ID:

dps_447

 Coordinate:

2:9900883-9901033 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.5 -9.5 -9.4 -9.4

Flybase annnotation

five_prime_UTR [Dpse\GA21376-u5]; exon [Dpse\GA21376:3]; intron [Dpse\GA21376-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AAGTTAGTTTTGCTAGACACTCGAATACACGGCAGCAATTGATTTCACAGGTAAGTGGCGACTCTGCAAATAATTCCGTTGGTCTAATATGGCAGGTTTCGTTTTGCATTCCCATTGTGTGTGTATTTGGTGGACTTCTCTTGCCTTTCCGCTTTTGTTAAGTAATCAGCGATAATTAATTTTTCGTCAGCCAACGAGATGGGCTACGAAAATTGCATTTTACACATTCTTTTGTAAAATCGATTGAACTT
**********************************************************...................(((.....(((((.(((((......)))))...............))))).....)))******************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 SRR902012
CNS imaginal disc
 M059
embryo
 V112
male body		 M062
head
 GSM343916
embryo
..........TGCTAGACACTCGAATACACGGCAG........................................................................................................................................................................................................................ 25 0 1 13.00 13 0 12 1 0 0 0 0 0
..........TGCTAGACACTCGAATACACGGCAGCA...................................................................................................................................................................................................................... 27 0 1 5.00 5 0 2 2 1 0 0 0 0
.........TTGCTAGACACTCGAATACACGGCAGC....................................................................................................................................................................................................................... 27 0 1 5.00 5 0 5 0 0 0 0 0 0
...........GCTAGACACTCGAATACACGGCAGCA...................................................................................................................................................................................................................... 26 0 1 3.00 3 0 0 0 3 0 0 0 0
.........TTGCTAGACACTCGAATACACGGCAG........................................................................................................................................................................................................................ 26 0 1 3.00 3 0 3 0 0 0 0 0 0
.........................TACACGGCAGCAATTGATTTCACAGT........................................................................................................................................................................................................ 26 1 1 3.00 3 0 0 3 0 0 0 0 0
..........TGCTAGACACTCGAATACACGGCAGC....................................................................................................................................................................................................................... 26 0 1 2.00 2 0 1 1 0 0 0 0 0
............CTAGACACTCGAATACACGGCAGCA...................................................................................................................................................................................................................... 25 0 1 2.00 2 0 0 0 2 0 0 0 0
..........TGCTAGACACTCGAATACACGG........................................................................................................................................................................................................................... 22 0 1 2.00 2 0 2 0 0 0 0 0 0
..............................GGCAGCAATTGATTTCACA.......................................................................................................................................................................................................... 19 0 1 2.00 2 0 0 0 0 0 0 1 1
.............TAGACACTCGAATACACGGCAGCAA..................................................................................................................................................................................................................... 25 0 1 2.00 2 0 2 0 0 0 0 0 0
AAGTTAGTTTTGCTAGACACTCGAAT................................................................................................................................................................................................................................. 26 0 1 2.00 2 1 0 0 0 1 0 0 0
............CTAGACACTCGAATACACGGC.......................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 1 1 0 0 0 0
..............AGACACTCGAATACACGGC.......................................................................................................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0
..........................................................CGACTCTGCAAATAATTCCGT............................................................................................................................................................................ 21 0 1 2.00 2 2 0 0 0 0 0 0 0
.AGTTAGTTTTGCTAGACACTCGAAT................................................................................................................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0 0 0 0
.........TTGCTAGACACTCGAATACACGGC.......................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0
...........GCTAGACACTCGAATACACGGCAGC....................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0
..........................................TTTCACAGGTAAGTGGCGACT............................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0
...............GACACTCGAATACACGGCAGCAATTG.................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0
........TTTGCTAGACACTCGAATACA.............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................GATGGGCTACGAAAATTGC................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0
............CTAGACACTCGAATGCACGGC.......................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................GTGTGTGTATTTGGTGGAC.................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0
.............TAGACACTCGAATACACGG........................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0
..........TGCTAGACACTCGAATACACGGCAGCAAT.................................................................................................................................................................................................................... 29 0 1 1.00 1 0 0 1 0 0 0 0 0
..........TGCTAGACACTCGAATACACGGCAGCAA..................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................................................GTATTTGGTGGACTTCTCTTG............................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................ATTGTGTGTGTATTTGGTGG...................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
...TTAGTTTTGCTAGACACTCGA................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0
.............................................CACAGGTAAGTGGCGACTCTG......................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..GTTAGTTTTGCTAGACACTCGAA.................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0
.AGTTAGTTTTGCTAGACACT...................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0
.........................................ATTTCACAGGTGAGTGGCGAC............................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0
..........TGCTAGACACTCGAATACACGGCA......................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................CACAGGTAAGTGGCGACTCTGC........................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0
...........GCTAGACACTCGAATACACGGCAGGA...................................................................................................................................................................................................................... 26 1 1 1.00 1 0 0 0 1 0 0 0 0
.............................................................................................................................................................TTAATTAATCAGCGATAATTA......................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0
............CTAGACACTCGAATACACGG........................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................CACGGCAGCAATTGATTTCACAGG........................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 1 0 0 0
....................................................................AATAATTCCGTTGGTCTAATA.................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................TTAAGTAATCAGCGATAATTA......................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.............TAGACACTCGAATACACGGC.......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
........................ATACACGGCAGCAATTGATTTCACAGT........................................................................................................................................................................................................ 27 1 1 1.00 1 0 0 0 0 0 1 0 0
..................................................................................................................TTGTGTGTGTATTTGGTGGA..................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................GCAGCAATTGATTTCACAG......................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................GTGTGTGTATTTGGTGGACT................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TTTGTAAAATCGATTGAACTT 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..GTTAGTTTTGCTAGACACTCG.................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..........TGCTAGACACTCGAATACACGGCAGGA...................................................................................................................................................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0
...............GACACTCGAATACACGGCA......................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................ATTTCACAGGTGGGTGGCGAC............................................................................................................................................................................................. 21 2 1 1.00 1 0 0 0 0 0 1 0 0
..........................................................................................................................................................................................TCAGCCAACGAGATGGGCT.............................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0
.........TTGCTAGACACTCGAATACACGGCA......................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................................TGTGTGTATTTGGTGGACTT.................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................AATTTTTCGTCAGCCAACGA...................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................................CTTCTCTTGCCTTTCCGCTTTT............................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................GATTTCACAGGTAAGTGG................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................................ACTTCTCTTGCCTTTCCGCTT................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
........................ATACACGGCAGCAATTGATTT.............................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
AAGTTAGTTTTGCTAGACACTC..................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................TTAATTTTTCGTCAGCCAACG....................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................TTGTGTGTGTATTTGGTGGAC.................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................GTCAGCCAACGAGATGGGCT.............................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................ACAGGTAAGTGGCGACTCTG......................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................TTCCGTTGGTCTAATATGGCA............................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0 0 0
.....................................................................................................................................................CGCTTATGTTTAGTAATAAGC................................................................................. 21 3 4 0.25 1 0 0 0 0 1 0 0 0
.........................................................................................................................................................................CGATTATTAGTTTTTCGCCAG............................................................. 21 3 11 0.09 1 1 0 0 0 0 0 0 0
..............AAACACTGGAATACAAGGCA......................................................................................................................................................................................................................... 20 3 14 0.07 1 1 0 0 0 0 0 0 0

Anti-sense strand reads

TTCAATCAAAACGATCTGTGAGCTTATGTGCCGTCGTTAACTAAAGTGTCCATTCACCGCTGAGACGTTTATTAAGGCAACCAGATTATACCGTCCAAAGCAAAACGTAAGGGTAACACACACATAAACCACCTGAAGAGAACGGAAAGGCGAAAACAATTCATTAGTCGCTATTAATTAAAAAGCAGTCGGTTGCTCTACCCGATGCTTTTAACGTAAAATGTGTAAGAAAACATTTTAGCTAACTTGAA
********************************************************************************************************************...................(((.....(((((.(((((......)))))...............))))).....)))********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 SRR902011
testis
 M062
head
 GSM444067
head
 GSM343916
embryo
...........................................................................GGCAACCAGATTATACCGTCC........................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
...........................................AAGTGTCCATTCACCGCTGAG........................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................CTGAAGAAACCGGAACGGCGA.................................................................................................. 21 3 2 1.00 2 1 1 0 0 0 0
.........................................................................AAGGCAACCAGGTTATACCG.............................................................................................................................................................. 20 1 1 1.00 1 1 0 0 0 0 0
...........................................................................TGCAACCAGGTTGTACCGTCC........................................................................................................................................................... 21 3 1 1.00 1 1 0 0 0 0 0
..........................................................GCTGAGACGTTTATTAAGGCA............................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
....ATCAAAACGATCTGTGAGCTT.................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0
........AAACGATCTGTGAGCTTATG............................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................................GTTGCTCTACCCGACGCTTTT....................................... 21 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................GGTTGCTCTACCCGATGCTT......................................... 20 0 1 1.00 1 1 0 0 0 0 0
........AAACGATCTGTGAGCTTATGT.............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................TCCAAAGCAAAACGTAAGGGT......................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0
.....TCAAAACGGTCTGTGAGCTTA................................................................................................................................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
...........................GTGCCGTCGTTAACTGGAGTG........................................................................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..........ACGATCTGTGAGCTTATGT.............................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
....................AGCTTATGTGCCGTCGTTGAC.................................................................................................................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
.........................................TAAAGTGTCCATTCACCGCTG............................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0
..............................................................................................................................................................................................................GCTTTTAACGTAAAATGTGTA........................ 21 0 1 1.00 1 1 0 0 0 0 0
.........................................................CGCTGAGACGTTTATTAAGGC............................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
......................CTTATGTGCCGTCGTTAACTA................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................ATACCGTCCAAAGCAGAACGT............................................................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
.........................................................CGCTGAGACGGTTATTAAGGC............................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
......................................................CACCGCTGAGACGTTTATTA................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................ACGGGAAGGCGAAAACAATTC......................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................GAACGGAAAGGCGAAAACAAT........................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................ACCACCTGAAGAGAACGGAA........................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
....ATTAAAACGATCTGTGAGCTTC................................................................................................................................................................................................................................. 22 2 1 1.00 1 0 0 1 0 0 0
...........................GTGCCGTCGTTAACTAAAGTGTC......................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
...........CGATCTGTGAGCTTATGTG............................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
........................................................................TGAGGCAAGTAGATTATAC................................................................................................................................................................ 19 3 18 0.06 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:9900833-9901083 - dps_447 AAG--------------------T--TAGT------------------------TT---TGCT---AGACACTCGAATACACGGC-AGCAATTGATT------TCACAGGTAAGTGGCG---ACTCT-GCAAA--------T------AATT--CCGTTGGTCTAATATGGCAGGTTTCGTTTTGCATT--------C-------------------C-----CAT--TGTGTGTGTATTTG-GTGGA--C--TTCTCTTGCCTTTC-CGC------------------TTTTGTTAAGTAATCAGCG--ATAAT-T--AATTTTT---CGTCAGCCA-A-CGAG---------------ATGGG--------CTACGAAAATTG----------CATTT--TAC---------ACATT-CTTTTGTAAAATCGATTGA--ACTT
droPer2 scaffold_0:10582419-10582668 + AAG--------------------T--TAGT------------------------TT---TGCT---AGACACTCGAATACACGGC-AGC-GTTGATT------TCAAAGGTAAGTGGCG---AGTCT-GCAAA--------T------AATT--CCGTTGGTCTAATATGGCAGATTTCGTTTTGCATT--------C-------------------C-----CAT--TGTGTGTGTATTTG-GTGGA--C--TTCTCTGGCCTTTC-CGC------------------TTTTGTTAAGTAATCAGCG--ATAAT-T--AATTTTT---CGTCAGCCA-A-CGAG---------------ATGGG--------CTACGAAAATTG----------CATTT--TAC---------ACATT-CTTTTGTAAAATCGATTGA--ACTT
droWil2 scf2_1100000004943:6281307-6281572 + AAATATTAAAGGCGCTGCTATAGTTTCATT------------------------TT---TGTC---CGACACA------CGTAAT-ACAC-----------A-ACAAAGGTAAGTCAGGGT---------AA--------TTAATT--GATTTTCCG-----C--TTTTTGCAGATTTCGTTTTGCACGCTTATTACG--AG-CGT--A-------------TGTGTGTGTGCATGTATGTG-GTGGA--TAGTT------TTTTTG-GGCTACCT-------------TTTTGTTAAGTAATCAGAGCTATAGT-T--AATTTAT---TTTCC---AAG--------------------AT-------------------GAAA---AATCTAAAATTC--CTG-------C-CCCGTAAATTTGTAAAATCAATGGA--AATC
droVir3 scaffold_12855:2942892-2943156 - AAA--------------------A--CGGTATACATATATATATATATATAACTAT---TAGAAC-AAATACTCGAATACTCGGCGAACTACTGCA-----A-TAAAAGGTGAGAGCAA----CTAA-GCAA----TGAACTAATTAT---TT-CCG--------------CA----------GGCATT--------T-------------------A-----CAT--TGTGTGTGTATTTG-GTAC------TA------CATTTT-TGCCCACT-------------CTTTGTTAAGTAATCATAG--GTAAT-TGTAATTTTT---CCCTACGCA-A-GCAG---------------TTGGTGAACTTTGGTGCG-TCGATG----------CACTG-CTGC---------AC----ATTTTGCAAAATCGATTCA--AGCC
droMoj3 scaffold_6540:10262414-10262567 + GCA--------------------T--TTTCA-----------------------TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGTGTGTGTATTTG-ATGAT--TA----------GTTTT-TGCCCAGT-------------CTTTGTTAAGTAATCATAG--GGAATATATAATTTTT---ATATTT----------------GCGTCGTAGTT--------------AG-TAATTG----------CACTATGT-TACGCCTGATGCACT-ATTTTGCAAAATCGATTCA--AGTC
droGri2 scaffold_14906:3725166-3725439 + AAG--------------------T--GTACATATATACATATATATATATAGTTAT---TTCAAT-AGACACTA--ATAACCTCG-AACTTCTGCTA------TCAAAGGTGAGACCAA----TTACAGAAAATAATTG-------------A-CTA----ACAAATTTCCCGCAGGCATTTTTGCATT--------GT------------------------G--TGTGTGTGTGTCTTTA-GTACC--TA-----------TTTT-TGCTCGACT------------CTTTGTTAAGTAATCAAGT--ATAAT-T--AATTTTT---TTTTT-CCA-A-GTAGTTCGATGCATCATA--------------GTGCG-TCATTA----------GACTG-GT-T---------AC----ACTTTGCAAAATCGATTGA--GTTG
droAna3 scaffold_13340:1766781-1767028 + AAG--------------------T--CC--A-----------------------TTTAGTCCTAT-AAACA--------CACGAC-ACCAATTCTAGACGCAGAAAAAGGTAAAAA---------------------------------------------ATAGATTTTGCACATTTCGCCTTGT-----CGCTACGAAAA-AAA--A---AATTCCC----GTGTCTGTGTGTGTATGAGTGTACA--CACTT------CCTTTT-CCCCCATTTTTTTCAT-CTCATCTCGTTAAGTAATCGCCG--ATAAT-T--GTTAATTCTATGCCA-----G----------------------------------------ACACAATTTTCCTACGAATT----G---------A-----CGTTTGTAAAATCGATGGA--ATCG
droBip1 scf7180000396712:2565905-2566149 - AGC--------------------T--GCAAA-----------------------TTT-TTCATTCAA---AACA-----CACAAC-ACCAACTTGAG------ACGCAGATAAAAGGTA-------A--------------------AG-----AAA----AAAAATTTTGCACATTTCGCCTTGT-----CGCTACGAGAA-AAT--T-------CCC----GTGTCTGTGTGTGTATGCGTGAACA--CACTT------CCTTTT-CCCCT--TTTTTCCAT-CTCTTCTCATTAAGTAATCGCCG--ATAAT-T--GTTAATTCA---ACG--C--GACA-------------------------------------AGATT---TTCCAACAAAGT--TT----------------CCCTTGTAAAATCGATGGA--ATTG
droKik1 scf7180000302392:619663-619895 - ATA--------------------T--CCGTT-----------------------AT---TTCTTT-AGGCA--------CACAAC-ACGA-----------G-GAAGAGGTAAGAGGCA------------T----TCGGAT-------ATTT-TCA----AGTGATTTTGCACATTTCGCTTCCCATT-----TTCGTGAG-AGT--G-------------TATGCATGTGTGTGTATTTG-GTAGA--CACTT------CCTTTT-TCCTCTGTTCT--TT------TTTCGTTAAGTAATCAACG--ATAAT-T--GTTTTTTTT----GT-----G----------------------------------------TGATG---CGCTTTTGGTTT--TTG---------G-----GTTTTGTAAAATCGATGGC--CCTC
droFic1 scf7180000453906:293830-293957 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGTACTTG-GTAGA--CACTT------CCTTTT-CACCAGGTTCT----T-TTC-CGCCGTTAAGTAATCGGCC--ATGGT-T--GCTTTCTGC----GA-----A----------------------------------------GGTTT---TATTTTCCATTT--TCG---------GTGTTAGTTTTGCAAAATCGATGGC--CCTC
droEle1 scf7180000491261:40997-41242 - AAG--------------------T--GCCCAT----------------------TT---TGCTTT-AGACACTA-----CACGTT-ACGC-----------G-GAAAAGGTGAGTTACG------------G----TGGGTTAACTATAATT--CCA----CCTGATTTTGCCCATTTCGCTTTGAATT--------GGGCA-AATGTG-------------TGAGTGTGCGTGTGCACTTG-GTAGA--CACTT------CCTTTT-CGCTTGATTCT--CTT-TTT-TCCCGTTAAGTAATCAGCG--ATAAT-T--GATTTCGGC----CA-----A----------------------------------------AGATT---TCGCTTCGATTT--TTG---------GCCATAGTTTTGCAAAATCGATGG-------
droRho1 scf7180000779659:509197-509444 - AAG--------------------T--GCCTA-----------------------TT---TGCTTT-AGACTCGA-----CACGAC-ACGA-----------A-GGAAAGGTGAGTTTCG------------G----TGGGCTAATTATAATT--CCA----CCTGATTTTGCACATTTCGCATTGCATT--------GTGGG-AATGTG-------------TGAGTGTACGTGTGTACTTG-GTAGA--CACTT------CCTTTT-CGCTTGATTC--TCAT-TTT-TCCCGTTAAGTAATCAGCG--ATAAT-T--GTTTTCTAT----AC-----G----------------------------------------AGTTT---TCGCTTCGATTT--TTG---------GCTTTGGTTTTGCAAAATCGATGGC----TC
droBia1 scf7180000302402:8937718-8937850 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGTGCACTTG-GTAGACACACTT------TCCT-T-CGCTGCGTTCT--TTT-CCC-CACCGTTAAGTAATCAGCG--AGG-C-T--GGTTTTCGC----CA-----G----------------------------------------GGATC---TGCCCTTGGTTC--TTG---------GCCCTAGACTTGCAAAATCGATGGC--CCCG
droTak1 scf7180000415653:180179-180449 - AAG--------------------T--CTCCA-----------------------TT---TGCTTT-AGACACGA-----TACGAC-ACGA-----------G-GAAAAGGTGAGTGGCG-CTG---CG---G----TGGCTTAATTTCGATTT-CCA----CCTGATTTTGCACATTTCGCTTCGCATT--------GTGCG-AATGAGTGAGGCTGTTGTGTGCGTGTGTGTGTGTACTTG-GTAGACACACTT------CCTTTT-CGCTTGATTCT--TTTTCTT-TACCGTTAAGTAATCAGCG--ATAAT-T--GTTTTTCGC----CA-----G----------------------------------------AGAAT---TCCCTTCGATT---TTG---------GCCTTAGATTTGCAAAATCGATGGC--TCTC
droEug1 scf7180000409802:799745-799985 - AAG-------------------GT--TCCAA-----------------------TT---TAATTC-AGACACGA-----CAAAAC-ACAA-----------ATAAAAAGGTAAGTTCCACT-T---CA---T----AGGGTTAGTT------T-CCA-------CATTTTGCACATTTCTTTTCCCATT--------GTGAA-TATGAG-------------TGTGTTTGTGTGTGTACTTG-GTAGA--CACTT------CATTTC-GCTTTGATTTT------CTT-TACCGTTAAGTAATCAGCG--GTAAT-T--GTTTTTTGC----TA-----G----------------------------------------ACATT---CCTCTTACATTT--TTG---------ACCATAGTTTTGCAAAATCGATGG-------
dm3 chr3R:9207940-9208199 + AAG--------------------T--TACTA-----------------------TT---TGCTTT-AGGCACGA-----CACGAC-ACGA-----------A--AAAAGGTGAGCTGGGGCGG---CT---C----TGGGCTAATTAAGATTA-CCA----CCTGATTTTGCACATTTCGTCTCGCATT--------GTGCGGTTT--G-------------CCAATGTGTGTGTCTACTTG-GTAGA--CACTT------CCTTTG-CGCTTGGTTTTCTCAT-CTC-TGTCGTTAAGTAATCATCG--ATAAT-T--GTTTTTTGT----CA-----G----------------------------------------AGAAT--TTGCCTTCGATTT--TTG---------GCATTAGATTTGCAAAATCGATGGCCATCTA
droSim2 3r:11971663-11971913 - AAG--------------------T--TACCA-----------------------TT---TGCTTT-AGGCACGA-----CACGAC-ACGA-----------A--AAAAGGTGAGCTGGGGCGG---CG---C----TGGGCTAATTAAGATTA-CCA----CCTGATTTTGCACATTTCGCCTCGCATT--------GTGCG-ATT--G-------------CCAATGTGTGTGTCTACTTG-GTAGA--CACTT------CCTTTG-CGCTTGGTTTTCTCAT-CTC-TACCGTTAAGTAATCAGCG--ATAAT-T--GTTTTTTGC----CA-----G----------------------------------------AGAAT---CGCCTTCGATTT--TTG---------GCATTAGTTTTGCAAAATCGATGG-------
droSec2 scaffold_0:12797328-12797578 - AAG--------------------T--TACCA-----------------------TT---TGCTTT-AGGCACGA-----CACGAC-ACGA-----------A--AAAAGGTGAGCTGGGGCGG---CG---C----GGGGCTAATTAAGATTA-CCA----CCTGATTTTGCACATTTCGCCTCGCATT--------GTGCG-ATT--G-------------CCAATGTGTGTGTCTACTTG-GTAGA--CACTT------CCTTTG-CGCTTGGTTTTCTCAT-CTC-TACCGTTAAGTAATCAGCG--ATAAT-T--GTTTTTTGC----CA-----G----------------------------------------AGAAT---CGCCTTCGATTT--TTG---------GCATTAGTTTTGCAAAATCGATGG-------
droYak3 3R:13514357-13514608 + AAG--------------------T--TACCA-----------------------TT---CGCTTT-AGGTACGA-----CACGAC-ACGA-----------A-GAAAAGGTAAGCTGCGGTTT---TG---C----TGGGCTAATTAAAATTA-CCA----CCTGATTTTGCACATTTCGCTTCGCATT--------GTGCG-TTT--G-------------CCAATGTGTGTGTCTACTTG-GTAGA--CACTT------CCTTTTGCGCTTGGTTTCCTCAT-CTC-TACCGTTAAGTAATCAGCG--ATAAT-A--GTTT-TTGC----CG-----G----------------------------------------AGATT---CGCCTTCGATTT--TTG---------GCATTAGTTTTGCAAAATCGATGG-------
droEre2 scaffold_4770:12433994-12434243 - AAG--------------------T--TACAA-----------------------TT---CGCTTT-AGGCACGA-----CACGAC-ACGA-----------G-GAAAAGGTAAGCTGCAGTGC---CG---C----TGGGCTAATTAAAATTA-CCA----CCTGATTTTGCACATTTCGCATCGCATT--------G--AG-TTT--G-------------CCAATGTGTGTGTCTACTTG-GTAGA--CACTT------CCTTTG-CGCTTGCTTTTCTCAT-CTC-TACCGTTAAGTAATCAGCG--ATAAT-T--GTTTTTTGC----CA-----G----------------------------------------AGATT---TGCCTTCGATTT--TTG---------GCATTAGTTTTGCAAAATCGATGG-------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
AAG--------------------T--TAGT------------------------TT---TGCT---AGACACTCGAATACACGGC-AGCAATTGATT------TCACAGGTAAGTGGCG---ACTCT-GCAAA--------T------AATT--CCGTTGGTCTAATATGGCAGGTTTCGTTTTGCATT--------C-------------------C-----CAT--TGTGTGTGTATTTG-GTGGA--C--TTCTCTTGCCTTTC-CGC------------------TTTTGTTAAGTAATCAGCG--ATAAT-T--AATTTTT---CGTCAGCCA-A-CGAG---------------ATGGG--------CTACGAAAATTG----------CATTT--TAC---------ACATT-CTTTTGTAAAATCGATTGA--ACTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................TGCT---AGACACTCGAATACACGGC-AG.....................................................................................................................................................................................................................................................................................................................................................................25113.001300000001210
...........................................................TGCT---AGACACTCGAATACACGGC-AGCA...................................................................................................................................................................................................................................................................................................................................................................2715.0050000000221
.......................................................T---TGCT---AGACACTCGAATACACGGC-AGC....................................................................................................................................................................................................................................................................................................................................................................2715.0050000000500
............................................................GCT---AGACACTCGAATACACGGC-AGCA...................................................................................................................................................................................................................................................................................................................................................................2613.0030000000003
.......................................................T---TGCT---AGACACTCGAATACACGGC-AG.....................................................................................................................................................................................................................................................................................................................................................................2613.0030000000300
.............................................................................TACACGGC-AGCAATTGATT------TCACAGT...............................................................................................................................................................................................................................................................................................................................................2613.0030000000030
...........................................................TGCT---AGACACTCGAATACACGGC-AGC....................................................................................................................................................................................................................................................................................................................................................................2612.0020000000110
.............................................................CT---AGACACTCGAATACACGGC-AGCA...................................................................................................................................................................................................................................................................................................................................................................2512.0020000000002
...........................................................TGCT---AGACACTCGAATACACGG.........................................................................................................................................................................................................................................................................................................................................................................2212.0020000000200
..................................................................................GGC-AGCAATTGATT------TCACA.................................................................................................................................................................................................................................................................................................................................................1912.0020001100000
..............................................................T---AGACACTCGAATACACGGC-AGCAA..................................................................................................................................................................................................................................................................................................................................................................2512.0020000000200
AAG--------------------T--TAGT------------------------TT---TGCT---AGACACTCGAAT...............................................................................................................................................................................................................................................................................................................................................................................2612.0020110000000
.............................................................CT---AGACACTCGAATACACGGC-.......................................................................................................................................................................................................................................................................................................................................................................2112.0020000000011
..................................................................AGACACTCGAATACACGGC-.......................................................................................................................................................................................................................................................................................................................................................................1912.0020200000000
.....................................................................................................................CG---ACTCT-GCAAA--------T------AATT--CCGT...............................................................................................................................................................................................................................................................................................2112.0020200000000
.AG--------------------T--TAGT------------------------TT---TGCT---AGACACTCGAAT...............................................................................................................................................................................................................................................................................................................................................................................2512.0020200000000
.......................................................T---TGCT---AGACACTCGAATACACGGC-.......................................................................................................................................................................................................................................................................................................................................................................2411.0010000000100
............................................................GCT---AGACACTCGAATACACGGC-AGC....................................................................................................................................................................................................................................................................................................................................................................2511.0010000000001
...............................................................................................TT------TCACAGGTAAGTGGCG---ACT................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................................................................GACACTCGAATACACGGC-AGCAATTG...............................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
......................................................TT---TGCT---AGACACTCGAATACA............................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................G---------------ATGGG--------CTACGAAAATTG----------C.................................................1911.0010010000000
.....................................................................................................................................................................................................................................GTGTGTGTATTTG-GTGGA--C--................................................................................................................................................................................................1911.0010000001000
..............................................................T---AGACACTCGAATACACGG.........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000010
...........................................................TGCT---AGACACTCGAATACACGGC-AGCAAT.................................................................................................................................................................................................................................................................................................................................................................2911.0010000000010
...........................................................TGCT---AGACACTCGAATACACGGC-AGCAA..................................................................................................................................................................................................................................................................................................................................................................2811.0010000000100
...........................................................................................................................................................................................................................................GTATTTG-GTGGA--C--TTCTCTTG........................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................AT--TGTGTGTGTATTTG-GTGG......................................................................................................................................................................................................2011.0010100000000
.......................T--TAGT------------------------TT---TGCT---AGACACTCGA.................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
........................................................................................................CACAGGTAAGTGGCG---ACTCT-G............................................................................................................................................................................................................................................................................................................................2111.0010100000000
..G--------------------T--TAGT------------------------TT---TGCT---AGACACTCGAA................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.AG--------------------T--TAGT------------------------TT---TGCT---AGACACT....................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
...........................................................TGCT---AGACACTCGAATACACGGC-A......................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
........................................................................................................CACAGGTAAGTGGCG---ACTCT-GC...........................................................................................................................................................................................................................................................................................................................2211.0010100000000
.............................................................CT---AGACACTCGAATACACGG.........................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................................................................CACGGC-AGCAATTGATT------TCACAGG...............................................................................................................................................................................................................................................................................................................................................2411.0010010000000
...................................................................................................................................AA--------T------AATT--CCGTTGGTCTAATA.....................................................................................................................................................................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................................................................................................TTAAGTAATCAGCG--ATAAT-T--A.............................................................................................................................2111.0010100000000
..............................................................T---AGACACTCGAATACACGGC-.......................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................ATACACGGC-AGCAATTGATT------TCACAGT...............................................................................................................................................................................................................................................................................................................................................2711.0010000001000
.................................................................................................................................................................................................................................T--TGTGTGTGTATTTG-GTGGA--...................................................................................................................................................................................................2011.0010100000000
...................................................................................GC-AGCAATTGATT------TCACAG................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.....................................................................................................................................................................................................................................GTGTGTGTATTTG-GTGGA--C--T...............................................................................................................................................................................................2011.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTAAAATCGATTGA--ACTT2111.0010100000000
..G--------------------T--TAGT------------------------TT---TGCT---AGACACTCG..................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................................................................GACACTCGAATACACGGC-A......................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...........................................................................................................................................................................................................................................................................................................................................TCAGCCA-A-CGAG---------------ATGGG--------CT......................................................................1911.0010100000000
.......................................................T---TGCT---AGACACTCGAATACACGGC-A......................................................................................................................................................................................................................................................................................................................................................................2511.0010000000100
......................................................................................................................................................................................................................................TGTGTGTATTTG-GTGGA--C--TT..............................................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................AATTTTT---CGTCAGCCA-A-CGA.....................................................................................................2011.0010100000000
..........................................................................................................................................................................................................................................................C--TTCTCTTGCCTTTC-CGC------------------TTTT........................................................................................................................................................2211.0010100000000
.............................................................................................GATT------TCACAGGTAAGTGG........................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.......................................................................................................................................................................................................................................................A--C--TTCTCTTGCCTTTC-CGC------------------TT..........................................................................................................................................................2111.0010100000000
............................................................................ATACACGGC-AGCAATTGATT------T.....................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
AAG--------------------T--TAGT------------------------TT---TGCT---AGACACTC...................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..........................................................................................................................................................................................................................................................................................................................T-T--AATTTTT---CGTCAGCCA-A-CG......................................................................................................2111.0010100000000
.................................................................................................................................................................................................................................T--TGTGTGTGTATTTG-GTGGA--C--................................................................................................................................................................................................2111.0010000001000
..........................................................................................................................................................................................................................................................................................................................................GTCAGCCA-A-CGAG---------------ATGGG--------CT......................................................................2011.0010100000000
.........................................................................................................ACAGGTAAGTGGCG---ACTCT-G............................................................................................................................................................................................................................................................................................................................2011.0010100000000
......................................................................................................................................................TT--CCGTTGGTCTAATATGGCA................................................................................................................................................................................................................................................................................2111.0010010000000
droPer2
AAG--------------------T--TAGT------------------------TT---TGCT---AGACACTCGAATACACGGC-AGC-GTTGATT------TCAAAGGTAAGTGGCG---AGTCT-GCAAA--------T------AATT--CCGTTGGTCTAATATGGCAGATTTCGTTTTGCATT--------C-------------------C-----CAT--TGTGTGTGTATTTG-GTGGA--C--TTCTCTGGCCTTTC-CGC------------------TTTTGTTAAGTAATCAGCG--ATAAT-T--AATTTTT---CGTCAGCCA-A-CGAG---------------ATGGG--------CTACGAAAATTG----------CATTT--TAC---------ACATT-CTTTTGTAAAATCGATTGA--ACTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
AAG--------------------T--TAGT------------------------TT---TGCT---AGAC.......................................................................................................................................................................................................................................................................................................................................................................................1813.003300000
..............................................................T---AGACACTCGAATACACGGC-AGC-GTTG...............................................................................................................................................................................................................................................................................................................................................................2712.002200000
.......................................................................CTCGAATACACGGC-AGC-GTTGATT------......................................................................................................................................................................................................................................................................................................................................................2411.001010000
...........................................................TGCT---AGACACTCGAATACACGGC-AGC-GT.................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.AG--------------------T--TAGT------------------------TT---TGCT---AGACACTCGA.................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.............................................................CT---AGACACTCGAATACACGGC-AGC-GTT................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..................................................................AGACACTCGAATACACGGC-AGC-GTT................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..................................................................AGACACTCGAATACACGGC-AGC-GT.................................................................................................................................................................................................................................................................................................................................................................2411.001001000
.............................................................CT---AGACACTCGAATACACGG.........................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..........................................................................GAATACACGGC-AGC-GTTGATT------......................................................................................................................................................................................................................................................................................................................................................2111.001001000
......................................................TT---TGCT---AGACACTCGAATACACGGC-AGC-...................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.....................................................................................................................................................................................................C-------------------C-----CAT--TGTGTGTGTATTTG-GT........................................................................................................................................................................................................2111.001010000
..G--------------------T--TAGT------------------------TT---TGCT---AGACACTC...................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
............................................................GCT---AGACACTCGAATACACGGC-AGC-GTTG...............................................................................................................................................................................................................................................................................................................................................................2911.001100000
............................................................GCT---AGACACTCGAATACACGGC-AGC-...................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..............................................................T---AGACACTCGAATACACGGC-AGC-...................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..............................................................T---AGACACTCGAATACACGGC-AGC-GTT................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.................................................................................................................................................................................................................................T--TGTGTGTGTATTTG-GTGGA--...................................................................................................................................................................................................2011.001000010
............................................................GCT---AGACACTCGAATACACGGC-AGC-GTT................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.....................................................................................................................................................................................................................................GTGTGTGTATTTG-GTGGA--C--T...............................................................................................................................................................................................2011.001000010
................................................................................................................................................................GTCTAATATGGCAGATTTCGTT.......................................................................................................................................................................................................................................................................2211.001010000
....................................................................................................................................................................AATATGGCAGATTTCGTTTTG....................................................................................................................................................................................................................................................................2111.001000001
droWil2
AAATATTAAAGGCGCTGCTATAGTTTCATT------------------------TT---TGTC---CGACACA------CGTAAT-ACAC-----------A-ACAAAGGTAAGTCAGGGT---------AA--------TTAATT--GATTTTCCG-----C--TTTTTGCAGATTTCGTTTTGCACGCTTATTACG--AG-CGT--A-------------TGTGTGTGTGCATGTATGTG-GTGGA--TAGTT------TTTTTG-GGCTACCT-------------TTTTGTTAAGTAATCAGAGCTATAGT-T--AATTTAT---TTTCC---AAG--------------------AT-------------------GAAA---AATCTAAAATTC--CTG-------C-CCCGTAAATTTGTAAAATCAATGGA--AATCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................CATT------------------------TT---TGTC---CGACACA------CGT...........................................................................................................................................................................................................................................................................................................................................................................2015.00540010
...................ATAGTTTCATT------------------------TT---TGTC---CGACA......................................................................................................................................................................................................................................................................................................................................................................................2212.00200020
....ATTAAAGGCGCTGCTATAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200110
....................................................................................................................................................................................................CG--AG-CGT--A-------------TGTGTGTGTGC....................................................................................................................................................................................................................1911.00100001
..................................................................................................................................................................................................TACG--AG-CGT--A-------------TGTGTGTGTGC....................................................................................................................................................................................................................2111.00101000
..................................................................................................................................................................................................TACG--AG-CGT--A-------------TGTGTGTGTG.....................................................................................................................................................................................................................2011.00100001
..............................................................................................................TAAGTCAGGGT---------AA--------TTAATT--G........................................................................................................................................................................................................................................................................................................2011.00101000
............................TT------------------------TT---TGTC---CGACACA------CGTAAT-ACA....................................................................................................................................................................................................................................................................................................................................................................2411.00101000
.........................................................................................................................................................................................................................................................................TG-GGCTACCT-------------TTTTGTTAAGT.................................................................................................................................................2111.00100001
.....................................................................................................................................................................TTTTTGCAGATTTCGTTTTGC...................................................................................................................................................................................................................................................................2111.00101000
............................................................................................................................................................................................................................................................................................................AATCAGAGCTATAGT-T--AATTT.........................................................................................................................2111.00100100
....................................................................................................................................................................................................................................................................................................TGTTAAGTAATCAGAGCTATAGT-.................................................................................................................................2311.00100100
............................................................................................................................................................G-----C--TTTTTGCAGATTTCGTTTTGCACG................................................................................................................................................................................................................................................................2611.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................CTAAAATTC--CTG-------C-CCCGTAA........................2011.00101000
...............................................................................................................AAGTCAGGGT---------AA--------TTAATT--GAT......................................................................................................................................................................................................................................................................................................2111.00100100
.....................AGTTTCATT------------------------TT---TGTC---CGACACA------CGT...........................................................................................................................................................................................................................................................................................................................................................................2511.00110000
..................................................................CGACACA------CGTAAT-ACAC-----------A-AC....................................................................................................................................................................................................................................................................................................................................................2011.00100010
....ATTAAAGGCGCTGCTATAGTTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
......TAAAGGCGCTGCTATAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
.............................................................................................................GTAAGTCAGGGT---------AA--------TTAATT--GATTTT...................................................................................................................................................................................................................................................................................................2611.00100010
..................TATAGTTTCATT------------------------TT---TGTC---CGACA......................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.AATATTAAAGGCGCTGCTATAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
......TAAAGGCGCTGCTATAGTTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
.......................TTTCATT------------------------TT---TGTC---CGACACA------CGTA..........................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.........................TCATT------------------------TT---TGTC---CGACACA------CGT...........................................................................................................................................................................................................................................................................................................................................................................2111.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................AATTC--CTG-------C-CCCGTAAATTT....................2011.00101000
..............CTGCTATAGTTTCATT------------------------TT---TGTC---...........................................................................................................................................................................................................................................................................................................................................................................................2211.00100001
...............TGCTATAGTTTCATT------------------------TT---TGTC---...........................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..............................................................................................................................................................................................................................................TGTG-GTGGA--TAGTT------TTTTTG-G................................................................................................................................................................................2111.00100001
droVir3
AAA--------------------A--CGGTATACATATATATATATATATAACTAT---TAGAAC-AAATACTCGAATACTCGGCGAACTACTGCA-----A-TAAAAGGTGAGAGCAA----CTAA-GCAA----TGAACTAATTAT---TT-CCG--------------CA----------GGCATT--------T-------------------A-----CAT--TGTGTGTGTATTTG-GTAC------TA------CATTTT-TGCCCACT-------------CTTTGTTAAGTAATCATAG--GTAAT-TGTAATTTTT---CCCTACGCA-A-GCAG---------------TTGGTGAACTTTGGTGCG-TCGATG----------CACTG-CTGC---------AC----ATTTTGCAAAATCGATTCA--AGCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................CGGCGAACTACTGCA-----A-TAAAAGT...............................................................................................................................................................................................................................................................................................................................................2312.002001000000000000000000000000000000001000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TGGTGAACTTTGGTGCG-TCGA..............................................................2112.002000000000000000000000100000010000000000000000000000000000000000
...................................................................AATACTCGAATACTCGGCGAA.....................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000000010000001000000000000000000000000000
......................................................................ACTCGAATACTCGGCGAACT...................................................................................................................................................................................................................................................................................................................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
.........................................................................CGAATACTCGGCGAACTACTGCA-----A-T.....................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
............................................................................ATACTCGGCGAACTACTGCA-----........................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
..........................................................................GAATACTCGGCGAACTACTGC..............................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.....................................TATATATATATATAACTAT---TAGAAC-AAATAC.....................................................................................................................................................................................................................................................................................................................................................................................3111.001000000000000000000000000000000000000000000000010000000000000000
........................................................................................................................................................................................................................................................................................................................................................G---------------TTGGTGAACTTTGGTGCG-TC................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................A----CTAA-GCAA----TGAACTAATTA..........................................................................................................................................................................................................................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
............................................................................ATACTCGGCGAACTACTGCA-----A-TA....................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
............................................................................ATACTCGGCGAACTACTGC..............................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
................................................................C-AAATACTCGAATACTCGGCGAACTAC.................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................AAAAGGTGAGAGCAA----CTAA-GC...........................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................TGAACTTTGGTGCG-TCGATG----------C.................................................2111.001000000000000000000000000000000000010000000000000000000000000000
..............................................................................................CA-----A-TAAAAGGTGAGAGCAA----CT................................................................................................................................................................................................................................................................................................................................2111.001000001000000000000000000000000000000000000000000000000000000000
................................................................C-AAATACTCGAATACTCGGCG.......................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................ACTAATTAT---TT-CCG--------------CA----------GGCAT.................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................TGCA-----A-TAAAAGGTGAGAGCA.......................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...................................................................AATACTCGAATACTCGGCGAACTACT................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000010000000000000000000000000
....................................................CTAT---TAGAAC-AAATACTCGAA................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TGGTGCG-TCGATG----------CACTG-............................................1811.001100000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TTTGTTAAGTAATCATAG--GTA....................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...................................TATATATATATATATAACTAT---TAGAAC-AAATAC.....................................................................................................................................................................................................................................................................................................................................................................................3311.001000000000000000000000000000000000000000010000000000000000000000
..............................................................AAC-AAATACTCGAATACTCGGC........................................................................................................................................................................................................................................................................................................................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TGCG-TCGATG----------CACTG-CTGC---------AC----.........................2111.001000000000000000000000000000001000000000000000000000000000000000
.....................................................................TACTCGAATACTCGGCGAACTACTGC..............................................................................................................................................................................................................................................................................................................................................................2611.001010000000000000000000000000000000000000000000000000000000000000
.............................................................................TACTCGGCGAACTACTGCA-----A-T.....................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
..................................................AACTAT---TAGAAC-AAATACTCGA.................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
....................................................................ATACTCGAATACTCGGCG.......................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000010000000000000000000000000000000000
......................................................AT---TAGAAC-AAATACTCGAA................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
................................................ATAACTAT---TAGAAC-AAATACT....................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000010000
....................................................................................................................................................................................................................................................................................................................................TT---CCCTACGCA-A-GCAG---------------TTGGT................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................C-AAATACTCGAATACTCGGCGAACTACTG...............................................................................................................................................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
.............................................................GAAC-AAATACTCGAATACTCGGCGA......................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000010000000000000000000000000000000000000000000000000
...............................................................................................A-----A-TAAAAGGTGAGAGCAA----CTA...............................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.....................................................TAT---TAGAAC-AAATACTCGA.................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
........................................................................................................................................TGAACTAATTAT---TT-CCG--------------CA----------GG....................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................................AAATACTCGAATACTCGGCGAACTACC................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................TACTCGGCGAACTACTGCA-----A-TAAAAGT...............................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000100000000000000000000000000
..........................................ATATATATAACTAT---TAGAAC-AAAT.......................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................GGTGCG-TCGATG----------CACTG-CTGC---------...............................2111.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................CGCA-A-GCAG---------------TTGGTGAACTTT.........................................................................2111.001000000000000000000000000000000000010000000000000000000000000000
...................................................................AATACTCGAATACTCGGC........................................................................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................T-------------------A-----CAT--TGTGTGTGTATTTG-GT........................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
......................................................................ACTCGAATACTCGGCGAACTACT................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................AT--TGTGTGTGTATTTG-GTAC------T...............................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................AAAGGTGAGAGCAA----CTAA-GC...........................................................................................................................................................................................................................................................................................................................2011.001000001000000000000000000000000000000000000000000000000000000000
.......................................................................CTCGAATACTCGGCGAACT...................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000010000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AACTTTGGTGCG-TCGATG----------CA................................................2011.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................CA-A-GCAG---------------TTGGTGAACTTTGG.......................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
GCA--------------------T--TTTCA-----------------------TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGTGTGTGTATTTG-ATGAT--TA----------GTTTT-TGCCCAGT-------------CTTTGTTAAGTAATCATAG--GGAATATATAATTTTT---ATATTT----------------GCGTCGTAGTT--------------AG-TAATTG----------CACTATGT-TACGCCTGATGCACT-ATTTTGCAAAATCGATTCA--AGTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................AATTG----------CACTATGT-TACGCCTG.................................2111.001100000
................................................................................................................................................................................................................................................................................................................................................................................................G----------CACTATGT-TACGCCTGATG..............................2011.001100000
droGri2
AAG--------------------T--GTACATATATACATATATATATATAGTTAT---TTCAAT-AGACACTA--ATAACCTCG-AACTTCTGCTA------TCAAAGGTGAGACCAA----TTACAGAAAATAATTG-------------A-CTA----ACAAATTTCCCGCAGGCATTTTTGCATT--------GT------------------------G--TGTGTGTGTGTCTTTA-GTACC--TA-----------TTTT-TGCTCGACT------------CTTTGTTAAGTAATCAAGT--ATAAT-T--AATTTTT---TTTTT-CCA-A-GTAGTTCGATGCATCATA--------------GTGCG-TCATTA----------GACTG-GT-T---------AC----ACTTTGCAAAATCGATTGA--GTTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
AAG--------------------T--CC--A-----------------------TTTAGTCCTAT-AAACA--------CACGAC-ACCAATTCTAGACGCAGAAAAAGGTAAAAA---------------------------------------------ATAGATTTTGCACATTTCGCCTTGT-----CGCTACGAAAA-AAA--A---AATTCCC----GTGTCTGTGTGTGTATGAGTGTACA--CACTT------CCTTTT-CCCCCATTTTTTTCAT-CTCATCTCGTTAAGTAATCGCCG--ATAAT-T--GTTAATTCTATGCCA-----G----------------------------------------ACACAATTTTCCTACGAATT----G---------A-----CGTTTGTAAAATCGATGGA--ATCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................GAC-ACCAATTCTAGACGCAG......................................................................................................................................................................................................................................................................................................................................................2012.002020000
.................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCCTACGAATT----G---------A-----CGTT.....................2112.002200000
.................................................................................CGAC-ACCAATTCTAGACGCAG......................................................................................................................................................................................................................................................................................................................................................2112.002100100
.................................................................................................................................................................................................................................GTCTGTGTGTGTATGAGTGT........................................................................................................................................................................................................2011.001010000
...................................................................AACA--------CACGAC-ACCAATTCTAGACGCAG......................................................................................................................................................................................................................................................................................................................................................2711.001010000
..................................................................................GAC-ACCAATTCTAGACGCA.......................................................................................................................................................................................................................................................................................................................................................1911.001001000
.................................................................................CGAC-ACCAATTCTAGACGCA.......................................................................................................................................................................................................................................................................................................................................................2011.001001000
...................................................................AACA--------CACGAC-ACCAATTCTAGACGCAGA.....................................................................................................................................................................................................................................................................................................................................................2811.001100000
................................................................T-AAACA--------CACGAC-ACCAATTCTAGACGCA.......................................................................................................................................................................................................................................................................................................................................................2811.001010000
.......................................................................................CCAATTCTAGACGCAGAAA...................................................................................................................................................................................................................................................................................................................................................1911.001100000
.............................................................................................................................................................................CATTTCGCCTTGT-----CGCTACGA......................................................................................................................................................................................................................................................2111.001100000
..............................A-----------------------TTTAGTCCTAT-AAACA--------CAC...........................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.............................................................CTAT-AAACA--------CACGAC-ACCAATTC...............................................................................................................................................................................................................................................................................................................................................................2311.001010000
....................................................................................C-ACCAATTCTAGACGCAC......................................................................................................................................................................................................................................................................................................................................................1811.001010000
droBip1
AGC--------------------T--GCAAA-----------------------TTT-TTCATTCAA---AACA-----CACAAC-ACCAACTTGAG------ACGCAGATAAAAGGTA-------A--------------------AG-----AAA----AAAAATTTTGCACATTTCGCCTTGT-----CGCTACGAGAA-AAT--T-------CCC----GTGTCTGTGTGTGTATGCGTGAACA--CACTT------CCTTTT-CCCCT--TTTTTCCAT-CTCTTCTCATTAAGTAATCGCCG--ATAAT-T--GTTAATTCA---ACG--C--GACA-------------------------------------AGATT---TTCCAACAAAGT--TT----------------CCCTTGTAAAATCGATGGA--ATTGSizeHit CountTotal NormTotal
No Reads
droKik1
ATA--------------------T--CCGTT-----------------------AT---TTCTTT-AGGCA--------CACAAC-ACGA-----------G-GAAGAGGTAAGAGGCA------------T----TCGGAT-------ATTT-TCA----AGTGATTTTGCACATTTCGCTTCCCATT-----TTCGTGAG-AGT--G-------------TATGCATGTGTGTGTATTTG-GTAGA--CACTT------CCTTTT-TCCTCTGTTCT--TT------TTTCGTTAAGTAATCAACG--ATAAT-T--GTTTTTTTT----GT-----G----------------------------------------TGATG---CGCTTTTGGTTT--TTG---------G-----GTTTTGTAAAATCGATGGC--CCTCSizeHit CountTotal NormTotal
No Reads
droFic1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGTACTTG-GTAGA--CACTT------CCTTTT-CACCAGGTTCT----T-TTC-CGCCGTTAAGTAATCGGCC--ATGGT-T--GCTTTCTGC----GA-----A----------------------------------------GGTTT---TATTTTCCATTT--TCG---------GTGTTAGTTTTGCAAAATCGATGGC--CCTCSizeHit CountTotal NormTotal
No Reads
droEle1
AAG--------------------T--GCCCAT----------------------TT---TGCTTT-AGACACTA-----CACGTT-ACGC-----------G-GAAAAGGTGAGTTACG------------G----TGGGTTAACTATAATT--CCA----CCTGATTTTGCCCATTTCGCTTTGAATT--------GGGCA-AATGTG-------------TGAGTGTGCGTGTGCACTTG-GTAGA--CACTT------CCTTTT-CGCTTGATTCT--CTT-TTT-TCCCGTTAAGTAATCAGCG--ATAAT-T--GATTTCGGC----CA-----A----------------------------------------AGATT---TCGCTTCGATTT--TTG---------GCCATAGTTTTGCAAAATCGATGG-------SizeHit CountTotal NormTotal
No Reads
droRho1
AAG--------------------T--GCCTA-----------------------TT---TGCTTT-AGACTCGA-----CACGAC-ACGA-----------A-GGAAAGGTGAGTTTCG------------G----TGGGCTAATTATAATT--CCA----CCTGATTTTGCACATTTCGCATTGCATT--------GTGGG-AATGTG-------------TGAGTGTACGTGTGTACTTG-GTAGA--CACTT------CCTTTT-CGCTTGATTC--TCAT-TTT-TCCCGTTAAGTAATCAGCG--ATAAT-T--GTTTTCTAT----AC-----G----------------------------------------AGTTT---TCGCTTCGATTT--TTG---------GCTTTGGTTTTGCAAAATCGATGGC----TCSizeHit CountTotal NormTotal
No Reads
droBia1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTGTGCACTTG-GTAGACACACTT------TCCT-T-CGCTGCGTTCT--TTT-CCC-CACCGTTAAGTAATCAGCG--AGG-C-T--GGTTTTCGC----CA-----G----------------------------------------GGATC---TGCCCTTGGTTC--TTG---------GCCCTAGACTTGCAAAATCGATGGC--CCCGSizeHit CountTotal NormTotal
No Reads
droTak1
AAG--------------------T--CTCCA-----------------------TT---TGCTTT-AGACACGA-----TACGAC-ACGA-----------G-GAAAAGGTGAGTGGCG-CTG---CG---G----TGGCTTAATTTCGATTT-CCA----CCTGATTTTGCACATTTCGCTTCGCATT--------GTGCG-AATGAGTGAGGCTGTTGTGTGCGTGTGTGTGTGTACTTG-GTAGACACACTT------CCTTTT-CGCTTGATTCT--TTTTCTT-TACCGTTAAGTAATCAGCG--ATAAT-T--GTTTTTCGC----CA-----G----------------------------------------AGAAT---TCCCTTCGATT---TTG---------GCCTTAGATTTGCAAAATCGATGGC--TCTCSizeHit CountTotal NormTotal
No Reads
droEug1
AAG-------------------GT--TCCAA-----------------------TT---TAATTC-AGACACGA-----CAAAAC-ACAA-----------ATAAAAAGGTAAGTTCCACT-T---CA---T----AGGGTTAGTT------T-CCA-------CATTTTGCACATTTCTTTTCCCATT--------GTGAA-TATGAG-------------TGTGTTTGTGTGTGTACTTG-GTAGA--CACTT------CATTTC-GCTTTGATTTT------CTT-TACCGTTAAGTAATCAGCG--GTAAT-T--GTTTTTTGC----TA-----G----------------------------------------ACATT---CCTCTTACATTT--TTG---------ACCATAGTTTTGCAAAATCGATGG-------SizeHit CountTotal NormTotal
No Reads
dm3
AAG--------------------T--TACTA-----------------------TT---TGCTTT-AGGCACGA-----CACGAC-ACGA-----------A--AAAAGGTGAGCTGGGGCGG---CT---C----TGGGCTAATTAAGATTA-CCA----CCTGATTTTGCACATTTCGTCTCGCATT--------GTGCGGTTT--G-------------CCAATGTGTGTGTCTACTTG-GTAGA--CACTT------CCTTTG-CGCTTGGTTTTCTCAT-CTC-TGTCGTTAAGTAATCATCG--ATAAT-T--GTTTTTTGT----CA-----G----------------------------------------AGAAT--TTGCCTTCGATTT--TTG---------GCATTAGATTTGCAAAATCGATGGCCATCTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................T---TGCTTT-AGGCACGA-----CACGAC-AC.....................................................................................................................................................................................................................................................................................................................................................................23111.001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TA-----------------------TT---TGCTTT-AGGCACGA-----CACGAC-A......................................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................T---TGCTTT-AGGCACGA-----CACGAC-.......................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000002000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TTTTTGT----CA-----G----------------------------------------AGAAT--TTGCCT....................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000
........................................................................................................................................................................................................................................................................................................................................................................................................TTCGATTT--TTG---------GCATTAGATTT....................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TTT-AGGCACGA-----CACGAC-ACGA-----------A--AA...................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................A-----------------------TT---TGCTTT-AGGCACGA-----CACG..........................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................AT-CTC-TGTCGTTAAGTAATC.............................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TTCGTCTCGCATT--------GTGCGGTT................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010
......................................................TT---TGCTTT-AGGCACGA-----CACGA.........................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................ATTTCGTCTCGCATT--------GTGCGG..................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TT---TGCTTT-AGGCACGA-----CACGAC-ACGA-----------A--.....................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TACTA-----------------------TT---TGCTTT-AGGCACGA-----CACGA.........................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................CTTG-GTAGA--CACTT------CCTTTG-CG...............................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TGCTTT-AGGCACGA-----CACGAC-A......................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TT--------GTGCGGTTT--G-------------CCAATGTG.......................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................CGA-----CACGAC-ACGA-----------A--AAAAG................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TTTCGTCTCGCATT--------GTGCGGT.................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000000000000000000000000000000
.......................T--TACTA-----------------------TT---TGCTTT-AGGCACGA-----CAC...........................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................A-----------------------TT---TGCTTT-AGGCACGA-----CACGAC-.......................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CTAATTAAGATTA-CCA----CCTGATT.....................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................AGAAT--TTGCCTTCGATTT--...........................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TTT-AGGCACGA-----CACGAC-ACGA-----------........................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............................................................TTT-AGGCACGA-----CACGAC-ACGA-----------A--AAAAG................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................CGA-----CACGAC-ACGA-----------A--AAAAGTAA.............................................................................................................................................................................................................................................................................................................................................2221.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AT-T--GTTTTTTGT----CA-----G----------------------------------------AGAAT--T.........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................TGT----CA-----G----------------------------------------AGAAT--TTGCCTTCGA................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.............................................................................................................................................................................................................................................ACTTG-GTAGA--CACTT------CCTTTG-CGCTTG...........................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................ACTT------CCTTTG-CGCTTGGTT........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................CCTTTG-CGCTTGGTTTTCTCAT-CTC-TG..........................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
......................................................................................................................................................................................................................................................................................TCTCAT-CTC-TGTCGTTAAGT.................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................C----TGGGCTAATTAAGATTA-CCA----............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................CTTCGATTT--TTG---------GCATTAGATT.....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................GGTTT--G-------------CCAATGTGTGTG...................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................CTTT-AGGCACGA-----CACGAC-ACGA-----------A--A....................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................G-GTAGA--CACTT------CCTTTG-CGCT.............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.......................................................T---TGCTTT-AGGCACGA-----CACGAC-ACG....................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................AAT-T--GTTTTTTGT----CA-----G----------------------------------------AGAAT--..........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................GCACGA-----CACGAC-ACGA-----------A--AAAAA................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CTCGCATT--------GTGCGGTTT--G-------------CCAA...........................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TGTGTCTACTTG-GTAGA--CAC................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TACTA-----------------------TT---TGCTTT-AGGCACGA-----CACG..........................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................GAC-ACGA-----------A--AAAAGGTGAT...........................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................ATTA-CCA----CCTGATTTTGCACA..............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TT------CCTTTG-CGCTTGGTTT.......................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
..............................A-----------------------TT---TGCTTT-AGGCACGA-----CAC...........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TTT-AGGCACGA-----CACGAC-A......................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................ATT--------GTGCGGTTT--G-------------CCAATGTGTGTGT..................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TGCGGTTT--G-------------CCAATGTGTGTGTC.................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CTACTTG-GTAGA--CACTT------CCT.....................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................GCTTT-AGGCACGA-----CACGAC-ACGA-----------A--.....................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................CGA-----CACGAC-ACGA-----------A--AAAAGT...............................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................AGA--CACTT------CCTTTG-CGCTTGG..........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................T---TGCTTT-AGGCACGA-----CACGAC-ACGA-----------A--.....................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................GCGGTTT--G-------------CCAATGTGTGTGTC.................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................CTTCGATTT--TTG---------GCATTAGAT......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................AGGCACGA-----CACGAC-ACGA-----------A--AA...................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ACTA-----------------------TT---TGCTTT-AGGCACGA-----CACG..........................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................T---TGCTTT-AGGCACGA-----CACGAC-ACGA-----------A--AT...................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TGCTTT-AGGCACGA-----CACGAC-.......................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................TTTCTCAT-CTC-TGTCGTTAAG..................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TC-TGTCGTTAAGTAATCA............................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................TCAT-CTC-TGTCGTTAAGTAATC.............................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................GA--CACTT------CCTTTG-CGCTTGGT.........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................ATT--------GTGCGGTTT--G-------------CCAAT..........................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAATCGATGGCCATCTA2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................ATAAT-T--GTTTTTTGT----CA-----G----------------------------------------AG...............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GTAATCATCG--ATAAT-T--GTTTT.........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................AT-CTC-TGTCGTTAAGTAATCATC..........................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................CTCAT-CTC-TGTCGTTAAGTAATCA............................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................CA----CCTGATTTTGCACATTTCGT........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................AATGTGTGTGTCTACTTG-G.........................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................GTGCGGTTT--G-------------CCAATGTGTGT....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................TTG-GTAGA--CACTT------CCTTTG-CGC..............................................................................................................................................................................2211.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TACTTG-GTAGA--CACTT------CCTTTG-.................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
............................................................................................................................................................................................................................................................................................................................................CA-----G----------------------------------------AGAAT--TTGCCTTCGATTT--...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.................................................................................CGAC-ACGA-----------A--AAAAGGTGAGC..........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................T---TGCTTT-AGGCACGA-----CACGAC-A......................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............................................................TT-AGGCACGA-----CACGAC-ACGA-----------A--AAA..................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TT---TGCTTT-AGGCACGA-----CACGAC-AC.....................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CTA-----------------------TT---TGCTTT-AGGCACGA-----CA............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................ATAAT-T--GTTTTTTGT----CA-----G----------------------------------------AGAAT--..........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CGATTT--TTG---------GCATTAGAT......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
............................................................GCTTT-AGGCACGA-----CACGAC-.......................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................GCGGTTT--G-------------CCAATGTGTGTGT..................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................TTCGATTT--TTG---------GCATTAGATT.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TT---TGCTTT-AGGCACGA-----CACGAC-A......................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................TAGA--CACTT------CCTTTG-CGCTT............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AG--------------------T--TACTA-----------------------TT---TGCTTT-AGGCA......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..G--------------------T--TACTA-----------------------TT---TGCTTT-AGGC.......................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TT-AGGCACGA-----CACGAC-ACGA-----------........................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...................................................................................................................................................................TGATTTTGCACATTTCGC........................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AAG--------------------T--TACCA-----------------------TT---TGCTTT-AGGCACGA-----CACGAC-ACGA-----------A--AAAAGGTGAGCTGGGGCGG---CG---C----TGGGCTAATTAAGATTA-CCA----CCTGATTTTGCACATTTCGCCTCGCATT--------GTGCG-ATT--G-------------CCAATGTGTGTGTCTACTTG-GTAGA--CACTT------CCTTTG-CGCTTGGTTTTCTCAT-CTC-TACCGTTAAGTAATCAGCG--ATAAT-T--GTTTTTTGC----CA-----G----------------------------------------AGAAT---CGCCTTCGATTT--TTG---------GCATTAGTTTTGCAAAATCGATGG-------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................TTCGATTT--TTG---------GCATTAGTTT.....................2111.00100000000000001000
..............................................................................................................................................AATTAAGATTA-CCA----CCTG........................................................................................................................................................................................................................................................................................1811.00100100000000000000
.....................................................................................................................................................................................................................................................AGA--CACTT------CCTTTG-CGCTTGG..........................................................................................................................................................................2111.00100000000010000000
..............................................................................................................TGAGCTGGGGCGG---CG---C----TGGGC................................................................................................................................................................................................................................................................................................................2111.00100000000000010000
......................................................................................ACGA-----------A--AAAAGGTGAGCTGGGGG....................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
...............................................................TT-AGGCACGA-----CACGAC-ACGA-----------A--AAAAGT...............................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
.......................................................................................................................................................................................................................................................................................................TAAGTAATCAGCG--ATAAT-T--GC............................................................................................................................2111.00110000000000000000
..........................TACCA-----------------------TT---TGCTTT-AGGCACGA-----CAC...........................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
.....................................................................................................................................................................................................GTGCG-ATT--G-------------CCAATGTGT......................................................................................................................................................................................................................1811.00100000000001000000
.........................................................................................A-----------A--AAAAGGTGAGCTGGGG.....................................................................................................................................................................................................................................................................................................................................1820.50100000010000000000
droSec2
AAG--------------------T--TACCA-----------------------TT---TGCTTT-AGGCACGA-----CACGAC-ACGA-----------A--AAAAGGTGAGCTGGGGCGG---CG---C----GGGGCTAATTAAGATTA-CCA----CCTGATTTTGCACATTTCGCCTCGCATT--------GTGCG-ATT--G-------------CCAATGTGTGTGTCTACTTG-GTAGA--CACTT------CCTTTG-CGCTTGGTTTTCTCAT-CTC-TACCGTTAAGTAATCAGCG--ATAAT-T--GTTTTTTGC----CA-----G----------------------------------------AGAAT---CGCCTTCGATTT--TTG---------GCATTAGTTTTGCAAAATCGATGG-------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................TGCTTT-AGGCACGA-----CACGAC-A......................................................................................................................................................................................................................................................................................................................................................................2112.0021001
.....................................................................................................................................................................................................GTGCG-ATT--G-------------CCAATGTGTGTGT..................................................................................................................................................................................................................2212.0020011
................................................................................ACGAC-ACGA-----------A--AAAAGGTGAGCTGGGG.....................................................................................................................................................................................................................................................................................................................................2611.0010100
..........................TACCA-----------------------TT---TGCTTT-AGGCACGA-----CAC...........................................................................................................................................................................................................................................................................................................................................................................2411.0011000
..............................A-----------------------TT---TGCTTT-AGGCACGA-----CACGAC-ACG....................................................................................................................................................................................................................................................................................................................................................................2611.0011000
...........................................................TGCTTT-AGGCACGA-----CACGA.........................................................................................................................................................................................................................................................................................................................................................................1911.0011000
.........................................................................................................................................................................................CATT--------GTGCG-ATT--G-------------CCAATGTGTGTGT..................................................................................................................................................................................................................2611.0010010
.......................................................T---TGCTTT-AGGCACGA-----CACGAC-ACGA-----------........................................................................................................................................................................................................................................................................................................................................................2511.0011000
.................................................................................................................................................................................................................................................................................................................................TTTTTGC----CA-----G----------------------------------------AGAAT---CGCCTT...................................................2111.0010100
..............................A-----------------------TT---TGCTTT-AGGCACGA-----CACG..........................................................................................................................................................................................................................................................................................................................................................................2111.0011000
....................................................................................................................................................................................................................................................................................TTTCTCAT-CTC-TACCGTTAA...................................................................................................................................................2011.0010010
.......................................................................................................................................................................................................................................................................................................TAAGTAATCAGCG--ATAAT-T--G.............................................................................................................................2011.0011000
droYak3
AAG--------------------T--TACCA-----------------------TT---CGCTTT-AGGTACGA-----CACGAC-ACGA-----------A-GAAAAGGTAAGCTGCGGTTT---TG---C----TGGGCTAATTAAAATTA-CCA----CCTGATTTTGCACATTTCGCTTCGCATT--------GTGCG-TTT--G-------------CCAATGTGTGTGTCTACTTG-GTAGA--CACTT------CCTTTTGCGCTTGGTTTCCTCAT-CTC-TACCGTTAAGTAATCAGCG--ATAAT-A--GTTT-TTGC----CG-----G----------------------------------------AGATT---CGCCTTCGATTT--TTG---------GCATTAGTTTTGCAAAATCGATGG-------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................TT-AGGTACGA-----CACGAC-ACGA-----------A-GAAAAG................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
...............................................................TT-AGGTACGA-----CACGAC-ACGA-----------........................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.............................................................................................................GTAAGCTGCGGTTT---TG---C----TGGGCT...............................................................................................................................................................................................................................................................................................................2311.00100100000000
AAG--------------------T--TACCA-----------------------TT---CGCTTT-AGGTAC.....................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
...............................................................TT-AGGTACGA-----CACGAC-ACGA-----------A-GA....................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.............................................................................................................................................................................................................................................................................................CTC-TACCGTTAAGTAATCAGC..........................................................................................................................................2111.00101000000000
.............................................................................................................GTAAGCTGCGGTTT---TG---C----TG...................................................................................................................................................................................................................................................................................................................1911.00100000010000
................................................................................................................................................................................................................................AATGTGTGTGTCTACTTG-G.........................................................................................................................................................................................................1911.00101000000000
..........................................................................................................................................................................................ATT--------GTGCG-TTT--G-------------CCAATGTGTGTGTCT................................................................................................................................................................................................................2711.00101000000000
droEre2
AAG--------------------T--TACAA-----------------------TT---CGCTTT-AGGCACGA-----CACGAC-ACGA-----------G-GAAAAGGTAAGCTGCAGTGC---CG---C----TGGGCTAATTAAAATTA-CCA----CCTGATTTTGCACATTTCGCATCGCATT--------G--AG-TTT--G-------------CCAATGTGTGTGTCTACTTG-GTAGA--CACTT------CCTTTG-CGCTTGCTTTTCTCAT-CTC-TACCGTTAAGTAATCAGCG--ATAAT-T--GTTTTTTGC----CA-----G----------------------------------------AGATT---TGCCTTCGATTT--TTG---------GCATTAGTTTTGCAAAATCGATGG-------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..G--------------------T--TACAA-----------------------TT---CGCTTT-AGGCACGA-----..............................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
...................................................................................................................................................................................................................................................GTAGA--CACTT------CCTTTG-CGCTT............................................................................................................................................................................2111.0010000010
...........................................................CGCTTT-AGGCACGA-----CACGAC-ACGA-----------G-GAA...................................................................................................................................................................................................................................................................................................................................................2811.0011000000
.......................................................................................................................................................................................................................................................................TTTG-CGCTTGCTTTTCTCAT-C...............................................................................................................................................................2111.0010000010
.......................T--TACAA-----------------------TT---CGCTTT-AGGCACG....................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.AG--------------------T--TACAA-----------------------TT---CGCTTT-AGGCACGA-----CACG..........................................................................................................................................................................................................................................................................................................................................................................2811.0011000000

Generated: 05/17/2015 at 10:25 PM