCGAT......................................................................................................................................2591.5614000000000014
................................................................................................................................................................................................................................................GCAAGT-------------TCGCAAGAAT..................1621.50300000000003
.....................................................................................................................................................................................................................................TACAAGAGGTCGCAAGT-------------TCGCA.......................2221.50302010000000
.......................................................................................................................................TTGACAGTTATTTGCGAGCTATGATAAG----........................................................................................................................2821.50302000010000
......................................................................................................................................................................................................CACACGAGGAACTT--AACTCAATGC...............................................................2421.50303000000000
.....................................................................................................................................................................................................................................TACAAGAGGTCGCAAGT-------------TCGCAAGAATT.................2821.50301200000000
.....................................................................................................................................................................................................................................TACAAGAGGTCGCAAGT-------------TCGCAAGAATTC................2921.50300300000000
..................................................................................................................................................................................................................................TTTTACAAGAGGTCGCAAGT-------------TCGC........................2421.50302000010000
...................................................................................................................................................................................................................................TTTACAAGAGGTCGCAAGT-------------TCGCAAGAA...................2821.50302000010000
..........................................................................TCGCCTTTTTCGGTTGTGTTCGAGTG-------------C.............................................................................................................................................................................2731.33400310000000
....................................................TCAGAGCGAGAGCACACGCGCATCGCC................................................................................................................................................................................................................2731.00301200000000
............................................................................................................................................................TGATAAG----TAT-----------------ACATAGGTAGACACACG...................................................................................2721.00202000000000
...................................................................................................................................................................................................................................TTTACAAGAGGTCGCAAGT-------------TCGCA.......................2421.00202000000000
..........................................................CGAGAGCACACGCGCATCGCCTTTT............................................................................................................................................................................................................2531.00303000000000
......................................................................................................................................................................................................CACACGAGGAACTT--AACTCAATGCA..............................................................2521.00202000000000
...................................................................................................................................................................................................................................TTTACAAGAGGTCGCAAGT-------------TCGCAAG.....................2621.00202000000000
..................................................................................................................................................................................................TAGACACACGAGGAACTT--AACTCAA..................................................................2521.00202000000000
......................................................................................................................................................................................................CACACGAGGAACTT--AACTCAATGCAAT............................................................2721.00200200000000
............................................................AGAGCACACGCGCATCGCCTTTTTCGGT.......................................................................................................................................................................................................2831.00303000000000
..............................................................AGCACACGCGCATCGCCTTTTTCGG........................................................................................................................................................................................................2531.00300210000000
...................................................................................................................................................................................................................................TTTACAAGAGGTCGCAAGT-------------TCGCAAGA....................2721.00200010010000
........................................................................................................................................................................................................CACGAGGAACTT--AACTCAATGCAAT............................................................2521.00201100000000
......................................................................................................................................................................................................................................ACAAGAGGTCGCAAGT-------------TCGCAAGA....................2421.00200000000002
.........................................................................................................................................GACAGTTATTTGCGAGCTATGATAAG----........................................................................................................................2621.00202000000000
...........................CAAAGAGAAACGAAAAGT--TCTGTT..........................................................................................................................................................................................................................................24120.67800800000000
............................................................AGAGCACACGCGCATCGCCTTTTTCGG........................................................................................................................................................................................................2730.67201010000000
..............................................................AGCACACGCGCATCGCCTTTTTCGGT.......................................................................................................................................................................................................2630.67202000000000
...................................................TTCAGAGCGAGAGCACACGCGCATCGCC................................................................................................................................................................................................................2830.67201100000000
..................................................................CACGCGCATCGCCTTTTTCGGTTGTGT..................................................................................................................................................................................................2730.67201100000000
.......................................................................................................................................TTGACAGTTATTTGCGAGCTATG.................................................................................................................................23100.60604200000000
..............................AGAGAAACGAAAAGT--TCTGTTCAGAG.....................................................................................................................................................................................................................................26120.58704300000000
.....................................................................................................................................................................................................................................TACAAGAGGTCGCAAGT-------------TCGCAAGAT...................2620.50100010000000
..............................AGAGAAACGAAAAGT--TCTGTTCAGA......................................................................................................................................................................................................................................25120.50602000000004
........................................................................................................................................................................AT-----------------ACATAGGTAGACACACGAGG................................................................................2220.50100100000000
..................................................................................................................................................................G----TAT-----------------ACATAGGTAGACACACGAC.................................................................................2320.50100100000000
....................................................................................................................................................................................................................................TTACAAGAGGTCGCAAGT-------------TCGCAAGAA...................2720.50101000000000
.........................................................................................................................................................................T-----------------ACATAGGTAGACACACGAGGAACTT--AAC......................................................................2920.50100100000000
.....................................................................................................................................................................................................ACACACGAGGAACTT--AACTCAATGCAA.............................................................2720.50100100000000
.....................................................................................................................................................................................................................................TACAAGAGGTCGCAAGT-------------TCGC........................2120.50101000000000
.....................................................................................................................................................................................................................................................T-------------TCGCAAGAATTCTAAATTTCCA----A.2420.50101000000000
......................................................................................................................................................................................................CACACGAGGAACTT--AACTCAATGCAATTT..........................................................2920.50100100000000
........................................................................................................................................TGACAGTTATTTGCGAGCTATGATAA.............................................................................................................................2620.50101000000000
............................................................................................................................................................................................CATAGGTAGACACACGAGGAACTT--AAC......................................................................2720.50100100000000
...............................................TCTGTTCAGAGCGAGAGCACACGCGCA.....................................................................................................................................................................................................................2740.50202000000000
.........................................................................................................................................GACAGTTATTTGCGAGCTATGATAA.............................................................................................................................2520.50101000000000
........................................................................................................................................TGACAGTTATTTGCGAGCTATGATAAG----........................................................................................................................2720.50101000000000
...................................................TTCAGAGCGAGAGCACACGCGCATCG..................................................................................................................................................................................................................2640.50200200000000
..............................................................................................................................................................................................................................................TCGCAAGT-------------TCGCAAGAATTCTAAATT..........2620.50101000000000
...............................................................................................................................................TATTTGCGAGCTATGATAAG----TAT-----------------ACA.................................................................................................2620.50101000000000
.....................................................................................................................................................................................................................................................T-------------TCGCAAGAATTCTAAATTTCCA----AT2520.50100100000000
.................................................................................................................................................................AG----TAT-----------------ACATAGGTAGACACACGAGGAAC.............................................................................2820.50100100000000
............................................................................................................................................................................................CATAGGTAGACACACGAGGAACT............................................................................2320.50101000000000
.........................................................................................................................................................................T-----------------ACATAGGTAGACACACGAGGA...............................................................................2220.50100100000000
..................................................................................................................................................................G----TAT-----------------ACATAGGTAGACACACGAGGAAC.............................................................................2720.50100100000000
...................................................................................................................................................................................................................T--AACTCAATGCAATTTTACAAGAGGT................................................2620.50100100000000
................................................................................................................................................................................................GGTAGACACACGAGGAACTT--AACTCAA..................................................................2720.50101000000000
............................................................................................................................................................TGATAAG----TAT-----------------ACATAGGTAGACACACGA..................................................................................2820.50101000000000
............................................................................................................................................AGTTATTTGCGAGCTATGATAAG----TA......................................................................................................................2520.50101000000000
..................................................................................................................................................................................................TAGACACACGAGGAACTT--AACT.....................................................................2220.50100100000000
.................................................................................................................................................................AG----TAT-----------------ACATAGGTAGACACACGAGGAACT............................................................................2920.50100100000000
.....................................................................................................................................................................................................................................TACAAGAGGTCGCAAGT-------------TCGCAAGAAC..................2720.50100100000000
...................................................................................................................................................................................................AGACACACGAGGAACTT--AACTCAATGC...............................................................2720.50101000000000
.............................................................................................................................................................................................................................TGCAATTTTACAAGAGGTCGCAAG..........................................2420.50101000000000
...................................................................................................................................................................................................................................TTTACAAGAGGTCGCAAGT-------------TCGCAAGAAT..................2920.50100100000000
......................................................................................................................................................................................................CACACGAGGAACTT--AACTCAATGCTT.............................................................2620.50100100000000
..............................................................................................................................................................................................TAGGTAGACACACGAGGAACTT--AACTCA...................................................................2820.50101000000000
..........................................................................................................................................................TATGATAAG----TAT-----------------ACATAGGTAGACA.......................................................................................2520.50100100000000
.......................................................................................................................................................................................................................ACTCAATGCAATTTTACAAGAGGTCGCA............................................2820.50101000000000
.................................................................................................................................................................AG----TAT-----------------ACATAGGTAGACACACGAGGAACC............................................................................2920.50100100000000
...........................................................................................................................................................ATGATAAG----TAT-----------------ACATAGGTAGACACA.....................................................................................2620.50101000000000
....................................................................................................................................................................................................................................TTACAAGAGGTCGCAAGT-------------TCGCAAGAAT..................2820.50100000010000
..............................................................................................................................................................................................TAGGTAGACACACGAGGAACT............................................................................2120.50100100000000
........................................................................................................................................................................AT-----------------ACATAGGTAGACACACGAGGAACT............................................................................2620.50101000000000
.....................................................................................................................................................................................................................................TACAAGAGGTCGCAAGT-------------TCGCAAGAC...................2620.50100100000000
.........................................................................................................................................................................T-----------------ACATAGGTAGACACACGAGGAA..............................................................................2320.50100100000000
...........................................................................................................................................................ATGATAAG----TAT-----------------ACATAGGTAGACA.......................................................................................2420.50101000000000
................................................................................................................................................................................................GGTAGACACACGAGGAACTT--AAC......................................................................2320.50101000000000
...............................................................................................................................................................................................................................................CGCAAGT-------------TCGCAAGAATTCTAAATT..........2520.50100100000000
.........................................................................................................................................................................T-----------------ACATAGGTAGACACACGAGGAACG............................................................................2520.50100100000000
.................................................................................................................................................TTTGCGAGCTATGATAAG----TAT-----------------ACATA...............................................................................................2620.50101000000000
.............................................................................................................................................GTTATTTGCGAGCTATGATAA.............................................................................................................................2120.50101000000000
......................................................................................................................................................................................................CACACGAGGAACTT--AACTCAAA.................................................................2220.50100100000000
......................................................................................................................................................................................................................AACTCAATGCAATTTTACAAGAGGTC...............................................2620.50101000000000
........................................................................................................................................................................AT-----------------ACATAGGTAGACACACGAGGAACTT--.........................................................................2720.50101000000000
...............................................................................................................................................................................................................AACTT--AACTCAATGCAATTTTACAAG....................................................2620.50101000000000
..................................................................................................................................................................................................TAGACACACGAGGAACTT--AACTCAATG................................................................2720.50100100000000
......................................................................................................................................................................................................................................ACAAGAGGTCGCAAGT-------------TCGCAAGAA...................2520.50101000000000
................................................................................................................................................................AAG----TAT-----------------ACATAGGTAGACACACGAGG................................................................................2620.50101000000000
...................................................................................................................................................................................................AGACACACGAGGAACTT--AACTCAATG................................................................2620.50101000000000
.........................................................................................................................................GACAGTTATTTGCGAGCTATGATAAG----T.......................................................................................................................2720.50100000010000
....................................................................................................................................................................................................GACACACGAGGAACTT--AACTCAATGCA..............................................................2720.50101000000000
...............................................................................................................................................TATTTGCGAGCTATGATAAG----TAT-----------------ACATA...............................................................................................2820.50101000000000
...............................................................................................................................................................................................................................CAATTTTACAAGAGGTCGCAAGT-------------TCGCA.......................2820.50101000000000
..................................................................................................................................................................................................................................TTTTACAAGAGGTCGCAAGT-------------TCGCAA......................2620.50101000000000
.............................................................GAGCACACGCGCATCGCCTTTTTCGGTT......................................................................................................................................................................................................2830.33100100000000
....................................................................CGCGCATCGCCTTTTTCGGTTG.....................................................................................................................................................................................................2230.33100100000000
..........................................................................TCGCCTTTTTCGGTTGTGTTCGAGT............................................................................................................................................................................................2530.33100100000000
..........................................................CGAGAGCACACGCGCATCGCCTT..............................................................................................................................................................................................................2330.33101000000000
............................................................................GCCTTTTTCGGTTGTGTTCGAGTG-------------C.............................................................................................................................................................................2530.33100100000000
..........................................................................TCGCCTTTTTCGGTTGTGTTCGAG.............................................................................................................................................................................................2430.33101000000000
............................................................................GCCTTTTTCGGTTGTGTTCGAGTG-------------CA............................................................................................................................................................................2630.33101000000000
.............................................................GAGCACACGCGCATCGCCTTTTTCGG........................................................................................................................................................................................................2630.33101000000000
............................................................AGAGCACACGCGCATCGCCTTTTTC..........................................................................................................................................................................................................2530.33100100000000
..................................................................CACGCGCATCGCCTTTTTCGGTTGT....................................................................................................................................................................................................2530.33100100000000
............................................................AGAGCACACGCGCATCGCCTTTTTCG.........................................................................................................................................................................................................2630.33101000000000
...............................................................GCACACGCGCATCGCCTTTTTCGGTTG.....................................................................................................................................................................................................2730.33100100000000
.........................................AAGT--TCTGTTCAGAGCGAGAGCACA...........................................................................................................................................................................................................................25110.27300210000000
....................................................TCAGAGCGAGAGCACACGCGCATCG..................................................................................................................................................................................................................2540.25100010000000
........................................................................................................................................TGACAGTTATTTGCGAGCTATGA................................................................................................................................2340.25101000000000
............................................T--TCTGTTCAGAGCGAGAGCACACGCGCA.....................................................................................................................................................................................................................2840.25101000000000
.................................................TGTTCAGAGCGAGAGCACACGCGCATC...................................................................................................................................................................................................................2740.25101000000000
...............................................TCTGTTCAGAGCGAGAGCACACGCGCAT....................................................................................................................................................................................................................2840.25100100000000
...............................................TCTGTTCAGAGCGAGAGCACACGCGCATC...................................................................................................................................................................................................................2940.25100100000000
............................................................................................TTCGAGTG-------------CAGACCGCAAAACGA...............................................................................................................................................................2390.22202000000000
..................................................................................................................................AACGGTTGACAGTTATTTGCGAGC.....................................................................................................................................2490.22200200000000
........................................................................................TGTGTTCGAGTG-------------CAGACCGCAAAACG................................................................................................................................................................26100.20202000000000
.......................................................................................................................................TTGACAGTTATTTGCGAGCTA...................................................................................................................................21100.20201000010000
.................................................TGTTCAGAGCGAGAGCACACGCGCAT....................................................................................................................................................................................................................2650.20101000000000
............................................................................................TTCGAGTG-------------CAGACCGCAAAAC.................................................................................................................................................................21100.20202000000000
........................................................................................................................................TGACAGTTATTTGCGAGCTATG.................................................................................................................................22100.20202000000000
......................................................................................................................................GTTGACAGTTATTTG..........................................................................................................................................15120.17200000000002
..............................AGAGAAACGAAAAGT--TCTGTTCAGAGT....................................................................................................................................................................................................................................27120.17200100000001
...............................GAGAAACGAAAAGT--TCTGTTCAGAG.....................................................................................................................................................................................................................................25120.17201100000000
.........................AACAAAGAGAAACGAAAAGT--TCTGTT..........................................................................................................................................................................................................................................26120.17200200000000
.......................................................................................................................GCAAAACGAAAAACGGTTGACAGTTATT............................................................................................................................................2870.14101000000000
..................................................................................................TG-------------CAGACCGCAAAACGAAAAACGG........................................................................................................................................................2480.13101000000000
..........................................................................................................................AAACGAAAAACGGTTGACAGTTATTT...........................................................................................................................................2680.13100100000000
.................................................................................................................................AAACGGTTGACAGTTATTTGCGAGC.....................................................................................................................................2590.11100100000000
..........................................................................................TGTTCGAGTG-------------CAGACCGCAAAACGA...............................................................................................................................................................2590.11101000000000
................................................................................................................................AAAACGGTTGACAGTTATTTGCGGT......................................................................................................................................2590.11100000000001
.................................................................................................................................AAACGGTTGACAGTTATTTGCGAGCT....................................................................................................................................2690.11100100000000
...............................................................................TTTTTCGGTTGTGTTCGAGTG-------------CAGAC.........................................................................................................................................................................26100.10100100000000
...................................................................................................................................ACGGTTGACAGTTATTTGCGAGC.....................................................................................................................................23100.10100100000000
.................................................................................TTTCGGTTGTGTTCGAGTG-------------CAGACC........................................................................................................................................................................25100.10100100000000
...............................................................................TTTTTCGGTTGTGTTCGAGTG-------------CAG...........................................................................................................................................................................24100.10101000000000
.......................................................................................................................................TTGACAGTTATTTGCGAGCTAT..................................................................................................................................22100.10101000000000
.......................................................................................................................................TTGACAGTTATTTGCGAGCT....................................................................................................................................20100.10101000000000
.............................................................................................TCGAGTG-------------CAGACCGCAAAACG................................................................................................................................................................21100.10101000000000
...................................................................................................................................ACGGTTGACAGTTATTTGCGAG......................................................................................................................................22100.10100000010000
................................................................................TTTTCGGTTGTGTTCGAGTG-------------CAGA..........................................................................................................................................................................24100.10100100000000
........................................................................................TGTGTTCGAGTG-------------CAGACCGCAAAAC.................................................................................................................................................................25100.10100100000000
................................................................................TTTTCGGTTGTGTTCGAGTG-------------CAGACC........................................................................................................................................................................26100.10100100000000
............................................................................................TTCGAGTG-------------CAGACCGCAAAACA................................................................................................................................................................22100.10101000000000
........................................................................................................................................TGACAGTTATTTGCGAGCT....................................................................................................................................19100.10100100000000
..........................................AGT--TCTGTTCAGAGCGAGAGCACA...........................................................................................................................................................................................................................24110.09101000000000
........................................AAAGT--TCTGTTCAGAGCGAGAGCACACG.........................................................................................................................................................................................................................28110.09101000000000
............................................T--TCTGTTCAGAGCGAGAGCACACG.........................................................................................................................................................................................................................24110.09100100000000
..................................................................................TTCGGTTGTGTTCGAGTG-------------CAGA..........................................................................................................................................................................22110.09100100000000
...............................GAGAAACGAAAAGT--TCTGTTCAGAGCGA..................................................................................................................................................................................................................................28120.08100100000000
........................................AAAGT--TCTGTTCAGAGCGAGAGCAC............................................................................................................................................................................................................................25120.08100100000000
..........................ACAAAGAGAAACGAAAAGT--TCTGTT..........................................................................................................................................................................................................................................25120.08100100000000
...................AACCAAAACAAAGAGAAACGAAAAGT--T...............................................................................................................................................................................................................................................27120.08101000000000
..............................AGAGAAACGAAAAGT--TCTGTTCAGACT....................................................................................................................................................................................................................................27120.08100100000000
.............................AAGAGAAACGAAAAGT--TCTGTTCAGAGC....................................................................................................................................................................................................................................28120.08100100000000
...............................GAGAAACGAAAAGT--TCTGTTCAGAGCG...................................................................................................................................................................................................................................27120.08101000000000
...............................GAGAAACGAAAAGT--TCTGTTCAGA......................................................................................................................................................................................................................................24120.08101000000000
..............................AGAGAAACGAAAAGT--TCTGTTCAG.......................................................................................................................................................................................................................................24130.08100100000000
.....................................CGAAAAGT--TCTGTTCAGAGC....................................................................................................................................................................................................................................20130.08101000000000
..................................AAACGAAAAGT--TCTGTTCAGAGC....................................................................................................................................................................................................................................23130.08101000000000
droEre2
ATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCCACTG--ATCCATTGATTATTGGTTTTCAGGCTTGGGTTTCAATGTAATGGGAGGCAAGGAGCAAAATTCGCCCATCTATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................TTTCAATGTAATGGGAGGC........................1911.0010100000
..............................................................................................................................................................................................................................................................ATGGGAGGCAAGGAGCAAAATT...........2211.0010000100

Generated: 05/17/2015 at 10:53 PM