ID:

dps_405

 Coordinate:

2:6930990-6931140 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.4 -18.3 -18.1

Flybase annnotation

exon [dpse_GLEANR_4265:2]; CDS [Dpse\GA18969-cds]; five_prime_UTR [Dpse\GA30066-u5]; CDS [Dpse\GA30066-cds]; intron [Dpse\GA18969-in]; exon [Dpse\GA30066:1]

No Repeatable elements found

Sense Strand Reads

###########################################################################################################################################################################################################################################################
CAAGGAACGATTGGAGAAGGCCATAAGTGGGTCAAACATCCAAAAGAAAGGCAGGTGTTCCTACATTGACGTATTAGTAACAGTATTAGCCGGTTGAAAGCACCGCAATGGGCAAAAAGAACAAGAAGAAGGCAACCGTATTGGCAGCGAAGCCAGTTCCAGCGGCCGATGATGTTTATGCGCAAGTTGCAGAGCGTCCCCGCCAGCAGTCGATAGATCGAAGCTTGGAGGTGTTTCTCTGGCTCGTGGTC
************************************************************************************************************((.(((....(((((.......(((......((((((......)))))).......))).....))))).))).))...........******************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 SRR902011
testis
 SRR902010
ovaries
 GSM343916
embryo
 M059
embryo
 SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................TGGAGGTGTTTCTCAGGTTGG..... 21 3 3 196.33 589 554 35 0 0 0 0 0
................................................................................................................................................................................................................................TTGGAGGTGTTTCTCAGGTTG...... 21 3 3 179.00 537 417 120 0 0 0 0 0
................................................................................................................................................................................................................................TTGGAGGTGTTTCTCAGGTT....... 20 2 1 47.00 47 44 3 0 0 0 0 0
..................................................................................................................................................................................................................................GGAGGTGTTTCTCAGGTTGGT.... 21 3 4 37.75 151 149 2 0 0 0 0 0
................................................................................................................................................................................................................................TTGGAGGTGTTTCTCAGGTTGG..... 22 3 1 36.00 36 29 7 0 0 0 0 0
...............................................................................................................................................................................................................................GTTGGAGGTGTTTCTCAGGTT....... 21 3 3 31.00 93 80 13 0 0 0 0 0
............................................................................................................TGGGCAAAAAGAACAAGAAGAAGGCA..................................................................................................................... 26 0 1 27.00 27 0 0 23 4 0 0 0
...............................................................................................................................................................................................................................GTTGGAGGTGTTTCTCAGG......... 19 2 2 18.50 37 34 3 0 0 0 0 0
.................................................................................................................................................................................................................................TGGAGGTGTTTCTCAGGTTG...... 20 3 9 16.67 150 132 18 0 0 0 0 0
.................................................................................................................................................................................................................................TGGAGGTGTTTCTCAGGTTGGT.... 22 3 2 9.50 19 15 4 0 0 0 0 0
.................................................................................................................................................................................................................................TGGAGGTGTTTCTCAGGTT....... 19 2 1 9.00 9 9 0 0 0 0 0 0
................................................................................................................................................................................................................................TTGGAGGTGTTTCTCAGGTTGGT.... 23 3 1 8.00 8 3 4 0 0 1 0 0
................................................................................................................................................................................................................................TTGGAGGTGTTTCTCAGGT........ 19 2 1 5.00 5 4 1 0 0 0 0 0
................................................................................................................................................................................................................................TTGGAGGTGTTTCTCAGG......... 18 1 1 5.00 5 5 0 0 0 0 0 0
............................................................................................................TGGGCAAAAAGAACAAGAAGAAGGCAA.................................................................................................................... 27 0 1 4.00 4 0 0 4 0 0 0 0
...................................................................................................................................................................................................................................GAGGTGTTTCTCAGGTTGGT.... 20 3 10 3.90 39 39 0 0 0 0 0 0
............................................................................................................TGGGCAAAAAGAACAAAAAGAAGGC...................................................................................................................... 25 1 1 3.00 3 0 0 3 0 0 0 0
............................................................................................................TGGGCAAAAAGAACAAGAAGAAGGC...................................................................................................................... 25 0 1 3.00 3 0 0 3 0 0 0 0
............................................................................................................TGGGCAAAAAGAACAAAAAGAAGGCAACC.................................................................................................................. 29 1 1 2.00 2 0 0 2 0 0 0 0
...........................................................................................................ATGGGCAAAAAGAACAAGAAGAAGGC...................................................................................................................... 26 0 1 2.00 2 0 0 2 0 0 0 0
...............................................................................................................................................................................................................................GTTGGAGGTGTTTCTCAGGT........ 20 3 10 1.80 18 17 1 0 0 0 0 0
..................................................................................................................................................................................................................................GGAGGTGTTTCTCAGGTT....... 18 2 3 1.67 5 5 0 0 0 0 0 0
.................................................................................................................................................................................................................................TGGAGGTGTTTCTCAGGT........ 18 2 4 1.25 5 5 0 0 0 0 0 0
.......................................................................................................................AACAAGAAGAAGGCAACCGTA............................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................TGGGCAAAAAGAACAAAAAGAAGGCAAC................................................................................................................... 28 1 1 1.00 1 0 0 1 0 0 0 0
................................................................................................................................................................................................................GTCGATAGATCGAAGCTTGGA...................... 21 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................TGGAGGTGTTTCTCTGGCTCGTGG.. 24 0 1 1.00 1 0 0 1 0 0 0 0
............................................................................................................TGGGCAAAAAGAACAAGAAGAAGGCAAC................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0
..............................GTCAAACATCCAAAAGAAA.......................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................TGGAGGTGTTTCTCAGGCTGG..... 21 2 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................ACAAAAAGAAGGCAACCGTATTGGC.......................................................................................................... 25 1 1 1.00 1 0 0 0 0 0 1 0
....................................................................................................................................................................................................................ATAGATCGAAGCTTGGAG..................... 18 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................TGGGCAAAAAGAACAAGAAGAAGG....................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0
...................................................................................................................................................................................................................GATAGATCGAAGCTTGGAG..................... 19 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................................TTGGAGGTGTTTCTCAGGCTG...... 21 2 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................................................................TTTATGCGCAAGTTGCAGAGC........................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................................................CAGTTCCAGCGGCCGATGATGTT........................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0
........GATTGGAGAAGGCCATAAGTGGA............................................................................................................................................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................................................CCAGCGGCCGATGATGACTTTGC...................................................................... 23 3 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GGTGTTTCTCTGGCTCGTGGTC 22 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GGGGTTTCTCTGGCTCGTGGT. 21 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................GCAGTCGATAGATCGAAGCTTGGAGG.................... 26 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................AATGGGCAAAAAGAACAAGAAGAAGG....................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................GGTTGGAGGTGTTTCTCAGG......... 20 2 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................................................................................................................CAGTCGATAGATCGAAGCTTGGAG..................... 24 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................GTGTTTCTCTGGCTCGTGGT. 20 0 1 1.00 1 0 0 0 0 1 0 0
....................................................................................................................................................................................................................ATAGATCGAAGCTTGGAGGTGT................. 22 0 1 1.00 1 0 0 0 0 1 0 0
.......................................................................................................................................................................................................................GATCGAAGCTTGGAGGTGTTTCTCTGG......... 27 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................................TTGGAGGTGTTTCTCAGGTTC...... 21 2 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................................GAAGGCAACCGTATTGGC.......................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 1
................................................................................................................................................................................................................................TTGGAGGTGTTTCTCAGGTTT...... 21 3 2 0.50 1 1 0 0 0 0 0 0
.........................................................................................................CATTGGGCAAAAAGAAAAAGA............................................................................................................................. 21 2 2 0.50 1 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................TGGAGGTGTTTCTCAGGTTT...... 20 3 6 0.50 3 3 0 0 0 0 0 0
.................................................................................................................................................................................................................................TGGAGGTGTTTCTCGGGTTGG..... 21 3 4 0.50 2 2 0 0 0 0 0 0
.........................................................................................................................................................................................GTTGATGAGCGTCCCCGC................................................ 18 2 3 0.33 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................TACATCGAAGCTCGGAGG.................... 18 2 3 0.33 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................AGGTGTTTCTCAGGTTGGTG... 20 3 6 0.33 2 2 0 0 0 0 0 0
..................................................................................................................................................................................................................................GGAGGTGTTTCTCAGGCTG...... 19 2 3 0.33 1 1 0 0 0 0 0 0
..................................................................................................................................................................................TGCTGAAGCTGCAGAGCGTCCC................................................... 22 3 4 0.25 1 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................GTTGGAGGTGTTTCTCAG.......... 18 2 4 0.25 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................................TTGGAGGCGTTTCTCAGGTT....... 20 3 8 0.13 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................GGAGGTGTTTCTCAGGGTGG..... 20 3 9 0.11 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................GTTGGAGGTGTTTCTGAGGC........ 20 3 15 0.07 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................TGGAGGTGTTTCTCAGGTC....... 19 3 16 0.06 1 1 0 0 0 0 0 0
.................................................................................................................AAAAAGGACAAGAAGAAG........................................................................................................................ 18 1 20 0.05 1 0 0 1 0 0 0 0
..................................................................................................................................................................................................................................GGAGGTGTTTCTCAGGTTT...... 19 3 20 0.05 1 1 0 0 0 0 0 0

Anti-sense strand reads

GTTCCTTGCTAACCTCTTCCGGTATTCACCCAGTTTGTAGGTTTTCTTTCCGTCCACAAGGATGTAACTGCATAATCATTGTCATAATCGGCCAACTTTCGTGGCGTTACCCGTTTTTCTTGTTCTTCTTCCGTTGGCATAACCGTCGCTTCGGTCAAGGTCGCCGGCTACTACAAATACGCGTTCAACGTCTCGCAGGGGCGGTCGTCAGCTATCTAGCTTCGAACCTCCACAAAGAGACCGAGCACCAG
********************************************************((.(((....(((((.......(((......((((((......)))))).......))).....))))).))).))...........************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 GSM444067
head
 GSM343916
embryo
...............................................................................................................................................................................................................................CAACCTCCACAAAGAGTCCAA....... 21 3 3 2.00 6 6 0 0 0
.................................................................................................................................................................................................................................ACCTCCACAAAGAGTCCAACC..... 21 3 3 1.33 4 2 2 0 0
..................................................................................................................................................................................................................................CCTCCACAAAGAGTCCAACCA.... 21 3 4 1.25 5 4 1 0 0
................................................................................................................................................................................................................................AACCTCCACAAAGAGTCCAAC...... 21 3 3 0.67 2 1 1 0 0
...................................................................................................................................................................................................................................CTCCACAAAGAGTCCAACCA.... 20 3 10 0.20 2 2 0 0 0
.....................................................................................................................................................TTAGGGCAAGGTCGCCGGCGA................................................................................. 21 3 6 0.17 1 1 0 0 0
....................................................................TGGATAAGGATTGTCATAAT................................................................................................................................................................... 20 3 6 0.17 1 0 0 1 0
...............................................................................................................................................................................................................................CAACCTCCACAAAGAGTCCA........ 20 3 10 0.10 1 1 0 0 0
.....................................................................................AATCGGCTAATTTTCGTGTC.................................................................................................................................................. 20 3 13 0.08 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:6930940-6931190 - dps_405 CAAGGAACGATTGGAGAAGGCCATAAGTGGGTCAAACATCCAAAAGAAAGGCAGGTGTT---CCTACATTGACGTA------------TTAGTAACAGTATTAGCCGGTTGAA----------------AGCACCGCAATGGGCAAAAAGAACAAG-----------------------AAG---AAGGCAAC---------------------C---GTATTGGCAGCGAAGCCAGTT-----CCAGCGGCCGATGAT---------------------GTTTATGCGC---AAGTTGCAGA---------------------GCGTCCCCGCCAGCAGTCGATAGATCGAAGCTTGGAGGTGTTTCTCTGGCTCGTGGTC
droPer2 scaffold_0:787321-787571 - CAAGGAACGATTGGAGAAGGCCATAAGTGGGTCAAACATCCAAAAGAAAGGCAGGTGTT---CCTACATTGACGTA------------TTAGTAACAGTATTAGCCGGTTGAA----------------AGCACCGCAATGGGCAAAAAGAACAAG-----------------------AAG---CAGGCAAC---------------------C---GTATTGGCAGCGGAGCCAGTT-----CCAGCGGCCGATGAT---------------------GTTGATGCGC---AAGTTGC---------------------AGAGCGTCCCCGCCAGCAGTCGATAGATCGAAGCTTGGAGGTGTTTCTCTGGCTCTTGGTC
droWil2 scf2_1100000004943:8565128-8565366 - dwi_3368 CAAGGAGAAACTGCAGCAAGCCCTTACTGGAGCACTCACCAAGGAAGAAGGCAGGTTT------------------------------------ACAGTATTAGCCGGTTAGA-AGAGTAATTGTCAAA--TA-TAGAATGGGCAAAAACAAAAAT-----------------------AAGAAACAGCAAGCAGAAAATTCCTTGTTGGAGAAGGAAAATGAG--------------------GTAGCAGACACTTA---------------------------------------------------------TGTCGCTCAGCCCC---AGCCACAAGCTGAGGACAATAGTTTTGAGGTATTTCTCTGGCTGCTGGCT
droVir3 scaffold_13047:1518707-1518993 + dvi_15103 TAAGGAGCGATTGCAACAGGCAATAAGCGGTGCAGAATACCAGAAGAAAGGCAGGTGCT---CTTACATAGACGTATCTGT---A---GTCCAAACAGTATTAGTGGCAGA-CATCTGTTAATTGCCAA--AA-GACAATGACCAAAAAGTCGAAAAGGCCATCTCCACCAGCTGTGGC---ACAAATAAAGT---------------------CGAGC----------------------------------------GTGCAGCTAATAAAGTCGGAAGTTACAACTG---AGGAAATGAA------------TTCAGCACAGCCTG---AAGAGCAATCGGTGGATAAGAGCTTAGAGGTTTTTCTCTGGCTAATGGCC
droMoj3 scaffold_6540:5612548-5612798 + CAAGGAGAAATTGCAACAGGCAATTAGCGGCTCAGAGCAGCAGAAGAAAGGCAGGTGCT---CAAATATAGACGTAGCTGT---A---GACCACACAGTATTAATTGGC---A-------------------------ATGGGCAAAAAGTCGAAA-----------------------AAGCAATCAGCGCT---------------------TGCCGTTGCC--------------------CCAGAGAGTTCAGCTGTGCAACCAGAAAAGT------------------CGGAAGTTGAGCC---------TAAGCCCGAGGCTG---AGCAACAATATGTGGACAAGAGCTTAGAGGTGTTTCTCTGGCTAATGGCA
droGri2 scaffold_14906:4715557-4715848 - CAAGGAGCGATTGCAGCAGGCAATAGGCGGTTCAGACATCCAAAAGAAAGGCAGGTGTTATTCTTACATTGACGTACCTGT---A---GTTCCAACAGTATTAGCAACAGC-CATCGGTTGAGTATTAAAGCA-CACAATGACCAAAAAGTCGAAA-----------------------AAGCAATCGACGCT---------------------GGCCGTGGAA---------CCAGTTACGCA--GTCTGCC------ATGGAACCAATAGTTT---------CGCAAG---CTG---A---ACTCAGTGAGGAACTTGAGGCACCGC---TGGAGCAATCGCTGGATAAGAGCCTCGAAGTGTTTCTCTGGCTGATGGCG
droAna3 scaffold_13340:23412070-23412299 + dan_3251 CGAGGAGAAACTGCAGCAGGCGATCAGCGGTGGAGGATTTGAGAAAAAAGGCAGGTTTA---C------------------CAAGGAATTAATAGCAGTATTAGCCAGCTGAT-------------------------ATGGGCAAACGTGGAAAG-----------------------AAG---CAACAGGT------------------TAAGGAGGTTGTG--------------------GCAGATACCGCCGAT---------------------TCTCCTCCA----CAACCACTTAAG--------------GCCCAGCGTA---GTCCCCAGGATGAGGACACCAGCGCTGAGGTGTTCTTGTGGCTGCTTGCC
droBip1 scf7180000396395:414331-414554 + CGAGGAGAAACTGAAAGAGGCGATCAGCGGTGCAGGATTTGAGAAAAAAGGCAGGTTTA---C------------------CAACAAATTATTAGCAGTATTAGCCAGCTGAT-------------------------ATGGGCAAGCGCGGAAAG-----------------------AAG---CAACAGGC------------------TAAGGAGGTTGTG--------------------GCAGAG---GAGGAT---------------------GCTCCTCAAG---CT---------CT---------TCCGGTTCAGCGTA---GTCCCCAAGAGGAGGACACCAGCGCTGAGGTGTTCTTGTGGCTGCTTGCC
droKik1 scf7180000300058:97103-97331 + TCAGGAGAAGCTACAGCAGGCTATCACCGGCTCCGGAATCCAGAAAAAAGGCAGGTTCA---C------------------CGAT---CCACTTGCAGTATTAGCCGGCTGAG-----------------------TTATGGCCAAAAAGAACAAG-----------------------AAGCTACAACAGGT---------------------GGAGGCTGTC--------------------GCAAATACGCCTGC------------------------------GAGCTTTGAGCCTGAACC---------TCCGGTAAAGTCCC---GTCCCCAAGAGGAGGACACTAGTGCCGAGGTGTTCCTATGGCTACTGGCT
droFic1 scf7180000453812:44767-44993 + TAAGGAGAAATTGCAGCAGGCGGTCAGTGGATCCGGGTTTCAGAAGAAAGGCAGGTTCA---C------------------CTTCTTTCAACTACCAGTATTAGTCGGCTGAG-------------------------ATGGGCAAGAAGAACAAA-----------------------AAC---AAGCAGCC---------------------TGAGACGGCA--------------------GCAGT------TGTT---------------------GAAAGTGAGC---CAGTGATTGAGCC---------TCCGGTGCAGCAAT---ATCCGCAGGAGGAAGACACCAGTGGCGAGGTCTTCCTGTGGCTGCTGGCC
droEle1 scf7180000490994:750720-750946 - CGAGGAGAAACTGCATCAGGTCATCGGTGAATCCGGCTACAAGAAGAAAGGCAGGTTCC---C------------------CTAT---CACCTACCAGTATTAGCCGGCTGAG-------------------------ATGGGCAAGAAGAACCGG-----------------------AGA---CAGCAAGC---------------------GGAGGCGGTG--------------------GCAGCTGCCATCGAT---------------------GATCCTCCGG---CTGTCGCTGA------------TCCGGTGCAGCATT---GTCCCCAGGAGGAGGACACCAGTACCGAGGTTTTCCTCTGGCTGCTGGCC
droRho1 scf7180000777405:91497-91723 + CCGGGAGAAACTGCAGCAGGCCATCGGGGAATCCGGTTATCAGAAGAAAGGCAGGTTTC---C------------------CTAT---CAACTAACAGTATTAGCGGGATAAG-------------------------ATGGGCAAGAAGAACAGG-----------------------AAA---CAGCAGAC---------------------GGAGACGGTG--------------------GCCGCTGTCATCGAT---------------------GAACCTCCGG---CACTCATTGA------------TCCGGTGGAGCACT---ATCCCCAGGAGGAGGACACCAGTACTGAGGTTTTCCTCTGGCTGCTGGCC
droBia1 scf7180000302402:746775-747013 - CCAGGAGAAACTACAAGCGGCAGTTGGAGACTCCGGATTCCAGACCAAAGGCAGGTTCA---TCTCCCT------------CCAG---CAACTAGCAGTATTAGCCGGCTGAC-------------------------ATGGGCAAGAAGAACAGG-----------------------AAA---CAGCAGGC---------------------CGAGGTGGTGGCG-----------------TCAGCTGCCATCGAT---------------------GATTCTGCAC---CAGAAGTTGATGC---------TCCGGTGGAGCAGT---ATCCCCCGGAGGAGGACACCAGCACCGAGGTCTTCCTCTGGCTGCTGGCC
droTak1 scf7180000410451:8105-8331 - CCAGGAGAAGCTGCAGCAGGCGGTCAGTGGAGCCGGAATCCAGAAGAAAGGCAGGTTCC---CTACCACCCACCCACA---ACAA---CAACTAGCAGTATTAGCCGGCTGAG-------------------------ATGGGCAAGAAGAAGCAG-----------------------CAGAAACAACAAAC--------------------------------------------------------------TGAT---------------------GCTGCTCCAG---TAGAGGTTGCTCC---------TCCGGTGGAACAGC---ATCCCCAGGAGGAGGACACCAGCACCGAGGTCTTCCTCTGGCTGCTGGCC
droEug1 scf7180000409804:1235461-1235686 - CCAGGGAAAACTACTGGAAGCAGTCAGTGGATCCGGATACAAGAAAAAAGGCAGGTTCA---T-------------------------CTATTAAGAGTATTTGCCCGATACG-------------------------ATGGGCAAGAAGAATAAG-----------------------AAA---CAGTCTGC---------------------GGAATTCGTG--------------------GCACCTGCTATCGAT---------------------GATTCTTCAG---AAGTAATTGATCC---------TCCCGTGGAGCATT---ATCCCCAGGAGGAGGACACCAGTGCCGAAGTGTTTCTCTGGCTGCTAGCT
dm3 chr3R:14987329-14987561 - CAAGGATCGACTGCTAAATTCCATCAGAGATTTCGGTGTCCAGCGAAAAGGCAGGTTAT---C------------------ACAC---CGATTACCAGTATTAGCCGGCTGAG-------------------------ATGGGCAAGAAGAACAGG-----------------------AAACAACAGCATGT---------------------CGATGTGGTG--------------------CCAGCTACCACTGAT---------------------GATTCCCCGG---CTGTCATTGATTC---------TCCCGTGGAGCATC---ATACGCAGCAGGAGGACACCAGTGCGGAGGTCTTCCTCTGGCTGTTGGCC
droSim2 3r:6270684-6270919 + dsi_24349 CAAGGATCGCTTGCTGAATTCCATCGGAGATTTCGGGGTGCAGCGGAAAGGCAGGTTAT---C------------------CCAA---CGATTACCAGTATTAGCCGGCTGAG-------------------------ATGGGCAAGAAGAACAGG-----------------------AAACAACAGCAGGT---------------------CGATGTGGTGGCA-----------------TCAGCTGCCACTGAT---------------------GATTCCCCGG---CTGTCATTGATTC---------TCCCGCGGAGCATC---ATACGCAGCCGGAGGACACCAGTGCGGAGGTCTTCCTCTGGCTGCTGGCC
droSec2 scaffold_25:773046-773281 + CAAGGAGCGCTTGCTGAATTCCATCGGAGATTTCGGGGTCAAGCGGAAAGGCAGGTTAT---C------------------CGAA---CGATTACCAGTATTAGCCGGCTGAG-------------------------ATGGGCAAGAAGAACAAG-----------------------AAACAACAGCAGGT---------------------CGATGTGGTGTCA-----------------TCAGCTGCCACTGAT---------------------GATTCCGCGG---CTGTCATTGATTC---------TCCCGTGGAGCATC---ATACGCAGCCGGAGGACACCAGTGCGGAGGTCTTCCTCTGGCTGCTGGCC
droYak3 3R:3668914-3669143 - CAAGGAGCGACTGCTGAAGTTAATCAGTGATTCCGGATTCCAGAAGAAAGGCAGGTTAA---C------------------CCAC---CAATTACCAGTATTAGGAGGTTGAG-------------------------ATGGGCAAGAAAAACAAG-----------------------AAA---CAACAGGT---------------------CGATGTGGTG--------------------ACAGCTGCCAGTGAT---------------------GATTCCCTGG---CTGTCATTGATCC---------TCCCGTGGAGCATC---ATACTCAGCAGGAGGACACTAGTGCGGAGGTCTTCCTATGGCTGCTGGCC
droEre2 scaffold_4770:6640988-6641217 + CAAGGAGCGACTGCTGAAGTCAATCAGTGATTCTGGACTCCAGAGTAAAGGCAGGTTAC---C------------------CCAA---CAATTACTAGTATTAGCCGGTTGAG-------------------------ATGGGCAAGAAGAACAAG-----------------------AAA---CAGCAGGT---------------------CGATGTGGTG--------------------GCAGCTGCCAGTGAT---------------------GATTCCCCGG---CTGCCATTGATCC---------TCCCGTGGAGAATT---ATACTCAGGAGGAAGACACCAGCGCGGAGGTCTTCCTCTGGCTGCTGGCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CAAGGAACGATTGGAGAAGGCCATAAGTGGGTCAAACATCCAAAAGAAAGGCAGGTGTT---CCTACATTGACGTA------------TTAGTAACAGTATTAGCCGGTTGAA----------------AGCACCGCAATGGGCAAAAAGAACAAG-----------------------AAG---AAGGCAAC---------------------C---GTATTGGCAGCGAAGCCAGTT-----CCAGCGGCCGATGAT---------------------GTTTATGCGC---AAGTTGCAGA---------------------GCGTCCCCGCCAGCAGTCGATAGATCGAAGCTTGGAGGTGTTTCTCTGGCTCGTGGTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................TGGGCAAAAAGAACAAG-----------------------AAG---AAGGCA...............................................................................................................................................................................................26127.002700000004230
...........................................................................................................................................TGGGCAAAAAGAACAAG-----------------------AAG---AAGGCAA..............................................................................................................................................................................................2714.0040000000040
...........................................................................................................................................TGGGCAAAAAGAACAAG-----------------------AAG---AAGGC................................................................................................................................................................................................2513.0030000000030
..........................................................................................................................................ATGGGCAAAAAGAACAAG-----------------------AAG---AAGGC................................................................................................................................................................................................2612.0020000000020
......................................................................................................................................................AACAAG-----------------------AAG---AAGGCAAC---------------------C---GTA.................................................................................................................................................................2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................GTCGATAGATCGAAGCTTGGA......................2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................TGGAGGTGTTTCTCTGGCTCGTGG..2411.0010000000010
...........................................................................................................................................TGGGCAAAAAGAACAAG-----------------------AAG---AAGGCAAC---------------------........................................................................................................................................................................2811.0010000000010
..............................GTCAAACATCCAAAAGAAA.............................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................ATAGATCGAAGCTTGGAG.....................1811.0010100000000
...........................................................................................................................................TGGGCAAAAAGAACAAG-----------------------AAG---AAGG.................................................................................................................................................................................................2411.0010000000010
......................................................................................................................................................................................................................................................................................................................................................GATAGATCGAAGCTTGGAG.....................1911.0010100000000
.........................................................................................................................................................................................................................................................................................TTTATGCGC---AAGTTGCAGA---------------------GC........................................................2111.0010100000000
..........................................................................................................................................................................................................................................CAGTT-----CCAGCGGCCGATGAT---------------------GTT...................................................................................................2311.0010000001000
........GATTGGAGAAGGCCATAAGTGGA...............................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................GGTGTTTCTCTGGCTCGTGGTC2211.0010100000000
................................................................................................................................................................................................................................................................................................................................................GCAGTCGATAGATCGAAGCTTGGAGG....................2611.0010100000000
.........................................................................................................................................AATGGGCAAAAAGAACAAG-----------------------AAG---AAGG.................................................................................................................................................................................................2611.0010000000010
.................................................................................................................................................................................................................................................................................................................................................CAGTCGATAGATCGAAGCTTGGAG.....................2411.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................GTGTTTCTCTGGCTCGTGGT.2011.0010000100000
.......................................................................................................................................................................................................................................................................................................................................................ATAGATCGAAGCTTGGAGGTGT.................2211.0010000100000
..........................................................................................................................................................................................................................................................................................................................................................GATCGAAGCTTGGAGGTGTTTCTCTGG.........2711.0010100000000
.....................................................................................................................................................................................G---AAGGCAAC---------------------C---GTATTGGC............................................................................................................................................................1811.0010000000001
droPer2
CAAGGAACGATTGGAGAAGGCCATAAGTGGGTCAAACATCCAAAAGAAAGGCAGGTGTT---CCTACATTGACGTA------------TTAGTAACAGTATTAGCCGGTTGAA----------------AGCACCGCAATGGGCAAAAAGAACAAG-----------------------AAG---CAGGCAAC---------------------C---GTATTGGCAGCGGAGCCAGTT-----CCAGCGGCCGATGAT---------------------GTTGATGCGC---AAGTTGC---------------------AGAGCGTCCCCGCCAGCAGTCGATAGATCGAAGCTTGGAGGTGTTTCTCTGGCTCTTGGTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................GATAGATCGAAGCTTGGAGGTGTTT...............2513.003300000
.........................................................................................................................................AATGGGCAAAAAGAACAAG-----------------------AAG---CAGG.................................................................................................................................................................................................2612.002200000
........................................................................................................................................................................................................................................................................................................................................................................GGTGTTTCTCTGGCTCTTGGTC2212.002200000
......................................................................................................................................................................................................................................................................................................................................................GATAGATCGAAGCTTGGAGGT...................2112.002100001
.........................................................................................................................................................................................................................................................................................................................................................AGATCGAAGCTTGGAGGT...................1811.001100000
.........................................................................................................................................................................................................................................................................................................................................................................GTGTTTCTCTGGCTCTTGGTA2111.001001000
.................................................................................................................................................................................................................................................................AT---------------------GTTGATGCGC---AAGTTGC---------------------AGAGC........................................................2411.001001000
.......................................................................................................................................................................................................................................................................................................................................................ATAGATCGAAGCTTGGAGGT...................2011.001000001
droWil2
CAAGGAGAAACTGCAGCAAGCCCTTACTGGAGCACTCACCAAGGAAGAAGGCAGGTTT------------------------------------ACAGTATTAGCCGGTTAGA-AGAGTAATTGTCAAA--TA-TAGAATGGGCAAAAACAAAAAT-----------------------AAGAAACAGCAAGCAGAAAATTCCTTGTTGGAGAAGGAAAATGAG--------------------GTAGCAGACACTTA---------------------------------------------------------TGTCGCTCAGCCCC---AGCCACAAGCTGAGGACAATAGTTTTGAGGTATTTCTCTGGCTGCTGGCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................A--TA-TAGAATGGGCAAAAACAAAAAT-----------------------...........................................................................................................................................................................................................2511.00100010
...............................................................................................................................AA--TA-TAGAATGGGCAAAAACAAAA....................................................................................................................................................................................................................................2411.00100010
.........................................................T------------------------------------ACAGTATTAGCCGGTTAGA-AGA.........................................................................................................................................................................................................................................................................2311.00100010
........................................................TT------------------------------------ACAGTATTAGCCGGTTAGA-AGA.........................................................................................................................................................................................................................................................................2411.00100010
....................................................................................................................................................................................................................................................................................................................................................GCTGAGGACAATAGTTTTGAGG....................2211.00100010
...................................................................................................................................TA-TAGAATGGGCAAAAACAAAA....................................................................................................................................................................................................................................2211.00100001
................................................................................................AGTATTAGCCGGTTAGA-AG..........................................................................................................................................................................................................................................................................1911.00100010
.....................................ACCAAGGAAGAAGGCAGG.......................................................................................................................................................................................................................................................................................................................................1811.00100010
...................................................................................................................GAGTAATTGTCAAA--TA-TAGA....................................................................................................................................................................................................................................................2011.00100010
...................................................................................................ATTAGCCGGTTAGA-AGAGTAATTGT.................................................................................................................................................................................................................................................................2511.00100010
..............AGCAAGCCCTTACTGGAGCA............................................................................................................................................................................................................................................................................................................................................................2011.00100010
.................................................................................................GTATTAGCCGGTTAGA-AGAGTAATT...................................................................................................................................................................................................................................................................2511.00100010
droVir3
TAAGGAGCGATTGCAACAGGCAATAAGCGGTGCAGAATACCAGAAGAAAGGCAGGTGCT---CTTACATAGACGTATCTGT---A---GTCCAAACAGTATTAGTGGCAGA-CATCTGTTAATTGCCAA--AA-GACAATGACCAAAAAGTCGAAAAGGCCATCTCCACCAGCTGTGGC---ACAAATAAAGT---------------------CGAGC----------------------------------------GTGCAGCTAATAAAGTCGGAAGTTACAACTG---AGGAAATGAA------------TTCAGCACAGCCTG---AAGAGCAATCGGTGGATAAGAGCTTAGAGGTTTTTCTCTGGCTAATGGCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................ATGACCAAAAAGTCGAAAAGGC..............................................................................................................................................................................................................................2211.001000000001000000000000000000000000000000000000000000000000000000
...............................................................................................................................AA--AA-GACAATGACCAAAAAGT.......................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
........GATTGCAACAGGCAATAAGCGG................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................ACAAATAAAGT---------------------CGAGC----------------------------------------GTGCAG.....................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GCACAGCCTG---AAGAGCAATCGGTG....................................2411.001000000000000001000000000000000000000000000000000000000000000000
........................................................GCT---CTTACATAGACGTATCTGT---A---GTC...................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................TTACAACTG---AGGAAATGAA------------TTCA...............................................................2311.001000000000001000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................AGCACAGCCTG---AAGAGCAATC........................................2111.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................GTTTTTCTCTGGCTAATGGC.2011.001001000000000000000000000000000000000000000000000000000000000000
........................................................GCT---CTTACATAGACGTATCT...............................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................ATTAGTGGCAGA-CATCTGTTAAT...................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
CAAGGAGAAATTGCAACAGGCAATTAGCGGCTCAGAGCAGCAGAAGAAAGGCAGGTGCT---CAAATATAGACGTAGCTGT---A---GACCACACAGTATTAATTGGC---A-------------------------ATGGGCAAAAAGTCGAAA-----------------------AAGCAATCAGCGCT---------------------TGCCGTTGCC--------------------CCAGAGAGTTCAGCTGTGCAACCAGAAAAGT------------------CGGAAGTTGAGCC---------TAAGCCCGAGGCTG---AGCAACAATATGTGGACAAGAGCTTAGAGGTGTTTCTCTGGCTAATGGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................................................................................................AACAATATGTGGACAAGAGCTTAGA......................2511.001100000
..................................................................TATAGACGTAGCTGT---A---GACCACACAGTA..........................................................................................................................................................................................................................................................................................2811.001000001
........................................................................................................................................................................................................................................................................................................................................................................GGTGTTTCTCTGGCTAATGGC.2111.001100000
................................................................................................................................................................................................................................................................................................................................................ACAATATGTGGACAAGAG............................1811.001100000
.........................................................................................................................................................................................................................................................................................................................................................................GTGTTTCTCTGGCTAATGGC.2011.001100000
.......................................................................................................................................................................................................................................................................................................................................................GTGGACAAGAGCTTAGAG.....................1811.001000001
droGri2
CAAGGAGCGATTGCAGCAGGCAATAGGCGGTTCAGACATCCAAAAGAAAGGCAGGTGTTATTCTTACATTGACGTACCTGT---A---GTTCCAACAGTATTAGCAACAGC-CATCGGTTGAGTATTAAAGCA-CACAATGACCAAAAAGTCGAAA-----------------------AAGCAATCGACGCT---------------------GGCCGTGGAA---------CCAGTTACGCA--GTCTGCC------ATGGAACCAATAGTTT---------CGCAAG---CTG---A---ACTCAGTGAGGAACTTGAGGCACCGC---TGGAGCAATCGCTGGATAAGAGCCTCGAAGTGTTTCTCTGGCTGATGGCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................................................................................................................................................................................................................................AGAGCCTCGAAGTGTTTCTCTGGCTG......2611.00110
droAna3
CGAGGAGAAACTGCAGCAGGCGATCAGCGGTGGAGGATTTGAGAAAAAAGGCAGGTTTA---C------------------CAAGGAATTAATAGCAGTATTAGCCAGCTGAT-------------------------ATGGGCAAACGTGGAAAG-----------------------AAG---CAACAGGT------------------TAAGGAGGTTGTG--------------------GCAGATACCGCCGAT---------------------TCTCCTCCA----CAACCACTTAAG--------------GCCCAGCGTA---GTCCCCAGGATGAGGACACCAGCGCTGAGGTGTTCTTGTGGCTGCTTGCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................GTA---GTCCCCAGGATGAGGA..................................1913.003100002
..............................................................................................................GAT-------------------------ATGGGCAAACGTGGAAAG-----------------------...........................................................................................................................................................................................................2111.001000010
.......................................................................................................................................................................................................................................................GATACCGCCGAT---------------------TCTCCT................................................................................................1811.001010000
.......AAACTGCAGCAGGCGATCAGCGGTGGA............................................................................................................................................................................................................................................................................................................................................................2711.001100000
.....................................................................................................................................................................................................................................................CAGATACCGCCGAT---------------------TCTCCTCCA----CAA......................................................................................2611.001010000
........................................................................................................................................................................................................................................................ATACCGCCGAT---------------------TCTCCTCCA----CAAC.....................................................................................2411.001010000
........................................GAGAAAAAAGGCAGGTTTA---C------------------CAAG.........................................................................................................................................................................................................................................................................................................2411.001001000
...............................................................................................................................................................................................GT------------------TAAGGAGGTTGTG--------------------GCAGATACCGCC..............................................................................................................................2711.001000010
.........................................................TA---C------------------CAAGGAATTAATAGCAGT...........................................................................................................................................................................................................................................................................................2111.001010000
.......................................................................................................................................................................................................................................................GATACCGCCGAT---------------------TCTCCTCCA----C........................................................................................2211.001010000
............................................AAAAAGGCAGGTTTA---C------------------CAAGGA.......................................................................................................................................................................................................................................................................................................2211.001010000
.............................................................................................................................................................................................................................................................................................................................................TCCCCAGGATGAGGACACCAGCG..........................2311.001100000
.............................................................................................................TGAT-------------------------ATGGGCAAACGTGGAAAG-----------------------A..........................................................................................................................................................................................................2311.001000010
.........................................................................................................................................................AAG-----------------------AAG---CAACAGGT------------------TAAGGAGGTT.................................................................................................................................................................2411.001000010
......................................................................................................................................................................................................................................................................................................................................GTA---GTCCCCAGGATGAGGACACCAGC...........................2611.001100000
droBip1
CGAGGAGAAACTGAAAGAGGCGATCAGCGGTGCAGGATTTGAGAAAAAAGGCAGGTTTA---C------------------CAACAAATTATTAGCAGTATTAGCCAGCTGAT-------------------------ATGGGCAAGCGCGGAAAG-----------------------AAG---CAACAGGC------------------TAAGGAGGTTGTG--------------------GCAGAG---GAGGAT---------------------GCTCCTCAAG---CT---------CT---------TCCGGTTCAGCGTA---GTCCCCAAGAGGAGGACACCAGCGCTGAGGTGTTCTTGTGGCTGCTTGCCSizeHit CountTotal NormTotal
No Reads
droKik1
TCAGGAGAAGCTACAGCAGGCTATCACCGGCTCCGGAATCCAGAAAAAAGGCAGGTTCA---C------------------CGAT---CCACTTGCAGTATTAGCCGGCTGAG-----------------------TTATGGCCAAAAAGAACAAG-----------------------AAGCTACAACAGGT---------------------GGAGGCTGTC--------------------GCAAATACGCCTGC------------------------------GAGCTTTGAGCCTGAACC---------TCCGGTAAAGTCCC---GTCCCCAAGAGGAGGACACTAGTGCCGAGGTGTTCCTATGGCTACTGGCTSizeHit CountTotal NormTotal
No Reads
droFic1
TAAGGAGAAATTGCAGCAGGCGGTCAGTGGATCCGGGTTTCAGAAGAAAGGCAGGTTCA---C------------------CTTCTTTCAACTACCAGTATTAGTCGGCTGAG-------------------------ATGGGCAAGAAGAACAAA-----------------------AAC---AAGCAGCC---------------------TGAGACGGCA--------------------GCAGT------TGTT---------------------GAAAGTGAGC---CAGTGATTGAGCC---------TCCGGTGCAGCAAT---ATCCGCAGGAGGAAGACACCAGTGGCGAGGTCTTCCTGTGGCTGCTGGCCSizeHit CountTotal NormTotal
No Reads
droEle1
CGAGGAGAAACTGCATCAGGTCATCGGTGAATCCGGCTACAAGAAGAAAGGCAGGTTCC---C------------------CTAT---CACCTACCAGTATTAGCCGGCTGAG-------------------------ATGGGCAAGAAGAACCGG-----------------------AGA---CAGCAAGC---------------------GGAGGCGGTG--------------------GCAGCTGCCATCGAT---------------------GATCCTCCGG---CTGTCGCTGA------------TCCGGTGCAGCATT---GTCCCCAGGAGGAGGACACCAGTACCGAGGTTTTCCTCTGGCTGCTGGCCSizeHit CountTotal NormTotal
No Reads
droRho1
CCGGGAGAAACTGCAGCAGGCCATCGGGGAATCCGGTTATCAGAAGAAAGGCAGGTTTC---C------------------CTAT---CAACTAACAGTATTAGCGGGATAAG-------------------------ATGGGCAAGAAGAACAGG-----------------------AAA---CAGCAGAC---------------------GGAGACGGTG--------------------GCCGCTGTCATCGAT---------------------GAACCTCCGG---CACTCATTGA------------TCCGGTGGAGCACT---ATCCCCAGGAGGAGGACACCAGTACTGAGGTTTTCCTCTGGCTGCTGGCCSizeHit CountTotal NormTotal
No Reads
droBia1
CCAGGAGAAACTACAAGCGGCAGTTGGAGACTCCGGATTCCAGACCAAAGGCAGGTTCA---TCTCCCT------------CCAG---CAACTAGCAGTATTAGCCGGCTGAC-------------------------ATGGGCAAGAAGAACAGG-----------------------AAA---CAGCAGGC---------------------CGAGGTGGTGGCG-----------------TCAGCTGCCATCGAT---------------------GATTCTGCAC---CAGAAGTTGATGC---------TCCGGTGGAGCAGT---ATCCCCCGGAGGAGGACACCAGCACCGAGGTCTTCCTCTGGCTGCTGGCCSizeHit CountTotal NormTotal
No Reads
droTak1
CCAGGAGAAGCTGCAGCAGGCGGTCAGTGGAGCCGGAATCCAGAAGAAAGGCAGGTTCC---CTACCACCCACCCACA---ACAA---CAACTAGCAGTATTAGCCGGCTGAG-------------------------ATGGGCAAGAAGAAGCAG-----------------------CAGAAACAACAAAC--------------------------------------------------------------TGAT---------------------GCTGCTCCAG---TAGAGGTTGCTCC---------TCCGGTGGAACAGC---ATCCCCAGGAGGAGGACACCAGCACCGAGGTCTTCCTCTGGCTGCTGGCCSizeHit CountTotal NormTotal
No Reads
droEug1
CCAGGGAAAACTACTGGAAGCAGTCAGTGGATCCGGATACAAGAAAAAAGGCAGGTTCA---T-------------------------CTATTAAGAGTATTTGCCCGATACG-------------------------ATGGGCAAGAAGAATAAG-----------------------AAA---CAGTCTGC---------------------GGAATTCGTG--------------------GCACCTGCTATCGAT---------------------GATTCTTCAG---AAGTAATTGATCC---------TCCCGTGGAGCATT---ATCCCCAGGAGGAGGACACCAGTGCCGAAGTGTTTCTCTGGCTGCTAGCTSizeHit CountTotal NormTotal
No Reads
dm3
CAAGGATCGACTGCTAAATTCCATCAGAGATTTCGGTGTCCAGCGAAAAGGCAGGTTAT---C------------------ACAC---CGATTACCAGTATTAGCCGGCTGAG-------------------------ATGGGCAAGAAGAACAGG-----------------------AAACAACAGCATGT---------------------CGATGTGGTG--------------------CCAGCTACCACTGAT---------------------GATTCCCCGG---CTGTCATTGATTC---------TCCCGTGGAGCATC---ATACGCAGCAGGAGGACACCAGTGCGGAGGTCTTCCTCTGGCTGTTGGCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......TCGACTGCTAAATTCCATCAGAGATT..............................................................................................................................................................................................................................................................................................................................................................2619.0090000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010300000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AACAACAGCATGT---------------------CGATGTGGTG--------------------CCAGC.....................................................................................................................................2817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................ACAGCATGT---------------------CGATGTGGTG--------------------CCAGCTG...................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GCTGAG-------------------------ATGGGCAAGAAGAACAGG-----------------------AAAC.......................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................ATC---ATACGCAGCAGGAGGACAC...............................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TATTAGCCGGCTGAG-------------------------ATGGGCAA............................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ATCGACTGCTAAATTCCATCAGAGA................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TCGACTGCTAAATTCCATCAGAGAT...............................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GAAAAGGCAGGTTAT---C------------------ACAA---A.....................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000000000000000000
...................................................................................................ATTAGCCGGCTGAG-------------------------ATGGGCAAGA..........................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................CACTGAT---------------------GATTCCCCGG---CTGT.....................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................ATTGATTC---------TCCCGTGGAGCATC---..................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TGGAGCATC---ATACGCAGCAGGAGG...................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010000000000000000
......................................................................................................AGCCGGCTGAG-------------------------ATGGGCAAGAAGAAC.....................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TGTCATTGATTC---------TCCCGTGGA..........................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TACGCAGCAGGAGGACACCAGTG..........................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................AC---CGATTACCAGTATTAGCC....................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................CAGCATGT---------------------CGATGTGGTG--------------------CCAGCT....................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................G-------------------------ATGGGCAAGAAGAACAGG-----------------------AA.........................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGGATCGACTGCTAAATTCCATC.....................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................AGCATGT---------------------CGATGTGGTG--------------------CCAGC.....................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................................................................TACCAGTATTAGCCGGCTGAG-------------------------ATGGGC..............................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................CAACAGCATGT---------------------CGATGTGGTG--------------------C.........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................TAGCCGGCTGAG-------------------------ATGGGCAAGAAGAAC.....................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................GCCGGCTGAG-------------------------ATGGGCAAGAAGAA......................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TATTAGCCGGCTGAG-------------------------ATGGGCA.............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................GCCGGCTGAG-------------------------ATGGGCAAGAAGAACA....................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TGAG-------------------------ATGGGCAAGAAGAACAGG-----------------------AAACA......................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TTC---------TCCCGTGGAGCATC---ATACGCAGC.........................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............TAAATTCCATCAGAGATTTCGGTGT.......................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AGCCGGCTGAG-------------------------ATGGGCAAGAA.........................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TTCGGTGTCCAGCGAAAAGGCAGGTTA....................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................CCGGCTGAG-------------------------ATGGGCAAGAAGAACAGG-----------------------...........................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..............................................................................................................................................................................................................................................................................................CCGG---CTGTCATTGATTC---------TCCC...............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................G-----------------------AAACAACAGCATGT---------------------CGA.....................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................................................................................ATTAGCCGGCTGAG-------------------------ATGG................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TCCCGTGGAGCATC---ATACGCAGCC........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATCAGAGATTTCGGTGTCC.....................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................AG-------------------------ATGGGCAAGAAGAACAGG-----------------------AAACAAC....................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................CAGGAGGACACCAGTGCGG.......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATTTCGGTGTCCAGCGAAAAGGCAGGT......................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................AGCATGT---------------------CGATGTGGTG--------------------CC........................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GATTC---------TCCCGTGGAGCAT......................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................AAACAACAGCATGT---------------------CGATGTGGTG--------------------CCC.......................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................GGCTGAG-------------------------ATGGGCAAGAAGA.......................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................GCAGCAGGAGGACACCAGTGC.........................2111.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................T---C------------------ACAC---CGATTACCAGTATTAGC.....................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................ATTGATTC---------TCCCGTGGAGC........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................AAAGGCAGGTTAT---C------------------ACAC---CG....................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TAGCCGGCTGAG-------------------------ATGGGCAAG...........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................TTCCCCGG---CTGTCATTGATTC---------TCCCGT.............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................GAAAAGGCAGGTTAT---C------------------ACAA---AA....................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
.AAGGATCGACTGCTAAATTCC........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................GCATGT---------------------CGATGTGGTG--------------------CCA.......................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................TATTAGCCGGCTGAG-------------------------ATGG................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TGTCATTGATTC---------TCCCGTGGAGCA.......................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................TAGCCGGCTGAG-------------------------ATGGGCAAGAA.........................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................CCGGCTGAG-------------------------ATGGGCAAGAAGAACAGG-----------------------A..........................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CGTGGAGCATC---ATACGCAGCAGGAG....................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...........................................................................................................................................................................................................................................................................................TCCCCGG---CTGTCATTGATTC---------TCCCGTGGAG.........................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TAAATTCCATCAGAGATTTCG...........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................AGGAGGACACCAGTGCGGAG.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................T---------------------CGATGTGGTG--------------------CCAGCTACCACT..............................................................................................................................2311.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................ATC---ATACGCAGCAGGAGGACA................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................AAACAACAGCATGT---------------------CGATGTGGTG--------------------CCA.......................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................C---ATACGCAGCAGGAGGACACCAGTGC.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................ATTAGCCGGCTGAG-------------------------ATGGGC..............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GCTGAG-------------------------ATGGGCAAGAAGA.......................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TCCCGTGGAGCATC---ATACGCAGCA........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................AGCAGGAGGACACCAGTGCGGAGGTCTT................2811.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TTAGCCGGCTGAG-------------------------ATGGGCAAGA..........................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TCCCGTGGAGCATC---ATACG.............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................AACAGCATGT---------------------CGATGTGGTG--------------------C.........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TCCATCAGAGATTTCGGTGTCCAGCGAA...............................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AAATTCCATCAGAGATTTCGGTGTCC.....................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................GTATTAGCCGGCTGAG-------------------------ATGGGCAAGA..........................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TACCACTGAT---------------------GATTCCCCGG---CTGT.....................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..................................................................................................TATTAGCCGGCTGAG-------------------------ATGGGCAAG...........................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......TCGACTGCTAAATTCCATCAGA..................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GGATCGACTGCTAAATTCCATC.....................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................T---------------------GATTCCCCGG---CTGTCATTGATTC---------TCC................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TTGATTC---------TCCCGTGGAGCATC---..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GCAGGAGGACACCAGTGCGGAGGTC..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................AGTATTAGCCGGCTGAG-------------------------ATGG................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................CAACAGCATGT---------------------CGATGTGG................................................................................................................................................................1911.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GAGATTTCGGTGTCCAGCGAAAA.............................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................AAAGGCAGGTTAT---C------------------ACAA---A.....................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.................ATTCCATCAGAGATTTCGGTGTCCAGC..................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CGGTGTCCAGCGAAAAGGCA.........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CGACTGCTAAATTCCATCAGAGAT...............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TGAG-------------------------ATGGGCAAGAAGAACA....................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TGTCATTGATTC---------TCCCGTGGAGC........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AACAACAGCATGT---------------------CGATGTGGTG--------------------CC........................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................ACCAGTATTAGCCGGCTGAG-------------------------ATG.................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................ATTCCCCGG---CTGTCATTGATTC---------...................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................AAGAAGAACAGG-----------------------AAACAAA....................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................................................................................TACCAGTATTAGCCGGCTGAG-------------------------ATGGC...............................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................CCGGCTGAG-------------------------ATGGGCAAGAAG........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................AGTATTAGCCGGCTGAG-------------------------ATGGGC..............................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGGATCGACTGCTAAATTCCATCA....................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................ATGT---------------------CGATGTGGTG--------------------CCAGCTT...................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
........................CAGAGATTTCGGTGTCCAGCG.................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................TTACCAGTATTAGCCGGCTGAG-------------------------ATGG................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TAT---C------------------ACAC---CGATTACCAGTATT........................................................................................................................................................................................................................................................................................2211.0010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................AACAGG-----------------------AAACAACAGCATGT---------------------CGATGTGG................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..................TTCCATCAGAGATTTCGGTGT.......................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TACCAGTATTAGCCGGCTGAG-------------------------ATGGGCAA............................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CAAGGATCGACTGCTAAATTCCATCAGAGA................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TACCACTGAT---------------------GATTCCCCGG---CTGTCA...................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................GAT---------------------GATTCCCCGG---CTGTC....................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TTGATTC---------TCCCGTGGAGCATC---A.................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................CGCAGCAGGAGGACACCAGTGCGG.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................TTAGCCGGCTGAG-------------------------ATGGGCAA............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TCATTGATTC---------TCCCGTGGAGC........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GCAGGAGGACACCAGTGCGGA......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............................................AAAAGGCAGGTTAT---C------------------ACAA---A.....................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AACAACAGCATGT---------------------CGATGTGGTG--------------------CCA.......................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CAAGGATCGACTGCTAAATTC.........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CGACTGCTAAATTCCATCAGAGATT..............................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................AGTATTAGCCGGCTGAG-------------------------ATGGG...............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...........................AGATTTCGGTGTCCAGCGAAA..............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
............................................GAAAAGGCAGGTTAT---C------------------ACAA---TA....................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................G-----------------------AAACAACAGCATGT---------------------CGATGTGGT...............................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................AGCATGT---------------------CGATGTGGTG--------------------CCAGCTAC..................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...........TGCTAAATTCCATCAGAGATTTCGGTG........................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TATTAGCCGGCTGAG-------------------------ATGGG...............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................................................................................................................ACAGG-----------------------AAACAACAGCATGT---------------------CGATG...................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
droSim2
CAAGGATCGCTTGCTGAATTCCATCGGAGATTTCGGGGTGCAGCGGAAAGGCAGGTTAT---C------------------CCAA---CGATTACCAGTATTAGCCGGCTGAG-------------------------ATGGGCAAGAAGAACAGG-----------------------AAACAACAGCAGGT---------------------CGATGTGGTGGCA-----------------TCAGCTGCCACTGAT---------------------GATTCCCCGG---CTGTCATTGATTC---------TCCCGCGGAGCATC---ATACGCAGCCGGAGGACACCAGTGCGGAGGTCTTCCTCTGGCTGCTGGCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................CATC---ATACGCAGCCGGAGGAC.................................2112.00200200000000000000
......................................................GTTAT---C------------------CCAA---CGATTACCAGTATTAGC.....................................................................................................................................................................................................................................................................................2711.00100000000010000000
...................................................................................................ATTAGCCGGCTGAG-------------------------ATGGGC..............................................................................................................................................................................................................................................2011.00100100000000000000
...................................................................................................................................................................................AAACAACAGCAGGT---------------------CGATGT..................................................................................................................................................................2011.00100000000001000000
...........................................................................................................................................TGGGCAAGAAGAACAGG-----------------------AAACAACAGC.................................................................................................................................................................................................2711.00100000000000010000
..............TGAATTCCATCGGAGATTTCGGGG........................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
........................................CAGCGGAAAGGCAGGTTAT---C------------------CCAA---CGA...................................................................................................................................................................................................................................................................................................2711.00100000001000000000
......................................TGCAGCGGAAAGGCAGGTTAT---C------------------CC...........................................................................................................................................................................................................................................................................................................2411.00100000000001000000
.........................................................................................................CGGCTGAG-------------------------ATGGGCAAGAAGAACAG...................................................................................................................................................................................................................................2511.00100000010000000000
...........................................................................................................................................................................................................................................................................................TCCCCGG---CTGTCATTGATTC---------TCCCGC.............................................................2611.00100000010000000000
................................................................................................AGTATTAGCCGGCTGAG-------------------------ATGGGCAAG...........................................................................................................................................................................................................................................2611.00100100000000000000
...........................................................................................................................................................G-----------------------AAACAACAGCAGGT---------------------CGATGTGG................................................................................................................................................................2311.00100000000001000000
.......................................................................................................................................................................................AACAGCAGGT---------------------CGATGTGGTG..............................................................................................................................................................2011.00100010000000000000
...........................................................................................................................................TGGGCAAGAAGAACAGG-----------------------AAACAA.....................................................................................................................................................................................................2311.00100000000000010000
............................................................................................TACCAGTATTAGCCGGCTGAG-------------------------ATGGGCAAGA..........................................................................................................................................................................................................................................3111.00100000010000000000
......TCGCTTGCTGAATTCCATCGGAGA................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
......................................................................................................................................................................................................................................................................................................TGTCATTGATTC---------TCCCGCGGAGCATC---A.................................................2711.00100010000000000000
.......................................................................................................................................................................................................................................................................................................GTCATTGATTC---------TCCCGCGGAGC........................................................2211.00100000000000100000
........................................................................................................................................................................................................................................................................................GATTCCCCGG---CTGTCATTGATTC---------T..................................................................2411.00101000000000000000
..........TTGCTGAATTCCATCGGAGATTTCGG..........................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
droSec2
CAAGGAGCGCTTGCTGAATTCCATCGGAGATTTCGGGGTCAAGCGGAAAGGCAGGTTAT---C------------------CGAA---CGATTACCAGTATTAGCCGGCTGAG-------------------------ATGGGCAAGAAGAACAAG-----------------------AAACAACAGCAGGT---------------------CGATGTGGTGTCA-----------------TCAGCTGCCACTGAT---------------------GATTCCGCGG---CTGTCATTGATTC---------TCCCGTGGAGCATC---ATACGCAGCCGGAGGACACCAGTGCGGAGGTCTTCCTCTGGCTGCTGGCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................................................................................ATTGATTC---------TCCCGTGGAGCAT......................................................2112.0020110
....................................................................................................TTAGCCGGCTGAG-------------------------ATGGGCAAGAA.........................................................................................................................................................................................................................................2411.0010010
.............................................................................................................................................................................................................................................................................................................GATTC---------TCCCGTGGAGCATC---..................................................1911.0010010
........................................................................................................................................................................................................................................................................................GATTCCGCGG---CTGTCATT.................................................................................1811.0010010
.......................................................................................................................................................................................................................................................................................................GTCATTGATTC---------TCCCGTGGAGC........................................................2211.0010010
............................................................................................................................................................................................................................................................................................................................................ATACGCAGCCGGAGGACACCA.............................2111.0010010
.........................................................AT---C------------------CGAA---CGATTACCAGTATTAGC.....................................................................................................................................................................................................................................................................................2411.0010010
..............................................................................................................................................................................................................................................................................................................................................ACGCAGCCGGAGGACACCAGTGCGG.......................2511.0010010
........................................................................................................................................................................................................................................................................................GATTCCGCGG---CTGTCATTGATTC---------T..................................................................2411.0010010
..............TGAATTCCATCGGAGATTTCGGGGT.......................................................................................................................................................................................................................................................................................................................................................2511.0010010
.............................................................................................................................................................................................................................................................................................................GATTC---------TCCCGTGGAGCAT......................................................1811.0010010
...........................................................................................TTACCAGTATTAGCCGGCT................................................................................................................................................................................................................................................................................1911.0011000
........................................................................................................................................................................................................................................................................................................................................C---ATACGCAGCCGGAGGACACCA.............................2211.0010010
..............................................................................................................................................................................................GGT---------------------CGATGTGGTGTCA-----------------TCAGC.....................................................................................................................................2111.0010010
............................................................................................................CTGAG-------------------------ATGGGCAAGAAGAACAAG-----------------------AA.........................................................................................................................................................................................................2511.0010100
..........TTGCTGAATTCCATCGGAG.................................................................................................................................................................................................................................................................................................................................................................1911.0010010
............................GATTTCGGGGTCAAGCGG................................................................................................................................................................................................................................................................................................................................................1811.0011000
...........................................................................................................................................................................................................................................................CCACTGAT---------------------GATTCCGCGG---C........................................................................................1911.0011000
..........................................................................................................................................................AG-----------------------AAACAACAGCAGGT---------------------CGAT....................................................................................................................................................................2011.0010010
droYak3
CAAGGAGCGACTGCTGAAGTTAATCAGTGATTCCGGATTCCAGAAGAAAGGCAGGTTAA---C------------------CCAC---CAATTACCAGTATTAGGAGGTTGAG-------------------------ATGGGCAAGAAAAACAAG-----------------------AAA---CAACAGGT---------------------CGATGTGGTG--------------------ACAGCTGCCAGTGAT---------------------GATTCCCTGG---CTGTCATTGATCC---------TCCCGTGGAGCATC---ATACTCAGCAGGAGGACACTAGTGCGGAGGTCTTCCTATGGCTGCTGGCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................GAT---------------------GATTCCCTGG---CTGTC....................................................................................1812.00210100000000
..........................GTGATTCCGGATTCCAGAAGAAAGGCAG........................................................................................................................................................................................................................................................................................................................................2811.00100100000000
.............................................................................................................................................................................................AGGT---------------------CGATGTGGTG--------------------ACAGCTGCC.................................................................................................................................2311.00100100000000
.................AGTTAATCAGTGATTCCGGATTCCAGAA.................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
...........................................................................................................................................................................................................................................................................................................................TCCCGTGGAGCATC---ATACTCA...........................................2111.00100000010000
...................................................................................................................................................................................................................................................................................................................................................GCAGGAGGACACTAGTGCGG.......................2011.00100100000000
....................TAATCAGTGATTCCGGATTCCAGAA.................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
................................CCGGATTCCAGAAGAAAGGCAGG.......................................................................................................................................................................................................................................................................................................................................2311.00100100000000
...................................................................................................................................................................................AAA---CAACAGGT---------------------CGATGTGGTG--------------------ACA.......................................................................................................................................2411.00100010000000
..........................................................................................................................................................................................................................................................................................................ATTGATCC---------TCCCGTGGAGC........................................................1911.00101000000000
..........................................................................................................................................................................................................................................................................................................ATTGATCC---------TCCCGTGGAGCATC---..................................................2211.00100100000000
..............................................................................................................GAG-------------------------ATGGGCAAGAAAAACAAG-----------------------AA.........................................................................................................................................................................................................2311.00100010000000
.................................................................................................GTATTAGGAGGTTGAG-------------------------ATGGGC..............................................................................................................................................................................................................................................2211.00100010000000
..........................................................................................................................................................................................AACAGGT---------------------CGATGTGGTG--------------------ACA.......................................................................................................................................2011.00100000010000
...............................................................................................................................................................................................................................................................................................................................GTGGAGCATC---ATACTCAGCAGGAG....................................2411.00100000010000
..........................................................................................ATTACCAGTATTAGGAGGTTGAG-------------------------ATGGG...............................................................................................................................................................................................................................................2811.00100000010000
..........................................................................................ATTACCAGTATTAGGAGGTTGAG-------------------------ATG.................................................................................................................................................................................................................................................2611.00100000010000
.................................................................................................................................................................................................................................................................................................................................................CAGCAGGAGGACACTAGTGCGGA......................2311.00100000010000
...........................................................................................................................................................G-----------------------AAA---CAACAGGT---------------------CGATGTGGT...............................................................................................................................................................2111.00100000010000
..............................................................................................................................................................................................................................................................................................................ATCC---------TCCCGTGGAGCATC---ATACTCAGCA........................................2811.00101000000000
............................GATTCCGGATTCCAGAAGAAAGGC..........................................................................................................................................................................................................................................................................................................................................2411.00101000000000
..........................................................................................................................................................................................AACAGGT---------------------CGATGTGGTG--------------------ACAGCTGCCAGT..............................................................................................................................2911.00100000010000
droEre2
CAAGGAGCGACTGCTGAAGTCAATCAGTGATTCTGGACTCCAGAGTAAAGGCAGGTTAC---C------------------CCAA---CAATTACTAGTATTAGCCGGTTGAG-------------------------ATGGGCAAGAAGAACAAG-----------------------AAA---CAGCAGGT---------------------CGATGTGGTG--------------------GCAGCTGCCAGTGAT---------------------GATTCCCCGG---CTGCCATTGATCC---------TCCCGTGGAGAATT---ATACTCAGGAGGAAGACACCAGCGCGGAGGTCTTCCTCTGGCTGCTGGCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................................................................ATT---ATACTCAGGAGGAAGA..................................1912.0020000110
....................................................................................................................................................................................................................................................................................................................................GAATT---ATACTCAGGAGGAAGA..................................2111.0011000000
.............................................................................................................................................................................................................................................................................................................................................TACTCAGGAGGAAGACACCAGCGCG........................2511.0011000000
........................................................................................................................................................................................................................................................................................GATTCCCCGG---CTGCCATTGAT..............................................................................2111.0011000000
...............................................AAGGCAGGTTAC---C------------------CCAA---C.....................................................................................................................................................................................................................................................................................................1811.0011000000
.....................AATCAGTGATTCTGGACTCCAGAGC................................................................................................................................................................................................................................................................................................................................................2511.0010100000
..........................................................................................................................................................................................................................................................................................................ATTGATCC---------TCCCGTGGAGAA.......................................................2011.0010001000

Generated: 05/17/2015 at 10:18 PM