ID:

dps_624

 Coordinate:

2:18149746-18149896 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.7 -22.6 -22.6

Flybase annnotation

CDS [Dpse\GA20509-cds]; exon [Dpse\GA20509:1]; intron [Dpse\GA20509-in]

No Repeatable elements found

mature
  1. Unknown_group_84:13585-13607 -
  2. Unknown_group_383:5351-5373 -
  3. Unknown_group_302:7055-7077 -
  4. Unknown_group_444:64-86 -
  5. dps_624  2:18149859-18149881 -
  6. Unknown_group_156:53429-53451 -
  7. Unknown_group_186:9221-9243 -
  8. 4_group2:969547-969569 -
  9. 4_group4:5916992-5917014 -
  10. Unknown_group_630:1654-1676 -
  11. Unknown_group_254:21468-21490 -
  12. Unknown_group_57:1042-1064 -
  13. Unknown_singleton_1489:46-68 -
  14. Unknown_singleton_3597:2579-2601 -
  15. Unknown_group_195:14433-14455 -
  16. Unknown_singleton_1104:1159-1181 -
  17. Unknown_singleton_3236:945-967 -
  18. Unknown_singleton_1209:68-90 -
  19. Unknown_singleton_3485:2376-2398 -
  20. Unknown_singleton_1622:2476-2498 -
  21. Unknown_group_5:3015-3037 +
  22. Unknown_singleton_1179:2178-2200 +
  23. Unknown_singleton_879:11757-11779 +
  24. Unknown_singleton_1629:2070-2092 +
  25. Unknown_group_277:3521-3543 +
  26. Unknown_group_19:41005-41027 +
  27. Unknown_group_50:8001-8023 +
  28. Unknown_group_194:19287-19309 +
  29. Unknown_group_194:22267-22289 +
  30. Unknown_singleton_3872:4756-4778 +
  31. Unknown_group_198:15075-15097 +
  32. Unknown_singleton_125:2006-2028 +
  33. Unknown_group_844:3432-3454 +
  34. Unknown_singleton_520:2668-2690 +
  35. Unknown_group_712:4880-4902 +
  36. Unknown_singleton_756:68-90 +
  37. Unknown_group_311:7630-7652 +
  38. Unknown_singleton_388:525-547 +
  39. Unknown_singleton_4:1539-1561 +
  40. Unknown_singleton_104:1621-1643 +
  41. Unknown_group_18:1338-1360 +
  42. dps_1746  Unknown_group_11:1888-1910 +
  43. dps_1857  Unknown_group_204:13962-13984 +
  44. Unknown_group_665:2022-2044 +
  45. Unknown_singleton_3579:571-593 +
  46. Unknown_group_489:659-681 +
  47. Unknown_singleton_1249:1649-1671 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GGGCAACGACAGCTGCTGGCGATGCGGATTCGGTAGCCGAATTCATCGCTTCGGAGAACGTGCAGCCAAGTACGTCTGCAGCGTCCGTGTCCGTGGTGTCCGCATTTATCACATTCCTTTGATTATCTACGCTAACATTAGTACAACTGTGTTTTGTCATATTTCATAATGGCTTTCTAAAAAATTCAATTTTAATTTCAGTCGGTTGAAGGGGAAAACCATGAAAAGGCAGTTGAATTGCTAAAACAAGC
**************************************************..(((((((((((......))))))....(((((....(((.((((((........))))))........))).....)))))(((((.(((...))))))))..(((((........)))))))))).......................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 M059
embryo
 M062
head
 SRR902010
ovaries
 GSM343916
embryo
 V112
male body		 GSM444067
head
.................................................................CCAAGTACGTCTGCAGCGTCCGT................................................................................................................................................................... 23 0 20 12.20 244 244 0 0 0 0 0 0 0
.............TGCTGGCGATGCGGATTCGGTAG....................................................................................................................................................................................................................... 23 0 1 4.00 4 0 4 0 0 0 0 0 0
.................................................................CCAAGTACGTCTGCAGCGTCC..................................................................................................................................................................... 21 0 20 3.65 73 73 0 0 0 0 0 0 0
.................................................................CCAAGTACGTCTGCAGCGTCCGTGTCC............................................................................................................................................................... 27 0 20 2.40 48 48 0 0 0 0 0 0 0
.................................................................CCAAGTACGTCTGCAGCGTCCGTGTCCG.............................................................................................................................................................. 28 0 20 2.10 42 42 0 0 0 0 0 0 0
.........CAGCTGCTGGCGATGCGGATTCGG.......................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................................................TGTCCGTGGTGTCCGCAT.................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................GTTGAAGGGGAAAACCATGAAAA........................ 23 0 1 1.00 1 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................TTTTAATTTCAGTCGGTTGAAGGGG..................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................TGAAGGGGAAAACCATGAAAAGGC..................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0
.............TGCTGGCGATGCGGATTCGG.......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
............................TTCGGTAGCCGAATTCATCGCTTCGG..................................................................................................................................................................................................... 26 0 9 0.44 4 3 0 0 0 0 0 1 0
........................................ATTCATCGCTTCGGAGAACGTGCAG.......................................................................................................................................................................................... 25 0 8 0.38 3 0 3 0 0 0 0 0 0
.................................................................CCAAGTACGTCTGCAGCGTC...................................................................................................................................................................... 20 0 20 0.35 7 0 0 2 0 0 4 0 1
.....................................CGAATTCATCGCTTCGGAGAACGT.............................................................................................................................................................................................. 24 0 6 0.33 2 0 0 0 0 2 0 0 0
................TGGCGATGCGGATTCCGTA........................................................................................................................................................................................................................ 19 1 3 0.33 1 1 0 0 0 0 0 0 0
.............................................TCGCTTCGGAGAACGTGCAGC......................................................................................................................................................................................... 21 0 10 0.30 3 3 0 0 0 0 0 0 0
..................................AGCCGAATTCATCGCTTCGGAGAA................................................................................................................................................................................................. 24 0 11 0.27 3 0 3 0 0 0 0 0 0
............................TTCGGTAGCCGAATTCATCGCT......................................................................................................................................................................................................... 22 0 12 0.25 3 3 0 0 0 0 0 0 0
..............................................................CAGCCAAGTACGTCTGCAGCGTCC..................................................................................................................................................................... 24 0 20 0.25 5 5 0 0 0 0 0 0 0
.................................................................CCAAGTACGTCTGCAACGTCCGTG.................................................................................................................................................................. 24 1 20 0.25 5 5 0 0 0 0 0 0 0
.......................................AATTCATCGCTTCGGAGAACGTGC............................................................................................................................................................................................ 24 0 8 0.25 2 0 2 0 0 0 0 0 0
..........................................................................TCTGCAGCGTCCGTGTCCGTGG........................................................................................................................................................... 22 0 20 0.25 5 5 0 0 0 0 0 0 0
.............................................TCGCTTCGGAGAACGTGCAGCCAAG..................................................................................................................................................................................... 25 0 9 0.22 2 1 0 0 0 1 0 0 0
............................TTCGGTAGCCGACTTCATCGCTTCGG..................................................................................................................................................................................................... 26 1 9 0.22 2 2 0 0 0 0 0 0 0
................................................................................................................ATTGCTTTGAGTATCTACTC....................................................................................................................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0
.................................................................................CGTCCGTGTCCGTGGTGTCC...................................................................................................................................................... 20 0 20 0.20 4 4 0 0 0 0 0 0 0
..................................................................CAAGTACGTCTGCAGCGTC...................................................................................................................................................................... 19 0 20 0.20 4 4 0 0 0 0 0 0 0
...................................GCCGAATTCATCGCTTCGGAGAACG............................................................................................................................................................................................... 25 0 6 0.17 1 1 0 0 0 0 0 0 0
......................................................................TACGTCTGCAGCGTCCGTGTCCGT............................................................................................................................................................. 24 0 20 0.15 3 3 0 0 0 0 0 0 0
.................................................................CCAAGTACGTCTGCAGCGTCCA.................................................................................................................................................................... 22 1 20 0.15 3 3 0 0 0 0 0 0 0
..................................................................CAAGTACGTCTGCAGCGTCCGTGTC................................................................................................................................................................ 25 0 20 0.15 3 2 0 0 0 0 0 0 1
......................................GAATTCATCGCTTCGGAGAACGTGC............................................................................................................................................................................................ 25 0 8 0.13 1 0 1 0 0 0 0 0 0
.........................................TTCATCGCTTCGGAGAACG............................................................................................................................................................................................... 19 0 8 0.13 1 1 0 0 0 0 0 0 0
.......................................AATTCATCGCTTCGGAGAACGTGCAG.......................................................................................................................................................................................... 26 0 8 0.13 1 0 1 0 0 0 0 0 0
......................................GAATTCATCGCTTCGGAGAACGTG............................................................................................................................................................................................. 24 0 8 0.13 1 1 0 0 0 0 0 0 0
............................TTCGGTAGCCGAATTCATCGCTTCGGA.................................................................................................................................................................................................... 27 0 8 0.13 1 1 0 0 0 0 0 0 0
..........................................TCATCGCTTCGGAGAACGTGCAG.......................................................................................................................................................................................... 23 0 8 0.13 1 1 0 0 0 0 0 0 0
......................TGCGGATTCGGTTGCCGAATT................................................................................................................................................................................................................ 21 1 8 0.13 1 1 0 0 0 0 0 0 0
.....................................................................................................................................AACTTTATTACAACTGTGATT................................................................................................. 21 3 9 0.11 1 1 0 0 0 0 0 0 0
............................TTCGGTAGCCGACTTCATCGCTTCG...................................................................................................................................................................................................... 25 1 9 0.11 1 1 0 0 0 0 0 0 0
............................TTCGGTAGCCGAATTCATCACTTCGGA.................................................................................................................................................................................................... 27 1 9 0.11 1 1 0 0 0 0 0 0 0
.............................................TCGCTTCGGAGAACGTGCAGCC........................................................................................................................................................................................ 22 0 10 0.10 1 1 0 0 0 0 0 0 0
.............................TCGGTAGCCGAATTCATCACTTCGGAA................................................................................................................................................................................................... 27 2 10 0.10 1 1 0 0 0 0 0 0 0
..............................................................CAGCCAAGTACGTCTGCAGCGTC...................................................................................................................................................................... 23 0 20 0.10 2 0 0 0 0 0 2 0 0
..................................................................................GTCCGTGTCCGTGGTGTC....................................................................................................................................................... 18 0 20 0.10 2 2 0 0 0 0 0 0 0
.................................................................CCAAGTACGTCTGCAGCGTCCGTGTA................................................................................................................................................................ 26 1 20 0.10 2 2 0 0 0 0 0 0 0
.................................................................CCAAGTACGTCTGCAGTGTCCGTGTCC............................................................................................................................................................... 27 1 20 0.10 2 2 0 0 0 0 0 0 0
..............................CGGTAGCCGAATTCATCGCTTCGGAG................................................................................................................................................................................................... 26 0 11 0.09 1 1 0 0 0 0 0 0 0
............................TTCGGTAGCCGAATTCATCGCTT........................................................................................................................................................................................................ 23 0 11 0.09 1 1 0 0 0 0 0 0 0
.................................TAGCCGAATTCATCGCTTCGGAG................................................................................................................................................................................................... 23 0 13 0.08 1 0 0 0 0 1 0 0 0
.................................TAGCCGAATTCATCGCTTCG...................................................................................................................................................................................................... 20 0 14 0.07 1 1 0 0 0 0 0 0 0
...........................................................................CTGAAGCGTCCGTGTCCGTGGTG......................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0
............................................................................TGCAGCGTCCGTGTCCGTGGTG......................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................CCAAGTACGTCTGAAGCGTCCGTGT................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................CCAAGTACGTCTGCAGCGTCCGTGT................................................................................................................................................................. 25 0 20 0.05 1 0 0 0 0 0 0 1 0
...................................GCCGAATTCATCGCTTCGG..................................................................................................................................................................................................... 19 0 20 0.05 1 0 0 0 0 1 0 0 0
.............................................................................GAAGCGTCCGTGTCCGTGG........................................................................................................................................................... 19 1 20 0.05 1 1 0 0 0 0 0 0 0
............................TTCGGTAGCCGAATTCCTCG........................................................................................................................................................................................................... 20 1 20 0.05 1 0 0 0 0 0 1 0 0
...................................................................................TCCGTGTCCGTGGTGTCCGCA................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................CCAAGTACCTCTGCAGCGTCCGTGTCCG.............................................................................................................................................................. 28 1 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................CCAAGTACGTCTGCAGCGTCTGGT.................................................................................................................................................................. 24 3 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................CCAAGTACGTCTGCAGCGTCCTTG.................................................................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................CCCAGTACGTCTGCAGCGTCCGTG.................................................................................................................................................................. 24 1 20 0.05 1 0 0 0 0 0 1 0 0
.GGCAACGACAGCTGCTGGCG...................................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................CCAAGTACGTCTGCAGCGTCCGTGTCA............................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................CCAAGTACGTCTGCAGCGTCCGTG.................................................................................................................................................................. 24 0 20 0.05 1 0 0 0 0 0 1 0 0
.................................................................CCAAGTACGTCTACAGCGTCCGTG.................................................................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................AAGTACGTCTGCAACGTCC..................................................................................................................................................................... 19 1 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................CCAAGTACGTCTGCAGCGTCCC.................................................................................................................................................................... 22 1 20 0.05 1 0 0 1 0 0 0 0 0
.........................................................ACGTGCAGCCAAGTACGTCTG............................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................CTGCAGCGTCCGTGTCCGTGGTGTCCG..................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................GAAGGTGCAGCCAAGTACGTCTGC............................................................................................................................................................................ 24 1 20 0.05 1 0 0 1 0 0 0 0 0
................................................................................GCGTCCGTGTCCGTGGTGTCCGC.................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0
............................................................................TGCAGCGTCCGTGTCCGTGGTGTCCGT.................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................CCAAGTACGTCTGCAGCGTCCGTTA................................................................................................................................................................. 25 2 20 0.05 1 1 0 0 0 0 0 0 0
......................................................................TACGTCTGCAGCGTCCGTGTCCGTG............................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................CCAAGTACGTCTGCAGCGTCTT.................................................................................................................................................................... 22 2 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................CCAAGTACGTCTTCAGCGTCCG.................................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0
............................................................................TGCAGCGTCCGTGTCCGTGGTGTCCG..................................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 0 0 1 0
.................................................................CCAAGTACGTCTGCAGGGTCCGT................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................CCAAGCACGTCTGCAGCGTCCGTG.................................................................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................CAGCCAAGTACGTCTGCAGCGTCCGTG.................................................................................................................................................................. 27 0 20 0.05 1 1 0 0 0 0 0 0 0
...........................ATTCGGTAGCCGAATTCATCG........................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0

Anti-sense strand reads

CCCGTTGCTGTCGACGACCGCTACGCCTAAGCCATCGGCTTAAGTAGCGAAGCCTCTTGCACGTCGGTTCATGCAGACGTCGCAGGCACAGGCACCACAGGCGTAAATAGTGTAAGGAAACTAATAGATGCGATTGTAATCATGTTGACACAAAACAGTATAAAGTATTACCGAAAGATTTTTTAAGTTAAAATTAAAGTCAGCCAACTTCCCCTTTTGGTACTTTTCCGTCAACTTAACGATTTTGTTCG
**************************************************..(((((((((((......))))))....(((((....(((.((((((........))))))........))).....)))))(((((.(((...))))))))..(((((........)))))))))).......................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 GSM343916
embryo
 SRR902011
testis
 M022
male body		 SRR902012
CNS imaginal disc
 V112
male body		 GSM444067
head
 M062
head
.................................................................................GCAGGCACAGGCACCACAGGCGT................................................................................................................................................... 23 0 20 3.70 74 51 18 4 0 1 0 0 0 0 0
................................................................................CGCAGGCACAGGCACCACAGGCGT................................................................................................................................................... 24 0 20 3.25 65 0 55 9 0 1 0 0 0 0 0
..................................................................................CAGGCACAGGCACCACAGGCGT................................................................................................................................................... 22 0 20 1.90 38 32 0 6 0 0 0 0 0 0 0
....................................................................TCATGCAGACGTCGCAGGCACAGGC.............................................................................................................................................................. 25 0 20 1.25 25 1 24 0 0 0 0 0 0 0 0
...GTTGCTGTCGACGACCGCT..................................................................................................................................................................................................................................... 19 0 20 1.20 24 24 0 0 0 0 0 0 0 0 0
........................................................................GCAGACGTCGCAGGCACAGGCACCA.......................................................................................................................................................... 25 0 20 1.05 21 0 20 0 0 1 0 0 0 0 0
.................................................................GGTTCATGCAGACGTCGCAGGCAC.................................................................................................................................................................. 24 0 20 1.00 20 8 12 0 0 0 0 0 0 0 0
.....................TACGCCTAAGCCATCGGCTTAAGT.............................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................CCGCTACGCCTAAGCCATCGGC.................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....TTGCTGTCGACGACCGCTACGC................................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............GACCGCTACGCCTAAGCCATCGG..................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................CCGCTACGCCTAAGCCATCGGCTT.................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............CGACCGCTACGCGTAAGCCATCGG..................................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..................................................................................CAGGCACAGGCACCACAGGCGTCA................................................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................GCAGGCACAGGCACCACAGGCG.................................................................................................................................................... 22 0 20 0.70 14 12 1 1 0 0 0 0 0 0 0
........................................................................GCAGACGTCGCAGGCACAGGCACCAC......................................................................................................................................................... 26 0 20 0.60 12 3 9 0 0 0 0 0 0 0 0
...................................................................................AGGCACAGGCACCACAGGCGT................................................................................................................................................... 21 0 20 0.60 12 0 11 0 0 1 0 0 0 0 0
..................................................AGCCTCTTGCACGTCGGTTCATGCA................................................................................................................................................................................ 25 0 15 0.60 9 9 0 0 0 0 0 0 0 0 0
.....................................................................................GCACAGGCACCACAGGCGT................................................................................................................................................... 19 0 20 0.55 11 9 0 0 2 0 0 0 0 0 0
....................................................................................GGCACAGGCACCACAGGCGT................................................................................................................................................... 20 0 20 0.55 11 7 4 0 0 0 0 0 0 0 0
........................................................................GCAGACGTCGCAGGCACAGGCACCACA........................................................................................................................................................ 27 0 20 0.50 10 0 10 0 0 0 0 0 0 0 0
........................................................................GCAGACGTCGCAGGCACAGGCACC........................................................................................................................................................... 24 0 20 0.50 10 1 8 0 0 1 0 0 0 0 0
................................................................CGGTTCATGCAGACGTCGCAGGCAC.................................................................................................................................................................. 25 0 20 0.50 10 9 0 1 0 0 0 0 0 0 0
..........................................................................AGACGTCGCAGGCACAGGCACCA.......................................................................................................................................................... 23 0 20 0.50 10 4 6 0 0 0 0 0 0 0 0
..................................................................GTTCATGCAGACGTCGCAGGCAC.................................................................................................................................................................. 23 0 20 0.45 9 8 1 0 0 0 0 0 0 0 0
....................................................CCTCTTGCACGTCGGTTCATGCA................................................................................................................................................................................ 23 0 18 0.44 8 8 0 0 0 0 0 0 0 0 0
..........................CTAAGCCATCGGCTTAAGTAGCGAAGCCT.................................................................................................................................................................................................... 29 0 7 0.43 3 2 1 0 0 0 0 0 0 0 0
.....................................................CTCTTGCACGTCGGTTCATGCA................................................................................................................................................................................ 22 0 19 0.42 8 8 0 0 0 0 0 0 0 0 0
..................................................................................CAGGCACAGGCACCACAGGCG.................................................................................................................................................... 21 0 20 0.35 7 7 0 0 0 0 0 0 0 0 0
.........................................................................CAGACGTCGCAGGCACAGGC.............................................................................................................................................................. 20 0 20 0.35 7 0 0 0 0 7 0 0 0 0 0
................................................................CGGTTCATGCAGACGTCGCAGGCA................................................................................................................................................................... 24 0 20 0.35 7 0 7 0 0 0 0 0 0 0 0
...................................................GCCTCTTGCACGTCGGTTCATGCA................................................................................................................................................................................ 24 0 18 0.33 6 6 0 0 0 0 0 0 0 0 0
................................................GAAGCCTCTTGCACGTCGGTTCAT................................................................................................................................................................................... 24 0 12 0.33 4 2 0 0 0 2 0 0 0 0 0
..CGTTGCTGTCGACGACCGCT..................................................................................................................................................................................................................................... 20 0 20 0.30 6 6 0 0 0 0 0 0 0 0 0
....TTGCTGTCGACGACCGCTACG.................................................................................................................................................................................................................................. 21 0 20 0.30 6 6 0 0 0 0 0 0 0 0 0
..............................GCCATCGGCTTAAGTAGCGAAGCCT.................................................................................................................................................................................................... 25 0 11 0.27 3 3 0 0 0 0 0 0 0 0 0
..........................................................................AGACGTCGCAGGCACAGGCACCAC......................................................................................................................................................... 24 0 20 0.25 5 3 2 0 0 0 0 0 0 0 0
.................................................................GGTTCATGCAGACGTCGCAGGC.................................................................................................................................................................... 22 0 20 0.25 5 5 0 0 0 0 0 0 0 0 0
.................................................................GGTTCATGCAGACGTCGCAGG..................................................................................................................................................................... 21 0 20 0.25 5 5 0 0 0 0 0 0 0 0 0
...........................................................................GACGTCGCAGGCACAGGC.............................................................................................................................................................. 18 0 20 0.25 5 5 0 0 0 0 0 0 0 0 0
...........................................................................GACGTCGCAGGCACAGGCACCACA........................................................................................................................................................ 24 0 20 0.25 5 2 3 0 0 0 0 0 0 0 0
.............................AGCCATCGGCTTAAGTAGCGAAGCCT.................................................................................................................................................................................................... 26 0 9 0.22 2 2 0 0 0 0 0 0 0 0 0
.............................................................................CGTCGCAGGCACAGGCACCACAGGCG.................................................................................................................................................... 26 0 20 0.20 4 1 3 0 0 0 0 0 0 0 0
..........................................................................AGACGTCGCAGGCACAGGCACCACA........................................................................................................................................................ 25 0 20 0.20 4 2 2 0 0 0 0 0 0 0 0
.CCGTTGCTGTCGACGACCGCT..................................................................................................................................................................................................................................... 21 0 20 0.20 4 3 0 0 1 0 0 0 0 0 0
..........................CTAAGCCATCGGCTTAAGTAGCG.......................................................................................................................................................................................................... 23 0 20 0.20 4 4 0 0 0 0 0 0 0 0 0
................................................................................CGCAGGCACAGGCACCACAGGC..................................................................................................................................................... 22 0 20 0.20 4 4 0 0 0 0 0 0 0 0 0
..............................................................................GTCGCAGGCACAGGCACCACA........................................................................................................................................................ 21 0 20 0.20 4 3 1 0 0 0 0 0 0 0 0
.......................................................................TGCAGACGTCGCAGGCACAGGC.............................................................................................................................................................. 22 0 20 0.20 4 1 2 0 0 1 0 0 0 0 0
................................................................................CGCAGGCACAGGCACCACA........................................................................................................................................................ 19 0 20 0.20 4 0 4 0 0 0 0 0 0 0 0
..................................................................................CAGGCACAGGCACCACAGGC..................................................................................................................................................... 20 0 20 0.20 4 1 0 0 0 2 0 0 1 0 0
................................................................CGGTTCATGCAGACGTCGCAGG..................................................................................................................................................................... 22 0 20 0.20 4 3 0 1 0 0 0 0 0 0 0
.....................................................................CATGCAGACGTCGCAGGCACAGGCAC............................................................................................................................................................ 26 0 20 0.20 4 0 4 0 0 0 0 0 0 0 0
................................................GAAGCCTCTTGCACGTCGGTTCATGCA................................................................................................................................................................................ 27 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
...GTTGCTTTCGACGACCGCTACGCCTA.............................................................................................................................................................................................................................. 26 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................TTGCCACAGAAAAGTATAAAG...................................................................................... 21 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
..............................................GCGAAGCCTCTTGCACGTCGGTTCAT................................................................................................................................................................................... 26 0 12 0.17 2 0 2 0 0 0 0 0 0 0 0
..................................................................GTTCATGCAGACGTCGCAGGC.................................................................................................................................................................... 21 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0
................................................................CGGTTCATGCAGACGTCGCAGGC.................................................................................................................................................................... 23 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0
........................................................................GCAGACGTCGCAGGCACAGGCACCACAG....................................................................................................................................................... 28 0 20 0.15 3 0 2 0 0 1 0 0 0 0 0
.............................................................TGTCGGTTCATGCAGACGTCGCAGGC.................................................................................................................................................................... 26 1 20 0.15 3 0 3 0 0 0 0 0 0 0 0
.........................................................................CAGACGTCGCAGGCACAGGCACCAC......................................................................................................................................................... 25 0 20 0.15 3 0 3 0 0 0 0 0 0 0 0
..................................................................................AAGGCACAGGCACCACAGGCGT................................................................................................................................................... 22 1 20 0.15 3 0 2 1 0 0 0 0 0 0 0
..............................................................GTCGGTTCATGCAGACGTCGCAGGC.................................................................................................................................................................... 25 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0
CCCGTTGCTGTCGACGACCGCT..................................................................................................................................................................................................................................... 22 0 20 0.15 3 2 0 1 0 0 0 0 0 0 0
..................................................................GTTCATGCAGACGTCGCAGGCA................................................................................................................................................................... 22 0 20 0.15 3 2 1 0 0 0 0 0 0 0 0
......................................................................ATGCAGACGTCGCAGGCACAGGCAC............................................................................................................................................................ 25 0 20 0.15 3 0 3 0 0 0 0 0 0 0 0
..........................................................................AGACGTCGCAGGCACAGGCAC............................................................................................................................................................ 21 0 20 0.15 3 1 0 0 0 1 0 1 0 0 0
.................................................AAGCCTCTTGCACGTCGGTTCATGCA................................................................................................................................................................................ 26 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
...............GACCGCTACGCCTAAGCCAACGG..................................................................................................................................................................................................................... 23 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0
..........................CTAAGCCATCGGCTGAAGTAGCGAAG....................................................................................................................................................................................................... 26 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0
...........................AAAGCCATCGGCTTAAGTAGCGAAGCCT.................................................................................................................................................................................................... 28 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0
......................................................TCTTGCACGTCGGTTCATGCA................................................................................................................................................................................ 21 0 19 0.11 2 2 0 0 0 0 0 0 0 0 0
.......................................................CTTGCACGTCGGTTCATGCA................................................................................................................................................................................ 20 0 19 0.11 2 2 0 0 0 0 0 0 0 0 0
...ATTGCTGTCGACGACCGCTACG.................................................................................................................................................................................................................................. 22 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0
.................................................................................ACAGGCACAGGCACCACAGGCGT................................................................................................................................................... 23 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0
....................................................................TCATGCAGACGTCGCAGGCACAGGCA............................................................................................................................................................. 26 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0
................................................................CGGTTCATGCAGACGTCGCA....................................................................................................................................................................... 20 0 20 0.10 2 0 0 1 1 0 0 0 0 0 0
...........................................GTAGCGAAGCCTCTTGCACGTCG......................................................................................................................................................................................... 23 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........................................................................GACGTCGCAGGCACAGGCACCAC......................................................................................................................................................... 23 0 20 0.10 2 1 0 0 0 0 0 0 1 0 0
..............................................................................GTCGCAGGCACAGGCACCAC......................................................................................................................................................... 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0
.................................................................................GCAGGCACAGGCACCACAGGC..................................................................................................................................................... 21 0 20 0.10 2 1 0 0 0 1 0 0 0 0 0
................................................................................TGCAGGCACAGGCACCACAGGCGT................................................................................................................................................... 24 1 20 0.10 2 0 1 1 0 0 0 0 0 0 0
.............................................................................CGTCGCAGGCACAGGCACCACAGGCGT................................................................................................................................................... 27 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0
....................................................................TCATGCAGACGTCGCAGGCACAGGCAC............................................................................................................................................................ 27 0 20 0.10 2 1 1 0 0 0 0 0 0 0 0
.....................................................................CATGCAGACGTCGCAGGCACAG................................................................................................................................................................ 22 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0
.CCGTTGCTGTCGACGACCGCTA.................................................................................................................................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0
..............................................................GTCGGTTCATGCAGACGTCGCAGGCA................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0
CCCGTTGCTGTCGACGACCGCTA.................................................................................................................................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0
...........................................................................GACGTCGCAGGCACAGGCACCA.......................................................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0
.........................................................................CAGACGTCGCAGGCACAGGCA............................................................................................................................................................. 21 0 20 0.10 2 1 0 0 0 1 0 0 0 0 0
.CCGTTGCTGTCGACGACCG....................................................................................................................................................................................................................................... 19 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0
...................................................................................AGGCACAGGCACCACAGGCG.................................................................................................................................................... 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0
...........................................................................AACGTCGCAGGCACAGGCACCAC......................................................................................................................................................... 23 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................................TGCCACAGAAAAGTATAAAG...................................................................................... 20 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0
................................................GAAGCCTCTTGCACGTCGGTTCATGC................................................................................................................................................................................. 26 0 12 0.08 1 1 0 0 0 0 0 0 0 0 0
...............................CCATCGGCTGAAGTAGCGAAGCC..................................................................................................................................................................................................... 23 1 12 0.08 1 1 0 0 0 0 0 0 0 0 0
...........................................AAAGCGAAGCCTCTTGCACGTCGGT....................................................................................................................................................................................... 25 2 12 0.08 1 1 0 0 0 0 0 0 0 0 0
..............................................................................GTCGCAGGCACAGGCACCACAGGCGTCAG................................................................................................................................................ 29 2 14 0.07 1 1 0 0 0 0 0 0 0 0 0
...................................................GCCTCTTGCACGTCGGTTCATGC................................................................................................................................................................................. 23 0 19 0.05 1 1 0 0 0 0 0 0 0 0 0
...................................CGGCTTAAGTAGCGAAGCCT.................................................................................................................................................................................................... 20 0 19 0.05 1 1 0 0 0 0 0 0 0 0 0
...................................CGGCTTAAGTAGCGAAGCCTC................................................................................................................................................................................................... 21 0 19 0.05 1 1 0 0 0 0 0 0 0 0 0
....................................................CCTCTTGCACGTCGGTTCATGC................................................................................................................................................................................. 22 0 19 0.05 1 1 0 0 0 0 0 0 0 0 0
.......................................................................AGCAGACGTCGCAGGCACAGGCACCA.......................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..............................................................................GTCGCAGGCACAGGCACCACAGGC..................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
................................................................................CGCAGGCACAGGCACCACAGGCG.................................................................................................................................................... 23 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
.................................................................GGTTCATGCAGACGTCGCAGGCA................................................................................................................................................................... 23 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0
...........................................................................GACGTCGCAGGCACAGGCACCACAGGCG.................................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0
..........................................................................AGACGTCGCAGGCACAG................................................................................................................................................................ 17 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0
.....................................................................CATGCAGACGTCGCAGGCACAGG............................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0
.....................................................................CATGCAGACGTCGCAGGCACAGGC.............................................................................................................................................................. 24 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0
................................................................................CGCAGGCACAGGCACCACAGACGT................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0
....................................................................................GGCACAGGCACCACAGGCG.................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
............................AAGCCATCGGCTTAAGTAGC........................................................................................................................................................................................................... 20 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
..........................................................................AGCCGTCGCAGGCACAGGCACCACA........................................................................................................................................................ 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0
..............................................................................GTCGCAGGCACAGGCACCACAGG...................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...GTTGCTGTCGACGACCGCTA.................................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
............................................................TAGTCGGTTCATGCAGACGTCGC........................................................................................................................................................................ 23 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..........................................................................TGACGTCGCAGGCACAGGCACC........................................................................................................................................................... 22 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0
..............................................................GTCGGTTCATGCAGACGTC.......................................................................................................................................................................... 19 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0
.................................................................................CCAGGCACAGGCACCACAGGCGT................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..............................................................................GTCGCAGGCACAGGCACCA.......................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.........................................................................CAGACGTCGCAGGCGCAGGC.............................................................................................................................................................. 20 1 20 0.05 1 0 0 0 0 0 0 0 0 0 1
...............................................................................TCGCAGGCATAGGCACCACAGGCGT................................................................................................................................................... 25 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0
................................................................CGGTTCATGCAGACGTCGCAGGCACAG................................................................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..............................................................GTCGGTTCATGCAGACGTCGC........................................................................................................................................................................ 21 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0
..........................................................................AGACGTCGCAGGCACAGGCGCCAC......................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..CGTTGCTGTCGACGACCGCTAC................................................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
.............................................................................CGTCGCAGGCACAGGCACCACAGG...................................................................................................................................................... 24 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0
....TTGCTGTCGACGACCGCTA.................................................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
............................................................................ACGTCGCAGGCACAGGCACCA.......................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...........................TAAGCCATCGGCTTAAGTAGC........................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
............................................................................ACGTCGCAGGCACAGGCACCACAGG...................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...........................................................CACGTCGGTTCATGCAGACGTCGCAGG..................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...........................................................CACGTCGGTTCATGCAGACGTCGCAG...................................................................................................................................................................... 26 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
...................................................................TTCATGCAGACGTCGCAGGCAC.................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..................................................AGCCTCTTCCACGTCGGTTCATGCA................................................................................................................................................................................ 25 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0
...............................................................................TCGCAGGCACAGGCACCACA........................................................................................................................................................ 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...................................................................TTCATGCAGACGTCGCAGGCACAGG............................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
............................................................ACGTCGGTTCATGCAGACGTCGCAGGCA................................................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0
.....................................................................AATGCAGACGTCGCAGGCAC.................................................................................................................................................................. 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...........................................................CACGTCGGTTCATGCAGACGT........................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
........................................................................GCAGACGCCGCAGGCACAGGCACCA.......................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0
................................................................................CGCAGGCACAGGCACCACAGGCTT................................................................................................................................................... 24 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0
........................................................................GCAGACGTCGCAGGCACAG................................................................................................................................................................ 19 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0
..............................................................................GTCGCAGGCACAGGCACC........................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.............................................................................CGTCGCAGGCACAGGCACCAC......................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0
...........................................................................GACGTCGCAGGCACAGGCAC............................................................................................................................................................ 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
................................................................................CGCAGGCACAGGCACCACAGGCGTTA................................................................................................................................................. 26 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0
................................................................................CGCAGGCACAGGCACCACAGG...................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0
...............................................................TCGGTTCATGCAGACGTCGCAG...................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
CCCGTTGCTGTCGACGACCGCTACG.................................................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.................................................................GGTTCATGCAGACGTCGCAGGCACAG................................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.................................................................GGTTCATGCAGACGTCGCAGGCACAGG............................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..............................................................GTCGGTTCATGCAGACGTCGCA....................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.............................................................................GCTCGCAGGCACAGGCACCACAGGCGT................................................................................................................................................... 27 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0
.............................................................................AGTCGCAGGCACAGGCACCACAGGCGT................................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0
..............................................................GTCGGTTCATGCAGACGT........................................................................................................................................................................... 18 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0
...............................................................TCGGTTCATGCAGACGTCGCAGG..................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.......................................................................TGCAGACGTCGCAGGCACA................................................................................................................................................................. 19 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0
.....................................................................CATGCAGACGTCGCAGGCACAGGCACC........................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0
..................................................................................CAGGCACAGGCACCACGGGCGT................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
........................................................................GCAGACTTCGCAGGCACAGGCACC........................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...............................................................................TCGCAGGCACAGGCACCACAGGCGT................................................................................................................................................... 25 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0
................................................................................TGCAGGCACAGGCAACACAGGCGT................................................................................................................................................... 24 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0
.........................................................TGCACGTCGGTTCATGCAGACGT........................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..............................................................................GTCGCATGCACAGGCACCAC......................................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...........................................................................GACGTCGCAGGCACAGGCACCACAG....................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...................................................................TTCATGCAGACGTCGCAGGCACAG................................................................................................................................................................ 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...........................................................................GACGTCGCAGGCACAGGCA............................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.............................................................................CGTCGCAGGCACAGGCACCAAAG....................................................................................................................................................... 23 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0
...............................................................TCGGTTCATGCAGACGTCGCAGGC.................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
....................................................................TCATGCAGACGTCGCAGGCA................................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0
........................................................................GCAGACGTCGCAGGCACAGGCAC............................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.....................................................................CATGCAGACGTCGCAGGCA................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.....................................................CTCTTGCACGTCGGTTCATGC................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
ACCGTTGCTGTCGACGACCGCTAC................................................................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...............................................................................TCGCAGGCACAGGCACCACAGGC..................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0
..........................CTAAGCCATCGGCTTAAGTAGCGTAGCGT.................................................................................................................................................................................................... 29 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0
...............................................................................TCGCAGGCACAGGCACCACAGGCTT................................................................................................................................................... 25 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0
..........................................................................AGACGTCGCAGGCACAGG............................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
........................................................................GCAGACGTCGCAGGCACAGGC.............................................................................................................................................................. 21 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0
................................................................GGGTTCATGCAGACGTCGCAGGCAC.................................................................................................................................................................. 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0
.........................................................................CAGACGTCGCAGGCACAGGCACGA.......................................................................................................................................................... 24 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0
..................................................................GTTCATGCAGACGTCGCAGGCACAGGC.............................................................................................................................................................. 27 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0
.................................................................................GCAGGCACAGGCACCACAG....................................................................................................................................................... 19 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0
............................................................................ACGTCGCAGGCACAGGCACCACAG....................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.............................................................................CGTCGCAGGCACAGGCACCACAGGC..................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.................................................................GGTTCATGCAGACGTCGCAGGCACA................................................................................................................................................................. 25 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0
.............................................................CGTCGGTTCATGCAGACGTCGC........................................................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...........................................................CACGTCGGTTCATGCAGACGTCGC........................................................................................................................................................................ 24 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0
.............................................................CGTCGGTTCATGCAGACGTCGCAGGC.................................................................................................................................................................... 26 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0
..................................................................................CAGGCACAGGCACCACAGG...................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..........................................................................AGACGTCGCAGGCACAGGCACC........................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
......................................................................ATGCAGACGTCGCAGGCATAGGCACC........................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..................................................................GTTCATGCAGACGTCGCAGGCACAGG............................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
....................................................................TCATGCAGACGTCGCAGGCACAGG............................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
................................................................................TGCAGGCACAGGCACCACAGGCTT................................................................................................................................................... 24 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0
.........................................................................CAGACGTCGCAGGCACAGGCACCACAG....................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0
........................................................................GCAGACGTCGCAGGCACAGG............................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...........................TAAGCCATCGGCTTAAGTAG............................................................................................................................................................................................................ 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
................................................................................CGCAGGCACAGGCACCACAG....................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0
............................................................................ACGTCGCAGGCACAGGCACCAC......................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...............................................................TCGGTTCATGCAGACGTCGCAGGT.................................................................................................................................................................... 24 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0
...........................................................................GACGTCGCAGGCACAGGCACC........................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0
............................................................................ACGTCGCAGGCACAGGCACCACAGGCGT................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
......................................................................ATGCAGACGTCGCAGGCACAGGC.............................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.................................................................................GCAGGCACAGGCACCACAGGCTT................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
................................................................................CGCAGGCACAGGCGCCACAGGCGT................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................GCACAGGCACCACAGGCG.................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...............................................................................TCGCAGGCACAGGCACCACAGG...................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
............................................................................CCGTCGCAGGCACAGGCACCA.......................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
................................................................CGGTTCGTGCAGACGTCGCA....................................................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:18149696-18149946 - dps_624 GGGCAACG---ACAGCTGCTGGCGATGCGGATTCGGTAGCCGAATTCATC------------------------------------------GCTTCGGAGAACGTGCAGCCAAGTACGTCTGCAGC---GTCCGTGTCCGTGGTG---TCCGCATTTATCACATTCCTTTGATTATCTACGCTAACATTAGTACAACTGTGTTTTGTCATATTTCATAATGGCTTTCTAAAAAATT-CAATTTTAATTTCAGTCGGTTGAAGGGGAAAACCATGAAAAGGCAGTTGAATTGCTAAAACAAGC
droPer2 scaffold_3:488791-489041 - dpe_1339 GGGCAACG---ACAGCTGCTGGCGATGCGGATTCGGTAGCCGAATTCAGC------------------------------------------GCTTCGGAGAACGTGCAGCCAAGTACGTCTGCAGC---GTCCGTGTCCGTGGTG---TCCGCATTTATCACATTCCTTTGATTATCTACGCTAACATTAGTACAACTGTGTTTTGTCATATTTCATAATGGCTTTCTAAAAAATT-CAATTTTAATTTCAGTCGGTTGAAGGGGAAAACCATGAAAAGGCAGTTGAATTGTTAAAACAAGC
droWil2 scf2_1100000004943:13825958-13826062 - GTTCTTTG-------------TCGAAAATCTTTT-------------------------------------------------------------------------------------------------------ATTATGACTGTG-----------------------------------------------------------------------------TCATAAT-AAATCTAT----TTTACAGTCTGTTGAAGGAGAAAACCATGAGAAAGCTGTGGAACTATTAAAGCAGGC
droVir3 scaffold_12958:1963320-1963424 + TAGCTGTG---AGGTCTGCTGTGGACACTGATTCTGTCCCGAAATGTGTGATATGGGCACGAGAAAAACCAGTTGAAT---------------------------------------AATCCGTGTC---GTCCG---------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCGTAGGTGTTC
droMoj3 scaffold_6540:4272778-4272841 + ATTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC----ATTTCAGTCTGTTGAAGGCGAAAATCACGAGAGAGCGGTTGAATTATTAAAGCAAGC
droGri2 scaffold_15116:386000-386090 - TTTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTATTGTGTATTTGTTTTCT-----ATTT---C----ATTGCAGTCTGTTGAAGGTGAAAATCATGAGAGAGCAGTTGAACTATTGAAGCAAGC
droAna3 scaffold_13340:6742696-6742788 - ATAATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATACCAGATTTTAAAACA-TAAAACTTATTGCAGTCTGTGGAAGGAGAAAATCACGAGAAGGCCGTAGAACTCTTAAAGCAAGC
droBip1 scf7180000394900:22959-23072 - GGGCTAG------------AACTGAGATCAATTCGCCGTCCGAATTTCTC---------------------------------------------AAGGAAAACGAGCAATT------GTCTGAGCAAATGT---CCTCCATGGTGATA---CCACAGGAG-GTTTTTTTTGACCATCGATGT-----------------------------------------------------------------------------------------------------------------------T
droKik1 scf7180000297873:33538-33653 - TGGTGTTG---AGATCGGGAACGGCTAAAGATTCGGCATTCGAAGGTGCCGGGTCAGTAA------------------------------------TGGCAGCAGATCCGCCAGGTTTATCAGTTGA---GTCCG---CTGCGGTG---TCTCAATCTCTGAC-------------------------------------------------------------------------------------------------------------------------------------------A
droFic1 scf7180000454055:790262-790334 - TTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAATTTAAATT----ATTTTAGTCTGTTGAAGGAGAAAATCACGAAAAGGCCGTTGAGTTGTTAAAGCAGGC
droEle1 scf7180000491212:206784-206852 - AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTCCATT----ATTTCAGTCTGTTGAAGGAGAAAATCACGAAAAGGCAGTAGAACTGTTAAAGCAGGC
droRho1 scf7180000777763:11533-11648 + AAATTTTGCTAGGATCAGCAGCTAAAAAAGATTCGGTATCCGAACAATCC------------------------------------------GTTACAGAATGCATGCAACCAGGGACTTCTAA-----------------------------------------------------------------------------------------------------------------------------------------------GAATTCCGATTTGTCCGTAGTGGTTTCACAATTA--
droBia1 scf7180000302136:1686853-1686907 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAGTCTGTTGAAGGAGAAAACCACGAAAAGGCCGTTGAGCTGCTGAAGCAAGC
droTak1 scf7180000415658:205172-205244 - TCTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAATTGTAATT----ATTTCAGTCGGTTGAAGGAGAAAATCACGAAAAGGCCGTTGAGCTTCTGAAGCAAGC
droEug1 scf7180000409692:510720-510776 + A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGTCTGTTGAAGGAGAAAATCACGAAAAGGCCGTTGAGCTGCTTAAACAGGC
dm3 chr3R:20890469-20890576 - CATTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGTTATGTA---CCTTAACTCCTTAAGAACTTG--CAAAATATCAAT----ATTTCAGTCTGTCGAAGGAGAAAACCACGAGAAGGCCGTAGAGCTATTAAAGCAAGC
droSim2 3r:20401275-20401342 - AAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCAAT----ATTTCAGTCTGTTGAAGGAGAAAACCACGAGAAGGCCGTGGAGCTATTGAAGCAAGC
droSec2 scaffold_33:152043-152110 - AAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAT----ATTTCAGTCTGTTGAAGGAGAAAACCACGAGAAGGCCGTGGAGCTATTGAAGCAAGC
droYak3 3L:23814980-23815072 + AACGGC-------------AGCTAAAAAAGATTCGGA---------------------------------------GCAATCCGATCAATCCGTTGTGGAGGGAGTCCAGCCTGGGATTGCTACAGA---TTCCG------TTTTG---TCCGCAC--------------------------------------------------------------------------------------------------------------------------------------------------T
droEre2 scaffold_4820:7162244-7162311 + AAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCAAC----ATTTCAGTCTGTTGAAGGAGAAAACCACGAGAAGGCCGTGGAGCTATTAAAGCAAGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GGGCAACG---ACAGCTGCTGGCGATGCGGATTCGGTAGCCGAATTCATC------------------------------------------GCTTCGGAGAACGTGCAGCCAAGTACGTCTGCAGC---GTCCGTGTCCGTGGTG---TCCGCATTTATCACATTCCTTTGATTATCTACGCTAACATTAGTACAACTGTGTTTTGTCATATTTCATAATGGCTTTCTAAAAAATT-CAATTTTAATTTCAGTCGGTTGAAGGGGAAAACCATGAAAAGGCAGTTGAATTGCTAAAACAAGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................CCAAGTACGTCTGCAGC---GTCCGT.......................................................................................................................................................................232012.20244024400000000
................TGCTGGCGATGCGGATTCGGTAG........................................................................................................................................................................................................................................................................2314.0040000000040
..............................................................................................................CCAAGTACGTCTGCAGC---GTCC.........................................................................................................................................................................21203.657307300000000
..............................................................................................................CCAAGTACGTCTGCAGC---GTCCGTGTCC...................................................................................................................................................................27202.404804800000000
..............................................................................................................CCAAGTACGTCTGCAGC---GTCCGTGTCCG..................................................................................................................................................................28202.104204200000000
............CAGCTGCTGGCGATGCGGATTCGG...........................................................................................................................................................................................................................................................................2411.0010000000010
.......................................................................................................................................TGTCCGTGGTG---TCCGCAT...................................................................................................................................................1811.0010100000000
................................................................................................................................................................................................................................................................GTTGAAGGGGAAAACCATGAAAA........................2311.0010010000000
.................................................................................................................................................................................................................................................TTTTAATTTCAGTCGGTTGAAGGGG.....................................2511.0010000000010
..................................................................................................................................................................................................................................................................TGAAGGGGAAAACCATGAAAAGGC.....................2411.0010001000000
................TGCTGGCGATGCGGATTCGG...........................................................................................................................................................................................................................................................................2011.0010100000000
...............................TTCGGTAGCCGAATTCATC------------------------------------------GCTTCGG............................................................................................................................................................................................................2690.4440300001000
...........................................ATTCATC------------------------------------------GCTTCGGAGAACGTGCAG.................................................................................................................................................................................................2580.3830000000030
..............................................................................................................CCAAGTACGTCTGCAGC---GTC..........................................................................................................................................................................20200.3570020410000
........................................CGAATTCATC------------------------------------------GCTTCGGAGAACGT.....................................................................................................................................................................................................2460.3320000000200
................................................TC------------------------------------------GCTTCGGAGAACGTGCAGC................................................................................................................................................................................................21100.3030300000000
.....................................AGCCGAATTCATC------------------------------------------GCTTCGGAGAA........................................................................................................................................................................................................24110.2730000000030
...............................TTCGGTAGCCGAATTCATC------------------------------------------GCT................................................................................................................................................................................................................22120.2530300000000
...........................................................................................................CAGCCAAGTACGTCTGCAGC---GTCC.........................................................................................................................................................................24200.2550500000000
..........................................AATTCATC------------------------------------------GCTTCGGAGAACGTGC...................................................................................................................................................................................................2480.2520000000020
.......................................................................................................................TCTGCAGC---GTCCGTGTCCGTGG...............................................................................................................................................................22200.2550500000000
................................................TC------------------------------------------GCTTCGGAGAACGTGCAGCCAAG............................................................................................................................................................................................2590.2220100000100
..............................................................................................................................C---GTCCGTGTCCGTGGTG---TCC.......................................................................................................................................................20200.2040400000000
...............................................................................................................CAAGTACGTCTGCAGC---GTC..........................................................................................................................................................................19200.2040400000000
......................................GCCGAATTCATC------------------------------------------GCTTCGGAGAACG......................................................................................................................................................................................................2560.1710100000000
...................................................................................................................TACGTCTGCAGC---GTCCGTGTCCGT.................................................................................................................................................................24200.1530300000000
..............................................................................................................CCAAGTACGTCTGCAGC---GTCCA........................................................................................................................................................................22200.1530300000000
...............................................................................................................CAAGTACGTCTGCAGC---GTCCGTGTC....................................................................................................................................................................25200.1530200010000
.........................................GAATTCATC------------------------------------------GCTTCGGAGAACGTGC...................................................................................................................................................................................................2580.1310000000010
............................................TTCATC------------------------------------------GCTTCGGAGAACG......................................................................................................................................................................................................1980.1310100000000
..........................................AATTCATC------------------------------------------GCTTCGGAGAACGTGCAG.................................................................................................................................................................................................2680.1310000000010
.........................................GAATTCATC------------------------------------------GCTTCGGAGAACGTG....................................................................................................................................................................................................2480.1310100000000
...............................TTCGGTAGCCGAATTCATC------------------------------------------GCTTCGGA...........................................................................................................................................................................................................2780.1310100000000
.............................................TCATC------------------------------------------GCTTCGGAGAACGTGCAG.................................................................................................................................................................................................2380.1310100000000
................................................TC------------------------------------------GCTTCGGAGAACGTGCAGCC...............................................................................................................................................................................................22100.1010100000000
...........................................................................................................CAGCCAAGTACGTCTGCAGC---GTC..........................................................................................................................................................................23200.1020000200000
..................................................................................................................................GTCCGTGTCCGTGGTG---TC........................................................................................................................................................18200.1020200000000
..............................................................................................................CCAAGTACGTCTGCAGC---GTCCGTGTA....................................................................................................................................................................26200.1020200000000
.................................CGGTAGCCGAATTCATC------------------------------------------GCTTCGGAG..........................................................................................................................................................................................................26110.0910100000000
...............................TTCGGTAGCCGAATTCATC------------------------------------------GCTT...............................................................................................................................................................................................................23110.0910100000000
....................................TAGCCGAATTCATC------------------------------------------GCTTCGGAG..........................................................................................................................................................................................................23130.0810000000100
....................................TAGCCGAATTCATC------------------------------------------GCTTCG.............................................................................................................................................................................................................20140.0710100000000
.........................................................................................................................TGCAGC---GTCCGTGTCCGTGGTG---..........................................................................................................................................................22200.0510100000000
..............................................................................................................CCAAGTACGTCTGCAGC---GTCCGTGT.....................................................................................................................................................................25200.0510000001000
......................................GCCGAATTCATC------------------------------------------GCTTCGG............................................................................................................................................................................................................19200.0510000000100
...................................................................................................................................TCCGTGTCCGTGGTG---TCCGCA....................................................................................................................................................21200.0510100000000
.GGCAACG---ACAGCTGCTGGCG.......................................................................................................................................................................................................................................................................................20200.0510100000000
..............................................................................................................CCAAGTACGTCTGCAGC---GTCCGTGTCA...................................................................................................................................................................27200.0510100000000
..............................................................................................................CCAAGTACGTCTGCAGC---GTCCGTG......................................................................................................................................................................24200.0510000100000
..............................................................................................................CCAAGTACGTCTGCAGC---GTCCC........................................................................................................................................................................22200.0510010000000
......................................................................................................ACGTGCAGCCAAGTACGTCTG....................................................................................................................................................................................21200.0510100000000
........................................................................................................................CTGCAGC---GTCCGTGTCCGTGGTG---TCCG......................................................................................................................................................27200.0510100000000
.............................................................................................................................GC---GTCCGTGTCCGTGGTG---TCCGC.....................................................................................................................................................23200.0510100000000
.........................................................................................................................TGCAGC---GTCCGTGTCCGTGGTG---TCCGT.....................................................................................................................................................27200.0510100000000
..............................................................................................................CCAAGTACGTCTGCAGC---GTCCGTTA.....................................................................................................................................................................25200.0510100000000
...................................................................................................................TACGTCTGCAGC---GTCCGTGTCCGTG................................................................................................................................................................25200.0510100000000
..............................................................................................................CCAAGTACGTCTGCAGC---GTCTT........................................................................................................................................................................22200.0510100000000
.........................................................................................................................TGCAGC---GTCCGTGTCCGTGGTG---TCCG......................................................................................................................................................26200.0510000001000
...........................................................................................................CAGCCAAGTACGTCTGCAGC---GTCCGTG......................................................................................................................................................................27200.0510100000000
..............................ATTCGGTAGCCGAATTCATC------------------------------------------G..................................................................................................................................................................................................................21200.0510100000000
droPer2
GGGCAACG---ACAGCTGCTGGCGATGCGGATTCGGTAGCCGAATTCAGC------------------------------------------GCTTCGGAGAACGTGCAGCCAAGTACGTCTGCAGC---GTCCGTGTCCGTGGTG---TCCGCATTTATCACATTCCTTTGATTATCTACGCTAACATTAGTACAACTGTGTTTTGTCATATTTCATAATGGCTTTCTAAAAAATT-CAATTTTAATTTCAGTCGGTTGAAGGGGAAAACCATGAAAAGGCAGTTGAATTGTTAAAACAAGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............CTGCTGGCGATGCGGATTCG............................................................................................................................................................................................................................................................................2011.001010000
.....................................................................................................................................................................................................................................................................................AAGGCAGTTGAATTGTTAAAACA...2311.001010000
...............................................................................................................................................................................................................................................................................CATGAAAAGGCAGTTGAATTGTTAAAAC....2811.001100000
.......................................................................................................................................................................................................................................................TTTCAGTCGGTTGAAGGGGAA...................................2111.001000001
.......G---ACAGCTGCTGGCGATGCGT.................................................................................................................................................................................................................................................................................2040.251000001
..............................................................................................................CCAAGTACGTCTGCAGC---GTCCGTGTCC...................................................................................................................................................................27200.204040000
...........................................................................................................CAGCCAAGTACGTCTGCAGC---.............................................................................................................................................................................20200.051100000
...CAACG---ACAGCTGCTGGCGATG....................................................................................................................................................................................................................................................................................21200.051010000
droWil2
GTTCTTTG-------------TCGAAAATCTTTT-------------------------------------------------------------------------------------------------------ATTATGACTGTG-----------------------------------------------------------------------------TCATAAT-AAATCTAT----TTTACAGTCTGTTGAAGGAGAAAACCATGAGAAAGCTGTGGAACTATTAAAGCAGGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................................ATGAGAAAGCTGTGGAACTATTAAAG.....2611.00110000
...............................................................................................................................................................................................................................................................................CATGAGAAAGCTGTGGAACTATTA........2411.00110000
droVir3
TAGCTGTG---AGGTCTGCTGTGGACACTGATTCTGTCCCGAAATGTGTGATATGGGCACGAGAAAAACCAGTTGAAT---------------------------------------AATCCGTGTC---GTCCG---------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCGTAGGTGTTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................TCCGTGTC---GTCCG---------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCGTAGGTGT..2620.501000000000000000000000000010000000000000000000000000000000000000
...............CTGCTGTGGACACTGATTCTG...........................................................................................................................................................................................................................................................................21130.081000000000000000000000000000100000000000000000000000000000000000
droMoj3
ATTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC----ATTTCAGTCTGTTGAAGGCGAAAATCACGAGAGAGCGGTTGAATTATTAAAGCAAGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TTTTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTATTGTGTATTTGTTTTCT-----ATTT---C----ATTGCAGTCTGTTGAAGGTGAAAATCATGAGAGAGCAGTTGAACTATTGAAGCAAGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........................................................................................................................................................................................................................................................TGCAGTCTGTTGAAGGTGA....................................1911.00101
droAna3
ATAATTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATACCAGATTTTAAAACA-TAAAACTTATTGCAGTCTGTGGAAGGAGAAAATCACGAGAAGGCCGTAGAACTCTTAAAGCAAGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
GGGCTAG------------AACTGAGATCAATTCGCCGTCCGAATTTCTC---------------------------------------------AAGGAAAACGAGCAATT------GTCTGAGCAAATGT---CCTCCATGGTGATA---CCACAGGAG-GTTTTTTTTGACCATCGATGT-----------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droKik1
TGGTGTTG---AGATCGGGAACGGCTAAAGATTCGGCATTCGAAGGTGCCGGGTCAGTAA------------------------------------TGGCAGCAGATCCGCCAGGTTTATCAGTTGA---GTCCG---CTGCGGTG---TCTCAATCTCTGAC-------------------------------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droFic1
TTTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAATTTAAATT----ATTTTAGTCTGTTGAAGGAGAAAATCACGAAAAGGCCGTTGAGTTGTTAAAGCAGGCSizeHit CountTotal NormTotal
No Reads
droEle1
AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATTCCATT----ATTTCAGTCTGTTGAAGGAGAAAATCACGAAAAGGCAGTAGAACTGTTAAAGCAGGCSizeHit CountTotal NormTotal
No Reads
droRho1
AAATTTTGCTAGGATCAGCAGCTAAAAAAGATTCGGTATCCGAACAATCC------------------------------------------GTTACAGAATGCATGCAACCAGGGACTTCTAA-----------------------------------------------------------------------------------------------------------------------------------------------GAATTCCGATTTGTCCGTAGTGGTTTCACAATTA--SizeHit CountTotal NormTotal
No Reads
droBia1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAGTCTGTTGAAGGAGAAAACCACGAAAAGGCCGTTGAGCTGCTGAAGCAAGCSizeHit CountTotal NormTotal
No Reads
droTak1
TCTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAATTGTAATT----ATTTCAGTCGGTTGAAGGAGAAAATCACGAAAAGGCCGTTGAGCTTCTGAAGCAAGCSizeHit CountTotal NormTotal
No Reads
droEug1
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCAGTCTGTTGAAGGAGAAAATCACGAAAAGGCCGTTGAGCTGCTTAAACAGGCSizeHit CountTotal NormTotal
No Reads
dm3
CATTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGTTATGTA---CCTTAACTCCTTAAGAACTTG--CAAAATATCAAT----ATTTCAGTCTGTCGAAGGAGAAAACCACGAGAAGGCCGTAGAGCTATTAAAGCAAGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................AACCACGAGAAGGCCGTAGAGCTAT..........2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................CGAGAAGGCCGTAGAGCTATTAAA......2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................AAGGAGAAAACCACGAGAAGG......................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000
...........................................................................................................................................................................................................................................................................AAACCACGAGAAGGCCGTAGAGCTATT.........2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GAAGGCCGTAGAGCTATT.........1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................ACCACGAGAAGGCCGTAGAGCTAT..........2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................AGGCCGTAGAGCTATTAAAGCA...2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................AAACCACGAGAAGGCCGTAGA...............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................ACGAGAAGGCCGTAGAGCTATT.........2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TGTCGAAGGAGAAAACCACGA...........................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................ATTTCAGTCTGTCGAAGGAGA....................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................CACGAGAAGGCCGTAGAGCTATT.........2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GAGAAGGCCGTAGAGCTATTAAAGC....2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................ACGAGAAGGCCGTAGAGCTAT..........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................................................................................................................................................................................................................................................................................CGAGAAGGCCGTAGAGCTATT.........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................CCACGAGAAGGCCGTAGAGCTATT.........2412.0020000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................CCACGAGAAGGCCGTAGAGCTATTAA.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................AAACCACGAGAAGGCCGTAGAGCTAT..........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................ACGAGAAGGCCGTAGAGCTATTAAATA....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................AGAAGGCCGTAGAGCTATTA........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................AGAAAACCACGAGAAGGCCGTAGAGCT............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GGAGAAAACCACGAGAAGGCCGTAG................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................CCACGAGAAGGCCGTAGAGCT............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................AAAACCACGAGAAGGCCGTAGAGCTAT..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................CCACGAGAAGGCCGTAGAGCTAT..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GAGAAGGCCGTAGAGCTATT.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GAGAAGGCCGTAGAGCTATTA........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................AAGGAGAAAACCACGAGAAGGC.....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................GAGAAAACCACGAGAAGGCCG...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................GAAGGAGAAAACCACGAGAAGGC.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................TTTCAGTCTGTCGAAGGAGA....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GAAGGCCGTAGAGCTATTAA.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................ACCACGAGAAGGCCGTAGAGCTATT.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................AGAACTTG--CAAAATATCAAT----A........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................GAGAAAACCACGAGAAGGCCGTA.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................ACCACGAGAAGGCCGTAGAGCT............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................AAAACCACGAGAAGGCCGTAGAGCT............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GGAGAAAACCACGAGAAGGCCGTAGAGC.............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................GAAGGAGAAAACCACGAGAAGC......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GAGAAGGCCGTAGAGCTATTAAAGA....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................AAACCACGAGAAGGCCGTAGAGC.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................CACGAGAAGGCCGTAGAGCTAT..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TCAAT----ATTTCAGTCTGTCGA..........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................GAAAACCACGAGAAGGCCGTAG................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................................................................................................................GTCTGTCGAAGGAGAAAACCACGA...........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................GTCGAAGGAGAAAACCACGAG..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GAGAAGGCCGTAGAGCTAT..........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................GAAGGAGAAAACCACGAGA.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................AT----ATTTCAGTCTGTCGAAGGA......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................ACCACGAGAAGGCCGTAGAGC.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................AACCACGAGAAGGCCGTAGAGCT............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TCAAT----ATTTCAGTCTGTCGAA.........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
AAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCAAT----ATTTCAGTCTGTTGAAGGAGAAAACCACGAGAAGGCCGTGGAGCTATTGAAGCAAGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................T----ATTTCAGTCTGTTGAAGGAG.....................................2111.00100001000000000000
..........................................................................................................................................................................................................................................................................................CGTGGAGCTATTGAAGCAAGC2111.00100000001000000000
................................................................................................................................................................................................................................................................................ACGAGAAGGCCGTGGAGCTAC..........2111.00101000000000000000
droSec2
AAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATCAAT----ATTTCAGTCTGTTGAAGGAGAAAACCACGAGAAGGCCGTGGAGCTATTGAAGCAAGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................TGTTGAAGGAGAAAACCACGAGA.........................2311.0010100
.............................................................................................................................................................................................................................................TCAAT----ATTTCAGTCTGTTGAA.........................................2111.0011000
droYak3
AACGGC-------------AGCTAAAAAAGATTCGGA---------------------------------------GCAATCCGATCAATCCGTTGTGGAGGGAGTCCAGCCTGGGATTGCTACAGA---TTCCG------TTTTG---TCCGCAC--------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................TTGCTACAGA---TTCCG------TTTTG---TCCGC.....................................................................................................................................................25200.20403100000000
.....................................................................................................................TTGCTACAGA---TTCCG------TTTTG---TCCGCAC--------------------------------------------------------------------------------------------------------------------------------------------------.27200.15303000000000
.........................................................................................TCCGTTGTGGAGGGAGTCCAGCCTGGG...........................................................................................................................................................................................2770.14101000000000
.....................................................................................TCAATCCGTTGTGGAGGGAGTCCAGCC...............................................................................................................................................................................................2790.11101000000000
.....................................................................................................................TTGCTACAGA---TTCCG------TTTTG---TCCGCA....................................................................................................................................................26200.10202000000000
.....................................................................................................................TTGCTACAGA---TTCCG------TTTTG---TCCG......................................................................................................................................................24200.10202000000000
...............................TTCGGA---------------------------------------GCAATCCGATCAATCCGTTG...............................................................................................................................................................................................................26180.06101000000000
...GGC-------------AGCTAAAAAAGATTCGGA---------------------------------------GCAA...............................................................................................................................................................................................................................25190.05101000000000
....GC-------------AGCTAAAAAAGATTCGGA---------------------------------------GCAAT..............................................................................................................................................................................................................................25190.05100000010000
.....................................................................................................................TTGCTACAGA---TTCCG------TTTTG---TCC.......................................................................................................................................................23200.05100100000000
....GC-------------AGCTAAAAAAGATTCGGA---------------------------------------GC.................................................................................................................................................................................................................................22200.05101000000000
................................................................................................TGGAGGGAGTCCAGCCTGGGATTGC......................................................................................................................................................................................25200.05101000000000
......................................................................................................................TGCTACAGA---TTCCG------TTTTG---TCCGT.....................................................................................................................................................24200.05101000000000
.........................................................................................................TCCAGCCTGGGATTGCTACAGA---TTC..........................................................................................................................................................................25200.05101000000000
.....................................................................................................................TTGCTACAGA---TTCCG------TTTTG---TC........................................................................................................................................................22200.05100100000000
..........................................................................................................CCAGCCTGGGATTGCTACAGA---TTCCG------..................................................................................................................................................................26200.05100010000000
droEre2
AAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCAAC----ATTTCAGTCTGTTGAAGGAGAAAACCACGAGAAGGCCGTGGAGCTATTAAAGCAAGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/17/2015 at 10:53 PM