ID:

dps_476

 Coordinate:

2:11324199-11324349 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.3 -8.3 -7.9 -7.9

Flybase annnotation

exon [Dpse\GA20456:10]; five_prime_UTR [Dpse\GA20456-u5]; intron [Dpse\GA20456-in]; five_prime_UTR [Dpse\GA20456-u5]; exon [Dpse\GA20456:11]; intron [Dpse\GA20456-in]

No Repeatable elements found

Sense Strand Reads

------------------------------------------------------------------------------------------------###########################################################################################################################################################
TTTTTTTTTTTGTTCCCGAACATGGACGACTACATCACATTTCATGTTTTTCCATTTAATTTATGTGTTTTGTTGTTCTCTTTCGGTTTATTGCAGGATTTCAATTGCTCGATTTCAATATGAAGCGCCAAAAATGATTGCAGCACCGTTTGCATCGTCTTCGTCTTGAAAAAGGTTTTTTTCCCATTGATTTAATTAAAGCCATCGAAAGCGTGCGGTCGAAAGGGGACCAACCAAGACATAGCAAGAAC
**********************************************************************************************************************************..........................(((........((((((....)))))).....))).*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 M022
male body		 GSM343916
embryo
 M059
embryo
 GSM444067
head
 M062
head
.........................................................................................................................................................................................................................GTCGAAAGGGGAACAGCCCAGAC........... 23 3 1 116.00 116 96 9 8 0 0 1 2
.........................................................................................................................................................................................................................GTCGAAAGGGGAACAGCCCAGA............ 22 3 4 47.00 188 155 25 7 0 1 0 0
...........................................................................................................................................................................................................................CGAAAGGGGAACAGCCCAGAC........... 21 3 6 13.83 83 71 5 0 0 0 5 2
..........................................................................................................................................................................................................................TCGAAAGGGGAACAGCCCAGAC........... 22 3 3 2.67 8 8 0 0 0 0 0 0
..................................................................................................................................AAAATGATTGCAGCACCGTTTGCATC............................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................................................................................................................................................GTCGAAAGGGGAACACCCCAGAC........... 23 3 1 2.00 2 1 1 0 0 0 0 0
..........................................................................................................................................................................................................CATCGAAAGCGTGCGGTC............................... 18 0 1 2.00 2 2 0 0 0 0 0 0
.......................................................................................................................................................................................................................CCGTCGAAAGGGGAACAGCC................ 20 3 8 2.00 16 16 0 0 0 0 0 0
............................................................................................................................................................................AGGTTTTTTTCCCATTGATT........................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................AGCGTGCGGTCGAAAGGGGACCAC.................. 24 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................TTAAAGCCATCGAAAGCGTGCGGTC............................... 25 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................CGTCTTCGTCTTGAAAAAGGT........................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0
....................................................................................................................................................................................................TAAAGCCATCGAAAGCGTGCGGTCGAAA........................... 28 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................CGTCTTGAAAAAGGTTTTTTTCCCATT............................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................GAAAGGGGACCAACCAAGACATAGC...... 25 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................AATGATTGCAGCACCGTTTG................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0
...................................................................................................................................................................................................................CGTGCGGTCGAAAGGGGACC.................... 20 0 1 1.00 1 0 0 1 0 0 0 0
............................................................................................................TCGATTTCAATATGAAGCGCC.......................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................AGCGTGCGGTCGAAAGGG........................ 18 0 1 1.00 1 0 0 0 1 0 0 0
.............................................................................................................................................AGAAACGTTTGCATCGTCTTC......................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0 0
.....................................................................................................................................................................................................AAAGCCATCGAAAGCGTGCGGTC............................... 23 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................TTTTTTTCCCATTGATTTAATTAAAGC................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................CAACCAAGACATAGCAAGA.. 19 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................AATGATTGCAGCACCGTTTGC.................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0
................................................................................................................................................................................TTTTTTCCCATTGATTTAATTAAAGC................................................. 26 0 1 1.00 1 0 0 0 0 1 0 0
.................................................................................................................................................................................................................AGCGTGCGGTCGAAAGGGGACC.................... 22 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................GAAGCGCCAAAAATGATCGCA............................................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0 0
.......................................................................................................................ATGAAGCGCCAAAAATGATT................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0
.................................................................................................................................................................................................................TGCGTGCGGTCGAAAGGGGAC..................... 21 1 1 1.00 1 0 0 0 0 1 0 0
......................................................................................................................................................................................................AAGCCATCGAAAGCGTGCGGTC............................... 22 0 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................................................................AGCACCGTTTGCATCGTCTTCGTCTT.................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0
.........................................................................................................................................................................................................................GGCGAAAGGGGACCAGCCCAGA............ 22 3 2 0.50 1 0 0 0 0 0 0 1
.....................................................................................................CAGTTGCTCGATTTGGATATG................................................................................................................................. 21 3 5 0.20 1 1 0 0 0 0 0 0
..................................................................................................................................AAAGTGATTGCAGAACCG....................................................................................................... 18 2 11 0.09 1 1 0 0 0 0 0 0
.....................................................................................................................................................TTGCATCGTCTTCGCGTTGT.................................................................................. 20 3 12 0.08 1 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................TTCGGACGGAAGGGGACCA................... 19 3 12 0.08 1 0 0 1 0 0 0 0
........................................................................................................................................................................................................................................ACCAAGAGATAGCAAGAT. 18 2 13 0.08 1 0 0 0 1 0 0 0
.........................................................................................................................................................GCCGTCTTCTTCTTGAAAAA.............................................................................. 20 3 15 0.07 1 1 0 0 0 0 0 0
..........................................................................................................................................................TCGTCTTCGTTTTCAAAAAA............................................................................. 20 3 20 0.05 1 1 0 0 0 0 0 0

Anti-sense strand reads

AAAAAAAAAAACAAGGGCTTGTACCTGCTGATGTAGTGTAAAGTACAAAAAGGTAAATTAAATACACAAAACAACAAGAGAAAGCCAAATAACGTCCTAAAGTTAACGAGCTAAAGTTATACTTCGCGGTTTTTACTAACGTCGTGGCAAACGTAGCAGAAGCAGAACTTTTTCCAAAAAAAGGGTAACTAAATTAATTTCGGTAGCTTTCGCACGCCAGCTTTCCCCTGGTTGGTTCTGTATCGTTCTTG
***********************************************************..........................(((........((((((....)))))).....))).********************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
.................................................................................................................AAGTTATACTTCGCGGTTTTT..................................................................................................................... 21 0 1 1.00 1 1
AAAAAAAAAAAAAAGGGCTTGTT.................................................................................................................................................................................................................................... 23 2 4 0.25 1 1
AAAAAAAACAACAAGGGCT........................................................................................................................................................................................................................................ 19 1 4 0.25 1 1
..AAAAAAAAGCTAGGGCTGGT..................................................................................................................................................................................................................................... 20 3 17 0.06 1 1
...............................................................................................................................................................................AAAAAAAGGGTGACTATGTT........................................................ 20 3 20 0.05 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:11324149-11324399 - dps_476 TTTTTTTTTT-TGT--------------TCCC-GAA--CATGGACGA--CTACATCACATTTCATGTTTTTCCATTTAATTTA-------------TGTGT---TT------------------------------------------------------TGTTGT------T-CTCTTTCGG--TTTATTGCAGGATTTCAATTGCTCGATTTCAATATGAAGCGCCAAAAATGATTGCAGCACCGTTTGCATCGTCTTCGTCTTGAAAAAGGTTTTTTTCCCATTGATTTA-ATTAAAGCCATCGAAAGCGTGCG-GTC-----GAAAGGG---GACCAACCA-------------------AGACATAGCA--AG----AAC---
droPer2 scaffold_0:9191583-9191829 + TTTTTT-----TGT--------------TCCC-GAA--CATGGACGA--CTACATCACATTTCATGTTTTTCCATTTAATTTA-------------TGTGT---TT------------------------------------------------------TGTTGT------T-CTCTTTCGGCTT--ATTGCAGGATTTCAATTGCTCGATTTCAATATGAAGCGCCAAAAATGATTGCAGCACCGTTTGCATCGTCTTCGTCTTGAAAAAGGTTTTTTTCCCATTGATTTA-ATTAAAGCCATCGAAAGCGTGCG-GTC-----GAAAGGG---GACCAACCA-------------------AGACATAGCA--AG----AAC---
droWil2 scf2_1100000004902:11582065-11582290 + TTTTTTTT---TGT--------------TTTA-----------ACGACACTACATCACATTTCATGT-TTTCCATTTAATTTA-------------ATTAA---TT-T----------------------------------------------------TC-TTT------T-TTTG-T--GCTT---TTGCAGGATT-------CTCGATTTCAATATGAAGCGGCAAAAATGATTGCAA---CGTTTGCATCGT---CGTCTTGAA-AAGGTTTTTTTTCCATTGATTTA-ATTAAAGCCACCGCAAACGGTTTGGCT-----AAAAAGATAG---TGACC-------------------------TAGCT--AGAAGAGGCCGT
droVir3 scaffold_12855:3970345-3970598 - TTT-------------------------------------------------------------------TCCATTTAATTTGCAAATTGAATTAATGTATCTCTATGTCTGTGTTTGTTTTATTTTTTCTGGTATATGTAA--------------T-AAAT-TCT--CTTTCTTTAAT---TTTGTAATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAA---TGTGTGAATCGT---CGTCTTGAA-AAGGTTTTGTTTCCGTTGATTGAAATTAAAGCAACTGCAAC-ACGCA-AC-----------------------GAAGAAGCAATTGCGGCACAAAAACAAAATAAACA----GAC---
droMoj3 scaffold_6540:8277733-8277914 - TGTATTATTTATATA--------------T-------------------AT------AAATACATAT-GTG---------------------------TGT------------------------------------------ATCTATATATGTATTAATGGTGTCTCGCTTATTTATT--GTG-TACTTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAA---TGTGTGAATCGT---CGTCTTGAAAAAGGTTTTGTTTCCGTTGATTGAAATTAAAGCAACTG---------------------------------------------------------------------------------
droGri2 scaffold_14906:6591533-6591778 - GTTTGTAC--------------------TT-------------------TGACATCAGATTTCATGTATTTCCATTTAATTTG-------------CAAGT---CG--------TCTGTTTTTTCTTTTCTGATATATGTTGTATATATATATGTAT-AATC-TCT------T-TTTCT---CTTGTCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAA---TGTGTGCATCGT---CGTCTTGAA-AAGGTTTTGTTTCCGTTGATTAAAATTAAAGCAACTGCAACACGCAA-CGC-------------------AACGAAGAAACA------------AT------------------T---
droAna3 scaffold_13340:9334801-9335021 - ATTTTTTTTA-TGT--------------TA------CTCTTGGGCGA--GTACATCACATTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TT------------------------------------------------------TA-TGT------T-ATTGTT--GCTTTCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AACGTTTTCGTTCCATTGATTTA-ATTAGAGCCACTGAAAGCGGTTG-ACGAC-------------GAC-GACGA-------------------CGACG-------AC----GAC---
droBip1 scf7180000396712:2955789-2955960 - GGC------------------------------------------GA--CTACATCACATTTCATGTTTTTCCATTTAATTTAA------------TGTGT---TT------------------------------------------------------TG--GT------T-ATTGTT--GCTTTCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AACGTTTTTTT--CATTGATTTA-ATTAGAGCCACGGCAAGCG---------------------------------------------------------------------------
droKik1 scf7180000302634:815064-815280 + TTTTTTTTTG-TGC--------------TCTC--------TTAACGA--CAACATCACATTTCATGT-TTTCCATTTAATTTA-------------TATGT---TT------------------------------------------------------CT-CGT------C-ATTGTT--GCTTTCATTGCAGGATT-------CTCGATGTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATAGTAT-AATCTTCAA-ACGGTTTTTTT--CATTGATTTA-A---------CTTAAAACGGTCG-ACCAGCCATCAGTAAGAG---CAGTGA----------------------------A--AG----GGC---
droFic1 scf7180000453800:1308222-1308427 + TTTTTGT---------------------TT-------------------CTACATCACATTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TA------------------------------------------------------TG-TGT------T-TTTGTT--GTTTTCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACTGAAAGCGGTTG-GCCATCCAGAGAAGCGAG---CGACCA-------------------GG------------------G---
droEle1 scf7180000486474:142515-142702 + TTTTGCTTTT-TGT--------------TT-------------------CTACATCGCATTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TA------------------------------------------------------TT-TGT------T-ATTGTT--GCTTTCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACTGAAAGCGGTTG-GCC-------------------------------------------------------------------
droRho1 scf7180000778053:56169-56377 + TTTTTTTTTT-TC------------------------------------TTACATCGCATTTCATGT-TTTCCATTTAATTTA-------------TGTAT---TA------------------------------------------------------TG-TGT------T-ATTGTT--GCTTTCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACTGAAAGCGGTTG-GCCTGCCAAAAAAAAGAG---CAACCA-------------------GG------------------G---
droBia1 scf7180000299102:1109301-1109506 - TGGGTTTTTT-TGT--------------TT-------------------CTACATCACATTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TA------------------------------------------------------TG-TGT------T-TTTGTT--GCTTTCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACCGAAAGCGGTTG-GCCAGCCAGAAAAACGAG---CA-------------------------------------------A---
droTak1 scf7180000415653:18287-18489 - TTTCTTTTTT-TGT--------------TT-------------------CGACATCACATTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TATG----------------------------------------------------TG-TGT------T-TTTGTT--GCTTTCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACCGAAAGCGGTTG-GCCAGCCAGCAA-----------------------------------------------A----AAC---
droEug1 scf7180000409802:1182366-1182574 - TTGTTTTT--ATATATATATATATATATTT-------------------CTACATCACATTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TA---------------------------------------------------------------------TTGTT--GGTTTCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACTGAAAGCGGTTG-GCCAGCCAA--------------------------------------GAAA-------AA----AAA---
dm3 chr3R:8844980-8845179 + TTTTCTT-CT-TGT--------------TTTTG---GT-----------CTACATCATGTTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TA------------------------------------------------------TG-TGT------T-CTTGTT--GCTTCCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACTGAAAGCGGTTG-GCCAGCCAGAA-----------------------------------------------------------
droSim2 3r:12320001-12320201 - TTCCCCCTCT-TGT--------------TTTTA---GT-----------CTACATCATGTTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TA------------------------------------------------------TG-TGT------T-CTTGTT--GCTTCCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACTGAAAGCGGTTG-GCCAGCCAGAA-----------------------------------------------------------
droSec2 scaffold_0:13151350-13151550 - TTTTTTTTCT-TGT--------------TTTTG---GT-----------CTACATCATGTTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TA------------------------------------------------------TG-TGT------T-CTTGTT--GCTTCCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACTGAAAGCGGTTG-GCCAGCCAGAA-----------------------------------------------------------
droYak3 3R:13140233-13140458 + TTTTTTTTTA-TGTA-------------TTTTA---GT-----------CTACATCATGTTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TA------------------------------------------------------TG-TGT------T-TTCGTT--GCTTCCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACTGAAAGCGGTTG-GCCAGCCAGAAAAACGAGGACCGACCA-------------------GG------------GAT-AAA---
droEre2 scaffold_4770:12803427-12803628 - TTTTTTTTT-------------------TTTAA---GT-----------CTACATCATGTTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TA------------------------------------------------------TG-TGT------T-TTTGTT--GCTTCCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACTGAAAGCGGTTG-GCCAGCCAGAAA-----------------------------------------------A----AAC---

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TTTTTTTTTT-TGT--------------TCCC-GAA--CATGGACGA--CTACATCACATTTCATGTTTTTCCATTTAATTTA-------------TGTGT---TT------------------------------------------------------TGTTGT------T-CTCTTTCGG--TTTATTGCAGGATTTCAATTGCTCGATTTCAATATGAAGCGCCAAAAATGATTGCAGCACCGTTTGCATCGTCTTCGTCTTGAAAAAGGTTTTTTTCCCATTGATTTA-ATTAAAGCCATCGAAAGCGTGCG-GTC-----GAAAGGG---GACCAACCA-------------------AGACATAGCA--AG----AAC---SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................AAAATGATTGCAGCACCGTTTGCATC.....................................................................................................................................2612.0020200000000
..............................................................................................................................................................................................................................................................................................................CATCGAAAGCGTGCG-GTC-----..............................................................1812.0020200000000
...............................................................................................................................................................................................................................................................................AGGTTTTTTTCCCATTGATT.................................................................................................2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................AGCGTGCG-GTC-----GAAAGGG---GACCAC..............................................2411.0010100000000
.......................................................................................................................................................................................................................................................................................................TTAAAGCCATCGAAAGCGTGCG-GTC-----..............................................................2511.0010100000000
..............................................................................................................................................................................................................................................................CGTCTTCGTCTTGAAAAAGGT.................................................................................................................2111.0010000100000
........................................................................................................................................................................................................................................................................................................TAAAGCCATCGAAAGCGTGCG-GTC-----GAAA..........................................................2811.0010100000000
....................................................................................................................................................................................................................................................................CGTCTTGAAAAAGGTTTTTTTCCCATT.....................................................................................................2711.0010100000000
......................................................................................................................................................................................................................................................................................................................................GAAAGGG---GACCAACCA-------------------AGACATAGC...............2511.0010100000000
.......................................................................................................................................................................................................................................AATGATTGCAGCACCGTTTG.........................................................................................................................................2011.0010000010000
.......................................................................................................................................................................................................................................................................................................................CGTGCG-GTC-----GAAAGGG---GACC................................................2011.0011000000000
...............................................................................................................................................................................................................TCGATTTCAATATGAAGCGCC................................................................................................................................................................2111.0010100000000
.....................................................................................................................................................................................................................................................................................................................AGCGTGCG-GTC-----GAAAGGG---....................................................1811.0010000100000
.........................................................................................................................................................................................................................................................................................................AAAGCCATCGAAAGCGTGCG-GTC-----..............................................................2311.0010100000000
..................................................................................................................................................................................................................................................................................TTTTTTTCCCATTGATTTA-ATTAAAGC......................................................................................2711.0010100000000
...................................................................................................................................................................................................................................................................................................................................................CAACCA-------------------AGACATAGCA--AG----A.....1911.0010100000000
.......................................................................................................................................................................................................................................AATGATTGCAGCACCGTTTGC........................................................................................................................................2111.0010000100000
...................................................................................................................................................................................................................................................................................TTTTTTCCCATTGATTTA-ATTAAAGC......................................................................................2611.0010010000000
.....................................................................................................................................................................................................................................................................................................................AGCGTGCG-GTC-----GAAAGGG---GACC................................................2211.0010100000000
..........................................................................................................................................................................................................................ATGAAGCGCCAAAAATGATT......................................................................................................................................................2011.0010000001000
..........................................................................................................................................................................................................................................................................................................AAGCCATCGAAAGCGTGCG-GTC-----..............................................................2211.0010000001000
................................................................................................................................................................................................................................................AGCACCGTTTGCATCGTCTTCGTCTT..........................................................................................................................2611.0010010000000
droPer2
TTTTTT-----TGT--------------TCCC-GAA--CATGGACGA--CTACATCACATTTCATGTTTTTCCATTTAATTTA-------------TGTGT---TT------------------------------------------------------TGTTGT------T-CTCTTTCGGCTT--ATTGCAGGATTTCAATTGCTCGATTTCAATATGAAGCGCCAAAAATGATTGCAGCACCGTTTGCATCGTCTTCGTCTTGAAAAAGGTTTTTTTCCCATTGATTTA-ATTAAAGCCATCGAAAGCGTGCG-GTC-----GAAAGGG---GACCAACCA-------------------AGACATAGCA--AG----AAC---SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................AGCACCGTTTGCATCGTCTTC...............................................................................................................................21111.00111100000
................................................................................................................................................................................................................................................AGCACCGTTTGCATCGTCTTCGTCTT..........................................................................................................................2616.006510000
.................................................................................................................................................................................................................................................GCACCGTTTGCATCGTCTTCGTCTTG.........................................................................................................................2613.003300000
................................................................................................................................................................................................................................................AGCACCGTTTGCATCGTCTTCGT.............................................................................................................................2313.003300000
.........................................................................................................................................................................................T--ATTGCAGGATTTCAATTGCTC...................................................................................................................................................................................2213.003300000
................................................................................................................................................................................................................................................AGCACCGTTTGCATCGTCTTCGTCTTG.........................................................................................................................2713.003300000
.....................................................................................................................................................................................................................................................................................................................AGCGTGCG-GTC-----GAAAGGG---GAC.................................................2113.003210000
..............................................................................................................................................................................................................................................................................................................CATCGAAAGCGTGCG-GTC-----..............................................................1813.003300000
......................................................................................................................................................................................................................................................GTTTGCATCGTCTTCGTCTTGA........................................................................................................................2212.002200000
....................................................................................................................................................................................................................................................................................................................................................AACCA-------------------AGACATAGCA--AG----AAC---2011.001100000
.................................................................................................................................................................................................................................................GCACCGTTTGCATCGTCTTCGT.............................................................................................................................2211.001100000
........................................................................................................................................................................................................................................................TTGCATCGTCTTCGTCTTGA........................................................................................................................2011.001100000
...............................................................................................................................................................................................................................................................................................................ATCGAAAGCGTGCG-GTC-----GAAAGGG---GACC................................................2811.001100000
.................................................................................................................................................................................................................................................GCACCGTTTGCATCGTCTTC...............................................................................................................................2011.001010000
........................................................................................................................................................................................................................................................TTGCATCGTCTTCGTCTT..........................................................................................................................1811.001100000
.................................................................................................................................................................................................................................................GCACCGTTTGCATCGTCTTCGTCTT..........................................................................................................................2511.001100000
..................................................................................................................................................................................................................................................CACCGTTTGCATCGTCTTC...............................................................................................................................1911.001100000
............................................................................................................................................................................................................................................................................................................GCCATCGAAAGCGTGCG-GTC-----GAAAGGG---....................................................2711.001100000
................................................................................................................................................................................................................................................AGCACCGTTTGCATCGTCTT................................................................................................................................2011.001100000
.....................................................................................................................................................................................................................................................................................................................AGCGTGCG-GTC-----GAAAGGG---....................................................1811.001010000
...........................................................................................................................................................................................................................................................................................................AGCCATCGAAAGCGTGCG-GTC-----..............................................................2111.001010000
................................................................................................................................................................................................................................................AGCACCGTTTGCATCGTCTTCGTCTG..........................................................................................................................2611.001100000
..................................................................................................................................................................................................................................................CACCGTTTGCATCGTCTTCGTCTTGA........................................................................................................................2611.001100000
......................................................................................................................................................................................................................................................GTTTGCATCGTCTTCGTCT...........................................................................................................................1911.001100000
................................................................................................................................................................................................................................................AGCACCGTTTGCATCGTCTTCGG.............................................................................................................................2311.001100000
...........................................................................................................................................................................................................................................................CATCGTCTTCGTCTTGAAA......................................................................................................................1911.001100000
........................................................................................................................................................................................................................ATATGAAGCGCCAAAAATGATTGC....................................................................................................................................................2411.001000001
................................................................................................................................................................................................................................................................................................................................C-----GAAAGGG---GACCAACCA-------------------AGAC....................2111.001100000
......................................................................................................................................................................................................................................................................................................ATTAAAGCCATCGAAAGCGTGCG-GTC-----..............................................................2611.001010000
........................................................................................................................................................................................................................................................TTGCATCGTCTTCGTCTTGC........................................................................................................................2011.001100000
droWil2
TTTTTTTT---TGT--------------TTTA-----------ACGACACTACATCACATTTCATGT-TTTCCATTTAATTTA-------------ATTAA---TT-T----------------------------------------------------TC-TTT------T-TTTG-T--GCTT---TTGCAGGATT-------CTCGATTTCAATATGAAGCGGCAAAAATGATTGCAA---CGTTTGCATCGT---CGTCTTGAA-AAGGTTTTTTTTCCATTGATTTA-ATTAAAGCCACCGCAAACGGTTTGGCT-----AAAAAGATAG---TGACC-------------------------TAGCT--AGAAGAGGCCGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................................................................................................................ATCGT---CGTCTTGAA-AAGGT.................................................................................................................1912.00201100
.....................................................................................................................................................................................................................................AAAATGATTGCAA---CGTTTGCATCGT---CGTC............................................................................................................................2912.00220000
..............................................................................................................................................................................................................CTCGATTTCAATATGAAGCGGCAAAAA...........................................................................................................................................................2712.00202000
.......................................................................................................................................................................................................................................AATGATTGCAA---CGTTTGC........................................................................................................................................1811.00100010
......................................................................................................................................................................................................................................AAATGATTGCAA---CGTTTGCATC.....................................................................................................................................2211.00100100
..............................................................................................................................................................................................................................................................................................................................................AG---TGACC-------------------------TAGCT--AGAAGAGGCC..2211.00100100
...............................................................................................................................................................................................................................................................................................................................................G---TGACC-------------------------TAGCT--AGAAGAGGCC..2111.00100010
...............................................................................................................................................................................................................................GCGGCAAAAATGATTGCAA---CGTTTG.........................................................................................................................................2511.00100010
........................................................................................................................................................................................................................ATATGAAGCGGCAAAAATGATTGC....................................................................................................................................................2411.00100100
............................................................................................................................................................................................................................................................................................................................................ATAG---TGACC-------------------------TAGCT--AGAAGAG.....2111.00100100
.............................................................................................................................................................................................................................................................................................................................................TAG---TGACC-------------------------TAGCT--AGAAGAGGCC..2311.00100100
...................................................................................................................................................................................................GATT-------CTCGATTTCAATATGAAGCGGC................................................................................................................................................................2611.00100010
...................................................................................................................................................................................................................................................................................................................CAAACGGTTTGGCT-----AAAA..........................................................1811.00100010
.......................................................................................................................................................................................................................................AATGATTGCAA---CGTTTGCATCGT---C...............................................................................................................................2411.00100010
..........................................................................................................................................................................................................................................................................................................................TTTGGCT-----AAAAAGATAG---TGACC-------------------------TAG................2511.00101000
...............................................................................................................................................................................................................................................................................................................................................G---TGACC-------------------------TAGCT--AGAAGAGGC...2011.00100100
.................................................................................................................................................................................................................................GGCAAAAATGATTGCAA---CGTTTGCATC.....................................................................................................................................2711.00100010
........................................................................................................................................................................................................................................................TTGCATCGT---CGTCTTGAA-AA....................................................................................................................2011.00110000
..................................................................................................................................................................................................................ATTTCAATATGAAGCGGCA...............................................................................................................................................................1911.00110000
..............................................................................................................................................................................................................................................................................................................CACCGCAAACGGTTTGGCT-----AAA...........................................................2211.00100010
................................................................................................................................................................................................................................................AA---CGTTTGCATCGT---CGTCTTGA........................................................................................................................2211.00110000
..............................................................................................................................................................................................................................................GCAA---CGTTTGCATCGT---CGTC............................................................................................................................2011.00110000
droVir3
TTT-------------------------------------------------------------------TCCATTTAATTTGCAAATTGAATTAATGTATCTCTATGTCTGTGTTTGTTTTATTTTTTCTGGTATATGTAA--------------T-AAAT-TCT--CTTTCTTTAAT---TTTGTAATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAA---TGTGTGAATCGT---CGTCTTGAA-AAGGTTTTGTTTCCGTTGATTGAAATTAAAGCAACTGCAAC-ACGCA-AC-----------------------GAAGAAGCAATTGCGGCACAAAAACAAAATAAACA----GAC---SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................GCAACTGCAAC-ACGCA-AC-----------------------GAAGAAG......................................2513.003000000000000000000000000000000000000000000000000000000000000003
........................................................................................................................................................................................................................................................GTGAATCGT---CGTCTTGAA-AAGGTT................................................................................................................2412.002000000002000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................GAATCGT---CGTCTTGAA-AAGGTTT...............................................................................................................2312.002000001000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................GCCAAAAATGATTGCAA---TGTGT..........................................................................................................................................2212.002002000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................CGCCAAAAATGATTGCAA---TGTGT..........................................................................................................................................2312.002000000000000000000000110000000000000000000000000000000000000000
....................................................................................................................................................................................................................................AAAAATGATTGCAA---TGTGT..........................................................................................................................................1912.002001000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................................................................................................................GTTTTGTTTCCGTTGATTGAA..............................................................................................2112.002020000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TGAATCGT---CGTCTTGAA-AAGGTT................................................................................................................2312.002000000010100000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................AGGATT-------CTCGATTTCAATA.........................................................................................................................................................................1911.001000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GCA-AC-----------------------GAAGAAGCAATTGCGGC............................2211.001000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................ATCGT---CGTCTTGAA-AAGGTT................................................................................................................2011.001000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................................................................................................................................................................................................................A-AC-----------------------GAAGAAGCAATTGCGGC............................2011.001000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................GCCAAAAATGATTGCAA---TGTGTGAATC.....................................................................................................................................2711.001000000000000010000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AGCAACTGCAAC-ACGCA-AC-----------------------G............................................2011.001000000000000000000100000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................AAATGATTGCAA---TGTGTGAA.......................................................................................................................................2011.001000000000000000000000000000000000000000100000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................AGCAATTGCGGCACAAAAACAAA.................2311.001000000000000001000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................AACTGCAAC-ACGCA-AC-----------------------GAAGAAGC.....................................2411.001000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................TGAATCGT---CGTCTTGAA-AAGGT.................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................A-AC-----------------------GAAGAAGCAATTGCGGCAC..........................2211.001000000000000000000000100000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TGTTTCCGTTGATTGAAATTAAAGCAAC...................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................GTAATTGCAGGATT-------CTCGATTTCAAT..........................................................................................................................................................................2611.001000000000000001000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................GCGCCAAAAATGATTGCAA---TGTGT..........................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GTTTTGTTTCCGTTG....................................................................................................1521.002000000000000000000000000000000000000000000000000000000000000002
........................................................................................................................................................................................................................................................................................................TAAAGCAACTGCAAC-ACGCA-AC-----------------------G............................................2311.001000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................A-AC-----------------------GAAGAAGCAATTGCGGCACAAAAAC....................2811.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................GTCTTGAA-AAGGTTTTGTTTCC........................................................................................................2211.001000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................ATCGT---CGTCTTGAA-AAGGTTTTGTTTCC........................................................................................................2811.001000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CAACTGCAAC-ACGCA-AC-----------------------GAAGAAGC.....................................2511.001000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................TGAA-AAGGTTTTGTTTCCGTTGATT.................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................GAATCGT---CGTCTTGAA-AAGGTC................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................GTGAATCGT---CGTCTTGAA-AAGGTTTTGTTTCCGTTGATT.................................................................................................3911.001000000000000000000000000000000000000000000000000000000000010000
.......................................................................................................................................................................................................................................................................CTTGAA-AAGGTTTTGTTTCCGTTGATT.................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................ATCGT---CGTCTTGAA-AAGGTTT...............................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................AACTGCAAC-ACGCA-AC-----------------------GAAGAAGCAAT..................................2711.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CTTGAA-AAGGTTTTGTTTCCGTTGAC..................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................GAAGAAGCAATTGCGGCACAAAAACAAA.................2811.001000000000000001000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................TTCCGTTGATTGAAATTAAA........................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CTGCAAC-ACGCA-AC-----------------------GAAGAAGC.....................................2211.001000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ATTAAAGCAACTGCAAC-ACGCA-AC-----------------------G............................................2511.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................GTTTCCGTTGATTGAAATTAAAG.......................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................GAATCGT---CGTCTTGAA-AAGGTT................................................................................................................2211.001000000000000000000010000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GCAATTGCGGCACAAAAACAA..................2111.001000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................AAAAATGATTGCAA---TGTGTGAAT......................................................................................................................................2311.001000000000000000000000000000000000000000000000000000100000000000
....................................................................................................................................................................................................................................................................................................................AAC-ACGCA-AC-----------------------GAAGAAGCA....................................1911.001000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................ATCGT---CGTCTTGAA-AAGGT.................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................ATGAAGCGCCAAAAATGATTGC....................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................AAC-ACGCA-AC-----------------------GAAGAAGCAATTGC...............................2411.001000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................GATTGCAA---TGTGTGAATCGT---C...............................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................GAATCGT---CGTCTTGAA-AAGGTTTTGTT...........................................................................................................2711.001000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................GATTTCAATATGAAGCGCC................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AGCAACTGCAAC-ACGCA-AC-----------------------.............................................1920.501001000000000000000000000000000000000000000000000000000000000000
droMoj3
TGTATTATTTATATA--------------T-------------------AT------AAATACATAT-GTG---------------------------TGT------------------------------------------ATCTATATATGTATTAATGGTGTCTCGCTTATTTATT--GTG-TACTTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAA---TGTGTGAATCGT---CGTCTTGAAAAAGGTTTTGTTTCCGTTGATTGAAATTAAAGCAACTG---------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................ATGAAGCGCCAAAAATGATTGC....................................................................................................................................................2211.001100000
....................................................................................................................................................................................................................TTCAATATGAAGCGCCAAAAATG.........................................................................................................................................................2311.001000001
.............................................................................................................................................................................................................................................TGCAA---TGTGTGAATCGT---CGTCTTGAA.......................................................................................................................2611.001000001
.................................................................................................................................................................................................................................GCCAAAAATGATTGCAA---TGTGT..........................................................................................................................................2211.001000001
droGri2
GTTTGTAC--------------------TT-------------------TGACATCAGATTTCATGTATTTCCATTTAATTTG-------------CAAGT---CG--------TCTGTTTTTTCTTTTCTGATATATGTTGTATATATATATGTAT-AATC-TCT------T-TTTCT---CTTGTCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAA---TGTGTGCATCGT---CGTCTTGAA-AAGGTTTTGTTTCCGTTGATTAAAATTAAAGCAACTGCAACACGCAA-CGC-------------------AACGAAGAAACA------------AT------------------T---SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................................................GCAACTGCAACACGCAA-C.....................................................................1811.00110
...............................................................................................................................................................................................................................................................................................................ACTGCAACACGCAA-CGC-------------------AACG............................................2111.00101
.........................................................................................................................................................................................................................................................................TGAA-AAGGTTTTGTTTCCGTTGATTA................................................................................................2611.00110
..........................................................................................................................................................................................................................................................................................................AAGCAACTGCAACACGCAA-CGC-------------------AAC.............................................2511.00110
....................................................................................................................................................................................................................................................................................................AAATTAAAGCAACTGCAACACGCA........................................................................2411.00110
.........................................................................................................................................................................................................................................................................................................AAAGCAACTGCAACACGCAA-CG....................................................................2211.00110
..................................................................................................................................................................................................................ATTTCAATATGAAGCGCCAAAA............................................................................................................................................................2211.00101
droAna3
ATTTTTTTTA-TGT--------------TA------CTCTTGGGCGA--GTACATCACATTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TT------------------------------------------------------TA-TGT------T-ATTGTT--GCTTTCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AACGTTTTCGTTCCATTGATTTA-ATTAGAGCCACTGAAAGCGGTTG-ACGAC-------------GAC-GACGA-------------------CGACG-------AC----GAC---SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................................................GCCACTGAAAGCGGTTG-ACGAC-------------....................................................2211.001000010
.................................................................................................................................................................................................................................GCCAAAAATGATTGCAG---CGTTTGC........................................................................................................................................2411.001000010
..................................................................................................................................................................................................................................................................................................TTA-ATTAGAGCCACTGAAAGC............................................................................2111.001010000
...............................................................................................................................................................................................................................................................................................GATTTA-ATTAGAGCCACTGAAAGC............................................................................2411.001010000
..............................................................................................................................................................................................................................................................................................................CACTGAAAGCGGTTG-ACGAC-------------....................................................2011.001010000
............................................................................................................................................................................................................................................................................................ATTGATTTA-ATTAGAGCCACTGA................................................................................2311.001000100
.....................................................................................................................................................................................................................................................................GTCTTGAA-AACGTTTTCGTTCCATT.....................................................................................................2511.001010000
........................................................................................................................................................................................................................................................TTGCATCGT---AGTCTTGAA-AAC...................................................................................................................2111.001010000
...............................................................................................................................................................................................................................................................................................GATTTA-ATTAGAGCCACTGAAA..............................................................................2211.001000010
....................................................................................................................................................................................................................................................................................................A-ATTAGAGCCACTGAAAGCGG..........................................................................2111.001000001
........................................................................................................................................................................................................................ATATGAAGCGCCAAAAATGATTGCAG---C..............................................................................................................................................2711.001000010
............................................................................................................................................................................................................................................................................................................GCCACTGAAAGCGGTTG-ACGAC-------------GAC-GA..............................................2711.001000010
..................................................................................................................................................................................................................................................................................................TTA-ATTAGAGCCACTGAAAGCGGTT........................................................................2511.001000010
........................................................................................................................................................................................................................................................................................................................GGTTG-ACGAC-------------GAC-GACGA-------------------CGA.....................2121.002010010
...................................................................................................................................................................................................GATT-------CTCGATTTCAATATGAAGCGCCAA..............................................................................................................................................................2811.001100000
......................................................................................................................................................................................................................................AAATGATTGCAG---CGTTTGCATC.....................................................................................................................................2211.001000010
......................................................................................................................................................................................................................CAATATGAAGCGCCAAAAATG.........................................................................................................................................................2111.001010000
...........................................................................................................................................................................................................................TGAAGCGCCAAAAATGATTGCAG---CGT............................................................................................................................................2611.001000010
........................................................................................................................................................................................................................................................................................................................GGTTG-ACGAC-------------GAC-GACGA-------------------CGAC....................2220.501010000
...........................................................................................................................................................................................................................................................................................................................TG-ACGAC-------------GAC-GACGA-------------------CGACG-------A...........2180.131010000
...............................................................................................................................................................................................................................................................................................................................CGAC-------------GAC-GACGA-------------------CGACG-------AC----......19200.051100000
droBip1
GGC------------------------------------------GA--CTACATCACATTTCATGTTTTTCCATTTAATTTAA------------TGTGT---TT------------------------------------------------------TG--GT------T-ATTGTT--GCTTTCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AACGTTTTTTT--CATTGATTTA-ATTAGAGCCACGGCAAGCG---------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TTTTTTTTTG-TGC--------------TCTC--------TTAACGA--CAACATCACATTTCATGT-TTTCCATTTAATTTA-------------TATGT---TT------------------------------------------------------CT-CGT------C-ATTGTT--GCTTTCATTGCAGGATT-------CTCGATGTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATAGTAT-AATCTTCAA-ACGGTTTTTTT--CATTGATTTA-A---------CTTAAAACGGTCG-ACCAGCCATCAGTAAGAG---CAGTGA----------------------------A--AG----GGC---SizeHit CountTotal NormTotal
No Reads
droFic1
TTTTTGT---------------------TT-------------------CTACATCACATTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TA------------------------------------------------------TG-TGT------T-TTTGTT--GTTTTCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACTGAAAGCGGTTG-GCCATCCAGAGAAGCGAG---CGACCA-------------------GG------------------G---SizeHit CountTotal NormTotal
No Reads
droEle1
TTTTGCTTTT-TGT--------------TT-------------------CTACATCGCATTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TA------------------------------------------------------TT-TGT------T-ATTGTT--GCTTTCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACTGAAAGCGGTTG-GCC-------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTTTTTTTTT-TC------------------------------------TTACATCGCATTTCATGT-TTTCCATTTAATTTA-------------TGTAT---TA------------------------------------------------------TG-TGT------T-ATTGTT--GCTTTCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACTGAAAGCGGTTG-GCCTGCCAAAAAAAAGAG---CAACCA-------------------GG------------------G---SizeHit CountTotal NormTotal
No Reads
droBia1
TGGGTTTTTT-TGT--------------TT-------------------CTACATCACATTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TA------------------------------------------------------TG-TGT------T-TTTGTT--GCTTTCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACCGAAAGCGGTTG-GCCAGCCAGAAAAACGAG---CA-------------------------------------------A---SizeHit CountTotal NormTotal
No Reads
droTak1
TTTCTTTTTT-TGT--------------TT-------------------CGACATCACATTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TATG----------------------------------------------------TG-TGT------T-TTTGTT--GCTTTCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACCGAAAGCGGTTG-GCCAGCCAGCAA-----------------------------------------------A----AAC---SizeHit CountTotal NormTotal
No Reads
droEug1
TTGTTTTT--ATATATATATATATATATTT-------------------CTACATCACATTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TA---------------------------------------------------------------------TTGTT--GGTTTCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACTGAAAGCGGTTG-GCCAGCCAA--------------------------------------GAAA-------AA----AAA---SizeHit CountTotal NormTotal
No Reads
dm3
TTTTCTT-CT-TGT--------------TTTTG---GT-----------CTACATCATGTTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TA------------------------------------------------------TG-TGT------T-CTTGTT--GCTTCCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACTGAAAGCGGTTG-GCCAGCCAGAA-----------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
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S2		SRR341116
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ML-DmD21		V022
ML-DmD32		V023
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1182-2H		V027
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CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
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CME-W1-Cl.8+		V034
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Ovary		V066
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S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
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Ovary		V0882
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fGS/OSS		V092
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S2-R+		V095
S2-R+		V096
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ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
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Head		V138
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Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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..TTCTT-CT-TGT--------------TTTTG---GT-----------CTAC...............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................GAAGCGCCAAAAATGATTGCAG---CG.............................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................AAGCGGTTG-GCCAGCCAGA............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................CACTGAAAGCGGTTG-GCCAGCCAGAA-----------------------------------------------------------2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TGAAAGCGGTTG-GCCAGCCA..............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AGAGCCACTGAAAGCGGT.........................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TGATTTA-ATTAGAGCCACTGA................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................GTTTGCATCGT---AGTCTTGAA-AAGGTT................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................ATCGT---AGTCTTGAA-AAGGTTTTTTT--CAT......................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................GCAG---CGTTTGCATCGT---AGTCTTGAA-AA....................................................................................................................2711.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................CGT---AGTCTTGAA-AAGGTTTTTTT--CA.......................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
................................................................................................................................................................................................................................................................................................ATTTA-ATTAGAGCCACTGAAAGCGG..........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.......................................................................................................................................................................................................................AATATGAAGCGCCAAAAATGA........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TGCAG---CGTTTGCATCGT---AGTCTTGAA-A.....................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GAGCCACTGAAAGCGGTTG-GCC...................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................CCAAAAATGATTGCAG---CGTTT..........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TTAGAGCCACTGAAAGCGGTTG-GCCA..................................................................2611.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TTGAA-AAGGTTTTTTT--CATT.....................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................ATTGATTTA-ATTAGAGCCACTG.................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TGAAAGCGGTTG-GCCAGC................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................ATGATTGCAG---CGTTTGCATCGT---AGTC............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................TTAGAGCCACTGAAAGCGGTTG-GCCAGC................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................AAAAATGATTGCAG---CGTTTGCAT......................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TCGT---AGTCTTGAA-AAGGTTTTTTT--CAT......................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................GCCAAAAATGATTGCAG---CG.............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................T-------CTCGATTTCAATATGAAGCGCC................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TTAGAGCCACTGAAAGCGGTTG-GCC...................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................TTTTTTT--CATTGATTTA-ATTAGAGCCAC...................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TTGCATCGT---AGTCTTGAA-AAGGTTT...............................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ATTAGAGCCACTGAAAGC............................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TAGAGCCACTGAAAGCGGTTG-GCCAGCCA..............................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AGAGCCACTGAAAGCGGTTG-GCCAGC................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TTGCATCGT---AGTCTTGAA-AAGG..................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................T--CATTGATTTA-ATTAGAGCCACT..................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TGCATCGT---AGTCTTGAA-AAGGTTTTT.............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TTTA-ATTAGAGCCACTGAAAG.............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.............................................................................................................................................................................................................................................................TCGT---AGTCTTGAA-AAGGTTTT..............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................CAG---CGTTTGCATCGT---AGTCTTGAA-AA....................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................ATTGCAG---CGTTTGCATCGT---AGT.............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................GATTTCAATATGAAGCGCC................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TTTA-ATTAGAGCCACTGAA...............................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................TTTGCATCGT---AGTCTTGAA-AAG...................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................ATGAAGCGCCAAAAATGATTGCAG---C..............................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GCGGTTG-GCCAGCCAGAA-----------------------------------------------------------1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................AAAAATGATTGCAG---CGTTTGCATCG....................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TTA-ATTAGAGCCACTGAAAGCGGTT........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................CAATATGAAGCGCCAAAAATGATTGC....................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................ATTTCAATATGAAGCGCCAAA.............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TGTGT---TA------------------------------------------------------TG-TGT------T-CTTGTT--GC............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TAGAGCCACTGAAAGCGGTTG-GCCAGC................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TTAGAGCCACTGAAAGCGGTT........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................GATTTCAATATGAAGCGCCAAAA............................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................ATGATTGCAG---CGTTTGC........................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TTTTG---GT-----------CTACATCATGTTTC.....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTCCCCCTCT-TGT--------------TTTTA---GT-----------CTACATCATGTTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TA------------------------------------------------------TG-TGT------T-CTTGTT--GCTTCCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACTGAAAGCGGTTG-GCCAGCCAGAA-----------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................TTTGCATCGT---AGTCTTGAA-AAGGTT................................................................................................................2513.00300000010000002000
...................................................................................................................................................................................................................................................................................................TA-ATTAGAGCCACTGAAAGCGGT.........................................................................2313.00300000010011000000
......................................................................................................................................................................................................................................................GTTTGCATCGT---AGTCTTGA........................................................................................................................1912.00202000000000000000
..............................................................................................................................................................................................................................................................CGT---AGTCTTGAA-AAGGTT................................................................................................................1812.00201000001000000000
.........................................................................................................................................................................................................................................................TGCATCGT---AGTCTTGAA-AAGGTTTTT.............................................................................................................2612.00200000000000002000
..............................................................................................................................................................................................................................................................................................................CACTGAAAGCGGTTG-GCCAGCC...............................................................2211.00100000000000100000
......................................................................................................................................................................................................................................................GTTTGCATCGT---AGTCTTGAA-A.....................................................................................................................2111.00101000000000000000
...................................................................................................................................................................................................................................................................................................TA-ATTAGAGCCACTGAAAGCGGTT........................................................................2411.00100000000001000000
................................................................................................................................................................................................................................CGCCAAAAATGATTGCAG---C..............................................................................................................................................1911.00100100000000000000
............................................................................................................................................................................................................................................TTGCAG---CGTTTGCATCGT---AGTCTTGA........................................................................................................................2611.00100100000000000000
..................................................................................................................................................................................................................................................................................................TTA-ATTAGAGCCACTGAAAGC............................................................................2111.00101000000000000000
.........................................................................................................................................................................................................................TATGAAGCGCCAAAAATG.........................................................................................................................................................1811.00100000000000100000
......................................................................................................................................................................................................................................................GTTTGCATCGT---AGTCTTGAA-AAGGG.................................................................................................................2511.00101000000000000000
...............................................................................................................................................................................................................................................................GT---AGTCTTGAA-AAGGTTTTTTT--CATT.....................................................................................................2611.00100000000001000000
.......................................................................................................................................................................................................................................................TTTGCATCGT---AGTCTTGA........................................................................................................................1811.00100100000000000000
.....................................................................................................................................................................................................................................................CGTTTGCATCGT---AGTCTTGA........................................................................................................................2011.00100100000000000000
.....................................................................................................................................................................................................................................................CGTTTGCATCGT---AGTCTTGAA-......................................................................................................................2111.00100100000000000000
..............................................................................................................................................................................................................................................GCAG---CGTTTGCATCGT---AGTCTTGAA-......................................................................................................................2511.00100100000000000000
......................................................................................................................................................................................................................................................GTTTGCATCGT---AGTCTTGAA-AAGGC.................................................................................................................2511.00101000000000000000
...................................................................................................................................................................................................................................................................................................TA-ATTAGAGCCACTGAAAGCGGTA........................................................................2411.00100000000000010000
............................................................................................................................................................................................................................................................................................ATTGATTTA-ATTAGAGCCACTGAAAGCGGT.........................................................................3011.00100000001000000000
.............................................................................................................................................................................................................................................................................................TTGATTTA-ATTAGAGCCACTGAAAGCGGT.........................................................................2911.00100000001000000000
.................................................................................................................................................................................................................................................................................................TTTA-ATTAGAGCCACTGAAAGCGGTT........................................................................2611.00100000000001000000
.......................................................................................................................................................................................................................................................TTTGCATCGT---AGTCTTGAA-AAGGTTT...............................................................................................................2611.00100000010000000000
droSec2
TTTTTTTTCT-TGT--------------TTTTG---GT-----------CTACATCATGTTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TA------------------------------------------------------TG-TGT------T-CTTGTT--GCTTCCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACTGAAAGCGGTTG-GCCAGCCAGAA-----------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................TGAAAGCGGTTG-GCCAGCC...............................................................1911.0010010
......................................................................................................................................................................................................................................................GTTTGCATCGT---AGTCTTGAA-AAGGT.................................................................................................................2511.0010010
........................................................................................................................................................................................................................................................................................................TAGAGCCACTGAAAGCGGTTG-GCC...................................................................2411.0010010
.............................................................................................................................................................................................................................................................................................TTGATTTA-ATTAGAGCCACT..................................................................................2011.0010010
................................................................................................................................................................................................................................................................................................................CTGAAAGCGGTTG-GCCAGCCAGA............................................................2311.0010010
........................................................................................................................................................................................................................................................TTGCATCGT---AGTCTTGAA-......................................................................................................................1811.0010010
...........................................................................................................................................................................................................................................................................................CATTGATTTA-ATTAGAGCCACTGAA...............................................................................2511.0010100
..................................................................................................................................................................................................................................................................................................................GAAAGCGGTTG-GCCAGCCA..............................................................1911.0010010
....................................................................................................................................................................................................................................................................................TTTTT--CATTGATTTA-ATTAGAGCC.....................................................................................2411.0010010
.....................................................................................................................................................................................................................................................CGTTTGCATCGT---AGTCTTGAA-AAGGT.................................................................................................................2611.0010010
....................................................................................................................................................................................................................................................................................................A-ATTAGAGCCACTGAAAGCGGTT........................................................................2311.0010100
.......................................................................................................................................................................................................................................................................................................TTAGAGCCACTGAAAGCGGTTG-GCCAGCCA..............................................................3011.0010100
....................................................................................................................................................................................................................................AAAAATGATTGCAG---CGTTTGCATC.....................................................................................................................................2411.0010100
.................................................................................................................................................................................................................................................................................................TTTA-ATTAGAGCCACTGAAAGCGGTT........................................................................2611.0010010
.........................................................................................................................................................................................................................................................TGCATCGT---AGTCTTGAA-AA....................................................................................................................1911.0010010
.....................................................................................................................................................................................................................................................CGTTTGCATCGT---AGTCTTGAA-A.....................................................................................................................2211.0010010
.....................................................................................................................................................................................................................................................................................................................AGCGGTTG-GCCAGCCAGA............................................................1811.0010010
................................................................................................................................................................................................................................................................................................ATTTA-ATTAGAGCCACTGAAAGCGGTT........................................................................2711.0010010
...............................................................................................................................................................................................................................................................................................................ACTGAAAGCGGTTG-GCCAGCC...............................................................2111.0010100
droYak3
TTTTTTTTTA-TGTA-------------TTTTA---GT-----------CTACATCATGTTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TA------------------------------------------------------TG-TGT------T-TTCGTT--GCTTCCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACTGAAAGCGGTTG-GCCAGCCAGAAAAACGAGGACCGACCA-------------------GG------------GAT-AAA---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................AAAGCGGTTG-GCCAGCCAGAAAAACG......................................................26117.0017000000000017
..............................................................................................................................................................................................................................................GCAG---CGTTTGCATCGT---AGTCTT..........................................................................................................................2212.00200100010000
............................................................................................................................................................................................................................................................ATCGT---AGTCTTGAA-AAGGT.................................................................................................................1912.00200000020000
.......................................................................................................................................................................................................................................AATGATTGCAG---CGTTTGCATC.....................................................................................................................................2112.00200010010000
......................................................................................................................................................................................................................................AAATGATTGCAG---CGTTTGC........................................................................................................................................1911.00100000010000
.................................................................................................................................................................................................................................................................................................TTTA-ATTAGAGCCACTGAAAGCGGTT........................................................................2611.00100000010000
..................................................................................................................................................................................................................................................................................................TTA-ATTAGAGCCACTGAAAGCGGTTG-GC....................................................................2811.00101000000000
...................................................................................................................................................................................................................................CAAAAATGATTGCAG---CGTTTGC........................................................................................................................................2211.00100000010000
........................................................................................................................................................................................................................ATATGAAGCGCCAAAAATGATTGCA...................................................................................................................................................2511.00100000010000
......................................................................................................................................................................................................................................................GTTTGCATCGT---AGTCTTGAA-AAGGT.................................................................................................................2511.00100000010000
..............................................................................................................................................................................................................CTCGATTTCAATATGAAGCGCC................................................................................................................................................................2211.00101000000000
.......................................................................................................................................................................................................................................AATGATTGCAG---CGTTTGCATCGT---AGTC............................................................................................................................2711.00100000010000
...............................................................................................................................................................................................................................................................................AGGTTTTTTT--CATTGATTTA-ATT...........................................................................................2311.00101000000000
...........................................................................................................................................................................................................................................................CATCGT---AGTCTTGAA-AAGGTT................................................................................................................2111.00101000000000
..........................................................................................................................................................................................................................................................................................................................................AACGAGGACCGACCA-------------------GG------------GAT-......2011.00101000000000
.................................................................................................................................................................................................................................GCCAAAAATGATTGCAG---CGT............................................................................................................................................2011.00100000010000
........................................................................................................................................................................................................................................ATGATTGCAG---CGTTTGCATCGT---AGTCTT..........................................................................................................................2811.00100000010000
..................................................................................................................................................................................................................................................................................................................GAAAGCGGTTG-GCCAGCCA..............................................................1911.00100000010000
................................................................................................................................................................................................................................................AG---CGTTTGCATCGT---AGTCTTGAA-......................................................................................................................2311.00110000000000
..............................................................................................................................................................................................................................................GCAG---CGTTTGCATCGT---AGTCTTGAA-A.....................................................................................................................2611.00100000010000
.......................................................................................................................................................................................................................................................................................................TTAGAGCCACTGAAAGCGGTT........................................................................2111.00100000010000
....................................................................................................................................................................................................................................................................................................................AAGCGGTTG-GCCAGCCAGA............................................................1911.00101000000000
.............................................................................................................................................................................................................................................................................................TTGATTTA-ATTAGAGCCACT..................................................................................2011.00100000010000
..................................................................................................................................................................................................................................................................................................TTA-ATTAGAGCCACTGAAAGC............................................................................2111.00100100000000
...................................................................................................................................................................................................................................................................................................TA-ATTAGAGCCACTGAAAGCG...........................................................................2111.00100000010000
...........................................................................................................................................................................................................................................................CATCGT---AGTCTTGAA-AAGGT.................................................................................................................2011.00100100000000
.................................................................................................................................................................................................................................................................................................................TGAAAGCGGTTG-GCCAGCCAGAAAAAC.......................................................2711.00101000000000
.........................................................................................................................................................................................................................................................................................................................................AAACGAGGACCGACCA-------------------GG------------..........1811.00101000000000
........................................................................................................................................................................................................................................................................................................................................AAAACGAGGACCGACCA-------------------GG------------..........1911.00101000000000
...........................................................................................................................................................................................................................................ATTGCAG---CGTTTGCATCGT---AGTCT...........................................................................................................................2411.00100000010000
droEre2
TTTTTTTTT-------------------TTTAA---GT-----------CTACATCATGTTTCATGT-TTTCCATTTAATTTA-------------TGTGT---TA------------------------------------------------------TG-TGT------T-TTTGTT--GCTTCCATTGCAGGATT-------CTCGATTTCAATATGAAGCGCCAAAAATGATTGCAG---CGTTTGCATCGT---AGTCTTGAA-AAGGTTTTTTT--CATTGATTTA-ATTAGAGCCACTGAAAGCGGTTG-GCCAGCCAGAAA-----------------------------------------------A----AAC---SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................GAAGCGCCAAAAATGATTGCAG---C..............................................................................................................................................2313.0031000110
....................................................................................................................................................................................................................................................................................................A-ATTAGAGCCACTGAAAGCGGTT........................................................................2312.0020000110
..............................................................................................................................................................................................................................................................................................................CACTGAAAGCGGTTG-GCCAGCCAGA............................................................2511.0010000010
......................................................................................................................................................................................................................................................GTTTGCATCGT---AGTCTTGAA-AAGGTT................................................................................................................2611.0010000100
.......................................................................................................................................................................................................................................AATGATTGCAG---CGTTTGCA.......................................................................................................................................1911.0010000010
.......................................................................................................................................................................................................................................AATGATTGCAG---CGTTTGCATC.....................................................................................................................................2111.0010100000
.................................................................................................................................................................................................................................................................................................................TGAAAGCGGTTG-GCCAGC................................................................1811.0011000000
.................................................................................................................................................................................................................................................................................................TTTA-ATTAGAGCCACTGAAAGC............................................................................2211.0010000100
..............................................................................................................................................................................................................................................GCAG---CGTTTGCATCGT---AGT.............................................................................................................................1911.0010001000
........................................................................................................................................................................................................................ATATGAAGCGCCAAAAATG.........................................................................................................................................................1911.0010000100
..........................................................................................................................................................................................................................ATGAAGCGCCAAAAATGATTGC....................................................................................................................................................2211.0010000100
...................................................................................................................................................................................................................................................................................................................AAAGCGGTTG-GCCAGCCAG.............................................................1911.0011000000
..........................................................................................................................................................................................................................ATGAAGCGCCAAAAATGATT......................................................................................................................................................2011.0010000010
........................................................................................................................................................................................................................ATATGAAGCGCCAAAAATGATTGCAG---C..............................................................................................................................................2711.0010100000
...........................................................................................................................................................................................................................................................................................CATTGATTTA-ATTAGAGC......................................................................................1811.0010000010
.......................................................................................................................................................................................................................................AATGATTGCAG---CGTTTGCATCGT---A...............................................................................................................................2411.0010001000
....................................................................................................................................................................................................................................................................................................................AAGCGGTTG-GCCAGCCAGA............................................................1911.0010000010
.................................................................................................................................................................................................................................................G---CGTTTGCATCGT---AGTCTTGAA-A.....................................................................................................................2311.0010000010
.....................................................................................................................................................................................................................................AAAATGATTGCAG---CGTTTGC........................................................................................................................................2011.0010000100
.................................................................................................................................................................................................................................................................................................................TGAAAGCGGTTG-GCCAGCCA..............................................................2011.0010000010
......................................................................................................................................................................................................................................AAATGATTGCAG---CGTTTGCATC.....................................................................................................................................2211.0010000100
..............................................................................................................................................................................................................................................GCAG---CGTTTGCATCGT---AGTCTTGAA-A.....................................................................................................................2611.0011000000
..........................................................................................................................................................................................................................................................GCATCGT---AGTCTTGAA-AAG...................................................................................................................1911.0011000000
.................................................................................................................................................................................................................GATTTCAATATGAAGCGCC................................................................................................................................................................1911.0010000100
...................................................................................................................................................................................................................................................................................................TA-ATTAGAGCCACTGAAAGCGGT.........................................................................2311.0011000000
......................................................................................................................................................................................................................................................GTTTGCATCGT---AGTCTTGAA-AAGGT.................................................................................................................2511.0010000100
......................................................................................................................................................................................................................................AAATGATTGCAG---CGTTTG.........................................................................................................................................1811.0010000010
........................................................................................................................................................................................................................ATATGAAGCGCCAAAAATGATTGCAG---...............................................................................................................................................2611.0011000000
.................................................................................................................................................................................................................................................................................................TTTA-ATTAGAGCCACTGAAAGCGGTT........................................................................2611.0010000100
................................................................................................................................................................................................................................................AG---CGTTTGCATCGT---AGTCTTG.........................................................................................................................2111.0010000010
......................................................................................................................................................................................................................................AAATGATTGCAG---CGTTTGC........................................................................................................................................1911.0011000000
..............................................................................................................................................................................................................................................GCAG---CGTTTGCATCGT---AGTCTT..........................................................................................................................2211.0011000000

Generated: 05/17/2015 at 10:29 PM