ID:

dps_461

 Coordinate:

2:10416558-10416708 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.3 -20.0 -19.9 -19.8

Flybase annnotation

exon [dpse_GLEANR_5363:20]; CDS [Dpse\GA18897-cds]; intron [Dpse\GA18897-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGACGCAGACCCCCTCCGAGGACAAGGATGAGGCGGAGCTGGTGCTACAGGTATGTACCCAAACGACGAGTGACTGCTTGCACGTCTTGTGTCTGTTGCCTTGGCTTTAATATCTGTATATGTATGTGTATGTGTCTGTCTGTGTACATCCCTCCTGATCGTATGTTTCTTGTTTCTGTTGTGCGTTTGTGTCTCTCCCTCTGCCTTTTTGATTTACTTTGCCCTTGTAACTTTCCTAACATGAACCGACA
**************************************************..............((.(((.(((.....(((((((.......((.(((...(((....((((..((((((....))))))))))..)))...)))))........))).....................))))......))).)))..))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902012
CNS imaginal disc
 V112
male body
....................GACAAGGATGAGGCGGAGCTGGTG............................................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0
.GACGCAGACCCCCTCCGAGGACAAGG................................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0
......AGACCCCCTCCGAGGACAAGGA............................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0
...........................ATGAGGCGGAGCTGGTGCTACAG......................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0
.................GAGGACAAGGATGAGGCGGAGCT................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0
....................GACAAGGATGAGGCGGAGCTGGTGCT............................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 1
................CGAGGACAAGGATGAGGCGGAGCT................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0
.........................................................................................................................GTATGTGTATGTGTCTGTCTGT............................................................................................................ 22 0 1 1.00 1 1 0 0
.........................GGATGAGGCGGAGCTGTTGCTA............................................................................................................................................................................................................ 22 1 1 1.00 1 1 0 0
.....................................................................................................................TTATGTATGTGTATGTGTCT.................................................................................................................. 20 1 3 0.33 1 0 0 1
............................TGAAGCGGAGCTGGT................................................................................................................................................................................................................ 15 1 14 0.14 2 0 2 0
.........................GGATGAGGCGGTGCGGGTG............................................................................................................................................................................................................... 19 2 8 0.13 1 1 0 0
.......................AAGGATGAGGGAGAGGTGGTG............................................................................................................................................................................................................... 21 3 16 0.06 1 1 0 0
.....................ACTGGGATGAGGCGGGGCTG.................................................................................................................................................................................................................. 20 3 18 0.06 1 1 0 0
.....................................................................................................................ATATGTATGTGTATGTGTT................................................................................................................... 19 1 20 0.05 1 1 0 0
..........................GATGAGGCGGACCGGATGC.............................................................................................................................................................................................................. 19 3 20 0.05 1 1 0 0
...........................ATGAAGCGGAGCTGGTC............................................................................................................................................................................................................... 17 2 20 0.05 1 0 1 0
................................................................................................................................................................................................................TTGATTAACTTTGCGCTTGC....................... 20 3 20 0.05 1 1 0 0

Anti-sense strand reads

TCTGCGTCTGGGGGAGGCTCCTGTTCCTACTCCGCCTCGACCACGATGTCCATACATGGGTTTGCTGCTCACTGACGAACGTGCAGAACACAGACAACGGAACCGAAATTATAGACATATACATACACATACACAGACAGACACATGTAGGGAGGACTAGCATACAAAGAACAAAGACAACACGCAAACACAGAGAGGGAGACGGAAAAACTAAATGAAACGGGAACATTGAAAGGATTGTACTTGGCTGT
**************************************************..............((.(((.(((.....(((((((.......((.(((...(((....((((..((((((....))))))))))..)))...)))))........))).....................))))......))).)))..))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V112
male body		 M062
head
 GSM444067
head
...............................................................................................................................................................................................AGAGAGGGAGACGGAAAAACTAAA.................................... 24 0 1 1.00 1 1 0 0
................................................................................................................................................ATGTTGGGAGTACTAGCATC....................................................................................... 20 3 3 0.33 1 0 1 0
......TTTGGGCGAGGCTCCTGT................................................................................................................................................................................................................................... 18 2 9 0.11 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:10416508-10416758 + dps_461 AGACGCAGAC------------CCCCTCCG---AGGACAA--GG---ATGAGGCGGA---GCTGGTGCTACAGGTATGTACCCAAACGACGAGTGAC--TGC---TTGCACGTCTTGTGT------------------CTGTTGCCTTGGCTTTAAT--AT----------------------------CTGTATA--TGTAT--------GT----GTATGTGTCTGTCTGTGTACA--TCCCTCCT-------------GAT-------------CGTATGTTTCTT-GTTTC--TGTT------------------------GTGCGTTT-------GTGTCTCTC------------CCTCTGCC-TTT--------------------------------T------TGATTT-ACTTTGCCCTTGTAACTTTCCTAACATGAACC-----------GACA
droPer2 scaffold_5876:323-585 - AGACGCAGAC------------CCCCTCCG---AGGACAA--GG---ATGAGGCGGA---GCTGGTGCTACAGGTATGTACCCAAACGACGAGTGAC--TGC---CTGCACGTCTTGTGT------------------CTGTTGCCTTGGCTTTAAT--AT----------------------------CTGTATG--TGTAT--------GT----GTCTGTGTATGTCTGTGTACA--TCCCTCCC-------------GAT-------------CGTATGTTTCTT-GTTTC--TGTT------------------------GTGCGTTT-------GTGTCTCTCCCTCTCCCTCTGCCTCTGCC-TTT--------------------------------T------TGATTT-ACTTTTCCCTTGTAACTTTCCTAACATGAACC-----------GACA
droWil2 scf2_1100000004943:6796073-6796319 - AAACTCAAACCCAA--------------------GAAGCA--AC---A----GAACAACAACAAGAACTGCAGGTATGTAC-----------TTCAACCTGG---ACGCACGTCT--TG-------------------------TGTTAACTTTTAT--ATCTTGTGTACGTCTCG----CT-CTG----TGTATGTGTGTGT--------------------------------GTC--TCTCTCAATCTCTCTAACACTGAT-------T----CTCTGTCC-TTTT-GTTTT--T-------------ATGCCAGTCTGTGTGTGTGTTT-------GT------------------GTGTCTGGT-TTT--------------------------------T------T-----GATTTTTGCCATGTAAC--TTTTAACATAAACC-----CAACCCGACA
droVir3 scaffold_12822:3537866-3538091 - dvi_2718 AGACACAGAC------------CAATTCCA---G-----------------TCAGCAGCAGCAACAACAACAGGTATGTATCCA-----------------G---ATGCACGTCTTTTGCTAA----------------------CTT-ACTTCAAC--AT----------------------------TTCTGTG--TCTCAATATTTTTATGTGTG----TGTACGT-GTAGTGTG--TGTTTGTG-------------TGCCTGTGTGTG--TGTGTGCGTGTTAC-CTTTG--TTTA-------A-CGT---C-TC-------------------------------------------GATGTC-CTT--------------------------------T------T------CATTTTTCTGTGCCGCACTCTTAACATACACGAGC--------GCAA
droMoj3 scaffold_6540:16841872-16842106 - AGACACAAAC------------AAATTCAA---GCCAGCA--GC---C------AAACCAGCAACAACAACAGGTATGTATTTA-----------------A---CTGCACGTCTTTCGCTAAC-----------------TTACTTTGACTTGTGT--GT----------------------------CTATCTAAATGTGT--------------G----TGTACTTTCTTATACG--TCCATATA-------------TACTTATGTGTGTGCGTGAGTGTGTTAC-AATTG--TTTA-------A-AAT---CTTTTCAACAT---------------------------------GCGTCTGTC-CTT--------------------------------T------T------GATTTAACTGTGCAAC--ACTTAACACACACC-----------AGCG
droGri2 scaffold_14906:1153278-1153534 - AGACGCAGACGCAGACACAAACCAATCCCA---GCCAGCA--ACCAACTCAACAGCAACAACAACAACAACAGGTATGTATT-----------------TGA---AAGCACGTCTTTGCCTAACTCTCCTGTAAATGTCTGT--------------------------GTGTCTCA----ATTTTGTGTGTGTGTG--TGTGT--------AT----GTA--------------------------TG-------------TGT------GAG--TGTGTGTACGTTACTGTTCC--TCTA-------A-----CCTCTTTAAGCGTGTGTC---------------------------------TGTCCTTT--------------------------------T------T------GATTTTACTGTGTTAC--ACTTAACATAAATCAGCGCAAAAGCGACT
droAna3 scaffold_13340:16935740-16935967 - AGACACAAACGCAAA------CGCACGAAA---CGGAGAA--GG---ACGAAGAGGA---GCACCAGCTACGGGTATGTAC-----------CTGACTTTGG---ATGCACGTCTCTTG-------------------------TCTTGGCATTAAT--GT----------------------------CTGTTTG--TGTGT--------------------------------ACA--TCTTTCGA-------------AAT------CTG--TGCGTGTACTTTTT-GTTTCTGTGTG-------T-AGTGCCTGCCTGTGAGAGTGAGA-------G--------------------------GG-TA-TCCA---------------------------AC------A----G-ACTATACCCATGTAAC--TGCTAACACGAACA-----------GACA
droBip1 scf7180000396424:449932-450164 - AGACACAAACGCAG------------GAAA---CGGAGAA--GG---ACGAGGAGGA---GCACCAGCTACGGGTACGTAC-----------CTGACTTTGG---ATGCACGTCTCTTG-------------------------TCTTGGCTTAAAT--GT----------------------------CTGTTTG--TGTGT--------------------------------ACA--TCCTTCGA-------------ACT------TTG--TGCGTGTACTT-TT-GTTTCTGTGTG-----TAGTAGTGCCTGCCTGTGCGAGTGAGACTCTGCTG--------------------------GG-TA-C----------------------ATCC---CAC------A----G-AGTATACCCATGTAAC--TGCTAACACGAACA-----------GACA
droKik1 scf7180000302253:297310-297520 - AGACGCAAAC------------GAAGG--A---GGGAGAAGACG---CCGAAGCCGAGGAGCAGGCCCCACAGGTATGTAG-CA-----C--CTGAC--TGG---ATGCACGTCTTCTGT------------------C--CTGTCATGGCTTTAAC--AT----------------------------CTCTCTGTGTGTGT--ATTT---------------------TGTATCCGTAACTTTCGA-------------TCT------------------CGCATTC-GTTTG--TG-------------------------TTCGTTCCC-------G--------------------------GG-TA-CT------------------------------C------------GGATACACCCATGTAAC--CGCTAACACGAACC-----------GACA
droFic1 scf7180000454055:2298103-2298337 + AGACGCAAA------------CGACCTCTGCCAAAAATAA--AG---ATGAAGAGGAGGAGTCGCAACTACAGGTATGTAGCGA-----C--CTGACTCTGA---ATGCACGTCTTCTG-------------------------TCTTGGCTTTAAT--GT----------------------------CTATATGTGTGTGT--------------GT--GTATGTGTGCGTGTACG--TCTTTCGA-------------TAT------CTG--TGCGTGTACTTTTC-GTTTG--TGTA-------A-AATGCCTGTCTGTGTGAGAA--------------------------------------------------------------------------AG------------AGATACACTCATGTAAC--AGCTAACACGACCC-----------GACA
droEle1 scf7180000491280:426259-426478 + AGACGCAAA------------CGACCTCGG---CGGAGAA--GG---ACGACGAGGAGCAGTCGCAACTACAGGTATGTACCCAA-CTAC--CTGACTGTGG---ATGCACGTCTCTTG-------------------------TCTTGGCTTTAAT--GT----------------------------CTGTGTG--TGTGT--------------------------------ACG--TCTTTCAA-------------TAT------CTG--TGCGTGTAATTTTC-GTTTG--TGTA-------T-ATCGCCCGTCTGTGTGCGAG------------------------------------------------------------------------ATAC------------ATATACACCCATGTAAC--AGCTAACACGAACA-----------GACA
droRho1 scf7180000778271:70028-70235 + AGACGCAAA------------CGACCTCTG---CGGAGAA--GG---ACGACGAGGAGCAGTCGCAACTACAGGTATGTAC-----------CTGACTGTGG---ATGCACGTCTCTTG-------------------------TCTTGGCTTTAAT--GT----------------------------CTGTG----TGTGT--------------------------------ACG--TCTTTCAA-------------TAT------ATG--TGCGTGTACTTTTC-GTTTG--TGTA----------ATGCCCGTCTGTGTGCGAG------------------------------------------------------------------------ATAC------------AAATACACCCATGTAAC--AGCTAACACAAACC-----------GACA
droBia1 scf7180000302113:2643579-2643848 + AGACGCAAA------------CGACCTCTG---AGGGCAA--AG---ATGCCGACGAGCAGTCGCAACTACAGGTATGTGCCCA-----C--CTCAGGTTGGGATATGCACGTCTCTTG-------------------------TCTTGGCTTTAATTCGT----------------------------CTGTCTG--TGTGT--------------------------------GCG--TCTTTCAA-------------TACTCGTACCTG--TGCGTGTACTTTTC-GTTTG--TTTAAAATGTAT-AATGCCTGTCTGTGTACGAGTTG-------G--------------------------GA-T--CCCAG------------ATCCAGCCCCGCATACAGAAACAGATACAGTTACACCCATGTAAC--AGCTAACACGAACA-----------GACA
droTak1 scf7180000415286:414080-414254 + AG-----------------------------------------------------------TCGCAACTACAGGTATGTGAGCA-----C--CTCAAGGTGG-ATATGCACGTCTCT----------------------------CTT-----------GT----------------------CTAT--CTGT--G--TGTGT--------------------------------ACG--TCTTTCAA-------------TAT------TTG--TGCGTGTACTTTTC-GTTTG--TGTA-------A-AAT----------------GTTA-------G-----------------------------GA-CTCAG------------ATCC----CCAA---C------AGATACAAATACACCCATGTAAC--AGCTAACACGAACC-----------GACA
droEug1 scf7180000409682:187585-187829 - AGACACAGACGCCAA------CGAGCTCTG---AGGAGAA--AG---ATGAAGAGGAGCAGTCGCAACTACAGGTATGTAGCCA-----C--CTGGCGGTGG---ATGCACGTCTCTTG-------------------------TCTTGGCTTTATT--GT----------------------------CTGTG----TGTGT--------------------------------ACG--TCTTTCAA-------------TAT------CTG--TGCGTGTACT-TTC-GTTTG--TGTA-------A-AATGCCCGACCGTGTGCGTGTTC-------G--------------------------GG-TA-CACAG-----------GATCCACATCCTAATAC------------AGATACACCCATGTAAC--AGCTAACACGAACC-----------GACA
dm3 chr3R:22406686-22406934 + AGACACAGACGCAAA------CGACCTCCA---CGGAGAA--GG---ATGAAGAGGAGGAGTCGCAACTACAGGTATGTACCCA-----C--CTGACCGTGG---ATGCACGTCTCTTG-------------------------TCTTGGCTTTAAT--AT----------------------------CTGTGTGTGTGTGT--------------------------------ACG--TCTTTCAA-------------TAT------TTG--TGCGTGTACCATTC-GTTTG--TGTA-------A-AATACCTGTCTGTGTGCGAGTTT-------G--------------------------GG-TA-CCCAG------------ATCCAGATCCAAATAC------------AGATACACCCATGTAAC--AGCTAACACGAACC-----------GACA
droSim2 3r:21866635-21866881 + dsi_2292 AGACACAGACGCAAA------CGACCTCCA---CGGAGAA--GG---ATGAAGAGGAGGAGTCGCAACTACAGGTATGTACATA-----C--CTGACCGTGG---ATGCACGTCTCTTG-------------------------TCTTGGCTTTAAT--GT----------------------------CTGTGTG--TGTGT--------------------------------ACG--TCTTTCAA-------------TAT------TTG--TGCGTGTACCATTC-GTTTG--TGTA-------A-AATACCTGTCTGTGTGCGAGTTT-------T--------------------------GG-TA-CCCAG------------ATCCAGATCCAAATAC------------AGATACACCCATGTAAC--AGCTAACACGAACC-----------GACA
droSec2 scaffold_13:1181816-1182062 + AGACACAGACGCAAA------GGACCTCTA---CGGAGAA--GG---ATGAAGAGGAGGAGTCGCAACTACAGGTATGTACCCA-----C--CTGACCGTGG---ATGCACGTCTCTTG-------------------------TCTTGGCTTTAAT--GT----------------------------CTGTGTG--TATGT--------------------------------ACG--TCTTTCAA-------------TAT------TTG--TGCGTGTGCCATTC-GTTTG--TGTA-------A-AATACCTGTCTGTGTGCGAGTTT-------G--------------------------GG-TA-CTCAG------------ATCCAGATCCAAATAC------------AGATACACCCATGTAAC--AGCTAACACGAACC-----------GACA
droYak3 3R:24093726-24093996 - AGACACAAACGCAAACGCAAACGACCTCCA---CGGAGAA--GG---ATGAAGAGGAGCAGTCGCAACTACAGGTATGTACCCA-----C--CTGACCGTGG---ATGCACGTCTCTTG-------------------------TCTTGGCTTTAAT--GT----------------------------CTGTGTGTGTGTGT--------------GTAC--------------ACG--TCTTTCAA-------------TAT------TTG--TGTGTGTACTTTTT-GTTTG--AGTA-------A-AATACCTGTCTGTGTGCGAGTTT-------G--------------------------GG-TA-CCAAGACCCAGACCCAGATCCAGATCCAAGTAC------------AGATACACCCATGTAAC--AGCTAACACGAACC-----------GACA
droEre2 scaffold_4820:5648965-5649225 - AGACACAGACGCAAA------CGACCTCCG---CGGAGCA--GG---ATGAAGAGGAGCAGTCGCAACTACAGGTATGTACCCA-----C--CTGACCGTGG---ATGCACGTCTCTTG-------------------------TCTTGGCTTTAAT--GTCTC-----------TCTGTAT-GTA----TGTGTGTGTGTGT--------------------------------ACG--TCTTTCAA-------------TAT------TTG--T--GTGTATTTTTT-GTTCG--AGTA-------A-AACACCTGTCTGTGTGCGAGTTT-------T--------------------------GG-TA-CCCAG------------ATCCAGATCCAAGTAC------A----GAGAAACACCCATGTAAC--AGCTAACACGAGCC-----------GACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
AGACGCAGAC------------CCCCTCCG---AGGACAA--GG---ATGAGGCGGA---GCTGGTGCTACAGGTATGTACCCAAACGACGAGTGAC--TGC---TTGCACGTCTTGTGT------------------CTGTTGCCTTGGCTTTAAT--AT----------------------------CTGTATA--TGTAT--------GT----GTATGTGTCTGTCTGTGTACA--TCCCTCCT-------------GAT-------------CGTATGTTTCTT-GTTTC--TGTT------------------------GTGCGTTT-------GTGTCTCTC------------CCTCTGCC-TTT--------------------------------T------TGATTT-ACTTTGCCCTTGTAACTTTCCTAACATGAACC-----------GACASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................GACAA--GG---ATGAGGCGGA---GCTGGTG...............................................................................................................................................................................................................................................................................................................................................................................................................2412.0020200000000
.GACGCAGAC------------CCCCTCCG---AGGACAA--GG---...................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
......AGAC------------CCCCTCCG---AGGACAA--GG---A..................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...............................................ATGAGGCGGA---GCTGGTGCTACAG.........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.............................G---AGGACAA--GG---ATGAGGCGGA---GCT...................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000001
...................................GACAA--GG---ATGAGGCGGA---GCTGGTGCT.............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000001000
............................CG---AGGACAA--GG---ATGAGGCGGA---GCT...................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000001
.......................................................................................................................................................................................................GTAT--------GT----GTATGTGTCTGTCTGT.........................................................................................................................................................................................................................................2211.0010100000000
.................................................................................................................................................................................................ATA--TGTAT--------GT----GTATGTGTT................................................................................................................................................................................................................................................19200.0510100000000
droPer2
AGACGCAGAC------------CCCCTCCG---AGGACAA--GG---ATGAGGCGGA---GCTGGTGCTACAGGTATGTACCCAAACGACGAGTGAC--TGC---CTGCACGTCTTGTGT------------------CTGTTGCCTTGGCTTTAAT--AT----------------------------CTGTATG--TGTAT--------GT----GTCTGTGTATGTCTGTGTACA--TCCCTCCC-------------GAT-------------CGTATGTTTCTT-GTTTC--TGTT------------------------GTGCGTTT-------GTGTCTCTCCCTCTCCCTCTGCCTCTGCC-TTT--------------------------------T------TGATTT-ACTTTTCCCTTGTAACTTTCCTAACATGAACC-----------GACASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................CGTATGTTTCTT-GTTTC--TGT......................................................................................................................................................................2011.001001000
...........................CCG---AGGACAA--GG---ATGAGGC............................................................................................................................................................................................................................................................................................................................................................................................................................1920.501001000
....................................................................................................................................................................................................................T----GTCTGTGTATGTCTGTGTACA--TCC...............................................................................................................................................................................................................................2520.501010000
....................................................GCGGA---GCTGGTGCTACAG.........................................................................................................................................................................................................................................................................................................................................................................................................1820.501010000
............................CG---AGGACAA--GG---ATGAGGCGGA---GCT...................................................................................................................................................................................................................................................................................................................................................................................................................2420.501100000
droWil2
AAACTCAAACCCAA--------------------GAAGCA--AC---A----GAACAACAACAAGAACTGCAGGTATGTAC-----------TTCAACCTGG---ACGCACGTCT--TG-------------------------TGTTAACTTTTAT--ATCTTGTGTACGTCTCG----CT-CTG----TGTATGTGTGTGT--------------------------------GTC--TCTCTCAATCTCTCTAACACTGAT-------T----CTCTGTCC-TTTT-GTTTT--T-------------ATGCCAGTCTGTGTGTGTGTTT-------GT------------------GTGTCTGGT-TTT--------------------------------T------T-----GATTTTTGCCATGTAAC--TTTTAACATAAACC-----CAACCCGACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....CAAACCCAA--------------------GAAGCA--AC---A----G.............................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
..................................................................................................................................................................................................................................................................................................GTTTT--T-------------ATGCCAGTCTGTGTGTGT.........................................................................................................................................2411.00100100
............AA--------------------GAAGCA--AC---A----GAACAACAACA...................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
....................................................GAACAACAACAAGAACTGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................2220.50101000
...................................AAGCA--AC---A----GAACAACAAC....................................................................................................................................................................................................................................................................................................................................................................................................................1830.33110000
......................................................ACAACAACAAGAACTGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
droVir3
AGACACAGAC------------CAATTCCA---G-----------------TCAGCAGCAGCAACAACAACAGGTATGTATCCA-----------------G---ATGCACGTCTTTTGCTAA----------------------CTT-ACTTCAAC--AT----------------------------TTCTGTG--TCTCAATATTTTTATGTGTG----TGTACGT-GTAGTGTG--TGTTTGTG-------------TGCCTGTGTGTG--TGTGTGCGTGTTAC-CTTTG--TTTA-------A-CGT---C-TC-------------------------------------------GATGTC-CTT--------------------------------T------T------CATTTTTCTGTGCCGCACTCTTAACATACACGAGC--------GCAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................TTCCA---G-----------------TCAGCAGCAGCAACAACAAC...........................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000010000000000000000000000000
...CACAGAC------------CAATTCCA---G-----------------TCAGCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
...CACAGAC------------CAATTCCA---G-----------------TCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
.......................AATTCCA---G-----------------TCAGCAGCAGCAACAACA.............................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
AGACACAAAC------------AAATTCAA---GCCAGCA--GC---C------AAACCAGCAACAACAACAGGTATGTATTTA-----------------A---CTGCACGTCTTTCGCTAAC-----------------TTACTTTGACTTGTGT--GT----------------------------CTATCTAAATGTGT--------------G----TGTACTTTCTTATACG--TCCATATA-------------TACTTATGTGTGTGCGTGAGTGTGTTAC-AATTG--TTTA-------A-AAT---CTTTTCAACAT---------------------------------GCGTCTGTC-CTT--------------------------------T------T------GATTTAACTGTGCAAC--ACTTAACACACACC-----------AGCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AGACGCAGACGCAGACACAAACCAATCCCA---GCCAGCA--ACCAACTCAACAGCAACAACAACAACAACAGGTATGTATT-----------------TGA---AAGCACGTCTTTGCCTAACTCTCCTGTAAATGTCTGT--------------------------GTGTCTCA----ATTTTGTGTGTGTGTG--TGTGT--------AT----GTA--------------------------TG-------------TGT------GAG--TGTGTGTACGTTACTGTTCC--TCTA-------A-----CCTCTTTAAGCGTGTGTC---------------------------------TGTCCTTT--------------------------------T------T------GATTTTACTGTGTTAC--ACTTAACATAAATCAGCGCAAAAGCGACTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........ACGCAGACACAAACCAATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
................................................TCAACAGCAACAACAACAACA.............................................................................................................................................................................................................................................................................................................................................................................................................21200.05110
droAna3
AGACACAAACGCAAA------CGCACGAAA---CGGAGAA--GG---ACGAAGAGGA---GCACCAGCTACGGGTATGTAC-----------CTGACTTTGG---ATGCACGTCTCTTG-------------------------TCTTGGCATTAAT--GT----------------------------CTGTTTG--TGTGT--------------------------------ACA--TCTTTCGA-------------AAT------CTG--TGCGTGTACTTTTT-GTTTCTGTGTG-------T-AGTGCCTGCCTGTGAGAGTGAGA-------G--------------------------GG-TA-TCCA---------------------------AC------A----G-ACTATACCCATGTAAC--TGCTAACACGAACA-----------GACASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TATACCCATGTAAC--TGCTAACACGAAC................2711.001010000
...........CAAA------CGCACGAAA---CGGAGAA--GG---...................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
....................................AGAA--GG---ACGAAGAGGA---GC....................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000010
.....................................GAA--GG---ACGAAGAGGA---GCACC.................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.............AA------CGCACGAAA---CGGAGAA--GG---...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
...................................................................................................................................................................................................................................................................................................................................................................................A-TCCA---------------------------AC------A----G-ACTATACCCATGTAAC--.............................2511.001010000
..........................................GG---ACGAAGAGGA---GCACCAGCTACGGT........................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
.......................CACGAAA---CGGAGAA--GG---ACGAAGAGGA---G.....................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
..........................GAAA---CGGAGAA--GG---ACGAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................2020.501000010
droBip1
AGACACAAACGCAG------------GAAA---CGGAGAA--GG---ACGAGGAGGA---GCACCAGCTACGGGTACGTAC-----------CTGACTTTGG---ATGCACGTCTCTTG-------------------------TCTTGGCTTAAAT--GT----------------------------CTGTTTG--TGTGT--------------------------------ACA--TCCTTCGA-------------ACT------TTG--TGCGTGTACTT-TT-GTTTCTGTGTG-----TAGTAGTGCCTGCCTGTGCGAGTGAGACTCTGCTG--------------------------GG-TA-C----------------------ATCC---CAC------A----G-AGTATACCCATGTAAC--TGCTAACACGAACA-----------GACASizeHit CountTotal NormTotal
No Reads
droKik1
AGACGCAAAC------------GAAGG--A---GGGAGAAGACG---CCGAAGCCGAGGAGCAGGCCCCACAGGTATGTAG-CA-----C--CTGAC--TGG---ATGCACGTCTTCTGT------------------C--CTGTCATGGCTTTAAC--AT----------------------------CTCTCTGTGTGTGT--ATTT---------------------TGTATCCGTAACTTTCGA-------------TCT------------------CGCATTC-GTTTG--TG-------------------------TTCGTTCCC-------G--------------------------GG-TA-CT------------------------------C------------GGATACACCCATGTAAC--CGCTAACACGAACC-----------GACASizeHit CountTotal NormTotal
No Reads
droFic1
AGACGCAAA------------CGACCTCTGCCAAAAATAA--AG---ATGAAGAGGAGGAGTCGCAACTACAGGTATGTAGCGA-----C--CTGACTCTGA---ATGCACGTCTTCTG-------------------------TCTTGGCTTTAAT--GT----------------------------CTATATGTGTGTGT--------------GT--GTATGTGTGCGTGTACG--TCTTTCGA-------------TAT------CTG--TGCGTGTACTTTTC-GTTTG--TGTA-------A-AATGCCTGTCTGTGTGAGAA--------------------------------------------------------------------------AG------------AGATACACTCATGTAAC--AGCTAACACGACCC-----------GACASizeHit CountTotal NormTotal
No Reads
droEle1
AGACGCAAA------------CGACCTCGG---CGGAGAA--GG---ACGACGAGGAGCAGTCGCAACTACAGGTATGTACCCAA-CTAC--CTGACTGTGG---ATGCACGTCTCTTG-------------------------TCTTGGCTTTAAT--GT----------------------------CTGTGTG--TGTGT--------------------------------ACG--TCTTTCAA-------------TAT------CTG--TGCGTGTAATTTTC-GTTTG--TGTA-------T-ATCGCCCGTCTGTGTGCGAG------------------------------------------------------------------------ATAC------------ATATACACCCATGTAAC--AGCTAACACGAACA-----------GACASizeHit CountTotal NormTotal
No Reads
droRho1
AGACGCAAA------------CGACCTCTG---CGGAGAA--GG---ACGACGAGGAGCAGTCGCAACTACAGGTATGTAC-----------CTGACTGTGG---ATGCACGTCTCTTG-------------------------TCTTGGCTTTAAT--GT----------------------------CTGTG----TGTGT--------------------------------ACG--TCTTTCAA-------------TAT------ATG--TGCGTGTACTTTTC-GTTTG--TGTA----------ATGCCCGTCTGTGTGCGAG------------------------------------------------------------------------ATAC------------AAATACACCCATGTAAC--AGCTAACACAAACC-----------GACASizeHit CountTotal NormTotal
No Reads
droBia1
AGACGCAAA------------CGACCTCTG---AGGGCAA--AG---ATGCCGACGAGCAGTCGCAACTACAGGTATGTGCCCA-----C--CTCAGGTTGGGATATGCACGTCTCTTG-------------------------TCTTGGCTTTAATTCGT----------------------------CTGTCTG--TGTGT--------------------------------GCG--TCTTTCAA-------------TACTCGTACCTG--TGCGTGTACTTTTC-GTTTG--TTTAAAATGTAT-AATGCCTGTCTGTGTACGAGTTG-------G--------------------------GA-T--CCCAG------------ATCCAGCCCCGCATACAGAAACAGATACAGTTACACCCATGTAAC--AGCTAACACGAACA-----------GACASizeHit CountTotal NormTotal
No Reads
droTak1
AG-----------------------------------------------------------TCGCAACTACAGGTATGTGAGCA-----C--CTCAAGGTGG-ATATGCACGTCTCT----------------------------CTT-----------GT----------------------CTAT--CTGT--G--TGTGT--------------------------------ACG--TCTTTCAA-------------TAT------TTG--TGCGTGTACTTTTC-GTTTG--TGTA-------A-AAT----------------GTTA-------G-----------------------------GA-CTCAG------------ATCC----CCAA---C------AGATACAAATACACCCATGTAAC--AGCTAACACGAACC-----------GACASizeHit CountTotal NormTotal
No Reads
droEug1
AGACACAGACGCCAA------CGAGCTCTG---AGGAGAA--AG---ATGAAGAGGAGCAGTCGCAACTACAGGTATGTAGCCA-----C--CTGGCGGTGG---ATGCACGTCTCTTG-------------------------TCTTGGCTTTATT--GT----------------------------CTGTG----TGTGT--------------------------------ACG--TCTTTCAA-------------TAT------CTG--TGCGTGTACT-TTC-GTTTG--TGTA-------A-AATGCCCGACCGTGTGCGTGTTC-------G--------------------------GG-TA-CACAG-----------GATCCACATCCTAATAC------------AGATACACCCATGTAAC--AGCTAACACGAACC-----------GACASizeHit CountTotal NormTotal
No Reads
dm3
AGACACAGACGCAAA------CGACCTCCA---CGGAGAA--GG---ATGAAGAGGAGGAGTCGCAACTACAGGTATGTACCCA-----C--CTGACCGTGG---ATGCACGTCTCTTG-------------------------TCTTGGCTTTAAT--AT----------------------------CTGTGTGTGTGTGT--------------------------------ACG--TCTTTCAA-------------TAT------TTG--TGCGTGTACCATTC-GTTTG--TGTA-------A-AATACCTGTCTGTGTGCGAGTTT-------G--------------------------GG-TA-CCCAG------------ATCCAGATCCAAATAC------------AGATACACCCATGTAAC--AGCTAACACGAACC-----------GACASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................A--GG---ATGAAGAGGAGGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001010000000000
...........................CCA---CGGAGAA--GG---ATGAAGAGGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CCA---CGGAGAA--GG---ATGAAGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................AA--GG---ATGAAGAGGAGGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100010000000
...................................GAGAA--GG---ATGAAGAGGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000
............................CA---CGGAGAA--GG---ATGAAGAGGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GAAGAGGAGGAGTCGCAACTA............................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GGAGAA--GG---ATGAAGAGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000
..........................................................GAGTCGCAACTACAGGTATGT...................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GAA--GG---ATGAAGAGGAGGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........................CCA---CGGAGAA--GG---ATGAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000
.GACACAGACGCAAA------CGACCTCCA---.................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CCA---CGGAGAA--GG---ATGAAGAGGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GGAGGAGTCGCAACTACAG.........................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................G---ATGAAGAGGAGGAGTCGC.................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
..........................TCCA---CGGAGAA--GG---ATGAAGAGGAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TGAAGAGGAGGAGTCGCAACTAC...........................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CCA---CGGAGAA--GG---ATGAAGAGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CCA---CGGAGAA--GG---ATGAAGAGGAGGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TCCA---CGGAGAA--GG---ATGAAGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CA---CGGAGAA--GG---ATGAAGAGGAGGATC....................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................AAGAGGAGGAGTCGCAACTACA..........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.....................CGACCTCCA---CGGAGAA--GG---ATG................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CAAA------CGACCTCCA---CGGAGAA--GG---AT.................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CGAGTTT-------G--------------------------GG-TA-CCCAG------------ATCCA.......................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TCCA---CGGAGAA--GG---ATGAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.....................................GAA--GG---ATGAAGAGGAGGAGTCGCA................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ACCTCCA---CGGAGAA--GG---ATGAAGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............AAA------CGACCTCCA---CGGAGAA--GG---ATGA...............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................ATACCTGTCTGTGTGCGA.........................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CGGAGAA--GG---ATGAAGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................GGAGAA--GG---ATGAAGAGGAGGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................................................T--AT----------------------------CTGTGTGTGTGTGT--------------------------------A......................................................................................................................................................................................................................................1821.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
.......................................A--GG---ATGAAGAGGAGGAGTCGCA................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
........................................................................................................................................................................................................................................................................................................................TACCTGTCTGTGTGCGAGTTT-------G--------------------------GG-................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.............................A---CGGAGAA--GG---ATGAAGAGGAGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GAA--GG---ATGAAGAGGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............AA------CGACCTCCA---CGGAGAA--GG---ATGAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................ATGAAGAGGAGGAGTCGCAACTACAGC........................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................GG---ATGAAGAGGAGGAGTC...................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TTG--TGCGTGTACCATTC-GTTTG--T........................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................GGAGGAGTCGCAACTACA..........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AA------CGACCTCCA---CGGAGAA--GG---ATG................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ACCTCCA---CGGAGAA--GG---ATGAAGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GGAGAA--GG---ATGAAGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GAAGAGGAGGAGTCGCAACT.............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
...........CAAA------CGACCTCCA---CGGAGAA--GG---ATGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GAAGAGGAGGAGTCGCAA...............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
..........................TCCA---CGGAGAA--GG---ATGAAGAGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......................................................................................................................................................................................................................................................................AT------TTG--TGCGTGTACCATTC-GT..............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GAGAA--GG---ATGAAGAGGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GTCTGTGTGCGAGTTT-------G--------------------------GG-................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................A---CGGAGAA--GG---ATGAAGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................CGACCTCCA---CGGAGAA--GG---ATGAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................................ATGAAGAGGAGGAGTCGC.................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................CCA---CGGAGAA--GG---ATGAAGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............AA------CGACCTCCA---CGGAGAA--GG---ATGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GAA--GG---ATGAAGAGGAGGAGTCGC.................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................GGAGAA--GG---ATGAAGAGGAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................ATGAAGAGGAGGAGTCGCA................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CGGAGAA--GG---ATGAAGAGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................CCCA-----C--CTGACCGTGG---ATGCACGTC................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TTAAT--AT----------------------------CTGTGTGTGTGTA........................................................................................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
droSim2
AGACACAGACGCAAA------CGACCTCCA---CGGAGAA--GG---ATGAAGAGGAGGAGTCGCAACTACAGGTATGTACATA-----C--CTGACCGTGG---ATGCACGTCTCTTG-------------------------TCTTGGCTTTAAT--GT----------------------------CTGTGTG--TGTGT--------------------------------ACG--TCTTTCAA-------------TAT------TTG--TGCGTGTACCATTC-GTTTG--TGTA-------A-AATACCTGTCTGTGTGCGAGTTT-------T--------------------------GG-TA-CCCAG------------ATCCAGATCCAAATAC------------AGATACACCCATGTAAC--AGCTAACACGAACC-----------GACASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................GTA-------A-AATACCTGTCTGTGT.............................................................................................................................................1911.00100010000000000000
..................................GGAGAA--GG---ATGAAGAGGAGGAGTC...................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
.................................CGGAGAA--GG---ATGAAGAGGAGGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000001000
............AAA------CGACCTCCA---CGGAGAA--GG---...................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
AGACACAGACGCAAA------CGACCTCCA---.................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000001000
droSec2
AGACACAGACGCAAA------GGACCTCTA---CGGAGAA--GG---ATGAAGAGGAGGAGTCGCAACTACAGGTATGTACCCA-----C--CTGACCGTGG---ATGCACGTCTCTTG-------------------------TCTTGGCTTTAAT--GT----------------------------CTGTGTG--TATGT--------------------------------ACG--TCTTTCAA-------------TAT------TTG--TGCGTGTGCCATTC-GTTTG--TGTA-------A-AATACCTGTCTGTGTGCGAGTTT-------G--------------------------GG-TA-CTCAG------------ATCCAGATCCAAATAC------------AGATACACCCATGTAAC--AGCTAACACGAACC-----------GACASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................ATACCTGTCTGTGTGCGA.........................................................................................................................................1811.0010010
............................................................................................................................................................T--GT----------------------------CTGTGTG--TATGT--------------------------------ACG--TCT...............................................................................................................................................................................................................................2111.0010010
...........................................G---ATGAAGAGGAGGAGTCGCA................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
............................................................................................................................................................................................................................................................................................................A-------A-AATACCTGTCTGTGTG............................................................................................................................................1811.0010010
.........CGCAAA------GGACCTCTA---CGGAGAA--GG---...................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
.........................CTCTA---CGGAGAA--GG---ATGAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..........................................GG---ATGAAGAGGAGGAGTC...................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..................................GGAGAA--GG---ATGAAGAGGAGGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
..........................................................................................................................................................................................................................................................................................................GTA-------A-AATACCTGTCTGTGTGCGA.........................................................................................................................................2311.0010010
...CACAGACGCAAA------GGACCTCTA---CG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
..........GCAAA------GGACCTCTA---CGGAGAA--G.......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
droYak3
AGACACAAACGCAAACGCAAACGACCTCCA---CGGAGAA--GG---ATGAAGAGGAGCAGTCGCAACTACAGGTATGTACCCA-----C--CTGACCGTGG---ATGCACGTCTCTTG-------------------------TCTTGGCTTTAAT--GT----------------------------CTGTGTGTGTGTGT--------------GTAC--------------ACG--TCTTTCAA-------------TAT------TTG--TGTGTGTACTTTTT-GTTTG--AGTA-------A-AATACCTGTCTGTGTGCGAGTTT-------G--------------------------GG-TA-CCAAGACCCAGACCCAGATCCAGATCCAAGTAC------------AGATACACCCATGTAAC--AGCTAACACGAACC-----------GACASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................GACCTCCA---CGGAGAA--GG---ATGAAGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
............AAACGCAAACGACCTCCA---CGGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
............................CA---CGGAGAA--GG---ATGAAGAGGAGCAGT....................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
AGACACAAACGCAAACGCAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
......................GACCTCCA---CGGAGAA--GG---ATGAAGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
droEre2
AGACACAGACGCAAA------CGACCTCCG---CGGAGCA--GG---ATGAAGAGGAGCAGTCGCAACTACAGGTATGTACCCA-----C--CTGACCGTGG---ATGCACGTCTCTTG-------------------------TCTTGGCTTTAAT--GTCTC-----------TCTGTAT-GTA----TGTGTGTGTGTGT--------------------------------ACG--TCTTTCAA-------------TAT------TTG--T--GTGTATTTTTT-GTTCG--AGTA-------A-AACACCTGTCTGTGTGCGAGTTT-------T--------------------------GG-TA-CCCAG------------ATCCAGATCCAAGTAC------A----GAGAAACACCCATGTAAC--AGCTAACACGAGCC-----------GACASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........ACGCAAA------CGACCTCCG---CGGAGCA--........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.........................CTCCG---CGGAGCA--GG---ATGAAGAGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
...........................................G---ATGAAGAGGAGCAGTCT..................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGTAAC--AGCTAACACGAGC................2211.0011000000
........................................................AGCAGTCGCAACTACAGC........................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
.........CGCAAA------CGACCTCCG---CGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
....................................AGCA--GG---ATGAAGAGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000010
..................................................................................................................................................................................GTAT-GTA----TGTGTGTGTGTGT--------------------------------A......................................................................................................................................................................................................................................2140.2510000100
..................................................................................................................................................................................GTAT-GTA----TGTGTGTGTGTGT--------------------------------.......................................................................................................................................................................................................................................20200.0510000100

Generated: 05/17/2015 at 10:27 PM