dps_523

exon [Dpse\GA26543:2]; exon [Dpse\GA26543:3]; intron [Dpse\GA26543-in]; pseudogene [Dpse\GA26543-RB]

##################################################-----------------------------------------------------------------------------------------------------------------------------################################################## CCAAGCTGCGGATGAAGATGGAGCGAAAAGACTCTGGATGAGTGTGCCAGGTTACCACTACCACAATGCCTTCTACAAGGACAAATGTTTAGTTGGCGTGTATTAACATATAAAGAAATGAATTGAGTGGAAATTGTTTTGTATTAAACCTTATTTTAAACACAATCAAAATCAGTAGTACATCATCCCCTCGACTGGAGCCCTTCGGCCAAGCGTCAGACTTTA ************************************************....(((((...(((.((((..(((....(((....))))))..))))))).....(((........))).....)))))...(((..((((.(((((......)))))..)))).)))......************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M040 female body	SRR902011 testis	SRR902010 ovaries	V112 male body	SRR902012 CNS imaginal disc	M059 embryo	M062 head	GSM343916 embryo	GSM444067 head
..AAGCTGCGGATGAAGATGGAGC.........................................................................................................................................................................................................	22	0	9	1.33	12	12	0	0	0	0	0	0	0	0
......................................................................TTCTACAAGGACAAATGTTTAGTTGGC................................................................................................................................	27	0	1	1.00	1	1	0	0	0	0	0	0	0	0
......TGCGGATGAAGATGGAGCGAAAAGAC.................................................................................................................................................................................................	26	0	5	0.80	4	0	4	0	0	0	0	0	0	0
..AAGCTGCGGATGAAGATGGAGCG........................................................................................................................................................................................................	23	0	8	0.63	5	2	0	3	0	0	0	0	0	0
.CAAGCTGCGGATGAAGATGGAGC.........................................................................................................................................................................................................	23	0	9	0.56	5	5	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................CTCGACTGGAGCCCTTCG..................	18	0	2	0.50	1	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................CCTCGACTGGAGCCCTTCGGC................	21	0	2	0.50	1	0	0	0	1	0	0	0	0	0
..AAGCTGCGGATGAAGATGGAG..........................................................................................................................................................................................................	21	0	9	0.44	4	4	0	0	0	0	0	0	0	0
.....CTGCGGATGAAGATGGAGCGAAAA....................................................................................................................................................................................................	24	0	5	0.40	2	0	0	2	0	0	0	0	0	0
...............AGATGGAGCGAAAAGACTCTGG............................................................................................................................................................................................	22	0	3	0.33	1	1	0	0	0	0	0	0	0	0
..AAGCTGCGGATGAAGATGG............................................................................................................................................................................................................	19	0	9	0.22	2	2	0	0	0	0	0	0	0	0
..AAGCTGCGGATGAAGATGGA...........................................................................................................................................................................................................	20	0	9	0.22	2	2	0	0	0	0	0	0	0	0
......TGCGGATGAAGATGGAGCGAAAAGA..................................................................................................................................................................................................	25	0	5	0.20	1	1	0	0	0	0	0	0	0	0
.......GCGGATGAAGATGGAGCGAAAAG...................................................................................................................................................................................................	23	0	5	0.20	1	1	0	0	0	0	0	0	0	0
....................................................TACCACTACCACAATGCCTTCTACAAGGA................................................................................................................................................	29	0	5	0.20	1	1	0	0	0	0	0	0	0	0
....................................................TACCACTACCACAATGCCTTCTACAA...................................................................................................................................................	26	0	5	0.20	1	1	0	0	0	0	0	0	0	0
......TGCGGATGAAGATGGAGCGA.......................................................................................................................................................................................................	20	0	10	0.20	2	0	2	0	0	0	0	0	0	0
....................................................TACCACTACCACAATGCCTTCTACA....................................................................................................................................................	25	0	5	0.20	1	1	0	0	0	0	0	0	0	0
......TGCGGATGAAGATGGAGCGAAAAG...................................................................................................................................................................................................	24	0	5	0.20	1	0	1	0	0	0	0	0	0	0
.....CTGCGGATGAAGATGGAG..........................................................................................................................................................................................................	18	0	11	0.18	2	2	0	0	0	0	0	0	0	0
...AGCTGCGGATGAAGATGGAA..........................................................................................................................................................................................................	20	1	11	0.18	2	0	0	0	0	2	0	0	0	0
..AAGCTGCGGATGAAGATGGAGCGA.......................................................................................................................................................................................................	24	0	8	0.13	1	1	0	0	0	0	0	0	0	0
.....CTGCGGATGAAGATGGAGCGAAA.....................................................................................................................................................................................................	23	0	8	0.13	1	0	0	0	1	0	0	0	0	0
.....CTGCGGATGAAGATGGAGCGAA......................................................................................................................................................................................................	22	0	8	0.13	1	1	0	0	0	0	0	0	0	0
..AAGCTGCGGATGAAGATGGAGCGAA......................................................................................................................................................................................................	25	0	8	0.13	1	1	0	0	0	0	0	0	0	0
......................................TGAACGTGCCAGCTTACCA........................................................................................................................................................................	19	3	9	0.11	1	1	0	0	0	0	0	0	0	0
.CAAGCTGCGGATGAAGATGG............................................................................................................................................................................................................	20	0	9	0.11	1	1	0	0	0	0	0	0	0	0
...........................................................ACCACAATGCCTTCTACAAGGAC...............................................................................................................................................	23	0	9	0.11	1	1	0	0	0	0	0	0	0	0
..AAGCTGCGGATGAAGATGGC...........................................................................................................................................................................................................	20	1	10	0.10	1	1	0	0	0	0	0	0	0	0
..AAGCTGCGGATGAAGATGGCGC.........................................................................................................................................................................................................	22	1	10	0.10	1	1	0	0	0	0	0	0	0	0
........................................TGTAAGCCAGGTTACCAC.......................................................................................................................................................................	18	3	20	0.10	2	0	0	0	0	0	1	1	0	0
..AAGCTGCGGATGAAGATGGCG..........................................................................................................................................................................................................	21	1	10	0.10	1	0	0	0	1	0	0	0	0	0
.CAAGCTGCGGATGAAGATGGCG..........................................................................................................................................................................................................	22	1	10	0.10	1	1	0	0	0	0	0	0	0	0
.............................................................................................................................AGAGGAAACTGTTTTGTA..................................................................................	18	2	20	0.05	1	0	0	0	0	0	0	0	1	0
.......................................GTGTAAGCCAGGTTACCA........................................................................................................................................................................	18	3	20	0.05	1	0	0	0	0	0	0	0	0	1

##################################################-----------------------------------------------------------------------------------------------------------------------------##################################################
CCAAGCTGCGGATGAAGATGGAGCGAAAAGACTCTGGATGAGTGTGCCAGGTTACCACTACCACAATGCCTTCTACAAGGACAAATGTTTAGTTGGCGTGTATTAACATATAAAGAAATGAATTGAGTGGAAATTGTTTTGTATTAAACCTTATTTTAAACACAATCAAAATCAGTAGTACATCATCCCCTCGACTGGAGCCCTTCGGCCAAGCGTCAGACTTTA
**************************************************....(((((...(((.((((..(((....(((....))))))..))))))).....(((........))).....)))))...(((..((((.(((((......)))))..)))).)))......**************************************************

Read size

# Mismatch

Hit Count

Total Norm

Total

M040
female body

SRR902011
testis

SRR902010
ovaries

V112
male body

SRR902012
CNS imaginal disc

M059
embryo

M062
head

GSM343916
embryo

GSM444067
head

..AAGCTGCGGATGAAGATGGAGC.........................................................................................................................................................................................................

1.33

......................................................................TTCTACAAGGACAAATGTTTAGTTGGC................................................................................................................................

1.00

......TGCGGATGAAGATGGAGCGAAAAGAC.................................................................................................................................................................................................

0.80

..AAGCTGCGGATGAAGATGGAGCG........................................................................................................................................................................................................

0.63

.CAAGCTGCGGATGAAGATGGAGC.........................................................................................................................................................................................................

0.56

.............................................................................................................................................................................................CTCGACTGGAGCCCTTCG..................

0.50

..AAGCTGCGGATGAAGATGGAG..........................................................................................................................................................................................................

0.44

.....CTGCGGATGAAGATGGAGCGAAAA....................................................................................................................................................................................................

0.40

...............AGATGGAGCGAAAAGACTCTGG............................................................................................................................................................................................

0.33

..AAGCTGCGGATGAAGATGG............................................................................................................................................................................................................

0.22

..AAGCTGCGGATGAAGATGGA...........................................................................................................................................................................................................

0.22

......TGCGGATGAAGATGGAGCGAAAAGA..................................................................................................................................................................................................

0.20

.......GCGGATGAAGATGGAGCGAAAAG...................................................................................................................................................................................................

0.20

....................................................TACCACTACCACAATGCCTTCTACAAGGA................................................................................................................................................

0.20

....................................................TACCACTACCACAATGCCTTCTACAA...................................................................................................................................................

0.20

......TGCGGATGAAGATGGAGCGA.......................................................................................................................................................................................................

0.20

....................................................TACCACTACCACAATGCCTTCTACA....................................................................................................................................................

0.20

......TGCGGATGAAGATGGAGCGAAAAG...................................................................................................................................................................................................

0.20

.....CTGCGGATGAAGATGGAG..........................................................................................................................................................................................................

0.18

...AGCTGCGGATGAAGATGGAA..........................................................................................................................................................................................................

0.18

..AAGCTGCGGATGAAGATGGAGCGA.......................................................................................................................................................................................................

0.13

.....CTGCGGATGAAGATGGAGCGAAA.....................................................................................................................................................................................................

0.13

.....CTGCGGATGAAGATGGAGCGAA......................................................................................................................................................................................................

0.13

..AAGCTGCGGATGAAGATGGAGCGAA......................................................................................................................................................................................................

0.13

......................................TGAACGTGCCAGCTTACCA........................................................................................................................................................................

0.11

.CAAGCTGCGGATGAAGATGG............................................................................................................................................................................................................

0.11

...........................................................ACCACAATGCCTTCTACAAGGAC...............................................................................................................................................

0.11

..AAGCTGCGGATGAAGATGGC...........................................................................................................................................................................................................

0.10

..AAGCTGCGGATGAAGATGGCGC.........................................................................................................................................................................................................

0.10

........................................TGTAAGCCAGGTTACCAC.......................................................................................................................................................................

0.10

..AAGCTGCGGATGAAGATGGCG..........................................................................................................................................................................................................

0.10

.CAAGCTGCGGATGAAGATGGCG..........................................................................................................................................................................................................

0.10

.............................................................................................................................AGAGGAAACTGTTTTGTA..................................................................................

0.05

.......................................GTGTAAGCCAGGTTACCA........................................................................................................................................................................

0.05

GGTTCGACGCCTACTTCTACCTCGCTTTTCTGAGACCTACTCACACGGTCCAATGGTGATGGTGTTACGGAAGATGTTCCTGTTTACAAATCAACCGCACATAATTGTATATTTCTTTACTTAACTCACCTTTAACAAAACATAATTTGGAATAAAATTTGTGTTAGTTTTAGTCATCATGTAGTAGGGGAGCTGACCTCGGGAAGCCGGTTCGCAGTCTGAAAT ************************************************....(((((...(((.((((..(((....(((....))))))..))))))).....(((........))).....)))))...(((..((((.(((((......)))))..)))).)))......************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR902011 testis	V112 male body	M040 female body	M022 male body	M059 embryo
..................................................................................................................................................................................ATGTAGTAGGGGAGCTGACCT..........................	21	0	1	2.00	2	0	2	0	0	0
..........................................................................................................................................................................................................GAAGCCGGTTCGCAGTCTGA...	20	0	1	1.00	1	1	0	0	0	0
....................................................................................................................................................................................GTAGTAGGGGAGCTGACCTCG........................	21	0	1	1.00	1	0	1	0	0	0
.........................................................................................................................................................................................................GGAAGCCGGTTCGCAGTCTGA...	21	0	1	1.00	1	1	0	0	0	0
..................................................................ACGGAAGATGTTCCTGTTTACAAAT......................................................................................................................................	25	0	1	1.00	1	1	0	0	0	0
...........................................................................................................................................................................................................AAGCCGGTTCGCAGTCTGAAA.	21	0	1	1.00	1	1	0	0	0	0
.........................................................................................................................................................................................................GGAAGCCGGTTCGCAGTCTG....	20	0	1	1.00	1	0	0	1	0	0
..........................................................................................................................................................................................................GAAGCCGGTTCGCAGTCTGAAA.	22	0	1	1.00	1	1	0	0	0	0
.............................................................................................................................................................................................................GCCGGTTCGCAGTCTGAAAT	20	0	1	1.00	1	1	0	0	0	0
..........................................................................................................................................................................TTGTCATCATGTAGTCGGG....................................	19	2	2	0.50	1	0	0	1	0	0
..........................................................................................................................................................................................................GAAGCCGGTTCGCAGTCTGGAA.	22	1	2	0.50	1	0	0	0	1	0
...........................................CCCGGTCCAATGGTGATGGTG.................................................................................................................................................................	21	1	4	0.25	1	0	0	1	0	0
...TCGACGCCTACTTCTACCTCGCTT......................................................................................................................................................................................................	24	0	8	0.25	2	0	0	2	0	0
....................................................ATGGTGATGGTGTTACGGAA.........................................................................................................................................................	20	0	5	0.20	1	1	0	0	0	0
.......................................CTCACACGGTCCAATGGT........................................................................................................................................................................	18	0	6	0.17	1	0	0	1	0	0
...TCGACGCCTACTTCTACCTCGTTTCT....................................................................................................................................................................................................	26	2	6	0.17	1	0	0	0	0	1
.........CCTACTTCTACCTCGCTTT.....................................................................................................................................................................................................	19	0	8	0.13	1	0	0	1	0	0
.........................................................GATGGTGTTACGGAAGAT......................................................................................................................................................	18	0	9	0.11	1	0	0	1	0	0
...........................................................................................................................................................................................................ATGCCGGTCCGCAGTCTGG...	19	3	13	0.08	1	0	0	1	0	0
..........................................................GTGGTGTCACGGAAGATG.....................................................................................................................................................	18	2	13	0.08	1	0	0	1	0	0
...............................................................................................................................................................TGTGTTAGTACTAGTCATAA..............................................	20	3	14	0.07	1	0	0	1	0	0
................................................................................................................................................................GTGTTTGTTTTAGTTCTCATG............................................	21	3	20	0.05	1	0	0	1	0	0
............................................ACGGTGGAATGGTGCTGGT..................................................................................................................................................................	19	3	20	0.05	1	0	1	0	0	0

GGTTCGACGCCTACTTCTACCTCGCTTTTCTGAGACCTACTCACACGGTCCAATGGTGATGGTGTTACGGAAGATGTTCCTGTTTACAAATCAACCGCACATAATTGTATATTTCTTTACTTAACTCACCTTTAACAAAACATAATTTGGAATAAAATTTGTGTTAGTTTTAGTCATCATGTAGTAGGGGAGCTGACCTCGGGAAGCCGGTTCGCAGTCTGAAAT
**************************************************....(((((...(((.((((..(((....(((....))))))..))))))).....(((........))).....)))))...(((..((((.(((((......)))))..)))).)))......**************************************************

Read size

# Mismatch

Hit Count

Total Norm

Total

SRR902011
testis

V112
male body

M040
female body

M022
male body

M059
embryo

2.00

1.00

..................................................................ACGGAAGATGTTCCTGTTTACAAAT......................................................................................................................................

1.00

..........................................................................................................................................................................TTGTCATCATGTAGTCGGG....................................

0.50

...........................................CCCGGTCCAATGGTGATGGTG.................................................................................................................................................................

0.25

...TCGACGCCTACTTCTACCTCGCTT......................................................................................................................................................................................................

0.25

....................................................ATGGTGATGGTGTTACGGAA.........................................................................................................................................................

0.20

.......................................CTCACACGGTCCAATGGT........................................................................................................................................................................

0.17

...TCGACGCCTACTTCTACCTCGTTTCT....................................................................................................................................................................................................

0.17

.........CCTACTTCTACCTCGCTTT.....................................................................................................................................................................................................

0.13

.........................................................GATGGTGTTACGGAAGAT......................................................................................................................................................

0.11

0.08

..........................................................GTGGTGTCACGGAAGATG.....................................................................................................................................................

0.08

...............................................................................................................................................................TGTGTTAGTACTAGTCATAA..............................................

0.07

................................................................................................................................................................GTGTTTGTTTTAGTTCTCATG............................................

0.05

............................................ACGGTGGAATGGTGCTGGT..................................................................................................................................................................

0.05

Species	Coordinate	ID	Alignment
dp5	2:13620541-13620765 -	dps_523	CCAAGCTGCGGATGAAGATGGAGCGAAAAGACTCTGGATGAGTGTGCCAGGTTACCACTACCACAATGCCTTCTACAAGGACAAATGTTTAGTTGGCGTGTATTAACATATAAAGAAATGAATTGAGTGGAAATTGTTTTGTATTAAACCTTATTTTAAACACAATCAAAATCAGTAGTACATCATCCCCTCGACTGGAGCCCTTCGGCCAAGCGTCAGACTTTA
droPer2	scaffold_0:6703430-6703652 -	dpe_415	CCAAGCTGCGGATGAAGATGGAGCGAAAAGACTCTGGACGAG--TGCCAGGTTACCACTACCAAAATGCCTTCTACAAGGATAAATGTGTAGTTGGCGTGTATTAACATATAAAGAAATGAATTAAGTGGAAATTGTATTGGCTTAAACCTTATTTTAGACACAATCAAAATCAGTAGTACATCATCCCCTCGACTGGAGCCCTTCGGCCAAGCGTCAGACTTTA

Species

Coordinate

Alignment

dp5

2:13620541-13620765 -

dps_523

CCAAGCTGCGGATGAAGATGGAGCGAAAAGACTCTGGATGAGTGTGCCAGGTTACCACTACCACAATGCCTTCTACAAGGACAAATGTTTAGTTGGCGTGTATTAACATATAAAGAAATGAATTGAGTGGAAATTGTTTTGTATTAAACCTTATTTTAAACACAATCAAAATCAGTAGTACATCATCCCCTCGACTGGAGCCCTTCGGCCAAGCGTCAGACTTTA

droPer2

scaffold_0:6703430-6703652 -

dpe_415

CCAAGCTGCGGATGAAGATGGAGCGAAAAGACTCTGGACGAG--TGCCAGGTTACCACTACCAAAATGCCTTCTACAAGGATAAATGTGTAGTTGGCGTGTATTAACATATAAAGAAATGAATTAAGTGGAAATTGTATTGGCTTAAACCTTATTTTAGACACAATCAAAATCAGTAGTACATCATCCCCTCGACTGGAGCCCTTCGGCCAAGCGTCAGACTTTA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

dp5

CCAAGCTGCGGATGAAGATGGAGCGAAAAGACTCTGGATGAGTGTGCCAGGTTACCACTACCACAATGCCTTCTACAAGGACAAATGTTTAGTTGGCGTGTATTAACATATAAAGAAATGAATTGAGTGGAAATTGTTTTGTATTAAACCTTATTTTAAACACAATCAAAATCAGTAGTACATCATCCCCTCGACTGGAGCCCTTCGGCCAAGCGTCAGACTTTA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..AAGCTGCGGATGAAGATGGAGC.........................................................................................................................................................................................................	22	9	1.33	12	0	12	0	0	0	0	0	0	0	0
......................................................................TTCTACAAGGACAAATGTTTAGTTGGC................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......TGCGGATGAAGATGGAGCGAAAAGAC.................................................................................................................................................................................................	26	5	0.80	4	0	0	0	0	0	0	0	0	4	0
..AAGCTGCGGATGAAGATGGAGCG........................................................................................................................................................................................................	23	8	0.63	5	0	2	0	0	0	0	0	3	0	0
.CAAGCTGCGGATGAAGATGGAGC.........................................................................................................................................................................................................	23	9	0.56	5	0	5	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................CTCGACTGGAGCCCTTCG..................	18	2	0.50	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................CCTCGACTGGAGCCCTTCGGC................	21	2	0.50	1	0	0	0	0	0	0	1	0	0	0
..AAGCTGCGGATGAAGATGGAG..........................................................................................................................................................................................................	21	9	0.44	4	0	4	0	0	0	0	0	0	0	0
.....CTGCGGATGAAGATGGAGCGAAAA....................................................................................................................................................................................................	24	5	0.40	2	0	0	0	0	0	0	0	2	0	0
...............AGATGGAGCGAAAAGACTCTGG............................................................................................................................................................................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..AAGCTGCGGATGAAGATGG............................................................................................................................................................................................................	19	9	0.22	2	0	2	0	0	0	0	0	0	0	0
..AAGCTGCGGATGAAGATGGA...........................................................................................................................................................................................................	20	9	0.22	2	0	2	0	0	0	0	0	0	0	0
......TGCGGATGAAGATGGAGCGAAAAGA..................................................................................................................................................................................................	25	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.......GCGGATGAAGATGGAGCGAAAAG...................................................................................................................................................................................................	23	5	0.20	1	0	1	0	0	0	0	0	0	0	0
....................................................TACCACTACCACAATGCCTTCTACAAGGA................................................................................................................................................	29	5	0.20	1	0	1	0	0	0	0	0	0	0	0
....................................................TACCACTACCACAATGCCTTCTACAA...................................................................................................................................................	26	5	0.20	1	0	1	0	0	0	0	0	0	0	0
......TGCGGATGAAGATGGAGCGA.......................................................................................................................................................................................................	20	10	0.20	2	0	0	0	0	0	0	0	0	2	0
....................................................TACCACTACCACAATGCCTTCTACA....................................................................................................................................................	25	5	0.20	1	0	1	0	0	0	0	0	0	0	0
......TGCGGATGAAGATGGAGCGAAAAG...................................................................................................................................................................................................	24	5	0.20	1	0	0	0	0	0	0	0	0	1	0
.....CTGCGGATGAAGATGGAG..........................................................................................................................................................................................................	18	11	0.18	2	0	2	0	0	0	0	0	0	0	0
...AGCTGCGGATGAAGATGGAA..........................................................................................................................................................................................................	20	11	0.18	2	0	0	0	0	0	0	0	0	0	2
..AAGCTGCGGATGAAGATGGAGCGA.......................................................................................................................................................................................................	24	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.....CTGCGGATGAAGATGGAGCGAAA.....................................................................................................................................................................................................	23	8	0.13	1	0	0	0	0	0	0	1	0	0	0
.....CTGCGGATGAAGATGGAGCGAA......................................................................................................................................................................................................	22	8	0.13	1	0	1	0	0	0	0	0	0	0	0
..AAGCTGCGGATGAAGATGGAGCGAA......................................................................................................................................................................................................	25	8	0.13	1	0	1	0	0	0	0	0	0	0	0
.CAAGCTGCGGATGAAGATGG............................................................................................................................................................................................................	20	9	0.11	1	0	1	0	0	0	0	0	0	0	0
...........................................................ACCACAATGCCTTCTACAAGGAC...............................................................................................................................................	23	9	0.11	1	0	1	0	0	0	0	0	0	0	0
..AAGCTGCGGATGAAGATGGC...........................................................................................................................................................................................................	20	10	0.10	1	0	1	0	0	0	0	0	0	0	0

droPer2

CCAAGCTGCGGATGAAGATGGAGCGAAAAGACTCTGGACGAG--TGCCAGGTTACCACTACCAAAATGCCTTCTACAAGGATAAATGTGTAGTTGGCGTGTATTAACATATAAAGAAATGAATTAAGTGGAAATTGTATTGGCTTAAACCTTATTTTAGACACAATCAAAATCAGTAGTACATCATCCCCTCGACTGGAGCCCTTCGGCCAAGCGTCAGACTTTA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
........CGGATGAAGATGGAGCGAAAAGA..................................................................................................................................................................................................	23	5	7.00	35	0	17	1	0	0	17
........CGGATGAAGATGGAGCGAAAAGAC.................................................................................................................................................................................................	24	5	4.80	24	1	20	0	0	0	3
........CGGATGAAGATGGAGCGAAAAGACT................................................................................................................................................................................................	25	4	3.00	12	0	9	0	0	0	3
........CGGATGAAGATGGAGCGAAAAG...................................................................................................................................................................................................	22	5	1.40	7	0	2	0	0	0	5
........CGGATGAAGATGGAGCGAAAAGACTC...............................................................................................................................................................................................	26	3	1.33	4	0	4	0	0	0	0
........................................................................................................................................TATTGGCTTAAACCTTATTTTAGACA...............................................................	26	1	1.00	1	0	1	0	0	0	0
.........GGATGAAGATGGAGCGAAAAGA..................................................................................................................................................................................................	22	5	0.40	2	0	2	0	0	0	0
.........GGATGAAGATGGAGCGAAAAG...................................................................................................................................................................................................	21	5	0.40	2	0	2	0	0	0	0
..........GATGAAGATGGAGCGAAAAGAC.................................................................................................................................................................................................	22	5	0.40	2	0	2	0	0	0	0
........CGGATGAAGATGGAGCGAAAAGAA.................................................................................................................................................................................................	24	5	0.40	2	1	1	0	0	0	0
......TGCGGATGAAGATGGAGCGAAAAGA..................................................................................................................................................................................................	25	5	0.40	2	0	0	0	0	0	2
.................ATGGAGCGAAAAGACTCTGGAC..........................................................................................................................................................................................	22	3	0.33	1	0	1	0	0	0	0
..................TGGAGCGAAAAGACTCTGGACGAG--TG...................................................................................................................................................................................	26	3	0.33	1	0	1	0	0	0	0
..........GATGAAGATGGAGCGAAAAGACTCT..............................................................................................................................................................................................	25	3	0.33	1	0	0	0	0	0	1
.........GGATGAAGATGGAGCGAAAAGACTC...............................................................................................................................................................................................	25	3	0.33	1	0	1	0	0	0	0
........CGGATGAAGATGGAGCGAAAAGACTCT..............................................................................................................................................................................................	27	3	0.33	1	0	1	0	0	0	0
..........GATGAAGATGGAGCGAAAAGACTA...............................................................................................................................................................................................	24	4	0.25	1	0	1	0	0	0	0
.........GGATGAAGATGGAGCGAAAAGACT................................................................................................................................................................................................	24	4	0.25	1	0	1	0	0	0	0
........CGGATGAAGATGGAGCGAAAA....................................................................................................................................................................................................	21	5	0.20	1	0	1	0	0	0	0
......TGCGGATGAAGATGGAGCGAAAAGAC.................................................................................................................................................................................................	26	5	0.20	1	0	1	0	0	0	0
.........GGATGAAGATGGAGCGAAAAGAC.................................................................................................................................................................................................	23	5	0.20	1	0	1	0	0	0	0
......TGCGGATGAAGATGGAGCGAAA.....................................................................................................................................................................................................	22	16	0.06	1	0	1	0	0	0	0
.CAAGCTGCGGATGAAGATGGA...........................................................................................................................................................................................................	21	17	0.06	1	0	0	0	0	0	1
.CAAGCTGCGGATGAAGATGGAG..........................................................................................................................................................................................................	22	17	0.06	1	0	0	0	0	0	1
........CGGATGAAGATGGAGCGAA......................................................................................................................................................................................................	19	17	0.06	1	0	1	0	0	0	0
....GCTGCGGATGAAGATGGAGC.........................................................................................................................................................................................................	20	18	0.06	1	0	1	0	0	0	0
..AAGCTGCGGATGAAGATGGAGC.........................................................................................................................................................................................................	22	18	0.06	1	0	0	0	0	0	1
.CAAGCTGCGGATGAAGATT.............................................................................................................................................................................................................	19	18	0.06	1	0	0	0	0	0	1

dps_523

2:13620591-13620715 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-15.1	-14.8	-14.7