ID:

dps_451

 Coordinate:

2:10032438-10032654 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [Dpse\GA10739:12]; five_prime_UTR [Dpse\GA10739-u5]; five_prime_UTR [Dpse\GA10739-u5]; exon [Dpse\GA10739:11]; intron [Dpse\GA10739-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

--------------####################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGTTGGAAGATCGCGCTCAGTTGGTTTGGACGTATCCGCGGAGGTTAGCGGTATTCTATATAAGTGATTTTTTTCTTGTTAAAAATATATATATATATTATGATATAAAATCAAAGAATATTAATATAATAATTAATAGGTTGTTAAATTTGTATTAATAATGTTTGTTCCAAGTGGTTTTTTTATGAAAGTGATTTCAGAATACTTATGGTAGCTTCCGCTCTCTGCCTCTATCTCTCTCTCTCTTTCCCTGTTAGTTCCAGTGAGAGCACAGCCAACTACCACTTTTGGAACATTTGTTTTTGAGCCGCTCTTGA
**************************************************((((((((((((.(((((((((........)))))).))).))))))..............((((...(((((((((((...((((((...))))))..)))))))))))...))))..((....))........(((((....)))))))))))...(((......)))(((.(((...(((.....................)))...))).)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM343916
embryo
 M040
female body
 V112
male body		 SRR902011
testis
..............GCTCAGTTGGTTTGGACGTATCCGC...................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
..............GCTCAGTTGGTTTGGACG............................................................................................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0
.....................TGGTTTGGACGTATCCGCGGA................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
...........................GGACGTATCCGCGGAGGTTAGCGGTA........................................................................................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 1 0
.......................................................................................................................................................................TTCCAAGTGATTTTTTTATTA................................................................................................................................. 21 2 3 0.67 2 0 2 0 0
....................................................................................................................................................................TTCTTCAAAGTGGTTTTTTT..................................................................................................................................... 20 2 5 0.20 1 0 1 0 0
..............................................................................................................TCAAAAAATAATAATATAATAAT........................................................................................................................................................................................ 23 2 7 0.14 1 0 1 0 0
....................................................................................................................................................................TTCTTCAAAGTGGTTTTTT...................................................................................................................................... 19 2 14 0.07 1 0 1 0 0
........................................................TATATACGTGATATTTTTGTT................................................................................................................................................................................................................................................ 21 3 20 0.05 1 0 0 0 1

Anti-sense strand reads

TCAACCTTCTAGCGCGAGTCAACCAAACCTGCATAGGCGCCTCCAATCGCCATAAGATATATTCACTAAAAAAAGAACAATTTTTATATATATATATAATACTATATTTTAGTTTCTTATAATTATATTATTAATTATCCAACAATTTAAACATAATTATTACAAACAAGGTTCACCAAAAAAATACTTTCACTAAAGTCTTATGAATACCATCGAAGGCGAGAGACGGAGATAGAGAGAGAGAGAAAGGGACAATCAAGGTCACTCTCGTGTCGGTTGATGGTGAAAACCTTGTAAACAAAAACTCGGCGAGAACT
**************************************************((((((((((((.(((((((((........)))))).))).))))))..............((((...(((((((((((...((((((...))))))..)))))))))))...))))..((....))........(((((....)))))))))))...(((......)))(((.(((...(((.....................)))...))).)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
 V112
male body
..........................................................................................................................................................................................................................................................................................GTGGAAACCTTGGAAACAAGA.............. 21 3 4 0.25 1 1 0 0
.............................................................................................................................................................................................................................................ATAGAGAGAAAGGTACCATCA........................................................... 21 3 5 0.20 1 1 0 0
................................................................................................GAATACTATCTTTTGGTTTCT........................................................................................................................................................................................................ 21 3 11 0.09 1 0 1 0
.....................................................................................................................................................................................................................................AGATAGAGAGAGAGAGAAA..................................................................... 19 0 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:10032388-10032704 - dps_451 AG-----TTGGAAGATCGCGCTCAGTTGGTTTGGACGTATCCGCGGAGGTT-AGCGG--TATTCTAT-----ATAAGTGATTTT-TTTCT---------------TGTTAAA-----------------------------------------------------------------------------------------------AA-TA--------------------------TAT-------ATATATATTATGATATAAAATCAAAGAAT------------A---------------------------TTAATATAATA-ATTAAT------------------------------------------------------------------AGGTTGTTAAATTTGT----------------------------------------------------------------------------------------------------ATTAA-TAAT----------------GT-----------------TTGTTCCAAGTGGTTTTT-TTA-------------------TGAAAGTGATTTCAG------------------AATAC-------------TTATGGTAGCTTC-CGC----TCTCTGCCT---------------------------------------CT------A--TCTCTC---------------------------------------------TCTCTCTTTCC----------------------CTG--TT---------------------------AGTTCCAGTGA----GAGCACAGCCAAC--TACCACTTTTGGAACA---TTTGTTTTTGAGCCGCTCT-TGA
droPer2 scaffold_0:10449609-10449913 + AG-----TTGGAAGATCGCGCTCAGTTGGTTTGGACGTATCCGCGGAGGTT-AGCGG--TATTCTAT-----ACAAGTGATTTTTTTTCT---------------TGTTAAA-----------------------------------------------------------------------------------------------AA-TA--------------------------TAT-------ATATATAT---------ATATCAAAGAAT------------A---------------------------TTAATATAATA-ATTAAT------------------------------------------------------------------ATGTTGTTAAATTTGT----------------------------------------------------------------------------------------------------ACTGT-TCAT----------------GT-----------------GTGTTCCAAGTGGTTTTT-TTA-------------------TGAAAGTGATTTCGG------------------AATAC-------------TTATGGTAGCTTC-CGC----TCTCCGCCT---------------------------------------------------CTCTC---------------------------------------------TCTCTCTTTCC----------------------TTG--TT---------------------------AGTTCCAGTGA----GAGCACAGCCAAC--TACCACTTTTGGAACA---TTTGTTTTTGAGCCGCTCT-TGA
droWil2 scf2_1100000004943:12702619-12702920 - AG-----TTGGAATAAGCCACTCAGTTGGATTGGACGTGTTCACGGAAGAT-CAAAG--TTAT------------------TTA-CTTTT------GGTTAGT-----AA--A--------------GTTTTT-T-AAAA-------------------------------------------------------------------AA-------------------------AATGCAA-------ATATATAT-----------AATTAAAAATCTCTAAAATAGTT--A------------------AATACT------T--------------------------------------------------------------------------------------------------------------------------------------------------------------TAAC-ATAATTATCA-------------------TTCTTTTATAAA----TTACTG-TAATATTAAAGAACTAAATCTATTTT-------AGTTT--GCC--A--GAATAATGA-T-----------------------------------T------TAT--------------------------------TCTCTG--------------------------------------------------CTCTCTCT----------------CTCTCT----TCTT----CTCTATCAGTATTTGGTC------------------ACTTGGCTCTCT--CT------CG-----------------------------------------------------------ACAGCTCTTGCTCTCTGTGAGCCACTCT-TTA
droVir3 scaffold_12855:2455085-2455422 + AG-----TTGGAATTGTGCGCTCAATTGGTTTAGACGTGTGCACGGTTATT-ATTAT--ATTT-------------------TT-TTTTT----GGTGT--G-----TTGC----------------ATTTTT---TAAAAACATGACATTAC-------------------------------------------T--------------------------------------------------------------------------------------AATATAATAA------------------A----------ATAA-------ATAT------------------------TAAT---------TTAAAAT-------GCAT---------------------------T---------------------TT-------GATAAGTGCA--------------------------------------------------TAGTTTT--------------------------GA-----------------ATATTCGAATAAATCTAT-T--C--GAATAT---------ATGAATTATATTTAAA------------------GATTC-------------TTAT-ACAG--------------------------------------------------------------------CTCGCTCTCTCCCAATCTGTCAATCTTC-------CTC----TCTTCCTTGCTTTCTCTC------------------TCTTGGCTCACA-ACTCAACACT--------------------CATGCCAGTGT---TGTGCACTGTTTAC--TTCCAGCC--ACTGCG---A-GTTCTTTGAGCCGCTCT-TCA
droMoj3 scaffold_6540:11666136-11666447 + AG-----TTGGAATTCTGCGCTCGCTTGGACTAGACGTGTTTGCGGCTGATTCGCAC--CTAAAAAT-AAAT---------AAA-TATTTGCTTGGTGCATTT-----AA--A--------------TTTTAG----------------------------------------TAAG-----------------------------AAG-------------------------TGTGCAAATAATAGTAGAATTAATAAATAAATAATGTA---------------------------------A--------------------TA--------------------------------------------TTATAAAAT-------A-------TATTTAAGAA-------------------------------------------------GTGC----------------------------------------------------AATTGC-----------T--G--TT-------GA-----------------AAATTCCAAATA--------------A--------------------------------------------------AA-------------TTAAAACAGCTAA-CGCGTTATCTCTGTAT-----------------G----------------------------TTT--CTCCC---------------------------------------------TCTCACAGCTC----------------------CTA--TC------T--------------------CATTCCAGTGCTCTTGTGCACTGTTTAC--TTCCAGCC--AGTGT--TTG-GTTCTTTGAGCCGCTCT-TGA
droGri2 scaffold_14624:2485494-2485812 - AG-----TTGGAATTGTGCGCTCAATTGGTTAAGACGTGTCGACGGATAATTAACGG--CTGTTGAG-TTGT---------ATT-TTTTTTGTTGGTGT--G-----TTAAA----------------GATATGC-AAAATAATAAAC------------------------------------------------------------------------ACTA----------------------------------------------------------TTATAATTTAA------------------ATTAGT------TTATCA----ATAT------------------------AATT-------------------------------------------TAAATATGTATT---------------------TC-----------------------------------------------------------------------------AA-TAAT----------------AT-----------------TAATTCCAAGTGCACTT-----------------------AAAAATTAAAT----------------------------------------------------------------------------------------GTGAAATGTTCTTCAGAAACTTTTTTCTCTCT--CTCT----------------CTCTCTCTGTCTCT----CTCTATTTGTG-ACTCTC------------------TCTTTGCTCACA-ACTCAACTCA-----------------------------------------------CCTTTCCAGTC--GCAGCA---A-GTTCTTTGAGCCGCTCTTTGA
droAna3 scaffold_13340:18929142-18929441 - AG-----TTGGAAGACTGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTA-AGAAG--TGTTACCAAGAA-----------CC-CTTATTGT----------------A---TAATTCTGCCAAACTTACT--T-TAAAAACATGCGATTAC-------------------------------------------TAAGCCTTCA-ATAT-TTATT--------------------------------------------------------------------TAATTTTAGTAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATAATCAAGTTAA----TTAATGTTTAGAAAGATATTACCT---------------C-ATAAGTTTG--TTT---------------------------A-------AGCCATCTA---T--AAATACC----------------------------------------------------------------------------------------------------------------------------------------------CCT----------------CTTTCT----TCTT----TTTTTTTTGCCCTCTCTCT-------------------------------C--------TATTTTAGACTCTCCTCTCTGCTACCTGTTG----GAA-------------------G--TCAGC--------------AACCACTCTTTGA
droBip1 scf7180000395652:247770-248057 + AG-----TTGGAAGACTGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTA-AGAAG--TTTTAAAA-AAAT---------ATT-CTTT--------------------A----GATTCTATTAAGCTATCT--TTTTAAATCAAATTAATAA-------------------------------------------TAAATCTAAAAAGAG-GTATT--------------------------------------------------------------------ACATTTTATTACCTTTAAAAAAAAAG-----A------ATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------GAATATAAAGATATTACCT---------------T-AAAAGT-TG--TTT---------------------------A-------AGCCATCTA---C--GAATAAC----------------------------------------------------------------------------------------------------------------------------------------TCT--CATT----------------CTTCTT----TTGG----CCC------------------------------------------TCT--CT------CTATTTTAGCCTCTCCTCTCTGCTACCTGTTG----GAA-------------------G--TCAGC--------------AACCACTCT-TGA
droKik1 scf7180000302461:2279839-2280133 - AG-----TTGGAACGGCGCGCTCAGTTGGTGTAGACGTGTTCGCGGAGGTT-GGTTT--GGACATCA-CAAA---------ATT---CTTGT--------------------------------------------------------------TTAATTAAAAAAAATAGC-TAACAGAAATTAGAATTAACTTTTAAACCTATAAAGTG-----------------------------------------------------------------------------------------------------------------TG--T----ATTTTATTTAAAGATGAAATATATAAAATAT------------------------GTGT-------------------------------------------------------------------------------------------------------------TTCCTTGCAAAA-------------T----GT-AATTCTGCTTT----------------------------------CCT--T--TAATATTA------------------------------------------------AATTTAGGTTTT-T---------TT---------------T-----------------G----------------------------TTT--TTCT----------------CTCTCTATACCATT----CTCTTTT--------CGTTTCCC---------------------------CT------GT---------------------TCT----CC----AAC-------------------C--ACAGCTCTT-----CCTAAAACCACTCT-TGA
droFic1 scf7180000454055:617478-617785 + AG-----TTGGAACAGCGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTT-AGCAG--TGTTACAA-TAATTTTATTAATTTT----TT----TATGT--G-----TAAAA-----------------------------------------------------------------------------------------------------------------------------------AATAGTTG------------------------------------------------------------------------------------------------------------------------------AAGTGCTGAAC--------------AGAT-------------------------------------------------AAACAAAAATTATAGTGGCTGTT----TAAA-ATAAATATTAC------------------TACTATTAAAAG----TTTTTC-TGATTTTCA-----TAAATATGTTTT-------AGTTTTTT-CTAACAAAGTTTTAA------------------------------------------TTC-------------T--GGTTAGT-TT-TTC----TCTCTA--C-----------------ACAAACCA--------------------------CTCT----------------CTAAAT----TATT----CTCTCTTTGTATTTTCTCT-------------------------------C-------------------------------------TA----TAA-------------------A--CCAGCTCTT-----ATCCAAGCCTCTCT-TTA
droEle1 scf7180000491212:14628-14887 + AG-----TTGGAACAGTGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTT-AGAAA--GAAT------------------ATA-----------------------TTT-------------------------------------------AA---------------------------------------------------------AAATTTAAGATCTTTTAATATAAA------------------------------------------------------------------------------------------------------------------------------------------------TGCAGTAT--------------AAAC-------------CAATAGTTTAAAAAACTAGTT-TC-------TATAACTAGA--------------------------------AAATT------------------CTAAATACAAAAGT--G--TTTGTATCTTT----------------------------------AA---AAGAAATACATT-T-----------------------------------T------C-------------------------------------TTGCTGTTGGTATTTCTATCTACGTGAAAGACACTCCATACTTTTCA----------------------------------------------------------------ATATCTC----------------------TCT--CT------GG-----------------------------------AA-------------------T--GAAACTCTT------------TCTCTCT----
droRho1 scf7180000779488:65865-66083 - AG-----TTGGAACAGCGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTT-AGAAA--AAAG-------------------TT-CTTT-----------------------------------------------AAATTATCTTACAT------------------------------------------------------------------------TA----------------------------------------------------------AAATATATAAA------------------A----------ATAA-------CATA------------------------TCAT---------TTAAAATGCTTTAA--------------ATAT-------------------------------------------------TAGCAGTTTTTTGGGCAAAGCGT----TAAA-ACTTAAAATGC------------------GAATTACAAAAGT--G--TTTTCAGCTTT----------------------------------TA---A--AAATACCGT-T-----------------------------------G------T-------------------------------------TTGGTTTT---------------G-----------------------------------------------------------------------------TCATTTTCTCTCT------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302402:4511936-4512251 + AG-----TTGGAACAGCGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTT-AGCAG--TGTTC-------------------A-TTTGT------CGCTGATCATATCA-------------------------------------------AGAA--------------------A---------------------------------AGATCTAAAGTTCTTACAAACAGTA----------------------------------------------------------------------CA-AA-----------ATAAAA-GTTGAAAT------------------------TTAT--TACAATT-------ACTT-----------------------------------------------TAAAGC-TTTAG------------------------------------AG-----------------------------------------------------------------------------------TTACAATCTTCTT------T----GTCTTACATCTTT----------------TATGATGTCAATATTGTGAATAC-------------T--TGGTATCTACACAC----TCTCTGCCA-------------------------------------ATCT------C--TCTCTC---------------------------------------------TCTCTCTTCCTCTGATAAGTTTCCTTTTTAATGAAATATCCAATTTA-----------------------------------------------ATCTCTGGCTT-ACAAAAA---TATATTTTTAAGCC---------
droTak1 scf7180000415310:398735-398993 - AG-----TTGGAACAGCGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTT-AGAAG--TGTGC-------------------A-TATAT------CGCTTAG--------------------------------------------------------------AAAGATC-TGAAA---------------------------------AATATTAAAGTTCTTTAAAAAAATA----------------------------------------------------------------------TAGAA-----A------A-------------------------------------T--------------------------GTAT---------------------------CTTAAGTTTTATCAAATAATT-TCTGGCCCATAAAATTACA--------------------------------AAAAT------------------TTAATTA-AAAAGT--G--TCTTAAATTTT----------------------------------T--------------------------------------CATCGAGTTACAATTG----------------TATCT-T---------TA---------------T-----------------ATCAAACCTTCTCCTCGCTCTTCT------C--TCTCCC---------------------------------------------TCTCTC----------------------------------------------------------------------------------------------------------------------------TCTCT-CTG
droEug1 scf7180000409881:453918-454107 + AGTTCAGTTGGAACAGCGCGCTCAGTTGGTTTAGACGTGTTCACGGAGGTT-AGTGG--TGTTAAAT-AAAT--------------TTTTGGTGATCGCTTAA------------------------------------------------------------GAAGTTACC-TATGA---------------------------------AATATTAAAGTTGTAG---------------------ACAAATATTCTGAAAATTACTGCA---------------------------------A--------------------AA--------------------------------------------AT--------------GTATCTTATTGTAAAGTTTTTAAATT----------------------------------------------------------------------------------------------------TTTATTTT-AAAAGT---------------------------------TTCTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3R:20720466-20720757 + AG-----TTGGAACAGAGCGCTCAGTTGGTGAGGACGTGTTCGCGGAGGTA-AGTGA--CTACCGAA-GAAT---------ATT-----------------------TTA-------------------------------------------ATAAAGCATCTAAAATATCATATA-----------------------------AAATATGTATTAAAGTTTTTTGAAAA-------------------------------------------------------------------------------------------------------AA------------------------TATGTGTTGGATT--------------T---------------------------------------TTCCTAATTGTT-T------------------------------------ATTG------------------------TGTAAAATTTT-----------A--G--TTTTCAGTTTT----------------------------------AGC--C--AAATACCAA-T-----------------------------------T------TATAATCAAGTATCT-C---------TA---------------C-----------------A----------------------------TCT--CAAT----------------CTCACT----TTTA----CACTCTTGATATTCTCTCTTCCC----------------------TCC--CT------GG---------------------AAC----TG----AAA-------------------A--TCAGCTCCT-----AAC-AAACCACTCT-TGA
droSim2 3r:20236612-20236909 + dsi_11765 AG-----TTGGAACAGAGCGCTCAGTTGGTGAGGACGTGTTCGCGGTCTAC-AGAAC------------AAT---------ATA-----------------------TTA-------------------------------------------ATAAAGTATCTAAAATATC-TAGAA---------------------------------TGTATTAAAGTTTTTTGAAATCGTA----------------------------------------------------------------------TACAA-----A------TTAAATGC--ACAA------------------------TATTTTTAGGATT--------------T---------------------------------------TTTCTAATCGTT-T------------------------------------ATTG------------------------CGTAAAATTTT-----------A--G--TATTCAGTTTT----------------------------------AAT--G--AAATACCAA-T-----------------------------------T------TATAACCAAGTGTCT-A---------TA---------------T-----------------A----------------------------TCC--CAAT----------------CTCACC----TATA----CACTCTTGATATTCTCTCTTCCC----------------------TCC--CT------GG---------------------AAC----TG----GAA-------------------A--TCAGCTCCT-----AAC-AAATCACTCT-TGA
droSec2 scaffold_0:21068336-21068633 + AG-----TTGGAACAGAGCGCTCAGTTGGTGAGGACGTGTTCGCGGTCTCC-AGAAG--AA----------T---------ATA-----------------------TTA-------------------------------------------ATAAAGTATCTAAAATATC-TAGAA---------------------------------TGTATTAAAGTTTTTTGAATTCGTA----------------------------------------------------------------------TACAA-----A------TAAAATGC--ACAA------------------------TATTTGTAGGATT--------------T---------------------------------------TTTCTAATCGTT-T------------------------------------ATCG------------------------CGTAAAATTTT-----------A--G--TTTCCGGTTTT----------------------------------AAC--A--AAATACCAA-T-----------------------------------T------TATAACCAAGAATCT-A---------TA---------------T-----------------A----------------------------TCC--CCAT----------------CTCACT----TGTA----CACTCTTGATATTCTCTCTTCCC----------------------TCC--CT------GG---------------------AAC----TG----GAA-------------------A--TCAGCTCCT-----AAC-AAATCACTCT-TGA
droYak3 3R:25775012-25775317 - AG-----TTGGAAACGCGCGCTCAGTTGGTGAGGACGTGTTCGCGGAGGTA-AGTCAGTCTGCAGAA-AAAT---------ATT-----------------------TTA-------------------------------------------GCCAAGTAACCAAAATATC-TATAA---------------------------------TGTATTAAAGTTCTTTAAAAACGTA----------------------------------------------------------------------TAAAG-----A------ATGTATGA--ATAA------------------------TAATTATAGAAT---------------T---------------------------------------TTTCTAATTTGA-A------------------------------------AAGG------------------------CGTACAGTCCT-----------A--G--TATTCAGTTTC----------------------------------TAC--C--AAATATGAA-T-----------------------------------G------TATAACCAAGTCTCT-A---------TA---------------C-----------------A----------------------------TCT--C-AT----------------CTCTCT----TATATTCATATTCTTCATATTCTCTCTTTCT----------------------TCC--CT------G-----------------------------------GAA-------------------G--TCAGCTCCT-----AACTAAGCCACTCT-TGA
droEre2 scaffold_4820:7333042-7333342 - AG-----TTGGAACAGCGCGCTCAGTTGGTGAGGACGTGTTCGCGGAGGTA-AGTAT--CTACAGAA-GAAT---------ATT-TTTTT-------------------A-------------------------------------------GTTAGGTAGCCAAAATATC-TATAA---------------------------------TGTATTAAAGTTCTTTTAGAGCGTA----------------------------------------------------------------------TC-AA-----A------TTATAT----ATAC------------------------TATTTATAGGATT--------------T----------------------------------------TTTTAACAT-TTACG------------------------------------GG------------------------CGCACAATTTT-----------T--G--TTTTCAGTTTT----------------------------------TAC--C--AAATATCAA-T-----------------------------------G------TACAACCAAGCCTCT-A---------TA---------------T-----------------A----------------------------TCT--CTAT----------------CTCTCT----TATC----CCCTCTTTATATTCTCTCTTCCC----------------------TCC--CT------G-----------------------------------GAA-------------------A--ACAGCTCCT-----AACTAAACCACTCT-TCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
AG-----TTGGAAGATCGCGCTCAGTTGGTTTGGACGTATCCGCGGAGGTT-AGCGG--TATTCTAT-----ATAAGTGATTTT-TTTCT---------------TGTTAAA-----------------------------------------------------------------------------------------------AA-TA--------------------------TAT-------ATATATATTATGATATAAAATCAAAGAAT------------A---------------------------TTAATATAATA-ATTAAT------------------------------------------------------------------AGGTTGTTAAATTTGT----------------------------------------------------------------------------------------------------ATTAA-TAAT----------------GT-----------------TTGTTCCAAGTGGTTTTT-TTA-------------------TGAAAGTGATTTCAG------------------AATAC-------------TTATGGTAGCTTC-CGC----TCTCTGCCT---------------------------------------CT------A--TCTCTC---------------------------------------------TCTCTCTTTCC----------------------CTG--TT---------------------------AGTTCCAGTGA----GAGCACAGCCAAC--TACCACTTTTGGAACA---TTTGTTTTTGAGCCGCTCT-TGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................GCTCAGTTGGTTTGGACGTATCCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100000
...................GCTCAGTTGGTTTGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100000
..........................TGGTTTGGACGTATCCGCGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
................................GGACGTATCCGCGGAGGTT-AGCGG--TA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000001000
droPer2
AG-----TTGGAAGATCGCGCTCAGTTGGTTTGGACGTATCCGCGGAGGTT-AGCGG--TATTCTAT-----ACAAGTGATTTTTTTTCT---------------TGTTAAA-----------------------------------------------------------------------------------------------AA-TA--------------------------TAT-------ATATATAT---------ATATCAAAGAAT------------A---------------------------TTAATATAATA-ATTAAT------------------------------------------------------------------ATGTTGTTAAATTTGT----------------------------------------------------------------------------------------------------ACTGT-TCAT----------------GT-----------------GTGTTCCAAGTGGTTTTT-TTA-------------------TGAAAGTGATTTCGG------------------AATAC-------------TTATGGTAGCTTC-CGC----TCTCCGCCT---------------------------------------------------CTCTC---------------------------------------------TCTCTCTTTCC----------------------TTG--TT---------------------------AGTTCCAGTGA----GAGCACAGCCAAC--TACCACTTTTGGAACA---TTTGTTTTTGAGCCGCTCT-TGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................CTCAGTTGGTTTGGACGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
...............TCGCGCTCAGTTGGTTTGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
droWil2
AG-----TTGGAATAAGCCACTCAGTTGGATTGGACGTGTTCACGGAAGAT-CAAAG--TTAT------------------TTA-CTTTT------GGTTAGT-----AA--A--------------GTTTTT-T-AAAA-------------------------------------------------------------------AA-------------------------AATGCAA-------ATATATAT-----------AATTAAAAATCTCTAAAATAGTT--A------------------AATACT------T--------------------------------------------------------------------------------------------------------------------------------------------------------------TAAC-ATAATTATCA-------------------TTCTTTTATAAA----TTACTG-TAATATTAAAGAACTAAATCTATTTT-------AGTTT--GCC--A--GAATAATGA-T-----------------------------------T------TAT--------------------------------TCTCTG--------------------------------------------------CTCTCTCT----------------CTCTCT----TCTT----CTCTATCAGTATTTGGTC------------------ACTTGGCTCTCT--CT------CG-----------------------------------------------------------ACAGCTCTTGCTCTCTGTGAGCCACTCT-TTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--CT------CG-----------------------------------------------------------ACAGCTCTTGCTCTCTGTGAGC..........2711.00101000
....................................GTGTTCACGGAAGAT-CAAAG--TTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT--CT------CG-----------------------------------------------------------ACAGCTCTTGCTCTCTGTG.............2611.00101000
.......................................TTCACGGAAGAT-CAAAG--TT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
......................................GTTCACGGAAGAT-CAAAG--TTAT------------------T..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001
droVir3
AG-----TTGGAATTGTGCGCTCAATTGGTTTAGACGTGTGCACGGTTATT-ATTAT--ATTT-------------------TT-TTTTT----GGTGT--G-----TTGC----------------ATTTTT---TAAAAACATGACATTAC-------------------------------------------T--------------------------------------------------------------------------------------AATATAATAA------------------A----------ATAA-------ATAT------------------------TAAT---------TTAAAAT-------GCAT---------------------------T---------------------TT-------GATAAGTGCA--------------------------------------------------TAGTTTT--------------------------GA-----------------ATATTCGAATAAATCTAT-T--C--GAATAT---------ATGAATTATATTTAAA------------------GATTC-------------TTAT-ACAG--------------------------------------------------------------------CTCGCTCTCTCCCAATCTGTCAATCTTC-------CTC----TCTTCCTTGCTTTCTCTC------------------TCTTGGCTCACA-ACTCAACACT--------------------CATGCCAGTGT---TGTGCACTGTTTAC--TTCCAGCC--ACTGCG---A-GTTCTTTGAGCCGCTCT-TCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................CTCAATTGGTTTAGACGTGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000001000000000000000000000000000000000000000000000000000000100
................................AGACGTGTGCACGGTTAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000000000000000000000000000000000000000000000000000000000200
...................GCTCAATTGGTTTAGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000100000000000000000000000000000000
AG-----TTGGAATTGTGCGCTCAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000100000000000000000000000000000000000000000000000000000000
....................CTCAATTGGTTTAGACGTGTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000100000000000000000000000000000000000000000000000000000000
AG-----TTGGAATTGTGCGCTCAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
..................CGCTCAATTGGTTTAGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000001000000000000000000000000
......................CAATTGGTTTAGACGTGTGCACGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000001
...............GTGCGCTCAATTGGTTTAGACGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
.....................TCAATTGGTTTAGACGTGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000100
..................CGCTCAATTGGTTTAGACGTGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
....................CTCAATTGGTTTAGACGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000001000000000000000000000000
....................CTCAATTGGTTTAGACGTGTGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000100000000000000000000000000000000000000000000000000000000
...........................GGTTTAGACGTGTGCACGGTTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000010000000000000000000000000000000000000
............................GTTTAGACGTGTGCACGGTTATT-AT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
.....................TCAATTGGTTTAGACGTGTGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
droMoj3
AG-----TTGGAATTCTGCGCTCGCTTGGACTAGACGTGTTTGCGGCTGATTCGCAC--CTAAAAAT-AAAT---------AAA-TATTTGCTTGGTGCATTT-----AA--A--------------TTTTAG----------------------------------------TAAG-----------------------------AAG-------------------------TGTGCAAATAATAGTAGAATTAATAAATAAATAATGTA---------------------------------A--------------------TA--------------------------------------------TTATAAAAT-------A-------TATTTAAGAA-------------------------------------------------GTGC----------------------------------------------------AATTGC-----------T--G--TT-------GA-----------------AAATTCCAAATA--------------A--------------------------------------------------AA-------------TTAAAACAGCTAA-CGCGTTATCTCTGTAT-----------------G----------------------------TTT--CTCCC---------------------------------------------TCTCACAGCTC----------------------CTA--TC------T--------------------CATTCCAGTGCTCTTGTGCACTGTTTAC--TTCCAGCC--AGTGT--TTG-GTTCTTTGAGCCGCTCT-TGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................CTTGGACTAGACGTGTTTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002020000
......................CGCTTGGACTAGACGTGTTTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
...................GCTCGCTTGGACTAGACGTGTTTGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
................TGCGCTCGCTTGGACTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
....................................GTGTTTGCGGCTGATTCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...........................GGACTAGACGTGTTTGCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
...................GCTCGCTTGGACTAGACGTGTTTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100
.......................GCTTGGACTAGACGTGTTTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
...................GCTCGCTTGGACTAGACGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...........AATTCTGCGCTCGCTTGGACTAGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.......................GCTTGGACTAGACGTGTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTTGTGCACTGTTTAC--TTC.......................................2211.001000010
droGri2
AG-----TTGGAATTGTGCGCTCAATTGGTTAAGACGTGTCGACGGATAATTAACGG--CTGTTGAG-TTGT---------ATT-TTTTTTGTTGGTGT--G-----TTAAA----------------GATATGC-AAAATAATAAAC------------------------------------------------------------------------ACTA----------------------------------------------------------TTATAATTTAA------------------ATTAGT------TTATCA----ATAT------------------------AATT-------------------------------------------TAAATATGTATT---------------------TC-----------------------------------------------------------------------------AA-TAAT----------------AT-----------------TAATTCCAAGTGCACTT-----------------------AAAAATTAAAT----------------------------------------------------------------------------------------GTGAAATGTTCTTCAGAAACTTTTTTCTCTCT--CTCT----------------CTCTCTCTGTCTCT----CTCTATTTGTG-ACTCTC------------------TCTTTGCTCACA-ACTCAACTCA-----------------------------------------------CCTTTCCAGTC--GCAGCA---A-GTTCTTTGAGCCGCTCTTTGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
AG-----TTGGAAGACTGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTA-AGAAG--TGTTACCAAGAA-----------CC-CTTATTGT----------------A---TAATTCTGCCAAACTTACT--T-TAAAAACATGCGATTAC-------------------------------------------TAAGCCTTCA-ATAT-TTATT--------------------------------------------------------------------TAATTTTAGTAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATAATCAAGTTAA----TTAATGTTTAGAAAGATATTACCT---------------C-ATAAGTTTG--TTT---------------------------A-------AGCCATCTA---T--AAATACC----------------------------------------------------------------------------------------------------------------------------------------------CCT----------------CTTTCT----TCTT----TTTTTTTTGCCCTCTCTCT-------------------------------C--------TATTTTAGACTCTCCTCTCTGCTACCTGTTG----GAA-------------------G--TCAGC--------------AACCACTCTTTGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................CAGTTGGTTTGGACGTGTTCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
droBip1
AG-----TTGGAAGACTGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTA-AGAAG--TTTTAAAA-AAAT---------ATT-CTTT--------------------A----GATTCTATTAAGCTATCT--TTTTAAATCAAATTAATAA-------------------------------------------TAAATCTAAAAAGAG-GTATT--------------------------------------------------------------------ACATTTTATTACCTTTAAAAAAAAAG-----A------ATTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------GAATATAAAGATATTACCT---------------T-AAAAGT-TG--TTT---------------------------A-------AGCCATCTA---C--GAATAAC----------------------------------------------------------------------------------------------------------------------------------------TCT--CATT----------------CTTCTT----TTGG----CCC------------------------------------------TCT--CT------CTATTTTAGCCTCTCCTCTCTGCTACCTGTTG----GAA-------------------G--TCAGC--------------AACCACTCT-TGASizeHit CountTotal NormTotal
No Reads
droKik1
AG-----TTGGAACGGCGCGCTCAGTTGGTGTAGACGTGTTCGCGGAGGTT-GGTTT--GGACATCA-CAAA---------ATT---CTTGT--------------------------------------------------------------TTAATTAAAAAAAATAGC-TAACAGAAATTAGAATTAACTTTTAAACCTATAAAGTG-----------------------------------------------------------------------------------------------------------------TG--T----ATTTTATTTAAAGATGAAATATATAAAATAT------------------------GTGT-------------------------------------------------------------------------------------------------------------TTCCTTGCAAAA-------------T----GT-AATTCTGCTTT----------------------------------CCT--T--TAATATTA------------------------------------------------AATTTAGGTTTT-T---------TT---------------T-----------------G----------------------------TTT--TTCT----------------CTCTCTATACCATT----CTCTTTT--------CGTTTCCC---------------------------CT------GT---------------------TCT----CC----AAC-------------------C--ACAGCTCTT-----CCTAAAACCACTCT-TGASizeHit CountTotal NormTotal
No Reads
droFic1
AG-----TTGGAACAGCGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTT-AGCAG--TGTTACAA-TAATTTTATTAATTTT----TT----TATGT--G-----TAAAA-----------------------------------------------------------------------------------------------------------------------------------AATAGTTG------------------------------------------------------------------------------------------------------------------------------AAGTGCTGAAC--------------AGAT-------------------------------------------------AAACAAAAATTATAGTGGCTGTT----TAAA-ATAAATATTAC------------------TACTATTAAAAG----TTTTTC-TGATTTTCA-----TAAATATGTTTT-------AGTTTTTT-CTAACAAAGTTTTAA------------------------------------------TTC-------------T--GGTTAGT-TT-TTC----TCTCTA--C-----------------ACAAACCA--------------------------CTCT----------------CTAAAT----TATT----CTCTCTTTGTATTTTCTCT-------------------------------C-------------------------------------TA----TAA-------------------A--CCAGCTCTT-----ATCCAAGCCTCTCT-TTASizeHit CountTotal NormTotal
No Reads
droEle1
AG-----TTGGAACAGTGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTT-AGAAA--GAAT------------------ATA-----------------------TTT-------------------------------------------AA---------------------------------------------------------AAATTTAAGATCTTTTAATATAAA------------------------------------------------------------------------------------------------------------------------------------------------TGCAGTAT--------------AAAC-------------CAATAGTTTAAAAAACTAGTT-TC-------TATAACTAGA--------------------------------AAATT------------------CTAAATACAAAAGT--G--TTTGTATCTTT----------------------------------AA---AAGAAATACATT-T-----------------------------------T------C-------------------------------------TTGCTGTTGGTATTTCTATCTACGTGAAAGACACTCCATACTTTTCA----------------------------------------------------------------ATATCTC----------------------TCT--CT------GG-----------------------------------AA-------------------T--GAAACTCTT------------TCTCTCT----SizeHit CountTotal NormTotal
No Reads
droRho1
AG-----TTGGAACAGCGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTT-AGAAA--AAAG-------------------TT-CTTT-----------------------------------------------AAATTATCTTACAT------------------------------------------------------------------------TA----------------------------------------------------------AAATATATAAA------------------A----------ATAA-------CATA------------------------TCAT---------TTAAAATGCTTTAA--------------ATAT-------------------------------------------------TAGCAGTTTTTTGGGCAAAGCGT----TAAA-ACTTAAAATGC------------------GAATTACAAAAGT--G--TTTTCAGCTTT----------------------------------TA---A--AAATACCGT-T-----------------------------------G------T-------------------------------------TTGGTTTT---------------G-----------------------------------------------------------------------------TCATTTTCTCTCT------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AG-----TTGGAACAGCGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTT-AGCAG--TGTTC-------------------A-TTTGT------CGCTGATCATATCA-------------------------------------------AGAA--------------------A---------------------------------AGATCTAAAGTTCTTACAAACAGTA----------------------------------------------------------------------CA-AA-----------ATAAAA-GTTGAAAT------------------------TTAT--TACAATT-------ACTT-----------------------------------------------TAAAGC-TTTAG------------------------------------AG-----------------------------------------------------------------------------------TTACAATCTTCTT------T----GTCTTACATCTTT----------------TATGATGTCAATATTGTGAATAC-------------T--TGGTATCTACACAC----TCTCTGCCA-------------------------------------ATCT------C--TCTCTC---------------------------------------------TCTCTCTTCCTCTGATAAGTTTCCTTTTTAATGAAATATCCAATTTA-----------------------------------------------ATCTCTGGCTT-ACAAAAA---TATATTTTTAAGCC---------SizeHit CountTotal NormTotal
No Reads
droTak1
AG-----TTGGAACAGCGCGCTCAGTTGGTTTGGACGTGTTCGCGGAGGTT-AGAAG--TGTGC-------------------A-TATAT------CGCTTAG--------------------------------------------------------------AAAGATC-TGAAA---------------------------------AATATTAAAGTTCTTTAAAAAAATA----------------------------------------------------------------------TAGAA-----A------A-------------------------------------T--------------------------GTAT---------------------------CTTAAGTTTTATCAAATAATT-TCTGGCCCATAAAATTACA--------------------------------AAAAT------------------TTAATTA-AAAAGT--G--TCTTAAATTTT----------------------------------T--------------------------------------CATCGAGTTACAATTG----------------TATCT-T---------TA---------------T-----------------ATCAAACCTTCTCCTCGCTCTTCT------C--TCTCCC---------------------------------------------TCTCTC----------------------------------------------------------------------------------------------------------------------------TCTCT-CTGSizeHit CountTotal NormTotal
No Reads
droEug1
AGTTCAGTTGGAACAGCGCGCTCAGTTGGTTTAGACGTGTTCACGGAGGTT-AGTGG--TGTTAAAT-AAAT--------------TTTTGGTGATCGCTTAA------------------------------------------------------------GAAGTTACC-TATGA---------------------------------AATATTAAAGTTGTAG---------------------ACAAATATTCTGAAAATTACTGCA---------------------------------A--------------------AA--------------------------------------------AT--------------GTATCTTATTGTAAAGTTTTTAAATT----------------------------------------------------------------------------------------------------TTTATTTT-AAAAGT---------------------------------TTCTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
AG-----TTGGAACAGAGCGCTCAGTTGGTGAGGACGTGTTCGCGGAGGTA-AGTGA--CTACCGAA-GAAT---------ATT-----------------------TTA-------------------------------------------ATAAAGCATCTAAAATATCATATA-----------------------------AAATATGTATTAAAGTTTTTTGAAAA-------------------------------------------------------------------------------------------------------AA------------------------TATGTGTTGGATT--------------T---------------------------------------TTCCTAATTGTT-T------------------------------------ATTG------------------------TGTAAAATTTT-----------A--G--TTTTCAGTTTT----------------------------------AGC--C--AAATACCAA-T-----------------------------------T------TATAATCAAGTATCT-C---------TA---------------C-----------------A----------------------------TCT--CAAT----------------CTCACT----TTTA----CACTCTTGATATTCTCTCTTCCC----------------------TCC--CT------GG---------------------AAC----TG----AAA-------------------A--TCAGCTCCT-----AAC-AAACCACTCT-TGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................GCTCAGTTGGTGAGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000100000000000000001000000000000000000000000000000000000000000000000000101000200000000001000000000000000001000000
AG-----TTGGAACAGAGCGCTCAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020001010000000000000000000000000000000000000000000000000000000000000000001101000000000000000000000000000000000
AG-----TTGGAACAGAGCGCTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000001000000010000000201000000000000000000000000
...................GCTCAGTTGGTGAGGACGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200010000000000000000000000000000000000000000000000000000000000000000000000000001000000002000000000000000000000000
.....................TCAGTTGGTGAGGACGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100001000001000000110000000000000000000000000
.................................GACGTGTTCGCGGAGGTA-AGTGA--C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
AG-----TTGGAACAGAGCGCTCAGTTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000110000000001000000000000000000000000
.................................GACGTGTTCGCGGAGGTA-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000011000000000000000000000000
....................CTCAGTTGGTGAGGACGTGTTCGCGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GCGCTCAGTTGGTGAGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000001000000000000000000000000
........................GTTGGTGAGGACGTGTTCGCGGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003
.........................TTGGTGAGGACGTGTTCGCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000
AG-----TTGGAACAGAGCGCTCAGTTGGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.................................GACGTGTTCGCGGAGGTA-AGTGA--CTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000001000000000000000000000000
............................GTGAGGACGTGTTCGCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
................AGCGCTCAGTTGGTGAGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CTCAGTTGGTGAGGACGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
AG-----TTGGAACAGAGCGCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000010000000000
AG-----TTGGAACAGAGCGCTCAGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
AG-----TTGGAACAGAGCGCTCAGTTGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................GCTCAGTTGGTGAGGACGTGTTCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
....................CTCAGTTGGTGAGGACGTGTTCGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000
..................CGCTCAGTTGGTGAGGACGTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGGTGAGGACGTGTTCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CGCTCAGTTGGTGAGGACGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
...................GCTCAGTTGGTGAGGACGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AG-----TTGGAACAGAGCGCTCAGTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000
..................................ACGTGTTCGCGGAGGTA-AGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.............CAGAGCGCTCAGTTGGTGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................GACGTGTTCGCGGAGGTA-AG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................TTCGCGGAGGTA-AGTGA--C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................TCAGTTGGTGAGGACGTGTTCGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
................AGCGCTCAGTTGGTGAGGACGTGTTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................GCGGAGGTA-AGTGA--CTAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................CGCGGAGGTA-AGTGA--CTACCGAA-GAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCAGTTGGTGAGGACGTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGGTGAGGACGTGTTCGCGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CAGTTGGTGAGGACGTGTTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................GTTGGTGAGGACGTGTTCGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CGCTCAGTTGGTGAGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AGTTGGTGAGGACGTGTTCGCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................GTGTTCGCGGAGGTA-AGTGA--C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
AG-----TTGGAACAGAGCGCTCAGTTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................GTTGGTGAGGACGTGTTCGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................CGCGGAGGTA-AGTGA--CTACCGAA-A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGAGGACGTGTTCGCGGAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................GACGTGTTCGCGGAGGTA-AGTGA--CT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................CAGTTGGTGAGGACGTGTTCGCGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................CGCGGAGGTA-AGTGA--CTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGGTGAGGACGTGTTCGCGGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GGACGTGTTCGCGGAGGTA-AG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................GAGGACGTGTTCGCGGAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTTGGTGAGGACGTGTTCGCGGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AGGACGTGTTCGCGGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GTGAGGACGTGTTCGCGGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CTCAGTTGGTGAGGACGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................GCGCTCAGTTGGTGAGGACGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GAGGACGTGTTCGCGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
................................GGACGTGTTCGCGGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................GTTGGTGAGGACGTGTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCC--CT------GG---------------------AAC----TG----AAA-------------------A--TCAG............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GCGCTCAGTTGGTGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ACGTGTTCGCGGAGGTA-AGTGA--C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TACCGAA-GAAT---------ATT-----------------------TTA-------------------------------------------ATAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................A--CTACCGAA-GAAT---------ATT-----------------------TTA-------------------------------------------ATAAAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AACAGAGCGCTCAGTTGGTGAGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................GTGAGGACGTGTTCGCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AG-----TTGGAACAGAGCGCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................CTCAGTTGGTGAGGACGTGTTCGCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AGTTGGTGAGGACGTGTTCGCGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................GTGTTCGCGGAGGTA-AGTGA--CT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................AGGACGTGTTCGCGGAGGAT-C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AG-----TTGGAACAGAGCGCTCAGTTGGTGAGGACGTGTTCGCGGTCTAC-AGAAC------------AAT---------ATA-----------------------TTA-------------------------------------------ATAAAGTATCTAAAATATC-TAGAA---------------------------------TGTATTAAAGTTTTTTGAAATCGTA----------------------------------------------------------------------TACAA-----A------TTAAATGC--ACAA------------------------TATTTTTAGGATT--------------T---------------------------------------TTTCTAATCGTT-T------------------------------------ATTG------------------------CGTAAAATTTT-----------A--G--TATTCAGTTTT----------------------------------AAT--G--AAATACCAA-T-----------------------------------T------TATAACCAAGTGTCT-A---------TA---------------T-----------------A----------------------------TCC--CAAT----------------CTCACC----TATA----CACTCTTGATATTCTCTCTTCCC----------------------TCC--CT------GG---------------------AAC----TG----GAA-------------------A--TCAGCTCCT-----AAC-AAATCACTCT-TGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................CTCAGTTGGTGAGGACGTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00300000000000003000
...................GCTCAGTTGGTGAGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00211000000000000000
....................................GTGTTCGCGGTCTAC-AGAAC------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
.....................TCAGTTGGTGAGGACGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000000001000
.....................TCAGTTGGTGAGGACGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000001000
...........AACAGAGCGCTCAGTTGGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
................AGCGCTCAGTTGGTGAGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
...............GAGCGCTCAGTTGGTGAGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
..................CGCTCAGTTGGTGAGGACGTGTTCGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000100000
.....................TCAGTTGGTGAGGACGTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
AG-----TTGGAACAGAGCGCTCAGTTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000000000
...............GAGCGCTCAGTTGGTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
...................GCTCAGTTGGTGAGGACGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
...................GCTCAGTTGGTGAGGACGTGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
...............GAGCGCTCAGTTGGTGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................TTTAGGATT--------------T---------------------------------------TTTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000000010000000
droSec2
AG-----TTGGAACAGAGCGCTCAGTTGGTGAGGACGTGTTCGCGGTCTCC-AGAAG--AA----------T---------ATA-----------------------TTA-------------------------------------------ATAAAGTATCTAAAATATC-TAGAA---------------------------------TGTATTAAAGTTTTTTGAATTCGTA----------------------------------------------------------------------TACAA-----A------TAAAATGC--ACAA------------------------TATTTGTAGGATT--------------T---------------------------------------TTTCTAATCGTT-T------------------------------------ATCG------------------------CGTAAAATTTT-----------A--G--TTTCCGGTTTT----------------------------------AAC--A--AAATACCAA-T-----------------------------------T------TATAACCAAGAATCT-A---------TA---------------T-----------------A----------------------------TCC--CCAT----------------CTCACT----TGTA----CACTCTTGATATTCTCTCTTCCC----------------------TCC--CT------GG---------------------AAC----TG----GAA-------------------A--TCAGCTCCT-----AAC-AAATCACTCT-TGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............GAGCGCTCAGTTGGTGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020011
..............AGAGCGCTCAGTTGGTGAGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
...................GCTCAGTTGGTGAGGACGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
AG-----TTGGAACAGAGCGCTCAGTTGGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
....................CTCAGTTGGTGAGGACGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
...............GAGCGCTCAGTTGGTGAGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
AG-----TTGGAACAGAGCGCTCAGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
..............................GAGGACGTGTTCGCGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
droYak3
AG-----TTGGAAACGCGCGCTCAGTTGGTGAGGACGTGTTCGCGGAGGTA-AGTCAGTCTGCAGAA-AAAT---------ATT-----------------------TTA-------------------------------------------GCCAAGTAACCAAAATATC-TATAA---------------------------------TGTATTAAAGTTCTTTAAAAACGTA----------------------------------------------------------------------TAAAG-----A------ATGTATGA--ATAA------------------------TAATTATAGAAT---------------T---------------------------------------TTTCTAATTTGA-A------------------------------------AAGG------------------------CGTACAGTCCT-----------A--G--TATTCAGTTTC----------------------------------TAC--C--AAATATGAA-T-----------------------------------G------TATAACCAAGTCTCT-A---------TA---------------C-----------------A----------------------------TCT--C-AT----------------CTCTCT----TATATTCATATTCTTCATATTCTCTCTTTCT----------------------TCC--CT------G-----------------------------------GAA-------------------G--TCAGCTCCT-----AACTAAGCCACTCT-TGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................TGGTGAGGACGTGTTCGCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
................................GGACGTGTTCGCGGAGGTA-AGTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
............................GTGAGGACGTGTTCGCGGAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.................................GACGTGTTCGCGGAGGTA-AGTCAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
................CGCGCTCAGTTGGTGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000
droEre2
AG-----TTGGAACAGCGCGCTCAGTTGGTGAGGACGTGTTCGCGGAGGTA-AGTAT--CTACAGAA-GAAT---------ATT-TTTTT-------------------A-------------------------------------------GTTAGGTAGCCAAAATATC-TATAA---------------------------------TGTATTAAAGTTCTTTTAGAGCGTA----------------------------------------------------------------------TC-AA-----A------TTATAT----ATAC------------------------TATTTATAGGATT--------------T----------------------------------------TTTTAACAT-TTACG------------------------------------GG------------------------CGCACAATTTT-----------T--G--TTTTCAGTTTT----------------------------------TAC--C--AAATATCAA-T-----------------------------------G------TACAACCAAGCCTCT-A---------TA---------------T-----------------A----------------------------TCT--CTAT----------------CTCTCT----TATC----CCCTCTTTATATTCTCTCTTCCC----------------------TCC--CT------G-----------------------------------GAA-------------------A--ACAGCTCCT-----AACTAAACCACTCT-TCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................TGAGGACGTGTTCGCGGAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
...............GCGCGCTCAGTTGGTGAGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.......................................TTCGCGGAGGTA-AGTAT--CTACAGAA-GAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000001
..........................TGGTGAGGACGTGTTCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000

Generated: 05/17/2015 at 10:26 PM