ID:

dps_403

 Coordinate:

2:6851095-6851245 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-31.9 -31.5 -31.5

Flybase annnotation

CDS [Dpse\GA19308-cds]; exon [Dpse\GA19308:7]; intron [Dpse\GA19308-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ATTTTGTCAAGGAGAAAATTGGTTCTGGATTTTTCTCGGAGGTTTACAAGGTGAGTGGCAGATCCATCTGCACCATGGGGGTGCAGAGGGGGCGGGTTTTGGATGGCACTTTCATTTTTGGCGATTATTTACACAATTTTTTAATTAAACCTTAAACAATTTTATTTCGTAATTACTCAATAGGGGGAGGGGGCGGGGTTTTTTCCAACGAACCCAAAAAACAATAGCCTGGGATCTTCGGGAGAGTTTGG
**************************************************((((((((....(((.((((((((.....)))))))).)))((.((...((((.......))))...)).))..))))))))...............................(((((((.....(((........)))...)))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 M059
embryo
 GSM343916
embryo
..................................................................................................................................................................................AATAGGGGGAGGGGGTGGG...................................................... 19 1 1 9.00 9 6 3 0 0
...................................................................................................................................................................................ATAGGGGGAGGGGGTGGG...................................................... 18 1 14 2.93 41 33 8 0 0
..................................................................................................................................................................................AATAGGGGGAGGGGGTGG....................................................... 18 1 2 2.00 4 3 1 0 0
.....GTCAAGGAGAAAATTGGTTCTGGA.............................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0
........AAGGAGAAAATTGGTTCTGGATTTTTCC....................................................................................................................................................................................................................... 28 1 1 1.00 1 0 0 1 0
....................GGTTCTGGATTTTTCTCGGAGGTTTA............................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 1
................AATTGGTTCTGGATTTTTCT....................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
.............................................................................................................................TATTTACACAATTTTTTAATAAC....................................................................................................... 23 2 1 1.00 1 1 0 0 0
.TTTTGTCAAGGAAAAAATTGGTTCCGGG.............................................................................................................................................................................................................................. 28 3 1 1.00 1 1 0 0 0
...............AAATTGGTTCTGGATTTTTCT....................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0
.........................................................................................................GCACTTTCATTTTTGGCGATT............................................................................................................................. 21 0 1 1.00 1 1 0 0 0
.............GAAAATTGGTTCTGGATTTTTCC....................................................................................................................................................................................................................... 23 1 1 1.00 1 0 0 1 0
.....................................................................................GAGGGGACGGGTATTGGATG.................................................................................................................................................. 20 2 1 1.00 1 1 0 0 0
...................................................................................................................................................................................ATAGGGGGAGGGGGTGGGT..................................................... 19 2 20 0.75 15 7 8 0 0
..................................................................................................................................................................................AATAGGGGGAGGGGGTGGGT..................................................... 20 2 5 0.60 3 1 2 0 0
...................................................................................................................................................AACGCTAAACAATTTTATTT.................................................................................... 20 2 3 0.33 1 1 0 0 0
............................................................................GGAGTTGCAGAGGGGGCGGGT.......................................................................................................................................................... 21 2 5 0.20 1 1 0 0 0
.............................................................................................................................................................................TACTCATTTTGGGGAGGGGGC......................................................... 21 3 6 0.17 1 1 0 0 0
..................................................................................................................................................................................AATAGGGGGAGTGGGTGGG...................................................... 19 2 8 0.13 1 0 1 0 0
..........................................................................ATGTGGGTGCAGAGTGGG............................................................................................................................................................... 18 2 20 0.10 2 2 0 0 0
...........................................................................................................................................TTTAATAAAACCTTATAGAAT........................................................................................... 21 3 15 0.07 1 1 0 0 0
.................................................................................................................................................................................TAATAGGGGGAGGGGGTGG....................................................... 19 2 16 0.06 1 0 1 0 0
..........................................................................ATGGGCATGCAGAGGGGG............................................................................................................................................................... 18 2 19 0.05 1 0 1 0 0
....GGTCAAGGTGAAGATTGGT.................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1

Anti-sense strand reads

TAAAACAGTTCCTCTTTTAACCAAGACCTAAAAAGAGCCTCCAAATGTTCCACTCACCGTCTAGGTAGACGTGGTACCCCCACGTCTCCCCCGCCCAAAACCTACCGTGAAAGTAAAAACCGCTAATAAATGTGTTAAAAAATTAATTTGGAATTTGTTAAAATAAAGCATTAATGAGTTATCCCCCTCCCCCGCCCCAAAAAAGGTTGCTTGGGTTTTTTGTTATCGGACCCTAGAAGCCCTCTCAAACC
**************************************************((((((((....(((.((((((((.....)))))))).)))((.((...((((.......))))...)).))..))))))))...............................(((((((.....(((........)))...)))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 SRR902010
ovaries
......................................................................................................................................................................................................AAAAAAGTTCGCTCGGGTTTTT............................... 22 3 3 0.33 1 1 0 0
.........................................................................................................................................AAAAATTATTTTGGAATATCTT............................................................................................ 22 3 10 0.10 1 1 0 0
..............................................................................................................................................................................................................TTGCTGGGGTTTTTTTTTAT......................... 20 2 13 0.08 1 0 1 0
..AAACGTTTCGTCTTTTAACCA.................................................................................................................................................................................................................................... 21 3 13 0.08 1 1 0 0
......................................................................................................................................................................................................AAAAAAAGTTGCTCGGGCTT................................. 20 3 14 0.07 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:6851045-6851295 - dps_403 ATTTTGTCAAGGAGAAAATTGGTTCTGGATTTTTCTCGGAGGTTTACAAGGTGAGTGGCA------------------------------------------------------------GATCCATCTGCACCATGGGGGTGC--AGAGGGGG--CGGGTTTT-GGATGGCACTTTCATTTTTG----------------------------------------GCGATTATTTACACAATTTTTTAAT---TAAACCTTAAACAA--TTTTATTTCGTAATTACTCAATAGGGGGAGGGG-----------------------------------------------------------------------GCGGGGTTTTTTCCAACG---------------------------AACCCA----------------AAAAACAATAGCC-----TGG-----GATCTTCGGG------A--GA---------------------GTTTGG-
droPer2 scaffold_0:686548-686792 - dpe_360 ATTTTGTCAAGGAGAAAATTGGTTCTGGATTTTTCTCGGAGGTCTACAAGGTGAGTGGCA------------------------------------------------------------GATCCAT-GA--------------TG---G--GGGACGGGGTTT-TGATGGCACTTTCATTTTT-----------------------------------------GCGATTATTTATACAATTTTTTAAT---TAAACCTTAAACAA--TTTTTTTTCGTAATTACTCAATAGGGGGAGGGG---------------------------------------------------------------------GGGCGGGGTTTTTTTCCACG---------------------------AACCCAAA---AAAC-AAATTG-AAAACAAT--CC-----TGG-----TATCTTGGGA------A--GA---------------------TTTTTG-
droWil2 scf2_1100000004943:2057463-2057669 + ATTTTGTCAAGGAAAAAATTGGCTCTGGATTTTTCTCGGAGGTTTACAAGGTAAGTGAAT---TAGTTTAGTTACACTCATTTTCAT-------------------------------TTCTTCCAACAA--------------TG---G--AGCTTCATTAATTGAATGCCACTTTCGTTTTCGAAT------------------TTGCCGCAGCAATAACAATACTATTATTTACACAATT--TTAATTTTTAAACTTTACT--AGTTT----TTCGTAATTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12822:28080-28143 - ATTTTGTCAAGGAAAAAATTGGTTCCGGGTTTTTCTCAGAAGTTTACAGGGTAAGTGGAG------------------------------------------------------------AATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:32683029-32683084 - ACTTTGTTAAGGAAAAAATCGGTTCAGGGTTTTTCTCCGAAGTTTACAGGGTAAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15074:3707947-3708008 + ATTTTGTCAAGGAGAAAATCGGTTCAGGTTTTTTCTCGGAGGTTTACCGGGTAAGTGGCG------------------------------------------------------------AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13340:17546361-17546419 - ATTTCGTCAAGGAGAAGATTGGCTCGGGATTCTTCTCGGAGGTGTACAAGGTGAGTGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396721:387789-388131 + ATTTCGTCAAGGAGAAAATTGGCTCGGGATTTTTTTCGGAGGTGTACAAGGTGAGTGTGACTACAGCTTA---AGACTCGATATATTTTCCCCATGTCATGCCGAGCTATTCATCGAGTAGTTCCCACAA--------------TA---G--AGCCTCATATTT-TGATGGCACTTTCATTTTCGCAACGGCAGCAGTCA-CAATAGTAACAATGCCAAACCAATACGATTATTTACACAATT--TTAAT---TAAACTTTAAA--A--TT----TGAGTAATTACTCAATAGCTGG-----------------------------------------GGCTCATCATTCATTAT----AGCCGCCCAGAGCCGCTGAGT------------------------------------------------------AAATTGCAAAACAATGACCCAGACTCAGACCC------GGCC------A--GA---------------------TCCCAG-
droKik1 scf7180000300058:179236-179414 + GC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTATTTACACAATT--TTAAT---TAAACTTTAAA--A--TT----TTTGTAATTACTCAATAGGTATTGTGGCCGTTGCTCAGCTCTCGGTTCGGTTTTGTTCGGCCCGGCTCATCATTCATTATCATCATCCGACC-----------------------G-------------------------------------------AAATTGCAAAACAATGGCCCAGAC-CACACCGCA-CCAGAGC------A--GA---------------------GCACAG-
droFic1 scf7180000453812:123216-123275 + ACTTCGTCAAGGAGAAAATCGGATCGGGATTCTTCTCGGAGGTTTACAAGGTGAGTGGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490994:669884-669940 - ACTTCGTCAAGGAGAAAATTGGATCGGGATTTTTCTCAGAGGTCTACAAGGTAAGCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000777280:9595-9860 + TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGGCACTTTCATTTTCGCAAGAGTAACACCCGCCAACGGTAACAAAGCCAAACAAATGCGTTTATTTACACAATT--TTAAT---TAAACTTTAAA--A--TT----TTTGTAATTACTCAATAGGTATTGTGGCGGTGGCTC---------------------------GGCTCATCATTCATTATTATCATGCCGCC-----------------------GCATCCC----------CCTGC---CTGGG-CTAAAATTAAACAAAATTGCAAAACAATGGCCCAGAC-CAGACCA------GACCTGACTCA--AATCCAAGCCCATTGCCACTGCAGCTTAGC
droBia1 scf7180000302402:667233-667316 - ACTTCGTCAAGGAGAAAATCGGATCGGGATTTTTCTCGGAGGTTTACAAGGTGAGTGTCA------------------------------------------------------------GTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------AAAATTATACTATAAGGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415256:408849-408903 - ACTTCGTCAAGGAGAAAATTGGATCGGGATTTTTCTCAGAGGTTTACAAGGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409804:1157282-1157353 - ACTTCGTCAAGGAGAAAATTGGATCGGGATTCTTCTCGGAGGTTTACAAGGTAAGTGATA------------------------------------------------------------GTTCAAACTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA----------------------------------------------------
dm3 chr3R:14913112-14913176 - ACTTCGTCAAGGAGAAAATTGGATCGGGATTCTTCTCGGAGGTTTACAAGGTAAGTGACA------------------------------------------------------------ATTCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3r:6344995-6345059 + ACTTCGTCAAGGAGAAAATTGGATCGGGATTCTTCTCGGAGGTTTACAAGGTAAGTGACA------------------------------------------------------------ATTCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_77:26259-26536 + TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGGCACTTTCGTTTTCGCAACGGTAACACCCGCCAACGTTAACAAAGCCAAACAAATGCGATTATTTACACAATT--TTAAT---TAAACTTTAAA--A--TT----TTTGTAATTACTCAATAGGTATTGTGGCAGTTGTTCGGCT-----------------------GGCTCATCATTCATTATCATCA------------------------------GCATCTCCCCTCCACCCCCTTCTCTCTGGG-CCAAAATGAAACAAAATTGCAAAACAATGGCCCAGAC-CAG----CG-CCAGAGCTGACTCAAAAATCCAAACCCATTGCCAATGCAGCTTAG-
droYak3 3R:3596972-3597098 - ACTTCGTCAAGGAGAAAATTGGATCGGGATTTTTTTCGGAGGTTTACAAGGTAGGCGACA------------------------------------------------------------ATTGCGC-------------------ACATGGGT--AAACATAA-GAATCACTCTTTTAGTTTTT----------------------------------------ACAATTTTTGGTTTCATTTTTTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4770:6717115-6717174 + ACTTCGTCAAGGAGAAAATTGGATCGGGATTTTTTTCGGAGGTTTACAAGGTAGGTGACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
ATTTTGTCAAGGAGAAAATTGGTTCTGGATTTTTCTCGGAGGTTTACAAGGTGAGTGGCA------------------------------------------------------------GATCCATCTGCACCATGGGGGTGC--AGAGGGGG--CGGGTTTT-GGATGGCACTTTCATTTTTG----------------------------------------GCGATTATTTACACAATTTTTTAAT---TAAACCTTAAACAA--TTTTATTTCGTAATTACTCAATAGGGGGAGGGG-----------------------------------------------------------------------GCGGGGTTTTTTCCAACG---------------------------AACCCA----------------AAAAACAATAGCC-----TGG-----GATCTTCGGG------A--GA---------------------GTTTGG-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....GTCAAGGAGAAAATTGGTTCTGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
........AAGGAGAAAATTGGTTCTGGATTTTTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
....................GGTTCTGGATTTTTCTCGGAGGTTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100000
................AATTGGTTCTGGATTTTTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............AAATTGGTTCTGGATTTTTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
..........................................................................................................................................................................GCACTTTCATTTTTG----------------------------------------GCGATT............................................................................................................................................................................................................................................................................................2111.0010100000000
.............GAAAATTGGTTCTGGATTTTTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
droPer2
ATTTTGTCAAGGAGAAAATTGGTTCTGGATTTTTCTCGGAGGTCTACAAGGTGAGTGGCA------------------------------------------------------------GATCCAT-GA--------------TG---G--GGGACGGGGTTT-TGATGGCACTTTCATTTTT-----------------------------------------GCGATTATTTATACAATTTTTTAAT---TAAACCTTAAACAA--TTTTTTTTCGTAATTACTCAATAGGGGGAGGGG---------------------------------------------------------------------GGGCGGGGTTTTTTTCCACG---------------------------AACCCAAA---AAAC-AAATTG-AAAACAAT--CC-----TGG-----TATCTTGGGA------A--GA---------------------TTTTTG-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................GTTCTGGATTTTTCTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003300000
...........................GATTTTTCTCGGAGGTCTACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.................ATTGGTTCTGGATTTTTCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....................GGTTCTGGATTTTTCTCGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....TGTCAAGGAGAAAATTGGTTCTGGATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
droWil2
ATTTTGTCAAGGAAAAAATTGGCTCTGGATTTTTCTCGGAGGTTTACAAGGTAAGTGAAT---TAGTTTAGTTACACTCATTTTCAT-------------------------------TTCTTCCAACAA--------------TG---G--AGCTTCATTAATTGAATGCCACTTTCGTTTTCGAAT------------------TTGCCGCAGCAATAACAATACTATTATTTACACAATT--TTAATTTTTAAACTTTACT--AGTTT----TTCGTAATTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........AAGGAAAAAATTGGCTCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
......................................GAGGTTTACAAGGTAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
.................ATTGGCTCTGGATTTTTCTCGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
....................GGCTCTGGATTTTTCTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.................ATTGGCTCTGGATTTTTCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...........................GATTTTTCTCGGAGGTTTACAAGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
............AAAAAATTGGCTCTGGATTTTTCTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
............................ATTTTTCTCGGAGGTTTACAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.................ATTGGCTCTGGATTTTTCTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
droVir3
ATTTTGTCAAGGAAAAAATTGGTTCCGGGTTTTTCTCAGAAGTTTACAGGGTAAGTGGAG------------------------------------------------------------AATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.TTTTGTCAAGGAAAAAATTGGTTCCGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28175.007500380623000010000000000001010201000000014300000000000000000001020
...TTGTCAAGGAAAAAATTGGTTCCGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26155.005500102101200000000000003001204060300001017100000000000000000000100
.TTTTGTCAAGGAAAAAATTGGTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24150.005000321042000000300000000011010000000000014400000000000000000000050
.TTTTGTCAAGGAAAAAATTGGTTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25144.00441030410000001020000000000000000001000001100000000000000000000020
.................................TCTCAGAAGTTTACAGGGTAAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................25131.00310013011000000000000000000003010100100004500000000000000000000010
.TTTTGTCAAGGAAAAAATTGGTTCCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27130.0030008031100000010000000000100030100000009200000000000000000000000
.TTTTGTCAAGGAAAAAATTGGTTCCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26118.00180012030000000000000000000000000000000001200000000000000000000000
..TTTGTCAAGGAAAAAATTGGTTCCGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27115.0015002005300000000000000010001030000000000000000000000000000000000
.................................TCTCAGAAGTTTACAGGGTAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................23114.0014002020100000010000000000000000000001003200000000000000000000020
....TGTCAAGGAAAAAATTGGTTCCGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25113.0013000000300000000000001000002030300000000100000000000000000000000
.................................TCTCAGAAGTTTACAGGGTAAGTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................26112.0012007020000000000000000000000010000000001000000000000000000000010
...................................TCAGAAGTTTACAGGGTAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21111.0011001010100000010000001000000000000000002300000000000000000000010
...TTGTCAAGGAAAAAATTGGTTCCGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27110.0010000001100000100000000000101020100001001000000000000000000000000
.................................TCTCAGAAGTTTACAGGGTAAGTGGAG------------------------------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................2719.009003010000000000000000000000020100000002000000000000000000000000
...TTGTCAAGGAAAAAATTGGTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2219.009000007100000000000000000000000000000000100000000000000000000000
....TGTCAAGGAAAAAATTGGTTCCGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2618.008000000300000000000000000002030000000000000000000000000000000000
...TTGTCAAGGAAAAAATTGGTTCCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2517.007000000300000000000001000200000000100000000000000000000000000000
...................................TCAGAAGTTTACAGGGTAAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2217.007003010000000000000000000000010100000001000000000000000000000000
...................................TCAGAAGTTTACAGGGTAAGTGGAG------------------------------------------------------------A..........................................................................................................................................................................................................................................................................................................................................................................................................2616.006000020000000000000000000001000000000003000000000000000000000000
.................................TCTCAGAAGTTTACAGGGTAAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2416.006004010000000000000000000000000000000001000000000000000000000000
................................TTCTCAGAAGTTTACAGGGTAAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2616.006003000000000000000000000000010000000001000000000000000000000010
...................................TCAGAAGTTTACAGGGTAAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2316.006003010000000000000000000000000000000001100000000000000000000000
..............................TTTTCTCAGAAGTTTACAGGGTAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2616.006001000000000010000001000000000000000000300000000000000000000000
....TGTCAAGGAAAAAATTGGTTCCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.005000000000000000000000001001020000000001000000000000000000000000
..TTTGTCAAGGAAAAAATTGGTTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.005003100000000000000000000000010000000000000000000000000000000000
...................................TCAGAAGTTTACAGGGTAAGTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.005000020000000000000000000000000000000002100000000000000000000000
.............................TTTTTCTCAGAAGTTTACAGGGTAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.004001000000000000000000000000010000100000100000000000000000000000
....TGTCAAGGAAAAAATTGGTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.004000000000000000000000001000020100000000000000000000000000000000
...................................TCAGAAGTTTACAGGGTAAGTGGAG------------------------------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................2514.004000010000000000000000000000000000000003000000000000000000000000
.TTTTGTCAAGGAAAAAATTGGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.004002100000000000000000000000000000000001000000000000000000000000
...................................TCAGAAGTTTACAGGGTAAGTGGAG------------------------------------------------------------AA.........................................................................................................................................................................................................................................................................................................................................................................................................2714.004001000000000000000000000000010000000001000000000000000000000010
...................................TCAGAAGTTTACAGGGTAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003000010000000000000000000000000000000000200000000000000000000000
...............................TTTCTCAGAAGTTTACAGGGTAAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.003001000000000000000000001000000000000000000000000000000000000010
.TTTTGTCAAGGAAAAAATTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.003000011100000000000000000000000000000000000000000000000000000000
................................TTCTCAGAAGTTTACAGGGTAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.003000010000000000000000000000000100000000100000000000000000000000
...............................TTTCTCAGAAGTTTACAGGGTAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.003000000000000000000000000000030000000000000000000000000000000000
..................................CTCAGAAGTTTACAGGGTAAGTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002002000000000000000000000000000000000000000000000000000000000000
...................................TCAGAAGTTTACAGGGTAAGTGGAG------------------------------------------------------------AAT........................................................................................................................................................................................................................................................................................................................................................................................................2812.002001000000000000000000000000000000000000100000000000000000000000
....................................CAGAAGTTTACAGGGTAAGTGGAG------------------------------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................2412.002001000000000000000000000000000100000000000000000000000000000000
...............................TTTCTCAGAAGTTTACAGGGTAAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002001000000000000000000000000010000000000000000000000000000000000
...TTGTCAAGGAAAAAATTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000200000000000000000000000000000000000000000000000000000000
.................................TCTCAGAAGTTTACAGGGTAAGTGGAG------------------------------------------------------------A..........................................................................................................................................................................................................................................................................................................................................................................................................2812.002002000000000000000000000000000000000000000000000000000000000000
.................................TCTCAGAAGTTTACAGGGTAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000000000000000000000000000010000000001000000000000000000000000
..............................TTTTCTCAGAAGTTTACAGGGTAAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002000000000000000000000000001000000000000100000000000000000000000
.....GTCAAGGAAAAAATTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000001000000000000000000000000000000000000000000000000
...............AAATTGGTTCCGGGTTTTTCTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000010000000000000000000000000000000000000000
...TTGTCAAGGAAAAAATTGGTTCCGGGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000010000000000000000000000000000000000
..............................TTTTCTCAGAAGTTTACAGGGTAAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.....GTCAAGGAAAAAATTGGTTCCGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000001000000000000000000000000
..TTTGTCAAGGAAAAAATTGGTTCCGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000010
..TTTGTCAAGGAAAAAATTGGTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000010000000000000000000000000000000000
..................TTGGTTCCGGGTTTTTCTCAGAAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000100000000000000000000000000000000
...TTGTCAAGGAAAAAATTGGTTCCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000010000000000000000000000000000000000
............AAAAAATTGGTTCCGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000100000000000000000000000000000000000000000000000000000000
....TGTCAAGGAAAAAATTGGTTCCGGGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000100000000000000000000000000000000
....................................CAGAAGTTTACAGGGTAAGTGGAG------------------------------------------------------------A..........................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
...............................TTTCTCAGAAGTTTACAGGGTAAGTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000010000000000000000000000000000000000
....................................CAGAAGTTTACAGGGTAAGTGGAG------------------------------------------------------------AATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2811.001000001000000000000000000000000000000000000000000000000000000000
..........GGAAAAAATTGGTTCCGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................CTCAGAAGTTTACAGGGTAAGTGGAG------------------------------------------------------------A..........................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..TTTGTCAAGGAAAAAATTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.TTTTGTCAAGGAAAAAATTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................TTCTCAGAAGTTTACAGGGTAAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000100000000000000000000000000000000000000000000000000000000
....TGTCAAGGAAAAAATTGGTTCCGGGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000010000000000000000000000000000000000
.........AGGAAAAAATTGGTTCCGGGTTTTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
........................CCGGGTTTTTCTCAGAAGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000001000000000000000000000000000000000000
.................................TCTCAGAAGTTTACAGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000010000000000000000000000000000000000
...........................................TTACAGGGTAAGTGGAG------------------------------------------------------------AATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2111.001000000000000000000000000000010000000000000000000000000000000000
...TTGTCAAGGAAAAAATTGGTTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000010000000000000000000000000000000000
........AAGGAAAAAATTGGTTCCGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010000000000000000000000000000000000000000000000000000000000
................................TTCTCAGAAGTTTACAGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
....TGTCAAGGAAAAAATTGGTTCCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000001000000000000000000000000000000000000
..TTTGTCAAGGAAAAAATTGGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
....................................CAGAAGTTTACAGGGTAAGTGGAG------------------------------------------------------------AAT........................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.................................TCTCAGAAGTTTACAGGGTAAGTGGAT------------------------------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000001000000000000000000000000000000000000
.......................................AAGTTTACAGGGTAAGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.............AAAAATTGGTTCCGGGTTTTTCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
........AAGGAAAAAATTGGTTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.TTTTGTCAAGGAAAAAATTGGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................................TTTACAGGGTAAGTGGAG------------------------------------------------------------AATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2211.001000000000000010000000000000000000000000000000000000000000000000
...................TGGTTCCGGGTTTTTCTCAGAAGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
.TTTTGTCAAGGAAAAAATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001000000000000000000000000000000000000000000000000000000000
...TTGTCAAGGAAAAAATTGGTTCCGGGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000100000000000000000000000000000000000000000000000000000000
droMoj3
ACTTTGTTAAGGAAAAAATCGGTTCAGGGTTTTTCTCCGAAGTTTACAGGGTAAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................TTTTCTCCGAAGTTTACAGGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
droGri2
ATTTTGTCAAGGAGAAAATCGGTTCAGGTTTTTTCTCGGAGGTTTACCGGGTAAGTGGCG------------------------------------------------------------AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
ATTTCGTCAAGGAGAAGATTGGCTCGGGATTCTTCTCGGAGGTGTACAAGGTGAGTGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................TCGGGATTCTTCTCGGAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100
...............AGATTGGCTCGGGATTCTTCTCGGAGGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000010
................GATTGGCTCGGGATTCTTCTCGGAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
.............GAAGATTGGCTCGGGATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
droBip1
ATTTCGTCAAGGAGAAAATTGGCTCGGGATTTTTTTCGGAGGTGTACAAGGTGAGTGTGACTACAGCTTA---AGACTCGATATATTTTCCCCATGTCATGCCGAGCTATTCATCGAGTAGTTCCCACAA--------------TA---G--AGCCTCATATTT-TGATGGCACTTTCATTTTCGCAACGGCAGCAGTCA-CAATAGTAACAATGCCAAACCAATACGATTATTTACACAATT--TTAAT---TAAACTTTAAA--A--TT----TGAGTAATTACTCAATAGCTGG-----------------------------------------GGCTCATCATTCATTAT----AGCCGCCCAGAGCCGCTGAGT------------------------------------------------------AAATTGCAAAACAATGACCCAGACTCAGACCC------GGCC------A--GA---------------------TCCCAG-SizeHit CountTotal NormTotal
No Reads
droKik1
GC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATTATTTACACAATT--TTAAT---TAAACTTTAAA--A--TT----TTTGTAATTACTCAATAGGTATTGTGGCCGTTGCTCAGCTCTCGGTTCGGTTTTGTTCGGCCCGGCTCATCATTCATTATCATCATCCGACC-----------------------G-------------------------------------------AAATTGCAAAACAATGGCCCAGAC-CACACCGCA-CCAGAGC------A--GA---------------------GCACAG-SizeHit CountTotal NormTotal
No Reads
droFic1
ACTTCGTCAAGGAGAAAATCGGATCGGGATTCTTCTCGGAGGTTTACAAGGTGAGTGGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ACTTCGTCAAGGAGAAAATTGGATCGGGATTTTTCTCAGAGGTCTACAAGGTAAGCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGGCACTTTCATTTTCGCAAGAGTAACACCCGCCAACGGTAACAAAGCCAAACAAATGCGTTTATTTACACAATT--TTAAT---TAAACTTTAAA--A--TT----TTTGTAATTACTCAATAGGTATTGTGGCGGTGGCTC---------------------------GGCTCATCATTCATTATTATCATGCCGCC-----------------------GCATCCC----------CCTGC---CTGGG-CTAAAATTAAACAAAATTGCAAAACAATGGCCCAGAC-CAGACCA------GACCTGACTCA--AATCCAAGCCCATTGCCACTGCAGCTTAGCSizeHit CountTotal NormTotal
No Reads
droBia1
ACTTCGTCAAGGAGAAAATCGGATCGGGATTTTTCTCGGAGGTTTACAAGGTGAGTGTCA------------------------------------------------------------GTTGT---------------------------------------------------------------------------------------------------------------------------------------------------------AAAATTATACTATAAGGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ACTTCGTCAAGGAGAAAATTGGATCGGGATTTTTCTCAGAGGTTTACAAGGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
ACTTCGTCAAGGAGAAAATTGGATCGGGATTCTTCTCGGAGGTTTACAAGGTAAGTGATA------------------------------------------------------------GTTCAAACTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA----------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
ACTTCGTCAAGGAGAAAATTGGATCGGGATTCTTCTCGGAGGTTTACAAGGTAAGTGACA------------------------------------------------------------ATTCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................GATTCTTCTCGGAGGTTTAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AAATTGGATCGGGATTCTTCTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000010000000000
.................ATTGGATCGGGATTCTTCTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GAAAATTGGATCGGGATTCTTCTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............AAATTGGATCGGGATTCTTCTCGGAGGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TCGTCAAGGAGAAAATTGGATCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AATTGGATCGGGATTCTTCTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATCGGGATTCTTCTCGGAGGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GGGATTCTTCTCGGAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TTCGTCAAGGAGAAAATTGGATCGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GATCGGGATTCTTCTCGGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GAAAATTGGATCGGGATTCTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATTGGATCGGGATTCTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GAAAATTGGATCGGGATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.......................TCGGGATTCTTCTCGGAGGTTTACAAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TTGGATCGGGATTCTTCTCGGAGGTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGGATCGGGATTCTTCTCGGAGGTTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AATTGGATCGGGATTCTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.............GAAAATTGGATCGGGATTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............GAAAATTGGATCGGGATTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
ACTTCGTCAAGGAGAAAATTGGATCGGGATTCTTCTCGGAGGTTTACAAGGTAAGTGACA------------------------------------------------------------ATTCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................TTGGATCGGGATTCTTCTCGGAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200200000000000000
......................ATCGGGATTCTTCTCGGAGGTTTACAAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
ACTTCGTCAAGGAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000000001000000
droSec2
TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGGCACTTTCGTTTTCGCAACGGTAACACCCGCCAACGTTAACAAAGCCAAACAAATGCGATTATTTACACAATT--TTAAT---TAAACTTTAAA--A--TT----TTTGTAATTACTCAATAGGTATTGTGGCAGTTGTTCGGCT-----------------------GGCTCATCATTCATTATCATCA------------------------------GCATCTCCCCTCCACCCCCTTCTCTCTGGG-CCAAAATGAAACAAAATTGCAAAACAATGGCCCAGAC-CAG----CG-CCAGAGCTGACTCAAAAATCCAAACCCATTGCCAATGCAGCTTAG-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
ACTTCGTCAAGGAGAAAATTGGATCGGGATTTTTTTCGGAGGTTTACAAGGTAGGCGACA------------------------------------------------------------ATTGCGC-------------------ACATGGGT--AAACATAA-GAATCACTCTTTTAGTTTTT----------------------------------------ACAATTTTTGGTTTCATTTTTTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................TTTTTCGGAGGTTTACAAGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
............AGAAAATTGGATCGGGATTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
................AATTGGATCGGGATTTTTTTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000
.............GAAAATTGGATCGGGATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
.............GAAAATTGGATCGGGATTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.................ATTGGATCGGGATTTTTTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.....GTCAAGGAGAAAATTGGATCGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.............GAAAATTGGATCGGGATTTTTTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
.........................................GTTTACAAGGTAGGCGACA------------------------------------------------------------ATTGCGC-------------------.................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
droEre2
ACTTCGTCAAGGAGAAAATTGGATCGGGATTTTTTTCGGAGGTTTACAAGGTAGGTGACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............GAAAATTGGATCGGGATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
..........GGAGAAAATTGGATCGGGATTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000

Generated: 05/17/2015 at 10:18 PM