ID:

dps_420

 Coordinate:

2:8291000-8291150 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [Dpse\GA27086:3]; CDS [Dpse\GA27086-cds]; intron [Dpse\GA27086-in]

Repeatable elements

NameClassFamilyStrand
(CTGTG)nSimple_repeatSimple_repeat+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCGGGCAGTACGTTGCTCCTCATCCAGTGCGTTTGCTGTGTACTGATGATAATTGCAATTATGAAATTGCCTGCGGATGACGATGGAAACTAATTTTCCACATGTCCACAGCTGTGCTGTGCTGTGCTGCGGTGTCCTGTCTCCCTCTCTGTACATTGATTAGATAAGTAATTGTGAATTGTGCTCTACCGCTCTTTGCAGGCAACAACTGGGCCAAGGGCCACTACACAGAGGGCGCCGAACTGATCGAA
**************************************************....((((((....))))))(((((((.((((.((((((.....))))))..))))((((((........))))))..((((((................(((((..(((((......)))))......)))))..))))))..)))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902012
CNS imaginal disc
 GSM444067
head
 V112
male body		 GSM343916
embryo
..........................................................................................................................................................................................................CAACAACTGGGCCAAGGGC.............................. 19 0 2 1.00 2 2 0 0 0 0
.............................................................................................................................................................................................................................CACTACACAGAGGGCGCCGAACT....... 23 0 2 1.00 2 2 0 0 0 0
......................................................................................................................................................................................................................CAAGGGCCACTACACAGAGGGCGC............. 24 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................................................................ACACAGAGGGCGCCGAACT....... 19 0 2 0.50 1 1 0 0 0 0
......................................................................................................................................................................................................................................GAGGGCGCCGAACTGATCG.. 19 0 2 0.50 1 0 0 1 0 0
..............................................................................................................................................................................................................................ACTACACAGAGGGCGCCGAACT....... 22 0 2 0.50 1 1 0 0 0 0
........................................................................................................................................................................................................GGCAACAACTGGGCCAAGGGCC............................. 22 0 2 0.50 1 1 0 0 0 0
...................................................................................................................................................................................................................................ACAGAGGGCGCCGAACTGATCG.. 22 0 2 0.50 1 0 0 0 1 0
.........................................................................................................................................................................................................GCAACAACTGGGCCAAGG................................ 18 0 4 0.50 2 2 0 0 0 0
.............................................................................................................................................................................................................................CACTACACAGAGGGCGCCG........... 19 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................................................................................AGAGGGCGCCGAACTGATCG.. 20 0 2 0.50 1 0 1 0 0 0
......................................................................................................................................................................................................CGGGCAACAACTGGGCCAAGGGCC............................. 24 1 3 0.33 1 1 0 0 0 0
.....................................................................................................................................................................................................GCGGGCAACAACTGGGCCAAGGGC.............................. 24 1 3 0.33 1 1 0 0 0 0
.......................................................................................................................................................................................................GGGCAACAACTGGGCCAAGGGC.............................. 22 1 3 0.33 1 1 0 0 0 0
......................................................................................................................................................................................................TGGGCAACAACTGGGCCAAGGGC.............................. 23 2 4 0.25 1 1 0 0 0 0
........................................................................................................................................................................................................GGCAACAACTGGGCCAAGG................................ 19 0 4 0.25 1 1 0 0 0 0
..........................................................................................................................................................................................................CAACAACTGGGCCAAGGG............................... 18 0 4 0.25 1 1 0 0 0 0
..........................................................................................................CACTGCTGTGCTGTGCTGTGCTG.......................................................................................................................... 23 1 16 0.06 1 0 0 0 0 1
.......................................................................TGCGGAGGAAGATGGAAA.................................................................................................................................................................. 18 2 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

AGCCCGTCATGCAACGAGGAGTAGGTCACGCAAACGACACATGACTACTATTAACGTTAATACTTTAACGGACGCCTACTGCTACCTTTGATTAAAAGGTGTACAGGTGTCGACACGACACGACACGACGCCACAGGACAGAGGGAGAGACATGTAACTAATCTATTCATTAACACTTAACACGAGATGGCGAGAAACGTCCGTTGTTGACCCGGTTCCCGGTGATGTGTCTCCCGCGGCTTGACTAGCTT
**************************************************....((((((....))))))(((((((.((((.((((((.....))))))..))))((((((........))))))..((((((................(((((..(((((......)))))......)))))..))))))..)))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body
...........................................................................................................................................................................................................................AGGTAATGTGACTCCCGCG............. 19 3 20 0.20 4 2 2
.........TGAAACGAAGAGTGGGTCAC.............................................................................................................................................................................................................................. 20 3 7 0.14 1 1 0
......................................................................................................................................................................................CGAGAGGGCGAAAAACGTC.................................................. 19 2 9 0.11 1 1 0
...............................................................................................................................................................................................................TGACCCGGTTGCCGAAGATG........................ 20 3 15 0.07 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:8290950-8291200 + dps_420 TCGGGCAG------TA--CGTTGCT---------------------CCTCATCCA-----------------GT--------------GCGTTTGCTGTGTACTGATGATAATTGCAATTATGAAATTGCCTGCGGATGACGATGGAAACTAATTTTCCACATGTCCACAGCTGT-----G----------CTGT-G------------CTGT-GCTGCGGTGTCC------------------T----------------------------------------------------------------GTCTCC------------CTCTCTGTA------CATTGATTAGATAA----GTAATTGTGAA-----------------------------------TTGTGCT-CT---------------------------------------------------------------------------------------------------------------------------------------------------ACCGCTC-TTTGCAGGCAACAACTGGGCCAAGGGCCACTACACAGAGGGCGCCGAACTGATCGAA
droPer2 scaffold_0:2126753-2126997 + TCGGGCAG------TA--CGTTGCT---------------------CCTCATCCA-----------------GC---------------AGTTTGCTGTGTACTGATGATAATTGCAATTATGAAATTGCCTGCGGTTGACGATGAAAATTAATTTTCCACATGTCCACAGCTGT-----G----------CTGT-G------------CTGTGGTGTC------C------------------T----------------------------------------------------------------GTCTCC------------CTCTCTGTA------CATTGATTAGATAA----GTAATGGTGAA-----------------------------------TTGTGCT-CT---------------------------------------------------------------------------------------------------------------------------------------------------ACCGCTC-TTTGCAGGCAACAACTGGGCCAAGGGCCACTACACAGAGGGAGCCGAACTGATCGAA
droWil2 scf2_1100000004921:999998-1000232 - -------------------------------------------------------------------------------------------------------TGATGATGATTGCAATTATAAAATGGCCTGCGGCTGACGATTAAAATTAATTTTGTACATGTCAGCTGGCAC-----------------------------------------------------------------------------------------------------TTGGCGAGTGTGTATCTGTGTGTGTATCTGTGTGTGTAT------------CTCTGTGTGTGTGTGTGTTGATTAGATAG----ACATTTGTAAAAGCCA----------------------------------------AATTTAA------------------------------------------------------------------AATTC--------------------------------------------------------CAATATCT----------TA-TTTACAGGCAACAACTGGGCCAAGGGTCATTATACAGAGGGTGCCGAATTAATCGAT
droVir3 scaffold_13047:15788336-15788669 + dvi_17038 GCTGT----------AGCTGTTGCTGCCTGTGCTGGAGATGCGGC------------------------------------------TGTCCGGAT----TGTTGATGATAATTGCAATTATAAAATAGCCTGCGGATGACGATGAAAATTAATTTCGTACATGTCACTCATCACAACATGT-TG------------ATATTATTG---TCGTGGTT--------ATGAGTGTGTGTTT-TTCCCTG------TGCG---------------------------------------------TGTGCAGGTGTGCATGTGCAGGAGG---GA----AGTGTGTGCTGCTTAGTTAATTATGTTA----------------------------------------------------------------------------------------------------------------------TTGT-------ATATCTACTTGCACATAT---ATCCAGCAACTGACC---------------------TCACCTTT------CTGCTCTCCAACAGGCAACAACTGGGCCAAGGGCCACTACACAGAAGGCGCCGAGCTGATCGAT
droMoj3 scaffold_6540:19298787-19299111 + GCTGTTG-------------------------CTGGGGACGTGGCTGCATGTC--------------------------------------CGGAT----TGTTGATGATAATTGCAATTATAAAATAGCCTGCGGATGACGATGAAAATTAATTTTGTACATGTCACTCAGCACAATGTGC-TGCTGTTAATGCTGTCATTGT------TGT--------------GCATGTGTCTTTATTAACTGCTCGCATGTG---------------------------------------------TGTGAGTGTGTGC------------CTCTGTGTGTGTGTGTGCTGATTAGATAAATATGTAA----------------------------------------------------------------------------------------------------------------------TTGTTATGCCTAT-------------------------------ACCTATTCATCTCTTCATCTGGC----TAT-TTATCTA---CCC-CGCACAGGCAACAACTGGGCCAAGGGACACTACACAGAGGGCGCCGAGCTGATCGAT
droGri2 scaffold_14830:4226506-4226751 - ----------------------------------------------------------------------------------------------------TGTTAATGATAATTGTAATTATAGAATGGTCTGCGAATGAAGATGAAAATTAATTTTGTACATGTCAATCAACACAACATAT-TG------TTCT---------------TGT------------------------------------------------------------------------------------GTGTGCTTAAGGGGAGAT------------TCTGT----AGTCTGTGCTCATTTAATAAATATATAA----------------------------------------------------------------------------------------------------------------------TTGG-------AAAACTTCTGATGCATATTAGATCCA-CTGCTCACTTATGCA---------------------------------TC-TTTACAGGCAACAACTGGGCCAAGGGCCACTACACAGAGGGCGCCGAACTGATCGAC
droAna3 scaffold_13340:21937040-21937100 - ---------------------------------------------------------------------------------------------------------ATGATGATTGCAATTATAAAATGGCCTGCGGATGACGACGAAAATTAATTTTGTACATGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396583:250959-251037 + A--------------------------------------------------------------------------------------------------------------------ATTATGAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTAA---TCT-TACTTAGGCAACAACTGGGCCAAGGGCCATTACACAGAAGGCGCCGAACTGATCGAC
droKik1 scf7180000302475:1024489-1024801 + -------------------------------------------------------------------------------------------------------TGAGGATGATTGTAATTATAGAATGGCCTGCGGATGACGATGAAAATTAATTTTGTACATGTCAGCGGCTGT-----GCA------TGATGTTGGTTAGTCCGCTGCTGTTG-------------------------------------ATTTGCCGCGAACTTTGATTTGCATTTC--------------------------------------------------------------------------------------CCAAGAGCCGAAGTCAAGCC-TGAAGGCAGCGGGAAATTAA----AGCCT-AATTAAATAAAGAGAATTTGAGATTTTAAC-------TAAATAATTTAATGTGGAATTTATGTCTTAGTT-----------------------------------------------------------ATATTAATTTCTCTT-A----CTT-TCCGCAGGCAACAACTGGGCCAAGGGCCACTACACAGAGGGCGCCGAGCTGATCGAC
droFic1 scf7180000453826:138262-138376 + GAGGGCAGCAATCTGA--ACTTGGG--------------------------TCCAACGCACTTC--GCACC-----------------GCTGCTGA----CGGTGATGATGACTGCAATTATGAAATGGCCTGCGGAGGCTGACGAAAATTAATTTTGTACATGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491280:4230087-4230245 + GCTGGCAG------GA--CCTTCCT---------------------CC---CCCTCCCCACATCACCCTCAGTTGCCAT--------TCATGCTGA----TGGTGATGATGATTGCAATTATAAAATGCCCTGCGGATGATGACGAAAATTAATTTTGTACATGTCAGCCGCTGC-----T---------GCTGCTT------------TTGCTACTGC------TG--------------TAATGACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779538:464273-464370 + CCT------------------------------------------------------------------CCGATGCCGT--------TGATGCTGA----TGGTAATGATGCTTGCAATTATAAAATGCCCTGCGGATAATGATGAAAATTAATTTTTCACATGTCAGCCGATGT-----G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302075:3017998-3018101 + G--------------------------------------------------------------------------------------------------------ATGATGATTGCAATTATAAAATGGCCTGCGGATGACGACGAAAATTAATTTTGTACATGTCAGCCGCTGT-----T---------GATGTTGATGTTGC------TGCTGCCTC---------------------------------------------------TGTGTTCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000414170:24362-24432 - G--------------------------------------------------------------------------------------------------------ATGATGATTGCAATTATGAAATGGCCTGCGGATGACGACGAAAATTAATTTTGTACATGTCAGGCGCTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409787:1810573-1810863 + GCGGCCAG------GA--CCTCGC----------------------------AAGCCACACTTCATCCTCAGGTGCCAG--------GGAGGATGA----TGGCGTTGATGATTGCAATTATAAAATGGCCTGCGGATGATGATGAAAATTAATTTTGTACATGTCAGCCGTTGT-----T---------GCTTC---------------TGGGGCTGC------TG--------------TAATGACCCACAATAG-CGCGAATTTTGATTA------------------------------------------------------------------------------GCTTA----GAACAGG-AAC-----------------------------------ATGTGCT-TCAATTTAAGCAGAAATAGTT----------------------------------------------------AAGACTAA-----------------------------------------------------------ATCTT--------CTT-TTCGCAGGAAACAACTGGGCTAAGGGCCACTATACAGAGGGCGCTGAGCTGATTGAT
dm3 chr3R:23798823-23799166 - GCGGTCAG------GA--CCTCCCG--------------------------GCCGGCCCACTTTATGCTCAGCTGCCATGAGGATAATGACCATGA----TGGCTATGATGATTGCAATTATAAAATGGCCTGCGGATGACGATGAAAATTAATTTTGTACATGTCAGACGCTGT-----T---------GC------------------TGTGGCCTC------AA--------------TAATGACCCACAAACGCCGCGAACTTCGATGAGTTTTGGCGGATGAGTA-------------------------------------------------------------GC-------ACACA------------------GC--------T--------A-TTATATGGT-CTAATTTAA-----------------GCTTAACATATATATGAATAGTTTAGT-----ATATATTACATTGTAA--------------------------------------------------------------TAACATCTTGT-T----TAT-ATCACAGGCAACAACTGGGCCAAGGGCCATTACACAGAGGGCGCCGAGCTGATCGAT
droSim2 3r:23197990-23198342 - dsi_18228 GCGGTCAG------GA--CCTCCCG--------------------------GCCGGCCCACTTCATGCTCAGCTGCCATGAGGATAATGACTATGA----TGGCTATGATGATTGCAATTATAAAATGGCCTGCGGATGACGATGAAAATTAATTTTGTACATGTCAGGCGCTGT-----T---------GC------------------TGTGGCCTC------CA--------------TAATGACCCACAAACGCCGCGAACTTTGATGAGTTTTGGCG---GAGTA-------------------------------------------------------------GC-------ACACA------------------GC--------T--------A-TTATATGAT-CTAATTTAAGTACCGATAGCTTAGGAGCTTAACCTTTATATGAATAGTCTTCT-----ATGTACT-------------------------------------------------------------------ATAGTAACATCTTGT-T----TCT-ATCACAGGCAACAACTGGGCCAAGGGCCACTACACAGAGGGCGCCGAGCTGATCGAC
droSec2 scaffold_22:421306-421648 - GCGGTCAG------GA--CCTCCCG--------------------------GCCGGCCCACTTCATGCTCAGCTGCCATGAGGATAATGACTATGA----TGGCTATGATGATTGCAATTATAAAATGGCCTGCGGATGACGATGAAAATTAATTTTGTACATGTCAGGCGCTGT-----T---------GC------------------TGTGGCCTC------CG--------------TAATGACCCACAAACGCCGCGAACTTTAATGAGTTTTGGCG---GAGTA-------------------------------------------------------------GC-------GCACA------------------GC--------T--------A-TTATATGAT-CTAATTTAAGTACCGATAGCTTAGGAGCTTAACATTTATATGAATATT-----------------GCATTA-----------------------------------------------------------------TAACATTTCGT-T----TAT-ATCACAGGAAACAACTGGGCCAAGGGCCACTACACAGAGGGCGCCGAGCTGATCGAC
droYak3 3R:22700732-22701033 + ---------------------------------------------------------------------------------------------------------ATGATGATTGCAATTATAAAATGGCCTGCGGATGACGACGAAAATTAATTTTGTACATGTCAGGCGCTGT-----T---------GC------------------TGCGGCTTC------CA--------------TAATGACCCACAATCGCCGGGAACTTTGATGAGTTTTGGCG---TGGTA-------------------------------------------------------------GC-------T--TA------------------GCTATGAAGCT--------A-TGAAGCTAT-CTAATTTAAAGACTAGGAGTTTAAAATCTTAAGATGTATTTGAATAGTCTTAT-----ATATATGTGATTGTAATT------------------------------------------------------CTATA----TATTTGGT-TA---AAC-ATTACAGGCAACAACTGGGCCAAGGGCCACTACACAGAGGGCGCCGAGCTGATCGAC
droEre2 scaffold_4820:4245845-4246157 + C-----------------------G--------------------------GTCGGCCCACTTCATCCTCAG---------------TGACCATGA----TGGCTATGATGATTGCAATTATAAAATGGCCTGCGGATGACGACGAAAATTAATTTTGTACATGTCAGGCGCTGT-----G---------GCTGCGG------------CTGTGGCTTC------CG--------------TAATGACCCACAAACGCCGCGAACTTTGATGAGTTTTGGCT---TAGTA-------------------------------------------------------------GC-------A--TA------------------GC--------T--------G-TTAAGCGAT-CCAATTTAAAGACCGGCAGTTTGAGAGTTTAAGATGCATTTGAATAGTATTCT-----ATATATT-------------------------------------------------------------------ATA-------------------TA-TTCGCAGGCAACAACTGGGCCAAGGGCCACTACACAGAGGGCGCCGAGCTGATCGAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TCGGGCAG------TA--CGTTGCT---------------------CCTCATCCA-----------------GT--------------GCGTTTGCTGTGTACTGATGATAATTGCAATTATGAAATTGCCTGCGGATGACGATGGAAACTAATTTTCCACATGTCCACAGCTGT-----G----------CTGT-G------------CTGT-GCTGCGGTGTCC------------------T----------------------------------------------------------------GTCTCC------------CTCTCTGTA------CATTGATTAGATAA----GTAATTGTGAA-----------------------------------TTGTGCT-CT---------------------------------------------------------------------------------------------------------------------------------------------------ACCGCTC-TTTGCAGGCAACAACTGGGCCAAGGGCCACTACACAGAGGGCGCCGAACTGATCGAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACTGGGCCAAGGGC..............................1921.0020200000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTACACAGAGGGCGCCGAACT.......2321.0020200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGGCCACTACACAGAGGGCGC.............2420.5010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGAGGGCGCCGAACT.......1920.5010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGCGCCGAACTGATCG..1920.5010000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACACAGAGGGCGCCGAACT.......2220.5010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAACAACTGGGCCAAGGGCC.............................2220.5010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAGGGCGCCGAACTGATCG..2220.5010000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACTGGGCCAAGG................................1840.5020200000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTACACAGAGGGCGCCG...........1920.5010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGGCGCCGAACTGATCG..2020.5010000000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAACAACTGGGCCAAGG................................1940.2510100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACTGGGCCAAGGG...............................1840.2510100000000
droPer2
TCGGGCAG------TA--CGTTGCT---------------------CCTCATCCA-----------------GC---------------AGTTTGCTGTGTACTGATGATAATTGCAATTATGAAATTGCCTGCGGTTGACGATGAAAATTAATTTTCCACATGTCCACAGCTGT-----G----------CTGT-G------------CTGTGGTGTC------C------------------T----------------------------------------------------------------GTCTCC------------CTCTCTGTA------CATTGATTAGATAA----GTAATGGTGAA-----------------------------------TTGTGCT-CT---------------------------------------------------------------------------------------------------------------------------------------------------ACCGCTC-TTTGCAGGCAACAACTGGGCCAAGGGCCACTACACAGAGGGAGCCGAACTGATCGAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGGGAGCCGAACTGATCGA.2212.002200000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACTGGGCCAAGGGC..............................1912.002200000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGGAGCCGAACTGATCGA.2111.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACTGGGCCAAGGGT..............................1920.501010000
droWil2
-------------------------------------------------------------------------------------------------------TGATGATGATTGCAATTATAAAATGGCCTGCGGCTGACGATTAAAATTAATTTTGTACATGTCAGCTGGCAC-----------------------------------------------------------------------------------------------------TTGGCGAGTGTGTATCTGTGTGTGTATCTGTGTGTGTAT------------CTCTGTGTGTGTGTGTGTTGATTAGATAG----ACATTTGTAAAAGCCA----------------------------------------AATTTAA------------------------------------------------------------------AATTC--------------------------------------------------------CAATATCT----------TA-TTTACAGGCAACAACTGGGCCAAGGGTCATTATACAGAGGGTGCCGAATTAATCGATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTGGGCCAAGGGT..............................1825.001003160
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTGGGCCAAGGGTC.............................1922.00401030
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATACAGAGGGTGCCGAAT........2111.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACTGGGCCAAGGGTCATT..........................2311.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTGGGCCAAGGGTCATTATACA.....................2511.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGGGTCATTATACAGAGGGTGCC............2611.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGGCCAAGGGTCATTATACA.....................2311.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTATACAGAGGGTGCCGAAT........2211.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAGAGGGTGCCGAAT........1811.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGCCAAGGGTCATTATACAG....................2311.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACTGGGCCAAGGGTCATT..........................2411.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACTGGGCCAAGG................................1811.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACTGGGCCAAGGGTCATTATA.......................2611.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTGGGCCAAGGGTCATTA.........................2320.50100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTGGGCCAAGGGTCA............................2020.50100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTGGGCCAAGGGTCATT..........................2220.50100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGGGCCAAGGGTCATT..........................1920.50100010
droVir3
GCTGT----------AGCTGTTGCTGCCTGTGCTGGAGATGCGGC------------------------------------------TGTCCGGAT----TGTTGATGATAATTGCAATTATAAAATAGCCTGCGGATGACGATGAAAATTAATTTCGTACATGTCACTCATCACAACATGT-TG------------ATATTATTG---TCGTGGTT--------ATGAGTGTGTGTTT-TTCCCTG------TGCG---------------------------------------------TGTGCAGGTGTGCATGTGCAGGAGG---GA----AGTGTGTGCTGCTTAGTTAATTATGTTA----------------------------------------------------------------------------------------------------------------------TTGT-------ATATCTACTTGCACATAT---ATCCAGCAACTGACC---------------------TCACCTTT------CTGCTCTCCAACAGGCAACAACTGGGCCAAGGGCCACTACACAGAAGGCGCCGAGCTGATCGATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACTGACC---------------------TCACCTTT------CTGCTCC.........................................................2712.002002000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTACACAGAAGGCGCCGA..........2012.002002000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACTGGGCCAAGGGCCA............................2111.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................AATAGCCTGCGGATGACGATGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACTGGGCCAAGGGCCACT..........................2311.001000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACTGGGCCAAGGGC..............................1911.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGGGCCACTACACAGAA..................2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACAGAAGGCGCCGAGCTGATCGA.2611.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGAAGGCGCCGAGCT.......1811.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAAGGCGCCGAGCTGA.....1911.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCCAAGGGCCACTACACAGAAGGCGC.............2811.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACACAGAAGGCGCCGAG.........2011.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGAAGGCGCCGAGCTGAT....2211.001000000000000000000000000000000000000000000000000000000000000010
.....................................GATGCGGC------------------------------------------TGTCCGGAT----T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTGGGCCAAGGGCCA............................2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGCCAAGGGCCACTACACAG....................2311.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGGCCACTACACAGAAG.................2011.001000000000000000000000000000001000000000000000000000000000000000
droMoj3
GCTGTTG-------------------------CTGGGGACGTGGCTGCATGTC--------------------------------------CGGAT----TGTTGATGATAATTGCAATTATAAAATAGCCTGCGGATGACGATGAAAATTAATTTTGTACATGTCACTCAGCACAATGTGC-TGCTGTTAATGCTGTCATTGT------TGT--------------GCATGTGTCTTTATTAACTGCTCGCATGTG---------------------------------------------TGTGAGTGTGTGC------------CTCTGTGTGTGTGTGTGCTGATTAGATAAATATGTAA----------------------------------------------------------------------------------------------------------------------TTGTTATGCCTAT-------------------------------ACCTATTCATCTCTTCATCTGGC----TAT-TTATCTA---CCC-CGCACAGGCAACAACTGGGCCAAGGGACACTACACAGAGGGCGCCGAGCTGATCGATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGGCGCCGAGCTGATC...1921.002200000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGAGGGCGCCGAGCTGATC...2221.002100001
...............................................................................................................................................................................................................................................................................................................................................GTGTGTGTGCTGATTAGATAAAT..............................................................................................................................................................................................................................................................................2311.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGAGGGCGCCGAGCTGATC...2321.002000002
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAGGGCGCCGAGCTGATC...2121.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGGACACTACACAGAGGGCGCC............2511.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACAGAGGGCGCCGAGCTGATC...2420.501000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGGGACACTACACAGAGGG................2320.501000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACACAGAGGGCGCCGAGCTG......2320.501100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTGGGCCAAGGGACACTA.........................2120.501000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAGGGCGCCGAGCTGAT....2020.501100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAACAACTGGGCCAAGGGACA............................2320.501100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGAGGGCGCCGAGCTGATCGA.2520.501000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTGGGCCAAGGGAC.............................1920.501000001
droGri2
----------------------------------------------------------------------------------------------------TGTTAATGATAATTGTAATTATAGAATGGTCTGCGAATGAAGATGAAAATTAATTTTGTACATGTCAATCAACACAACATAT-TG------TTCT---------------TGT------------------------------------------------------------------------------------GTGTGCTTAAGGGGAGAT------------TCTGT----AGTCTGTGCTCATTTAATAAATATATAA----------------------------------------------------------------------------------------------------------------------TTGG-------AAAACTTCTGATGCATATTAGATCCA-CTGCTCACTTATGCA---------------------------------TC-TTTACAGGCAACAACTGGGCCAAGGGCCACTACACAGAGGGCGCCGAACTGATCGACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTGGGCCAAGGGCCACTA.........................2120.50110
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTGGGCCAAGGGCCACTA.........................2320.50110
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACTGGGCCAAGG................................1830.33110
droAna3
---------------------------------------------------------------------------------------------------------ATGATGATTGCAATTATAAAATGGCCTGCGGATGACGACGAAAATTAATTTTGTACATGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................ATAAAATGGCCTGCGGATGACGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
droBip1
A--------------------------------------------------------------------------------------------------------------------ATTATGAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTATTAA---TCT-TACTTAGGCAACAACTGGGCCAAGGGCCATTACACAGAAGGCGCCGAACTGATCGACSizeHit CountTotal NormTotal
No Reads
droKik1
-------------------------------------------------------------------------------------------------------TGAGGATGATTGTAATTATAGAATGGCCTGCGGATGACGATGAAAATTAATTTTGTACATGTCAGCGGCTGT-----GCA------TGATGTTGGTTAGTCCGCTGCTGTTG-------------------------------------ATTTGCCGCGAACTTTGATTTGCATTTC--------------------------------------------------------------------------------------CCAAGAGCCGAAGTCAAGCC-TGAAGGCAGCGGGAAATTAA----AGCCT-AATTAAATAAAGAGAATTTGAGATTTTAAC-------TAAATAATTTAATGTGGAATTTATGTCTTAGTT-----------------------------------------------------------ATATTAATTTCTCTT-A----CTT-TCCGCAGGCAACAACTGGGCCAAGGGCCACTACACAGAGGGCGCCGAGCTGATCGACSizeHit CountTotal NormTotal
No Reads
droFic1
GAGGGCAGCAATCTGA--ACTTGGG--------------------------TCCAACGCACTTC--GCACC-----------------GCTGCTGA----CGGTGATGATGACTGCAATTATGAAATGGCCTGCGGAGGCTGACGAAAATTAATTTTGTACATGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GCTGGCAG------GA--CCTTCCT---------------------CC---CCCTCCCCACATCACCCTCAGTTGCCAT--------TCATGCTGA----TGGTGATGATGATTGCAATTATAAAATGCCCTGCGGATGATGACGAAAATTAATTTTGTACATGTCAGCCGCTGC-----T---------GCTGCTT------------TTGCTACTGC------TG--------------TAATGACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CCT------------------------------------------------------------------CCGATGCCGT--------TGATGCTGA----TGGTAATGATGCTTGCAATTATAAAATGCCCTGCGGATAATGATGAAAATTAATTTTTCACATGTCAGCCGATGT-----G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
G--------------------------------------------------------------------------------------------------------ATGATGATTGCAATTATAAAATGGCCTGCGGATGACGACGAAAATTAATTTTGTACATGTCAGCCGCTGT-----T---------GATGTTGATGTTGC------TGCTGCCTC---------------------------------------------------TGTGTTCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
G--------------------------------------------------------------------------------------------------------ATGATGATTGCAATTATGAAATGGCCTGCGGATGACGACGAAAATTAATTTTGTACATGTCAGGCGCTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GCGGCCAG------GA--CCTCGC----------------------------AAGCCACACTTCATCCTCAGGTGCCAG--------GGAGGATGA----TGGCGTTGATGATTGCAATTATAAAATGGCCTGCGGATGATGATGAAAATTAATTTTGTACATGTCAGCCGTTGT-----T---------GCTTC---------------TGGGGCTGC------TG--------------TAATGACCCACAATAG-CGCGAATTTTGATTA------------------------------------------------------------------------------GCTTA----GAACAGG-AAC-----------------------------------ATGTGCT-TCAATTTAAGCAGAAATAGTT----------------------------------------------------AAGACTAA-----------------------------------------------------------ATCTT--------CTT-TTCGCAGGAAACAACTGGGCTAAGGGCCACTATACAGAGGGCGCTGAGCTGATTGATSizeHit CountTotal NormTotal
No Reads
dm3
GCGGTCAG------GA--CCTCCCG--------------------------GCCGGCCCACTTTATGCTCAGCTGCCATGAGGATAATGACCATGA----TGGCTATGATGATTGCAATTATAAAATGGCCTGCGGATGACGATGAAAATTAATTTTGTACATGTCAGACGCTGT-----T---------GC------------------TGTGGCCTC------AA--------------TAATGACCCACAAACGCCGCGAACTTCGATGAGTTTTGGCGGATGAGTA-------------------------------------------------------------GC-------ACACA------------------GC--------T--------A-TTATATGGT-CTAATTTAA-----------------GCTTAACATATATATGAATAGTTTAGT-----ATATATTACATTGTAA--------------------------------------------------------------TAACATCTTGT-T----TAT-ATCACAGGCAACAACTGGGCCAAGGGCCATTACACAGAGGGCGCCGAGCTGATCGATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGAGGGCGCCGAGCT.......1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000001000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTGGGCCAAGGGCCAT...........................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................ATGGCCTGCGGATGACGATGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGCGCCGAGCTGATCGA.2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................................................................................TTTGGCGGATGAGTA-------------------------------------------------------------GC-------ACACA------------------G....................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACAGAGGGCGCCGAGCT.......2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAACAACTGGGCCAAGGGCC.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAACAACTGGGCCAAGGGC..............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................................................................................................................................................TTTTGGCGGATGAGTA-------------------------------------------------------------GC-------A...........................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGAGGGCGCCGAGCTGATCG..2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGGCCATTACACAGAGGGCGCC............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGGGCGCCGAGCTGAT....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGAGGGCGCCGAGCTG......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................TATGATGATTGCAATTATAAAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACACAGAGGGCGCCGAG.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACAGAGGGCGCCGAGCTGATCGAT2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACAGAGGGCGCCGAGCTG......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................................................................................................................................................................GATGAGTTTTGGCGGATGAGTA-------------------------------------------------------------GC-------............................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..............................................................................TGAGGATAATGACCATGA----TGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGCGCCGAGCTGATC...1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................GGCCTGCGGATGACGATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGGGCCAAGGGCCATT..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGCCAAGGGCCATTACACAGA...................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTGGGCCAAGGGC..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATTACACAGAGGGCGCCGAG.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAGGGCGCCGAGCTGA.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGAGGGCGCCGAGCTGATCGA.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGAGGGCGCCGAGCTGATC...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTGGGCCAAGGGCC.............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACTGGGCCAAGG................................1841.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000020000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACACAGAGGGCGCCGAGCTGATCG..2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGGCCAAGGGCCATTACA.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGCCAAGGGCCATTACACAGAG..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACTGGGCCAAGGGC..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGAGGGCGCCGAGCTGATCG..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CGCGAACTTCGATGAGTTTTGGCG..........................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGGCGCCGAGCTGATC...1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACTGGGCCAAGGGCG.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGAGGGCGCCGAGCTGAT....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACACAGAGGGCGCCGAGC........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACTGGGCCAAGGG...............................1940.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCATTACACAGAGGGG...............1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAACAACTGGGCCAAGG................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAACAACTGGGCCAAG.................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GCGGTCAG------GA--CCTCCCG--------------------------GCCGGCCCACTTCATGCTCAGCTGCCATGAGGATAATGACTATGA----TGGCTATGATGATTGCAATTATAAAATGGCCTGCGGATGACGATGAAAATTAATTTTGTACATGTCAGGCGCTGT-----T---------GC------------------TGTGGCCTC------CA--------------TAATGACCCACAAACGCCGCGAACTTTGATGAGTTTTGGCG---GAGTA-------------------------------------------------------------GC-------ACACA------------------GC--------T--------A-TTATATGAT-CTAATTTAAGTACCGATAGCTTAGGAGCTTAACCTTTATATGAATAGTCTTCT-----ATGTACT-------------------------------------------------------------------ATAGTAACATCTTGT-T----TCT-ATCACAGGCAACAACTGGGCCAAGGGCCACTACACAGAGGGCGCCGAGCTGATCGACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTGGGCCAAGGGC..............................1812.00200200000000000000
....................................................................................................................................................................................................................................................................................TTGGCG---GAGTA-------------------------------------------------------------GC-------ACACA------------------GC--------T--------A-TTATA...........................................................................................................................................................................................................................2711.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACTGGGCCAAGGGC..............................1911.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTACACAGAGGGCGCCGAGCTG......2411.00101000000000000000
.............................................................................................................................................................................................................................................................................................GAGTA-------------------------------------------------------------GC-------ACACA------------------GC--------T--------A-TT..............................................................................................................................................................................................................................1811.00100000100000000000
............................................................................................................................AATGGCCTGCGGATGACGATGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
...................................................................................................................................................AATTAATTTTGTACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16140.07100000000010000000
droSec2
GCGGTCAG------GA--CCTCCCG--------------------------GCCGGCCCACTTCATGCTCAGCTGCCATGAGGATAATGACTATGA----TGGCTATGATGATTGCAATTATAAAATGGCCTGCGGATGACGATGAAAATTAATTTTGTACATGTCAGGCGCTGT-----T---------GC------------------TGTGGCCTC------CG--------------TAATGACCCACAAACGCCGCGAACTTTAATGAGTTTTGGCG---GAGTA-------------------------------------------------------------GC-------GCACA------------------GC--------T--------A-TTATATGAT-CTAATTTAAGTACCGATAGCTTAGGAGCTTAACATTTATATGAATATT-----------------GCATTA-----------------------------------------------------------------TAACATTTCGT-T----TAT-ATCACAGGAAACAACTGGGCCAAGGGCCACTACACAGAGGGCGCCGAGCTGATCGACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACAACTGGGCCAAGGGC..............................2012.0021010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTACACAGAGGGCGCC............1812.0020020
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTACACAGAGGGCGCCGAGCT.......2311.0011000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCACTACACAGAGGGCGCCG...........2211.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAACTGGGCCAAGGGCCA............................2111.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGGGCGCCGAGCTGATCG..2111.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGGCCACTACACAGAGGGC...............2111.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCACTACACAGAGGGCGCCGAGC........2511.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAACTGGGCCAAGGGC..............................1911.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGCGCCGAGCTGATCGA.2011.0010010
.........................................................................................................................................................................CGCTGT-----T---------GC------------------TGTGGCCTC------CG--------------...................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGGCGCCGAGCTGATCG..2011.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGAGGGCGCCGAGCT.......1911.0010010
............................................................................................................................................................................................................................................................................AATGAGTTTTGGCG---GAGTA-------------------------------------------------------------GC-------............................................................................................................................................................................................................................................................................2111.0010010
droYak3
---------------------------------------------------------------------------------------------------------ATGATGATTGCAATTATAAAATGGCCTGCGGATGACGACGAAAATTAATTTTGTACATGTCAGGCGCTGT-----T---------GC------------------TGCGGCTTC------CA--------------TAATGACCCACAATCGCCGGGAACTTTGATGAGTTTTGGCG---TGGTA-------------------------------------------------------------GC-------T--TA------------------GCTATGAAGCT--------A-TGAAGCTAT-CTAATTTAAAGACTAGGAGTTTAAAATCTTAAGATGTATTTGAATAGTCTTAT-----ATATATGTGATTGTAATT------------------------------------------------------CTATA----TATTTGGT-TA---AAC-ATTACAGGCAACAACTGGGCCAAGGGCCACTACACAGAGGGCGCCGAGCTGATCGACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACTGGGCCAAGGGC..............................1913.00301110000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACTGGGCCAAGGGC..............................2012.00200110000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGCGCCGAGCTGAT....1711.00100000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAGGGCGCCGAGCTGATC...2111.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTACACAGAGGGCGCCGA..........2011.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGAGGGCGCCGAGCTG......2011.00100001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACACAGAGGGCGCCGA..........1911.00101000000000
....................................................................................................................................................................................................................................................................................TTGGCG---TGGTA-------------------------------------------------------------GC-------T--TA------------------GCTATGAAGCT--------..................................................................................................................................................................................................................................2711.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAACAACTGGGCCAAGGGCCAC...........................2411.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTACACAGAGGGCGCCGAGCTGATCG..2811.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGGCCACTACACAGAGGGCGCC............2511.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTGGGCCAAGGGC..............................1811.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTACACAGAGGGCGCCGAGCT.......2311.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGGCGCCGAGCTGATCGA.2111.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAACAACTGGGCCAAGGGC..............................2111.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGGCCACTACACAGAGG.................2011.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAACAACTGGGCCAAGG................................1940.25101000000000
droEre2
C-----------------------G--------------------------GTCGGCCCACTTCATCCTCAG---------------TGACCATGA----TGGCTATGATGATTGCAATTATAAAATGGCCTGCGGATGACGACGAAAATTAATTTTGTACATGTCAGGCGCTGT-----G---------GCTGCGG------------CTGTGGCTTC------CG--------------TAATGACCCACAAACGCCGCGAACTTTGATGAGTTTTGGCT---TAGTA-------------------------------------------------------------GC-------A--TA------------------GC--------T--------G-TTAAGCGAT-CCAATTTAAAGACCGGCAGTTTGAGAGTTTAAGATGCATTTGAATAGTATTCT-----ATATATT-------------------------------------------------------------------ATA-------------------TA-TTCGCAGGCAACAACTGGGCCAAGGGCCACTACACAGAGGGCGCCGAGCTGATCGACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACTGGGCCAAGGGC..............................2011.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTACACAGAGGGCGCCGAGCTGAT....2611.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACACAGAGGGCGCCGAGCTGATCGAC2911.0010100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGGCCACTACACAGAGGGC...............2211.0010001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACACAGAGGGCGCCGAGC........2111.0010001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGGCCACTACACAGAG..................1911.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACTGGGCCAAGGGC..............................1911.0010100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAACAACTGGGCCAAGGGCCA............................2311.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTACACAGAGGGCGCCGAGCTGATC...2711.0010100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGGCCAAGGGCCACTACAC......................2211.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGCGCCGAGCTGATC...1811.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTGGGCCAAGGGC..............................1811.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTACACAGAGGGCGCCGAGCT.......2311.0010001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAGAGGGCGCCGAGCT.......1911.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGGCGCCGAGCTGATCGA.2111.0010100000

Generated: 05/17/2015 at 10:20 PM