ID:

dps_433

 Coordinate:

2:8692630-8692882 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.8 -28.8 -28.6 -28.6

Flybase annnotation

five_prime_UTR [Dpse\GA11255-u5]; five_prime_UTR [Dpse\GA11255-u5]; exon [Dpse\GA11255:1]; exon [Dpse\GA11255:2]; intron [Dpse\GA11255-in]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTACGCCAAGTGTTTGCTTATAATTAGTGCAAGTGGATTGGAGCAAATACGTGAGTTTTTGTTCATACACATGTCTGGGGGTGCTCTACTCCAATAAATAGTTGCATGCAAAGTAATTCGGTCGAAACTGCAAGCTGTTATTAATGAAAATTGGTGGTTGGCTCTGCTGCCACTATCAAATGAAAGCGATAAGAATTGTGCAATTAATGAAAGTGTGCCACTGCAGTGTCGTGTGCCGTGCAGTGGTCCCAAGCCACTCGTTTTTACAAATACACATTTTTTATGCTGCCTTTATGCTTGCAGTCCCCCCCCCCCCTCTCGAGTGCAAGTGACCGCCACCGTCGTTCAAAGAG
********************************************************************************************************************....((((..(((((..(((.((((((((.....(((((((.((((......))))))))))).......................)))))))).)))........)))))..))...))********************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 M062
head
 SRR902011
testis
 SRR902012
CNS imaginal disc
 V112
male body		 GSM343916
embryo
....................................................................................................................TTCGGTCGAAACTGCAAGCTGT....................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0
................................GTGGATTGGAGCAAATAC............................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0
........................................................................................................................................................................................................................ACCACTGCAGTGTCGTGTGC..................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................................GCCACTGCAGTGTCGTGTGC..................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
......................ATTAGTGCAAGTGGATTGGAG...................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0
..........................................................................................................................................................................................................................CACTGCAGTGTCGTGTGCCGT.................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0
......................ATTAGTGCAAGTGGATTGGAGCA.................................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 1 0
..............................................ATACGTCAGTTTTTTTTCGTAC............................................................................................................................................................................................................................................................................................. 22 3 2 0.50 1 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................TTGCAGTACCCCCCCCCCTTCG.................................. 22 3 3 0.33 1 0 0 0 0 0 0 1
....................................................................................................................................................................................................................................................................................TTCTTTATGCTGCCTTTATGCT....................................................... 22 1 8 0.25 2 0 2 0 0 0 0 0
......................................................................................................................................................................................................................................................................................TTTTATGCTGCCATTAGCCTT...................................................... 21 3 6 0.17 1 1 0 0 0 0 0 0
...............................................................................................................................................................GGCTTTGCTGCCACGATCCA.............................................................................................................................................................................. 20 3 12 0.17 2 2 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................TTATGCTGCCTTTATGCT....................................................... 18 0 8 0.13 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................TTCTTTATGCTGCCTTTATGC........................................................ 21 1 8 0.13 1 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................TTTATGCTGCCTTTATGCC....................................................... 19 1 8 0.13 1 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................................................................TTTTATGCTGCCTTTATGCTG...................................................... 21 1 8 0.13 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................TTCTTTATGCTGCCTTTATGCTGTC.................................................... 25 3 11 0.09 1 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................TCGAGTGGTATTGACCGCC................ 19 3 18 0.06 1 0 0 0 0 0 0 1

Anti-sense strand reads

GATGCGGTTCACAAACGAATATTAATCACGTTCACCTAACCTCGTTTATGCACTCAAAAACAAGTATGTGTACAGACCCCCACGAGATGAGGTTATTTATCAACGTACGTTTCATTAAGCCAGCTTTGACGTTCGACAATAATTACTTTTAACCACCAACCGAGACGACGGTGATAGTTTACTTTCGCTATTCTTAACACGTTAATTACTTTCACACGGTGACGTCACAGCACACGGCACGTCACCAGGGTTCGGTGAGCAAAAATGTTTATGTGTAAAAAATACGACGGAAATACGAACGTCAGGGGGGGGGGGGAGAGCTCACGTTCACTGGCGGTGGCAGCAAGTTTCTC
*********************************************************************************************************************....((((..(((((..(((.((((((((.....(((((((.((((......))))))))))).......................)))))))).)))........)))))..))...))******************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 V112
male body
..................................................................................................................................................................................................................................ACAGCACACGGCACGTCACCAGGGTTCG................................................................................................... 28 0 1 2.00 2 0 2 0 0
...........................................................................................................................................................................................................................TGACGTCACAGCACACGGCAC................................................................................................................. 21 0 1 1.00 1 1 0 0 0
............................................................................CACCCACGAGATGAGGTTAT................................................................................................................................................................................................................................................................. 20 1 1 1.00 1 1 0 0 0
................................................................................................................................................................................................................................................................................GTGTAAAAAATACGACGGAGA............................................................ 21 1 1 1.00 1 1 0 0 0
.................................................................................................................................................................GAGACTACGGTGATATTT.............................................................................................................................................................................. 18 2 4 0.25 1 1 0 0 0
.........................................................................................................................................................................................................................................................................................................................................ACTGGCGCTGGCAGAAAG...... 18 2 4 0.25 1 1 0 0 0
...................................................................................................................................................................................................................................................................CAAACAGGTCTATGTGTAAAAAA....................................................................... 23 3 4 0.25 1 0 0 1 0
............................................................GAAGTATGTGTAGAAACCCC................................................................................................................................................................................................................................................................................. 20 3 9 0.11 1 1 0 0 0
.......................................................................................................................................................................................................................................................................................................................................TCGCGGGGGGTGGCAGCAA....... 19 3 10 0.10 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:8692580-8692932 + dps_433 CT-------ACGC-CAAGTGTT-----TGCT-----------TATAATTAG------TGCAAGTGGATTGGAGCA--AATACGTGAGTTTT--TGTTCATACACATGTCT----GGGGG--TG----C------TCTAC----TCCA-----A---------------TAAATAGT-TGCATGCAAAGTAAT------TCG-GTCGAAACTGCAAGCTGTTATT--AATGAAA------ATTGG-------TGGTTGGCTCTGCTG----------------CCACTATCAAATGAAAGCGATAAGAATTGTGCAATTAA----TGAAAGTGTGCCA--CTGC--------AG------TGTC-------------------------------------------GTGTGCCGTGCAGTGGTC-CCAAGCC-ACTCGTTTTTACAAA-----------------TACACATTTTTTATGCTGCCT-TTATGCTTGCAGTCCCCCCCC----------C------------------------------------------------------CCCTCTCGAGTGCAAGTGACCG---CCACCGTCGTTC-AAAGAG
droPer2 scaffold_0:2506020-2506384 + CT-------ACGC-CAAGTGTT-----TGCT-----------TATAATTAG------TGCAAGTGGATTGGAGCA--AATACGTGAGTTTT--TGTTCATACACATGTCT----GTGGG--TG----C------TCTAC----TCCA-----A---------------TAAATAGT-TGCATGCAAAGAAAT------TCG-GTCGAAACTGCAAGCTGTTATT--AATGAAA------ATTGG-------TGGTTGGCTCTGCTG----------------CCACTATCAAATGAAAGCGATAAGAATTGTGCAATTAA----TGAAAGTGTGCCA--CTGC--------AG------TGTC-------------------------------------------GTGTGCCGTGCAGTGGTC-CCAAGCC-ACTCGTTTTTACAAATACACACACTATGTATGTATATATTTTTTATGCTGCCT-TTATGTTTGCAGTCCCCCCC---------------------------------------------------------------------TCTCGAGTGCAAGTGACCG---CCACCGCCGTTC-AAAGAG
droVir3 scaffold_13047:8212911-8213263 + ---------ACGC-CAAGTGAG-----TGTCATAAATACTAATTTAATTG----AAGTGTTTT---TTTGGAGCA--TATTTGTGTGTGTG------------------T-----------------GTGTGTGTCAAC----TCTAG-------------------AAATAAAGT-TGCATGCATAGCAATTC------AAGCCG-AAATGCATGCAGTTATTA--ACAAAA-------TTGTTAAACCGT----------GCACCTT------------------ATCAG---AAAATGG-------TGTGCAATAAAACGGTGAATGTGTGCCATATTGGCTGC----AG------T-TC-------------------------------------------GGGAGCCTT---GTGAT-------TAAGGCGTG-TGCCTCTG--T----GA-GTG-TGGTGTATATTTA---TGTTGCCT-TTATGCTTGCAGTTCCAGCA-A--CACC--TCCCC------------------------------------TCCTGTACTTT--CCCGTTATTGACGCCAAGTGACCG---C---CGCCGTTC-AAAGAG
droAna3 scaffold_12911:4006771-4007100 + GT------GAAGT-GAGGTGCT------GC------------TTCAATTAGCGTAA------GTGAGTCG------CAGTACGTGAGGTT---------------------------------------TTGCGCCTGC----TCCAA--CT-----------AACCAAATAGAGT-TGCATGCAAGGAAAT------TCG-GTCGAAACTGCAGGCTGTTATTATTGTGG-A----------CG----------------------TTTTTTCGAAGCGGAGCGCCATCGGGCGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTGC-TGTT-GCTTTTTCTATGCCCAT-CA----------------------------------------AGTCGTCCAGTGGGT-C--------------CACACACA--TA---------CACACCA--ATTCA---TGCTGCCT-TTATGCTTGCAGTCCCCCCCC--------------------------------------------------CTACATAAT-----------TCGAGTGCAAGTGACCG---------A---CC-AAAGAG
droBip1 scf7180000396640:856057-856392 + CT------AAAGT-GAGGTGCT------GC------------TTCAATTTGCGTAA------GTGAGTCG------CAGTACGTGAGGTT---------------------------------------TTGCGCCTGC----TCCA--------ACTAGC-----CAAATAGAGT-TGCATGCAAGGGAAT------TCG-GTCGAAACTGCAAGCTGTTATTATTGTGG-A----------CT----------------------TTTTTTCAAAGTGGAGCGCCATCGGGTGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTGC-TGCTTTTT-----TGTGCCCATCA--------------------------------------GTGGGTCGCCCAGTGGGT-C--------------CCCA------CACACACAT-GCACACAA--ATTTA---TGCTGCCT-TTATGCTTGCAGTCCCCC-----------------------------------------------------ATACATATAA-----TTTCATCGAGTGCAAGTGACCG---------A---CC-AAAGAG
droKik1 scf7180000302313:466669-467056 + TA-------AAGG-CGAGTGCTGATGTTGGCC----------TACAATTAGCGTAAGTGCAAGTGAGTCGC-----CAGTACGTGTGGA-----------------------------T--TATTATGTGTGCGCCTGC----TCCAG------------------TGAAGAGAAT-TGCATGCACAGAAAT------TCG-GTCGAAACTGCAAGCTGTCATTATAACTGGA----------CC----TAC----------GCTCGCA------------------ATGGAGCGAAAGCGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCCTGCTGC-TCTGTTCA---------C-----------------------------------------------AGTCCCCAAGTGGCTCACAAGCAAACCCCCCCCCA------CACACACTC-GC---TCAATATTCA---TGCTGCCT-TTATGTTTGCAGCGCCCCCCT----------GCCCGCCCGTAC------ATA------TATAATTTGGA-TATATGTATTTATGTTAT---TCGAGTGCAAGTGACCGAAGCCA-CGACAACC-AAAGAG
droFic1 scf7180000453776:243371-243740 + GA-------AAAT-CCAGTGCT-----CGCTT----------TTTAATTAACGTAAGTGCAAGTGAATCG------TAGTACGTGAGGAA------------------------GGGGGTTTAGTA-TTATGCGCCCGC----TCCACC--AA---------------AAAAGAGTTTGCATGCACAGAAATTCGAATTTG-GTCGAAACTGCAAGCTGTTATTATAACGGGA------ATGGCC----AGT----------GCTTGTT------------------ATCGGGTGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTGC-TCTTTGCA---------C-AAC-AC----------------------------------------AATCCCCAAGTGGTA-C--------------AACA------CA---------CACATAAATACTTA---TGCTGCTTTTTATGCTTGCAGCCCCCACTTTATGGT-------------------TTTATA------TATG-----AACTGTATATATTT-----ATCCAACGAGTGCAAGTGACCG---------ACGTCCGAAAGAG
droEle1 scf7180000491280:1127895-1128275 + GG-------AAAT-CGAGTGCC-----CGCCG----------TTTAATTAACGTAAGTGCAAGTGAGTCG------GAGTACGTGAGCTG------------------------GGGGG--T---G-CTATGCGCCTGCCTGGCCCAGC--AA--------------AAAAAGAGTTTGCATGCACAGAAAT------TCG-GTCGAAACTGCAAGCTGTTATTATAACGGGA------ATGGCC----AGT----------GCTCGTT------------------ATCGGGTGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTTC-TCTTTTCTTTTTTTA--CTAAC-AC----------------------------------------AATCCCCAAGTGGTA-C---------------ACA------------CTC-ATACAGTAACACTTA---TGCTGCTT-TTATGCTTACAGCCCCCACTTTAAGGT-------------------TTTATATATATATATA-----TA-TGTATATATTTATCCAATCCAACGAGTGCAAGTGACCG---------ACGTCC-AAAGAG
droRho1 scf7180000778154:15136-15501 + ---------AAAT-CGAGTGCT-----CGCCG----------TTCAATTAACGTAAGTGCAAGTGAGTCGCAGTCGCAGTACGTGAGCT-------------------------GGGGG--TAAT----ATGCGCCTGG----CCCAGC--AA---------------AAAAGAGTTTGCATGCACAGAAAT------TCG-GTCGAAACTGCAAGCTGTTATTATAACGGGA------ATGGCC----AGT----------GCTTGTT------------------ATCGGTTAAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTGC-TCTTTTCTTTTTTTT--C-AAA-CC----------------------------------------AATCCCCAAGTGGTA-C---------------ACA------------CTC-ATACATTAATACTTA---TGCTGCCT-ATATGCTTGCAGCCCCCGTTTGAAGGT-------------------TTTATA------------------CATATATATTTATCCAATCCAACGAGTGCAAGTGACCG---------ACGTCC-AAAGAG
droBia1 scf7180000302136:3199506-3199924 - --------AGAGT-CAAGTGCT-----CTCGG----------CTTAATTAACGTAAGTGCAAGTGAGTCG------CAGTACGTGCGCTTG-----------------------GGGGG--TATTG-CTGTGCGCCAGC----TCCACCAAAAAAACAAACG-G--TAAAAAGAGT-TGCATGCACAGAAATTCGAATTCG-GTCGAAACTGCAAGCTGTTATTATAACGGGAACGGGAATGGCC----AGT----------GCTCGTT------------------ATCGGGTGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTGC-TCTTTTCG---------C-AGC-CC----------------------------------------AATCCCCAAGTGGCG-C---------------ACACCCA--TACACACCA-GCATACTTATGCTTA---TGCTGCCT-TTATGCTTGCAGCCCCCACTTATAGGTCTTTGCACACTCGTACGTGGTCGTG------TATA-----CA-CAAACATACCC-----AGCCAGCAAGTGCAAGTGACCG---AG-GCGACGGCC-AGGGAG
droTak1 scf7180000415310:194937-195319 + --------AAAGTCAAAGTGCT-----CGCTG----------TTTAATTAACGTAAGTGCAAGTGAGTCG------CAGTACGTGAGCTTGAG---------------------GGGGGTTT--TA-CTATGCGCCAGC----TCCACAAAAAA---------AAACAAAAAGAGT-TGCATGCACAGAAATTCGAATTCG-GTCGAAACTGCAAGCTGTTATTATAACGGGAACGGGAATGGC-----GGT----------GCTCGTT------------------ATCG-GTGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTGC-TCTCCTCA---------C-AAC-CC----------------------------------------AATCCCCAAGTGGTA----------------CACACCCA--T----AC---ATACATGCATACTTA---TGCTGCCT-TTATGCTTGCAGCCCCCACTTTTAGGT-------------------CT-ACA----CGTCTG-----T---GTGTATATTT-----ATCCAGCGAGTGCAAGTGACCG---------CCGTCC-AAAGAG
droEug1 scf7180000409787:626562-626914 - ---------A-AC-CAAGTGGT-----TACCG----------TTTAATTAGCGTAAGTGCAAGTGAGTCG------CAGTACGTGAGCTAG------------------------GGTGTATAATA-T----CGCCCGT-------AAAACAAAAAAAAACATAAACAAAAAGAGT-TGCATGCACAGAAATTCGAATTCG-GTCGAAACTGCAAGCTGTTATTATAACGGGA------ATGGCT----AGT----------GCTAGTT------------------ATCGGGTGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTGC-TCTTTTCA---------C-AAT-CC----------------------------------------AATCCCCAAGTGGTA----------------CACA------CCA---------ACATAAATACTTA---TGCTGCCT-TTATGCTTGCAGCCCCCACTATAAGGT-------------------CTGA--------------------------T---------ATTC-ACGAGTGCAAGTGACCG---------ACGTCC-AAAGAG
dm3 chr3R:24949175-24949594 + ---------AAGT-CAAGTGCT-----CGCCG----------TTTAATTAGCGCAAGTGCAAGTGAGTCG------CAGTACGTGAGCTTG------------------------GGGGCTTAATT-TCATGCGCCCGC----TCCACAACAAAAACAAGCG-AAACGAAAAGAGT-TGCATGCACAGAAATTCGAATTCG-GTCGAAACTGCAAGGTGTTATTATAACGGGA------ATGGCC----AGT----------GCTCGTT------------------ATCGGGTGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTGC-TCTTTTCA---------C-AAT-CCAATCCAACCCAATCCCCAACTCCCCCA-------CCCCC-AATCCCCAAGTGGCA-C--------------CACA------CAAACACTA-GCACATAAACACTTA---TGCTGCCT-TTATGCTTGCAGCCCC-ACTCGA------------------GCTCTTTTATG------TATG-----TA-TGTACATATTT-----ATCCAACGAATGCAAGTGACCG---------ACGTCC-AAAGAG
droSim2 3r:24309128-24309547 + dsi_18996 ---------AAGT-CAAGTGCT-----CGCCG----------TTTAATTAGCGTAAGTGCAAGTGAGTCG------CAGTACGTGAGCTTG-----------------------GGGGGTTTAATT-TCATGCGCCCGC----TCCACAACAAAAACAAGCG-AAACGAAAAGAGT-TGCATGCACAGAAATTCGAATTCG-GTCGAAACTGCAAGGTGTTATTATAACGGGA------ATGGCC----AGT----------GCTCGTT------------------ATCGGGTGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTGC-TCTTTTCA---------T-AAT-CCAATCCAACCCAATACCCAAC--------TCCCCACCACC-AAACCCCAAGTGGCT-C--------------CACA------CAAACACTA-GCACATAAACACTTA---TGCTGCCT-TTATGCTTGCAGCCCC-ACTCGA------------------GCTCTTTTATG------TATG-----TA-TGTACATATTT-----ATCCAACGAATGCAAGTGACCG---------ACGTCC-AAAGAG
droSec2 scaffold_4:3813896-3814328 + CTTCGTGGAAAGT-CAAGTGCT-----CGCCG----------TTTAATTAGCGTAAGTGCAAGTGAGTCG------CAGTACGTGAGCTTG-----------------------GGGGGTTTAATT-TCATGCGCCCGC----TCCACAACAAAAACAAGCG-AAACGAAAAGAGT-TGCATGCACAGAAATTCGAATTCG-GTCGAAACTGCAAGGTGTTATTATAACGGGA------ATGGCC----AGT----------GCTCGTT------------------ATCGGGTGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCATGCTGC-TCTTTTCA---------T-AAT-CCAATACAACCCAATCCCCAACTCCCCCA-------CCACC-AAACCCCAAGTGGCT-C--------------CACA------CAAACACTA-GCACATAAACACTTATGCTGCTGCCT-TTATGCTTGCAGCCCC-ACTCGA------------------GCTCTTTTATG------TTTG-----TA-TGTACATATTT-----ATCCAACGAATGCAAGTGACCG---------ACGTCC-AAAGAG
droYak3 3R:21548821-21549225 - ---------AAGT-CAAGTACT-----CGCCG----------TTTAATTAGCGTAAGTGCAAGTGAGTCG------CAGTACGTGAGCTTGGT---------------GGGGGA-GGGGCCTAATT-CCATGCGCCCGC----TCCACAACAAAAATAAGCG-AAACAAAAAGAGT-TGCATGCACAGAAATTCGAATTCG-GTCGAAACTGCAAGGTGTTATTATAACGGGA------ATGGCC----AGT----------GCTCGTT------------------ATCGGGTGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTAC-TCTTTTCA---------C-CAT-CCAATC----------CCCAACGCCCCAACTC-------CC-TATCCCCAAGTGGCA-A--------------CACA------CCAACACTC-GCACATGAATACTTA---TGTTGCCT-TTATGCTTGCAGTCCC-ACTTG---GC----------------T--TT----------------------TGTGTGTACTT-----ATCCAACGAGTGCAAGTGACCG---------ACGTCC-AGAGAG
droEre2 scaffold_4820:3082189-3082593 - --------AAAGT-CAAGTGCT-----CGCCG----------TTTAATTAGCGTAAGTGGAAGTGAGTCG------CAGTACGTGGGCTTGGT---------------GGGGGA-GGGGCTTAATT-CCATGCGCCCGC----TCCACAACAAAAAGAAGCG-AAACAGAAAGAGT-TGCATGCACAGAAATTCGAATTCG-GTCGAAACTGCAAGGTGTTATTATAACGGGA------ATGGCC----AGT----------GCTCGTT------------------ATCGGGTGAAAACGATTATGATTGTGCAATTAA----CAAAAGTGTGCCGCGCTA-----TTTCA---------C-AAT-CTAATT---CCCAATTCCCAAC--------TCCCTATCCCC-AATTCCCAAGTGGCA-C--------------CACA------CCAACACTC-GCACATGAATACTTA---TGCTGC-T-TTATGCTTGCAGCCCC-ACTTG---GC----------------TC--------------------------GTATGTATTT-----ATCCAACGAGTGCAAGTGACCG---------ACGTCC-AAAGAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CT-------ACGC-CAAGTGTT-----TGCT-----------TATAATTAG------TGCAAGTGGATTGGAGCA--AATACGTGAGTTTT--TGTTCATACACATGTCT----GGGGG--TG----C------TCTAC----TCCA-----A---------------TAAATAGT-TGCATGCAAAGTAAT------TCG-GTCGAAACTGCAAGCTGTTATT--AATGAAA------ATTGG-------TGGTTGGCTCTGCTG----------------CCACTATCAAATGAAAGCGATAAGAATTGTGCAATTAA----TGAAAGTGTGCCA--CTGC--------AG------TGTC-------------------------------------------GTGTGCCGTGCAGTGGTC-CCAAGCC-ACTCGTTTTTACAAA-----------------TACACATTTTTTATGCTGCCT-TTATGCTTGCAGTCCCCCCCC----------C------------------------------------------------------CCCTCTCGAGTGCAAGTGACCG---CCACCGTCGTTC-AAAGAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................T------TCG-GTCGAAACTGCAAGCTGT.............................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000001
..............................................................GTGGATTGGAGCA--AATAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001000000
.............................................................................................................................................................................................................................................................................................................................................GCCA--CTGC--------AG------TGTC-------------------------------------------GTGTGC.............................................................................................................................................................................................................2011.0010100000000
..............................................ATTAG------TGCAAGTGGATTGGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000010
...............................................................................................................................................................................................................................................................................................................................................CA--CTGC--------AG------TGTC-------------------------------------------GTGTGCCGT..........................................................................................................................................................................................................2111.0010100000000
..............................................ATTAG------TGCAAGTGGATTGGAGCA--............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGCTGCCT-TTATGCT...........................................................................................................................1880.1310100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATGCTGCCT-TTATGCC...........................................................................................................................1980.1310010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTATGCTGCCT-TTATGCTG..........................................................................................................................2180.1310100000000
droPer2
CT-------ACGC-CAAGTGTT-----TGCT-----------TATAATTAG------TGCAAGTGGATTGGAGCA--AATACGTGAGTTTT--TGTTCATACACATGTCT----GTGGG--TG----C------TCTAC----TCCA-----A---------------TAAATAGT-TGCATGCAAAGAAAT------TCG-GTCGAAACTGCAAGCTGTTATT--AATGAAA------ATTGG-------TGGTTGGCTCTGCTG----------------CCACTATCAAATGAAAGCGATAAGAATTGTGCAATTAA----TGAAAGTGTGCCA--CTGC--------AG------TGTC-------------------------------------------GTGTGCCGTGCAGTGGTC-CCAAGCC-ACTCGTTTTTACAAATACACACACTATGTATGTATATATTTTTTATGCTGCCT-TTATGTTTGCAGTCCCCCCC---------------------------------------------------------------------TCTCGAGTGCAAGTGACCG---CCACCGCCGTTC-AAAGAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................TTAG------TGCAAGTGGATTGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
droVir3
---------ACGC-CAAGTGAG-----TGTCATAAATACTAATTTAATTG----AAGTGTTTT---TTTGGAGCA--TATTTGTGTGTGTG------------------T-----------------GTGTGTGTCAAC----TCTAG-------------------AAATAAAGT-TGCATGCATAGCAATTC------AAGCCG-AAATGCATGCAGTTATTA--ACAAAA-------TTGTTAAACCGT----------GCACCTT------------------ATCAG---AAAATGG-------TGTGCAATAAAACGGTGAATGTGTGCCATATTGGCTGC----AG------T-TC-------------------------------------------GGGAGCCTT---GTGAT-------TAAGGCGTG-TGCCTCTG--T----GA-GTG-TGGTGTATATTTA---TGTTGCCT-TTATGCTTGCAGTTCCAGCA-A--CACC--TCCCC------------------------------------TCCTGTACTTT--CCCGTTATTGACGCCAAGTGACCG---C---CGCCGTTC-AAAGAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGCCAAGTGACCG---C---CGCCAA.........2311.001000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACGCCAAGTGACCG---C---C..............2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................GCTGC----AG------T-TC-------------------------------------------GGGAGCCTT---G......................................................................................................................................................................................................2011.001000000000000000000000000001000000000000000000000000000000000000
...........GC-CAAGTGAG-----TGTCATAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTCTG--T----GA-GTG-TGGTGT.....................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACGCCAAGTGACCG---C---CGCCGTTC-......2711.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTACTTT--CCCGTTATTGACGCCAAGT...........................2711.001000000000000000000000000000000000001000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTCTG--T----GA-GTG-TGGTGTATA..................................................................................................................................................2211.001000000000000000000000000000000000000000100000000000000000000000
..........................................................GTTTT---TTTGGAGCA--TATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000100000000000000000000000000000000
..........CGC-CAAGTGAG-----TGTCATCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCG---C---CGCCGTTC-AAA...1811.001000000000000000000000000010000000000000000000000000000000000000
.........ACGC-CAAGTGAG-----TGTCATAAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................TATTTGTGTGTGTG------------------T-----------------GTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000001000000000000000000000000000000000
................................................................................TTGTGTGTGTG------------------T-----------------GTGTGTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000010000000000000000000000000000000000
droAna3
GT------GAAGT-GAGGTGCT------GC------------TTCAATTAGCGTAA------GTGAGTCG------CAGTACGTGAGGTT---------------------------------------TTGCGCCTGC----TCCAA--CT-----------AACCAAATAGAGT-TGCATGCAAGGAAAT------TCG-GTCGAAACTGCAGGCTGTTATTATTGTGG-A----------CG----------------------TTTTTTCGAAGCGGAGCGCCATCGGGCGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTGC-TGTT-GCTTTTTCTATGCCCAT-CA----------------------------------------AGTCGTCCAGTGGGT-C--------------CACACACA--TA---------CACACCA--ATTCA---TGCTGCCT-TTATGCTTGCAGTCCCCCCCC--------------------------------------------------CTACATAAT-----------TCGAGTGCAAGTGACCG---------A---CC-AAAGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACATAAT-----------TCGAGTGCAAGTGACC.......................2511.001001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT-----------TCGAGTGCAAGTGACCG---------A---CC-......2311.001010000
droBip1
CT------AAAGT-GAGGTGCT------GC------------TTCAATTTGCGTAA------GTGAGTCG------CAGTACGTGAGGTT---------------------------------------TTGCGCCTGC----TCCA--------ACTAGC-----CAAATAGAGT-TGCATGCAAGGGAAT------TCG-GTCGAAACTGCAAGCTGTTATTATTGTGG-A----------CT----------------------TTTTTTCAAAGTGGAGCGCCATCGGGTGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTGC-TGCTTTTT-----TGTGCCCATCA--------------------------------------GTGGGTCGCCCAGTGGGT-C--------------CCCA------CACACACAT-GCACACAA--ATTTA---TGCTGCCT-TTATGCTTGCAGTCCCCC-----------------------------------------------------ATACATATAA-----TTTCATCGAGTGCAAGTGACCG---------A---CC-AAAGAGSizeHit CountTotal NormTotal
No Reads
droKik1
TA-------AAGG-CGAGTGCTGATGTTGGCC----------TACAATTAGCGTAAGTGCAAGTGAGTCGC-----CAGTACGTGTGGA-----------------------------T--TATTATGTGTGCGCCTGC----TCCAG------------------TGAAGAGAAT-TGCATGCACAGAAAT------TCG-GTCGAAACTGCAAGCTGTCATTATAACTGGA----------CC----TAC----------GCTCGCA------------------ATGGAGCGAAAGCGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCCTGCTGC-TCTGTTCA---------C-----------------------------------------------AGTCCCCAAGTGGCTCACAAGCAAACCCCCCCCCA------CACACACTC-GC---TCAATATTCA---TGCTGCCT-TTATGTTTGCAGCGCCCCCCT----------GCCCGCCCGTAC------ATA------TATAATTTGGA-TATATGTATTTATGTTAT---TCGAGTGCAAGTGACCGAAGCCA-CGACAACC-AAAGAGSizeHit CountTotal NormTotal
No Reads
droFic1
GA-------AAAT-CCAGTGCT-----CGCTT----------TTTAATTAACGTAAGTGCAAGTGAATCG------TAGTACGTGAGGAA------------------------GGGGGTTTAGTA-TTATGCGCCCGC----TCCACC--AA---------------AAAAGAGTTTGCATGCACAGAAATTCGAATTTG-GTCGAAACTGCAAGCTGTTATTATAACGGGA------ATGGCC----AGT----------GCTTGTT------------------ATCGGGTGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTGC-TCTTTGCA---------C-AAC-AC----------------------------------------AATCCCCAAGTGGTA-C--------------AACA------CA---------CACATAAATACTTA---TGCTGCTTTTTATGCTTGCAGCCCCCACTTTATGGT-------------------TTTATA------TATG-----AACTGTATATATTT-----ATCCAACGAGTGCAAGTGACCG---------ACGTCCGAAAGAGSizeHit CountTotal NormTotal
No Reads
droEle1
GG-------AAAT-CGAGTGCC-----CGCCG----------TTTAATTAACGTAAGTGCAAGTGAGTCG------GAGTACGTGAGCTG------------------------GGGGG--T---G-CTATGCGCCTGCCTGGCCCAGC--AA--------------AAAAAGAGTTTGCATGCACAGAAAT------TCG-GTCGAAACTGCAAGCTGTTATTATAACGGGA------ATGGCC----AGT----------GCTCGTT------------------ATCGGGTGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTTC-TCTTTTCTTTTTTTA--CTAAC-AC----------------------------------------AATCCCCAAGTGGTA-C---------------ACA------------CTC-ATACAGTAACACTTA---TGCTGCTT-TTATGCTTACAGCCCCCACTTTAAGGT-------------------TTTATATATATATATA-----TA-TGTATATATTTATCCAATCCAACGAGTGCAAGTGACCG---------ACGTCC-AAAGAGSizeHit CountTotal NormTotal
No Reads
droRho1
---------AAAT-CGAGTGCT-----CGCCG----------TTCAATTAACGTAAGTGCAAGTGAGTCGCAGTCGCAGTACGTGAGCT-------------------------GGGGG--TAAT----ATGCGCCTGG----CCCAGC--AA---------------AAAAGAGTTTGCATGCACAGAAAT------TCG-GTCGAAACTGCAAGCTGTTATTATAACGGGA------ATGGCC----AGT----------GCTTGTT------------------ATCGGTTAAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTGC-TCTTTTCTTTTTTTT--C-AAA-CC----------------------------------------AATCCCCAAGTGGTA-C---------------ACA------------CTC-ATACATTAATACTTA---TGCTGCCT-ATATGCTTGCAGCCCCCGTTTGAAGGT-------------------TTTATA------------------CATATATATTTATCCAATCCAACGAGTGCAAGTGACCG---------ACGTCC-AAAGAGSizeHit CountTotal NormTotal
No Reads
droBia1
--------AGAGT-CAAGTGCT-----CTCGG----------CTTAATTAACGTAAGTGCAAGTGAGTCG------CAGTACGTGCGCTTG-----------------------GGGGG--TATTG-CTGTGCGCCAGC----TCCACCAAAAAAACAAACG-G--TAAAAAGAGT-TGCATGCACAGAAATTCGAATTCG-GTCGAAACTGCAAGCTGTTATTATAACGGGAACGGGAATGGCC----AGT----------GCTCGTT------------------ATCGGGTGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTGC-TCTTTTCG---------C-AGC-CC----------------------------------------AATCCCCAAGTGGCG-C---------------ACACCCA--TACACACCA-GCATACTTATGCTTA---TGCTGCCT-TTATGCTTGCAGCCCCCACTTATAGGTCTTTGCACACTCGTACGTGGTCGTG------TATA-----CA-CAAACATACCC-----AGCCAGCAAGTGCAAGTGACCG---AG-GCGACGGCC-AGGGAGSizeHit CountTotal NormTotal
No Reads
droTak1
--------AAAGTCAAAGTGCT-----CGCTG----------TTTAATTAACGTAAGTGCAAGTGAGTCG------CAGTACGTGAGCTTGAG---------------------GGGGGTTT--TA-CTATGCGCCAGC----TCCACAAAAAA---------AAACAAAAAGAGT-TGCATGCACAGAAATTCGAATTCG-GTCGAAACTGCAAGCTGTTATTATAACGGGAACGGGAATGGC-----GGT----------GCTCGTT------------------ATCG-GTGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTGC-TCTCCTCA---------C-AAC-CC----------------------------------------AATCCCCAAGTGGTA----------------CACACCCA--T----AC---ATACATGCATACTTA---TGCTGCCT-TTATGCTTGCAGCCCCCACTTTTAGGT-------------------CT-ACA----CGTCTG-----T---GTGTATATTT-----ATCCAGCGAGTGCAAGTGACCG---------CCGTCC-AAAGAGSizeHit CountTotal NormTotal
No Reads
droEug1
---------A-AC-CAAGTGGT-----TACCG----------TTTAATTAGCGTAAGTGCAAGTGAGTCG------CAGTACGTGAGCTAG------------------------GGTGTATAATA-T----CGCCCGT-------AAAACAAAAAAAAACATAAACAAAAAGAGT-TGCATGCACAGAAATTCGAATTCG-GTCGAAACTGCAAGCTGTTATTATAACGGGA------ATGGCT----AGT----------GCTAGTT------------------ATCGGGTGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTGC-TCTTTTCA---------C-AAT-CC----------------------------------------AATCCCCAAGTGGTA----------------CACA------CCA---------ACATAAATACTTA---TGCTGCCT-TTATGCTTGCAGCCCCCACTATAAGGT-------------------CTGA--------------------------T---------ATTC-ACGAGTGCAAGTGACCG---------ACGTCC-AAAGAGSizeHit CountTotal NormTotal
No Reads
dm3
---------AAGT-CAAGTGCT-----CGCCG----------TTTAATTAGCGCAAGTGCAAGTGAGTCG------CAGTACGTGAGCTTG------------------------GGGGCTTAATT-TCATGCGCCCGC----TCCACAACAAAAACAAGCG-AAACGAAAAGAGT-TGCATGCACAGAAATTCGAATTCG-GTCGAAACTGCAAGGTGTTATTATAACGGGA------ATGGCC----AGT----------GCTCGTT------------------ATCGGGTGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTGC-TCTTTTCA---------C-AAT-CCAATCCAACCCAATCCCCAACTCCCCCA-------CCCCC-AATCCCCAAGTGGCA-C--------------CACA------CAAACACTA-GCACATAAACACTTA---TGCTGCCT-TTATGCTTGCAGCCCC-ACTCGA------------------GCTCTTTTATG------TATG-----TA-TGTACATATTT-----ATCCAACGAATGCAAGTGACCG---------ACGTCC-AAAGAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................AGTGAGTCG------CAGTACGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18118.00180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000410000201000000100000000000000100000000000000500000000000000000000000000000000000
...........GT-CAAGTGCT-----CGCCG----------TTTAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGAATGCAAGTGACCG---------AC...........2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GTGCAAGTGAGTCG------CAGTAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GCAAGTGCAAGTGAGTCG------CAGTAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000
.............................................................AGTGAGTCG------CAGTACGTGAGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000100
.............................................................AGTGAGTCG------CAGTACGTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000110000000000000000000000000
.............................................................................AGTACGTGAGCTTG------------------------GGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000100000000000000
.............................................................................................................................................................AAGCG-AAACGAAAAGAGT-........................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200
..........................................................................................................................................................................................................................................................................................................................AATTAA----CAAAAGTGTGCCGTG......................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCAAGTGACCG---------ACGTCC-A.....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCC-ACTCGA------------------GCTCTTTTATG------TATG-----TA-............................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................AGTCG------CAGTACGTGAGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................GCC----AGT----------GCTCGTT------------------ATCGGGTG..................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................GTGCAAGTGAGTCG------CAGTACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................................................GTACGTGAGCTTG------------------------GGGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................ATTCG-GTCGAAACTGCAAGGT...............................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGTGACCG---------ACGTCC-AAAG..2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................AGCGCAAGTGCAAGTGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................GCAAGTGAGTCG------CAGTACGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGACCG---------ACGTCC-AAAGA.2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................AAGCG-AAACGAAAAGAGT-TGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................G------CAGTACGTGAGCTTG------------------------GGGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGCAAGTGACCG---------ACGTC........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..............................................ATTAGCGCAAGTGCAAGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................TGCGCCCGC----TCCACAACAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTT-----ATCCAACGAATGCATC............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGA------------------GCTCTTTTATG------T.......................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GTGAGTCG------CAGTACGTGAGCTTG------------------------G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................................................................................................................................................................................CGGGTGAAAACGATTAGGATT...................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................AAGTGAGTCG------CAGTACGTGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----ATCCAACGAATGCAAGTGACC.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TTGTGCAATTAA----CAAAAGTGTGCCGTG......................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........AAGT-CAAGTGCT-----CGCCG----------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................G----------TTTAATTAGCGCAAGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................ATGCGCCCGC----TCCACAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................ATGGCC----AGT----------GCTCGTT------------------ATCGG.....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................TTATTATAACGGGA------ATGGCC----A...............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................GTGCAAGTGAGTCG------CAGTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
....................................................................CG------CAGTACGTGAGCTTG------------------------GGGGCTTAATT-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................................................................................................................................................................................................G-GTCGAAACTGCAAGGTG..............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................TTATTATAACGGGA------ATGGCC----................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................GTCGAAACTGCAAGGTGT.............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................AGTGCAAGTGAGTCG------CAGTACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAAGTGACCG---------ACGTC........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................GTCG------CAGTACGTGAGCTTG------------------------GG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................GTGAGTCG------CAGTACGTGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................TTAATT-TCATGCGCCCGC----TCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................GA------ATGGCC----AGT----------GCTCGTT------------------ATC.......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAATGCAAGTGACCG---------ACGTC........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................AGTGAGTCG------CAGTACGTGAGCTTG------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................AGCG-AAACGAAAAGAGT-TGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................AACGGGA------ATGGCC----AGT----------GCTCGT.............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................................CG------CAGTACGTGAGCTTG------------------------G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................ATAACGGGA------ATGGCC----AGT----------GC.................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...........GT-CAAGTGCT-----CGCCG----------TTTAATTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..................................................................GTCG------CAGTACGTGAGCTTG------------------------G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................GCAAGGTGTTATTATAACGGG.................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................CGAATTCG-GTCGAAACTGCAAGGTGT.............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................GA------ATGGCC----AGT----------GCTCGTT------------------ATCG......................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AATCCCCAAGTGGCA-C--------------CA...............................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GTGAGTCG------CAGTACGTGAGCTTG------------------------GGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................CGAATTCG-GTCGAAACTGCA...................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................C-TCTTTTCA---------C-AAT-CCAATCCA..................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---TGCTGCCT-TTATGCTTG.........................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................GCC----AGT----------GCTCGTT------------------ATCGGGTGAAAACG............................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................................................................................................................................CAAGCG-AAACGAAAAGAGT-........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GCA-C--------------CACA------CAAACACTA-GCACA........................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................AACAAGCG-AAACGAAAAGAGT-TGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................................................................................................................................................................................................................................................GCAATTAA----CAAAAGTGTGCCGTGCTG...................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TGCCGTGCTGC-TCTTTTCA---------C-A.............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACATATTT-----ATCCAACGAATG................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................GCC----AGT----------GCTCGTT------------------ATCGGGTGAA................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................AAAGTGTGCCGTGCTGC-TCTTTTCA---------................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTT-----ATCCAACGAATGCAAG............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTT-----ATCCAACGAATGC...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................GCGCCCGC----TCCACAACAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................AGTCG------CAGTACGTGAGCTTG------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.......................................................AGTGCAAGTGAGTCG------CAGTACGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGCAGCCCC-ACTCGA------------------GCTCTTTT.................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGCAGCCCC-ACTCGA------------------GCT......................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................................................................................................................................................................................................................TCGGGTGAAAACGATTAGGATTGTGCAA.............................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGCAAGTGACCG---------ACGTCC-......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................CC----AGT----------GCTCGTT------------------ATCGGGT...................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................CG------CAGTACGTGAGCTTG------------------------GGGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
.....................................................CAAGTGCAAGTGAGTCG------CAGTACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................CGAAAAGAGT-TGCATGCACAGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................GTCG------CAGTACGTGAGCTTG------------------------GGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................GTCG------CAGTACGTGAGCTTG------------------------GGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.....................................................................G------CAGTACGTGAGCTTG------------------------GG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCC-ACTCGA------------------GCTCTTTTATG------TATG-----...............................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.........................................................TGCAAGTGAGTCG------CAGTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TGCACAGAAATTCGAATTCG-G..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
....................................................................CG------CAGTACGTGAGCTTG------------------------GGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.....................................................................................................................................................................................................................................................................................................TGAAAACGATTAGGATTGTGC...............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................TTCG-GTCGAAACTGCAAGGTG..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................GTGAGTCG------CAGTACGTGAGCTTG------------------------GGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATG-----TA-TGTACATATTT-----ATCCAACGAA..................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................GCACAGAAATTCGAATTCG-GTCGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................GAAAAGAGT-TGCATGCACAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----ATCCAACGAATGCAAGTGACCG---------ACG..........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................GTGAGTCG------CAGTACGTGAGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................GT----------GCTCGTT------------------ATCGGGTGAAAACGA...........................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
droSim2
---------AAGT-CAAGTGCT-----CGCCG----------TTTAATTAGCGTAAGTGCAAGTGAGTCG------CAGTACGTGAGCTTG-----------------------GGGGGTTTAATT-TCATGCGCCCGC----TCCACAACAAAAACAAGCG-AAACGAAAAGAGT-TGCATGCACAGAAATTCGAATTCG-GTCGAAACTGCAAGGTGTTATTATAACGGGA------ATGGCC----AGT----------GCTCGTT------------------ATCGGGTGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTGC-TCTTTTCA---------T-AAT-CCAATCCAACCCAATACCCAAC--------TCCCCACCACC-AAACCCCAAGTGGCT-C--------------CACA------CAAACACTA-GCACATAAACACTTA---TGCTGCCT-TTATGCTTGCAGCCCC-ACTCGA------------------GCTCTTTTATG------TATG-----TA-TGTACATATTT-----ATCCAACGAATGCAAGTGACCG---------ACGTCC-AAAGAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTT-----ATCCAACGAATGC...............................1911.00100001000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTTGCAGCCCC-ACTCGA------------------.........................................................................................1911.00100001000000000000
......................................................AAGTGCAAGTGAGTCG------CA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
...........................CGCCG----------TTTAATTAGCGTAAGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
..........................................................................................................................................................AACAAGCG-AAACGAAAAGAGT-........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
...............................................................................................................................................................................................................................................................................................................TAGGATTGTGCAATTAA----.....................................................................................................................................................................................................................................................................................................1711.00100000000100000000
...........................................................................................................................................................ACAAGCG-AAACGAAAAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAACGAATGCAAGTGACCG---------ACGTCC-A.....2811.00100000001000000000
.............................................................AGTGAGTCG------CAGTACGTGAGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
.......................................................................................................................................................AAAAACAAGCG-AAACGAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.00200000200000000000
.................................................................................................................................................................................................................................................GGCC----AGT----------GCTCGTT------------------ATCGGGTG..................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
..............................................................................GTACGTGAGCTTG-----------------------GT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1550.20100000000010000000
droSec2
CTTCGTGGAAAGT-CAAGTGCT-----CGCCG----------TTTAATTAGCGTAAGTGCAAGTGAGTCG------CAGTACGTGAGCTTG-----------------------GGGGGTTTAATT-TCATGCGCCCGC----TCCACAACAAAAACAAGCG-AAACGAAAAGAGT-TGCATGCACAGAAATTCGAATTCG-GTCGAAACTGCAAGGTGTTATTATAACGGGA------ATGGCC----AGT----------GCTCGTT------------------ATCGGGTGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCATGCTGC-TCTTTTCA---------T-AAT-CCAATACAACCCAATCCCCAACTCCCCCA-------CCACC-AAACCCCAAGTGGCT-C--------------CACA------CAAACACTA-GCACATAAACACTTATGCTGCTGCCT-TTATGCTTGCAGCCCC-ACTCGA------------------GCTCTTTTATG------TTTG-----TA-TGTACATATTT-----ATCCAACGAATGCAAGTGACCG---------ACGTCC-AAAGAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
CTTCGTGGAAAGT-CAAGTGCT-----..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050302
..TCGTGGAAAGT-CAAGTGCT-----CGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020110
....GTGGAAAGT-CAAGTGCT-----CGCCG----------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020200
.TTCGTGGAAAGT-CAAGTGCT-----..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0022000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGTGACCG---------ACGTCC-AAAGA.2311.0011000
.TTCGTGGAAAGT-CAAGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
...CGTGGAAAGT-CAAGTGCT-----CGCCG----------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001
CTTCGTGGAAAGT-CAAGTGCT-----CGCCG----------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC-ACTCGA------------------GCTCTTTTATG------TTTG-----T..............................................................2411.0011000
...........................................TTAATTAGCGTAAGTGCAAGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
.TTCGTGGAAAGT-CAAGTGCT-----CGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTTTTATG------TTTG-----TA-TGTACA......................................................2311.0011000
CTTCGTGGAAAGT-CAAGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
..........................................TTTAATTAGCGTAAGTGCAAGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001
.TTCGTGGAAAGT-CAAGTGCT-----CGCCG----------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
.TTCGTGGAAAGT-CAAGTGCT-----C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
droYak3
---------AAGT-CAAGTACT-----CGCCG----------TTTAATTAGCGTAAGTGCAAGTGAGTCG------CAGTACGTGAGCTTGGT---------------GGGGGA-GGGGCCTAATT-CCATGCGCCCGC----TCCACAACAAAAATAAGCG-AAACAAAAAGAGT-TGCATGCACAGAAATTCGAATTCG-GTCGAAACTGCAAGGTGTTATTATAACGGGA------ATGGCC----AGT----------GCTCGTT------------------ATCGGGTGAAAACGATTAGGATTGTGCAATTAA----CAAAAGTGTGCCGTGCTAC-TCTTTTCA---------C-CAT-CCAATC----------CCCAACGCCCCAACTC-------CC-TATCCCCAAGTGGCA-A--------------CACA------CCAACACTC-GCACATGAATACTTA---TGTTGCCT-TTATGCTTGCAGTCCC-ACTTG---GC----------------T--TT----------------------TGTGTGTACTT-----ATCCAACGAGTGCAAGTGACCG---------ACGTCC-AGAGAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........GT-CAAGTACT-----CGCCG----------TT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1714.00400000000004
...............................................................................................................................................................................................................................................................................................ATCGGGTGAAAACGATTAGGATT...................................................................................................................................................................................................................................................................................................................2312.00202000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------CCAACACTC-GCACATGAATACC................................................................................................................................................2411.00100100000000
.........................................................................................................................................................................................................................................................AGT----------GCTCGTT------------------ATCGGGTT..................................................................................................................................................................................................................................................................................................................................1811.00100100000000
...........GT-CAAGTACT-----CGCCG----------TTTAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAACGAGTGCAAGTGACCG---------ACG..........2511.00101000000000
droEre2
--------AAAGT-CAAGTGCT-----CGCCG----------TTTAATTAGCGTAAGTGGAAGTGAGTCG------CAGTACGTGGGCTTGGT---------------GGGGGA-GGGGCTTAATT-CCATGCGCCCGC----TCCACAACAAAAAGAAGCG-AAACAGAAAGAGT-TGCATGCACAGAAATTCGAATTCG-GTCGAAACTGCAAGGTGTTATTATAACGGGA------ATGGCC----AGT----------GCTCGTT------------------ATCGGGTGAAAACGATTATGATTGTGCAATTAA----CAAAAGTGTGCCGCGCTA-----TTTCA---------C-AAT-CTAATT---CCCAATTCCCAAC--------TCCCTATCCCC-AATTCCCAAGTGGCA-C--------------CACA------CCAACACTC-GCACATGAATACTTA---TGCTGC-T-TTATGCTTGCAGCCCC-ACTTG---GC----------------TC--------------------------GTATGTATTT-----ATCCAACGAGTGCAAGTGACCG---------ACGTCC-AAAGAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................GTGGGCTTGGT---------------GGGGGA-GGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000130
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTT-----ATCCAACGAGTGCAAGT...........................2113.0030000300
...................................................................................TGGGCTTGGT---------------GGGGGA-GGGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTATTT-----ATCCAACGAGTGCAAGTGACC.......................2911.0010000100
...................................................................................TGGGCTTGGT---------------GGGGGA-GGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
...........................................................................................GT---------------GGGGGA-GGGGCTTAATT-CCATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CACA------CCAACACTC-GCACATGAATACT................................................................................................................................................2611.0011000000
................................................................................................................................................................................................................................................................................................................ATGATTGTGCAATTAA----CAAAAGTGT............................................................................................................................................................................................................................................................................................2511.0010000010
..................................................................................GTGGGCTTGGT---------------GGGGGA-GGGGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTT-----ATCCAACGAGTGC...............................1811.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGTGACCG---------ACGTCC-AAAGAG2311.0010000100
........................................................................................TTGGT---------------GGGGGA-GGGGCTTAATT-CCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAGTGCAAGTGACCG---------AC...........2011.0010000100
..................................................................................GTGGGCTTGGT---------------GGGGGA-GGGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100

Generated: 05/17/2015 at 10:22 PM