ID:

dps_370

 Coordinate:

2:5498410-5498560 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.0 -26.7 -26.7

Flybase annnotation

five_prime_UTR [Dpse\GA19204-u5]; CDS [Dpse\GA19204-cds]; exon [Dpse\GA19204:2]; intron [Dpse\GA19204-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GACGACGAATGCTAAACAACACGGCTGGCCTCAAGGTGTAAGCAATAGAGACAGGTCTGCAAATGGCAGCAATAAAAACTTGGAGTCGCTGCCTTCTGCCTCCACCCAAAGCGTGTCAAGTCCAAAAGCTAATTGCTTAACCCCTCCGAATGCTGGTAACAAAACACTAATTAAATTGTTATTTTCTTGTTTTACTTGAAGGTTGATGCAATATGCCGCCCAACGCCCATGCCGGTGCCCAGTCCATCACG
**************************************************.(((((..(((...((((((.................))))))...)))....(((...(((((....((.....((((.....)))).....))....))))))))(((((.....((((......)))).....)))))..)))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 GSM343916
embryo
................................................................................................................................................................................................................................GCCCATGCCGGTGCCCAGT........ 19 0 1 1.00 1 0 1 0
........................................................................................................................................................................................................................CGCCCAACGCCCATGCCG................. 18 0 1 1.00 1 1 0 0
............................................................................................................................................................................................................................CAACGCCCATGCCGGTGCCC........... 20 0 1 1.00 1 1 0 0
.....................................................................CAATAAAAACTTGGAGTCGCTGC............................................................................................................................................................... 23 0 1 1.00 1 0 1 0
........................................................................TAAAAACTTGGAGTCCTT................................................................................................................................................................. 18 2 3 0.67 2 2 0 0
......................................................................ACTAAAAACTTGGAGTCCTTG................................................................................................................................................................ 21 3 2 0.50 1 1 0 0
....................................................................................................................................................................................................AAAAGGTTGATGCAATATGCC.................................. 21 2 2 0.50 1 0 1 0
.........................................................................AAAAAGTTGGAGTCAGTGCCT............................................................................................................................................................. 21 3 3 0.33 1 1 0 0
.....................................................................TACTAAAAACTTGGAGTCCCT................................................................................................................................................................. 21 3 3 0.33 1 1 0 0
........................................................................TAAAAACTTGGAGTCCTTCCC.............................................................................................................................................................. 21 3 4 0.25 1 1 0 0
.........................................................................AAAAAGTTGGAGCCGGTGCCTT............................................................................................................................................................ 22 3 4 0.25 1 1 0 0
....................................................................................................................................................................................................AACAGGTTGATGCAATATGCC.................................. 21 3 4 0.25 1 0 0 1
.......................................................................CTAAAAACTTGGAGTCCTTG................................................................................................................................................................ 20 3 5 0.20 1 1 0 0
.....................................................................TACTAAAAACTTGGAGTC.................................................................................................................................................................... 18 2 6 0.17 1 1 0 0
......................................................................ACTAAAAACTTGGAGTCC................................................................................................................................................................... 18 2 8 0.13 1 1 0 0
.........................................................................AAAAAGTTGGAGCCGGTGCC.............................................................................................................................................................. 20 3 16 0.06 1 1 0 0

Anti-sense strand reads

CTGCTGCTTACGATTTGTTGTGCCGACCGGAGTTCCACATTCGTTATCTCTGTCCAGACGTTTACCGTCGTTATTTTTGAACCTCAGCGACGGAAGACGGAGGTGGGTTTCGCACAGTTCAGGTTTTCGATTAACGAATTGGGGAGGCTTACGACCATTGTTTTGTGATTAATTTAACAATAAAAGAACAAAATGAACTTCCAACTACGTTATACGGCGGGTTGCGGGTACGGCCACGGGTCAGGTAGTGC
**************************************************.(((((..(((...((((((.................))))))...)))....(((...(((((....((.....((((.....)))).....))....))))))))(((((.....((((......)))).....)))))..)))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 SRR902010
ovaries
 GSM343916
embryo
........................................................................................................GGGTTTCGCACAGTTCAGGT............................................................................................................................... 20 0 1 1.00 1 1 0 0 0
.........................................................................................................................................................................................................................CGGGTTGCGGGTACGGCCAC.............. 20 0 1 1.00 1 1 0 0 0
..............................................................................CAAGATCAGCGACGGAAGACG........................................................................................................................................................ 21 3 17 0.82 14 13 0 0 1
...............................................................................AAGATCAGCGACGGAAGACG........................................................................................................................................................ 20 2 4 0.75 3 3 0 0 0
.............................................................................................................................................................................................................................TGGCGGGTACGGCCGCGGGGCA........ 22 3 2 0.50 1 1 0 0 0
..............................................................................AAAGATCAGCGACGGAAGACG........................................................................................................................................................ 21 3 15 0.33 5 5 0 0 0
........................................................................ATTTTTGAACCTCAGGAA................................................................................................................................................................. 18 2 3 0.33 1 1 0 0 0
................................................................................AGATCAGCGACGGAAGACG........................................................................................................................................................ 19 2 17 0.29 5 4 0 0 1
................................................................................AAATCAGCGACGGAAGACG........................................................................................................................................................ 19 2 8 0.25 2 2 0 0 0
.................................................................................................................................................................................................................TTATACGGCGGGTTGAGCGC...................... 20 3 5 0.20 1 0 1 0 0
................................................................................................................CACAGTTCAGGTTCACGA......................................................................................................................... 18 2 7 0.14 1 0 0 1 0
......................................................................TGATTTTTGAACCTCAGG................................................................................................................................................................... 18 2 8 0.13 1 1 0 0 0
................................................................................................................................................................................................................................CGGGTACGGCCGCGGGGCAA....... 20 3 10 0.10 1 0 1 0 0
...................................................................................................................................................................................................................................GTACAACCAAGGGTCAGGT..... 19 3 14 0.07 1 1 0 0 0
............................................................................................GAAGAGGGAGGTGGGTAT............................................................................................................................................. 18 2 16 0.06 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:5498360-5498610 + dps_370 GACGACGAAT----------------------------GCTAAA--CAACACGGCTGG-----------------------CCTCAAGGTGTAAGCAATAGAGAC--AGGT--CTGCAAATGGCAGCAATAAAA----ACTTGGAGTCGCTGCCTTCTGCCTCCAC-CCAAAGCGTGTCAAGTCCAAA---------------AGCTAATTGCTTAACCCCTCCGAATGCTGGTAA------------C-AAAACACTAATTAA--------------------------ATTGTTA-T--TT---TCTTGT----------------------------------------------T---TT---------ACT-----TGAAGGTTGA------------TGCAATATGCCGCCCAACGCCCATGCCGGTGCCCAGTCCATCACG
droPer2 scaffold_19:1214857-1215107 + GACGACGAAT----------------------------GCTAAA--CAACACGGCTGG-----------------------CCTCAAGGTGTAAGCAATAGAGAC--AGGT--CTGCAAATGGCAGCAATAAAA----ACTTGGAGTCGCTGCCTTCTGCCTCCAC-CCAAAGCGTGTCAAGTCCAAA---------------AGCTAATTGCTTAACCCCTCCGAATGCTGGTAA------------C-AAAACACTAATTAA--------------------------ATTGTTA-T--TT---TCTTGT----------------------------------------------T---TT---------ACT-----TGAAGGTTGA------------TGCAATATGCCGCCCAACGCCCATGCCGGTGCCCAGTCCATCACG
droWil2 scf2_1100000004943:14785698-14785844 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAC-CCAAAGCATGTCAAGTTCAAA-CAAACAATTTGCATAGCTAATTAAC--------------------------------------------------A-GTTAAATTTAATTGTTTAA-----ATGTTTA-T--TG---TTG-------T--------------------------------GTT--TTTT-----------------T-----TTACAGCTGC------------TGCAATATGCCACCGAATGCTCATGCCGGTGCCCCGTCCATAACG
droVir3 scaffold_13047:8254514-8254586 - GT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------GGTTTT--TT----------GTTGCAG-----CAACTGGTGC------------CACAATATGCCGCCCAACGCAACCGCCGGAGGGCAGTCGATTACC
droMoj3 scaffold_6540:27937605-27937764 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCGTGTCAAGTTCAGCTTAGTCAATTTGTTTAACTAATTGCGCAAT------------------GCATTAATTTAA-------------------------------------------AATTTA-A--TG---TCTTTTTATTC--------------------------------TCT--GTC------------TC-----TTTCACTACAGCTGGTACCAACACTAACACACTATGCCGCCCAACGCAACCGCTGGAGGCCAGTCGATTACT
droGri2 scaffold_15074:1355795-1355941 + AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGTGTCAAGTTCAGCTTAGCCAAATTACTTAGTTAATTGTCTT-G------------------CCCCAGAATTTACTTGAAAGCT-------------------------------------AA-A--AG---TGT-----------------------------------------TTCTT--TT----------TTTT--------AAGCAGTTGGTAC---------AACAGAATGCCGCCAAACGCCACCGCTGGAGGCCAGTCGATAACC
droAna3 scaffold_13340:7652127-7652388 + GGCGATGAA---------------------------------A-----------------------------------ACAACTCGCG-T-TAGGCAAGAATGGCAAAGGTGTC--CGTCCG---GTCACAA-------TTTAGACTCAC------------CTGC-CGAAAGCGTGTCAAGTTCAGAT--------------AGCTAATTGCTCAAA------------------ACACCAACATTGC--ATACACTAATTGCT-CTTTTGTTTATATGTTTCT-----TTGCTTG-G--TA---TTG-------CG--------ACTTGGAGCTTGCGACTAAATT-ATACTT--TT----------TTTTAAC-----TCACAGTTGA------------CGCAAGATGCCACCCAACGCCCATGCCGGAGCCCAGTCCATCACG
droBip1 scf7180000396708:1192509-1192730 - GGCTAAGAAT-----------GG-CAAA---------------------------------------------------------GGTGT-----------------------CC------G---GTCACAA-------CTTAGACTCAC------------CTGC-CGAAAGCGTGTCAAGTTCAGAT--------------AGCTAATTGCTCAAA------------------ACACCAACATTGC--ATACACTAATTGCT-CTTTTGTTTATGTATTTT----------------------GCA-------TTGCCTTGTT---------TTGCGACTAAACTATAA--TTTT-------------TTAAC-----CCACAGTTGA------------CGCAAGATGCCACCGAACGCCCATGCCGGAGCCCAGTCCATTACG
droKik1 scf7180000302475:334865-335055 + C------------------------------------------------------------------------------CTCCT---------------------------------------------------------------------------------C-GGAAAGCGTGTCAAGTTCAACT---------GGCTTGGCTAATTGCCCAAT------------------TCACCGAGTTGGCTC--ACACTAATTGCT-ATTTTGTTTATTTCTTTATGCCAATAACTAACAAGTGTTTTTG-------TT-------------------------------GCTCTC--TT----------CCCTCAC-----CTGCAGTTGA------------TGCAAAATGCCGCCCAACGCCCAGGCCGGTGCCCAGTCCATTACG
droFic1 scf7180000453812:815753-815966 - GAATTA------------AATATCCAAAGGG------TACTCAACTCG------------------------------GCACCTC----------------------------------------------------------AAATCAC------------TTCCCAAAAAGCGTGTCAAGTTCAGCT----------AGCTGGCTAATTGGCCAAG------------------CC---------------ACACTAATTGCT-ATTTTGTTTGTTTCGTTAC-----TGACTTG-T--TT---TTT-------CT-------------------------------TCT--C--TTTTT--ATGTATTATTAC-----TGACAGTTGA------------TGCAAAATGCCGCCCAACGCCCAACAAGGTGCCCAGTCCATCACG
droEle1 scf7180000490702:26240-26493 - GAATTT------------AGTAT-GAAAGGGTACGGACACTCGACTTGAC--------------------TCGAC--GGCACCTCGGGGT-----------------------CT------G---GCCATAAAGAGCTGTTT-AAATCGC------------CTCC-CAAAAGCGTGTCAAGTTCAGCT--------------GGCTAATTGCCCAAG------------------CCACCAAGTTGGCGCACACAGTAATTGCT-ATTTTGTTTATTTCGTTAC-----TGACGTG-T--TG---T-T-------T--------------------------------CAT--CTTTT---TT-------CCCAC-----CAACAGTTGA------------TGCAAGATGCCGCCCAACGCCCAAGCCGGTGCCCAGTCCATCACG
droRho1 scf7180000779237:54516-54766 + GAATTT------------AGTAT-CAAAGG-TTCGGGTACTCGTCTTGAC--------------------TCGAC--GACACCTCGGGGT-----------------------CT------G---GCCATAAAGAGCTGCTC-GAATCAC------------CTCC-CCAAAGCGTGTCAAGTTCAACA--------------AGCTAATTGCCCAAG------------------CCACCAAGTTGGCA--CACACTAATTGCT-ATTTTGTTTATTTCGTTGC-----TAACTTT-T--TG---T-T-------T--------------------------------TTT--CTTTT---TT-------CCCAC-----CGACAGTTAA------------TGCAAGATGCCGCCCAACGCCCAAGCCGGTGCCCAGTCCATCACG
droBia1 scf7180000302155:29209-29448 - CTCGACCACT-----------------------------------------------------------------TGAACACCTCGGGGT-----------------------CG------G---GCCATAAAGAGCTGCTCGGCTTCAC------------CTCC-CCAAAGCGTGTCAAGTTCAGCT----------GGCTGGCTAATTGCCCAAG------------------CCACCAAGTTGGCTCACACAATAATGGCT-CTTTTGTTGATTTCGTTAC-----TAAAGTG-A--TGTTTATT-------TT-------------------------------CCT--CTTT------ATGT-TCCTAAC--CGACAACAGTTGA------------TGCAAGATGCCGCCCAACGCACAAGCCGGTGCCCAGTCCATCACG
droTak1 scf7180000415366:255009-255265 - GAATTT------------AATAT-CAAAAGG------TACTCA-------------------------------C--GACACCTCGGGGTCT---------------------CT------G---GCCATAAAGAGCTGCTCGGAATCAC------------CTCC-CCGAAGCGTGTCAAGTTCAGCT--------------GGCTAATTGCCCCAG------------------CCACCAAGTTGGCTCACACACTAATTGCT-CTTTTGTCTATTTCGTCAC-----TAACATA-C--TGTTTGCT-------TTGCTCTTTT---------TTTT----------GTTGTT--GT----------TTCTAAC-----CCACAGTTGA------------TGCAAGATGCCGCCCAACGCCCAAGCCGGTGCCCAGTCCATCACG
droEug1 scf7180000409615:517103-517329 + C------------------------AAAGGG------AACTCAACGCA------------------------------ACACCTCGGGGT-----------------------CT------G---GTCATAAATAGCTTCTCGGAATCAC------------CTCCCCAAAAGCGTGTCAAGTTCAGAT--------------GTCTAATTGCCGAAG------------------CCACCAAGTTGGCACACACACTAATTGCTTATTTTGTTTATTATGTTAC-----TAACTTA-T--TG---TGT----------------------------------------TGT--TTTTT---TT-----------------CAACAGTTGA------------TGCAAGATGCCGCCCAACGCCCAAGCCGGTGCCCAGTCCATCACG
dm3 chr3R:8270278-8270569 + GAATATGCATATGTACACAATAT-CAAAGGG------TACTCCACTCAACTCAACTCA----------GCTCGACTGGACACCTCGGGGT-----------------------CT------G---GCCATAAAGAGCCGCTCGGAGTCAC------------CTAG-CCAAAGCGTGTCAAGTTCAGT-CATTCTGCTCACCTGGCTAATTGCCCAAGTCA---------------CCACCAAGTTGGCACACACACTAATTGCT-CTTTTGTTTATGTCGTTAC-----TAATTTG-T--TG---GTT-------T--------------------------------TAT--CTTTT---TT----------ACTCGCACACCAGTTGA------------TGCAACATGCCGCCCAACGCCCAAGCCGGTGCCCAGTCCATCTCA
droSim2 3r:12843941-12844222 - GAATATACATGTGTACACAATAT-CAAAGGG------TACTCAACTCAGC--------------------TCGACTGGACACCTCGGGGT-----------------------CT------G---GCCATAAAGAGCCGCTCGGAGTCAC------------CTAG-CCAAAGCGTGTCAAGTTCAGT-CATTCGGCTCACCTGGCTAATTGCCCAAGCCA---------------CCACCAAGTTGGCACACACACTAATTGCT-CTTTTGTTTATGTCGTTAC-----TAATTTG-T--TG---GCT-------T--------------------------------TAT--CTTCT---TT----------ACTCGCACACCAGTTGA------------TGCAAGATGCCGCCCAACGCCCAAGCAGGTGCCCAGTCCATCTCG
droSec2 scaffold_0:13676821-13677102 - GAATATACATGTGTACACAATAT-CAAAGGG------TACTCAACTCAGC--------------------TCGACTGGACACCTCGGGGT-----------------------CT------G---GCCATAAAGAGCCGCTCGGAGTCAC------------CTAG-CCAAAGCGTGTCAAGTTCAGT-CATTCGGCTCACCTGGCTAATTGCCCAAGCCA---------------CCACCAAGTTGGCACACACACTAATTGCT-CTTTGGTTTATGTCGTTAC-----TAATTTG-T--TG---GCT-------T--------------------------------TAT--CTTCT---TT----------ACTCGCACACCAGTTGA------------TGCAAGATGCCGCCCAACGCCCAAGCCGGTGCCCAGTCCATCTCG
droYak3 3R:12593685-12593973 + GAATAT--------ACACAATAT-TTAAGGG------TACTCAAATCAACACAGCTTAGCTCAGCCCAGCTCGACTGGACACCTCGGGGT-----------------------CT------G---GCCATAAAAAGCCGCTTGGAATCAC------------CAAG-TCAAAGCGTGTCAAGTTCAGT-CATTCGACTCACCTGGCTAATTGCCCAAG------------------CCACCAAGTTGGCACAGACACTAATTGCT-CTTTTGTTTATGTCGTTTC-----TAATTTG-T--TG---GCT-------T--------------------------------TGA--CTTCT---TT----------C--CGCACGCCAGTTGA------------TGCAAGATGCCGCCCAACGCCCAAGCCGGTGCCCAGTCCATCTCG
droEre2 scaffold_4770:13350440-13350718 - GAATAT--------ACACAATAT-CAAAGGG------TACTCAACTCAACTCAGCTCA----------GCTCAACTGGACACCTCGGGGT-----------------------CT------G---GCCATAAAAAGCCGCTCGGAATCAC------------CTAG-TCAAAGCGTGTCAAGTTCAGT-CATTCGGCTCACCTGGCTAATTGCCCAAG------------------CCACCAAGTTGGCACACACACTAATTGCT-CTTTTGTTTATGTTGTTAC-----TAATTTG-T--TG---GCT-------T--------------------------------TAT--CTTCT---TT----------C--CGCACGCCAGTTGA------------TGCAAGATGCCGCCCAACGCCCAAGCCGGTGCCCAGTCCATCTCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GACGACGAAT----------------------------GCTAAA--CAACACGGCTGG-----------------------CCTCAAGGTGTAAGCAATAGAGAC--AGGT--CTGCAAATGGCAGCAATAAAA----ACTTGGAGTCGCTGCCTTCTGCCTCCAC-CCAAAGCGTGTCAAGTCCAAA---------------AGCTAATTGCTTAACCCCTCCGAATGCTGGTAA------------C-AAAACACTAATTAA--------------------------ATTGTTA-T--TT---TCTTGT----------------------------------------------T---TT---------ACT-----TGAAGGTTGA------------TGCAATATGCCGCCCAACGCCCATGCCGGTGCCCAGTCCATCACGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATGCCGGTGCCCAGT........1911.0010010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCAACGCCCATGCCG.................1811.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGCCCATGCCGGTGCCC...........2011.0010100000000
..............................................................................................................................CAATAAAA----ACTTGGAGTCGCTGC.......................................................................................................................................................................................................................................................................................................2311.0010010000000
droPer2
GACGACGAAT----------------------------GCTAAA--CAACACGGCTGG-----------------------CCTCAAGGTGTAAGCAATAGAGAC--AGGT--CTGCAAATGGCAGCAATAAAA----ACTTGGAGTCGCTGCCTTCTGCCTCCAC-CCAAAGCGTGTCAAGTCCAAA---------------AGCTAATTGCTTAACCCCTCCGAATGCTGGTAA------------C-AAAACACTAATTAA--------------------------ATTGTTA-T--TT---TCTTGT----------------------------------------------T---TT---------ACT-----TGAAGGTTGA------------TGCAATATGCCGCCCAACGCCCATGCCGGTGCCCAGTCCATCACGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................................T---TT---------ACT-----TGAAGGTTGA------------TGCAA........................................2111.001010000
..........................................................................................................................................................................................................................................................................................................................................................................TT---------ACT-----TGAAGGTTGA------------TGCA.........................................1911.001001000
droWil2
------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAC-CCAAAGCATGTCAAGTTCAAA-CAAACAATTTGCATAGCTAATTAAC--------------------------------------------------A-GTTAAATTTAATTGTTTAA-----ATGTTTA-T--TG---TTG-------T--------------------------------GTT--TTTT-----------------T-----TTACAGCTGC------------TGCAATATGCCACCGAATGCTCATGCCGGTGCCCCGTCCATAACGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCATGCCGGTGCCCCGT........2012.00200020
......................................................................................................................................................................................................................................................................................................TTA-T--TG---TTG-------T--------------------------------GTT--TTTT-----------------T-----TTACA..............................................................2311.00101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATGCCGGTGCCCCGTC.......1911.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCCGGTGCCCCGTCC......1811.00101000
......................................................................................................................................................................................................................................................................................................................................................................................................................AATATGCCACCGAATGCTCATGCCG.................2511.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCATGCCGGTGCCCCGTC.......2011.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCACCGAATGCTCATGCCGGT...............2411.00101000
.............................................................................................................................................................................................................................................................................................................................................................GTT--TTTT-----------------T-----TTACAGCTGC------------TGC..........................................2111.00101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ATATGCCACCGAATGCTCATGCCGGT...............2611.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGCTCATGCCGGTGCC............1911.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCTCATGCCGGTGCCCCGT........2211.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................CCGAATGCTCATGCCGGTGCC............2111.00100001
................................................................................................................................................................................................................................................................................................................................................................................................................................CGAATGCTCATGCCGGTG..............1811.00101000
................................................................................................................................................................................................................................................................................................................................................................................................................................CGAATGCTCATGCCGGTGCCCC..........2211.00100010
droVir3
GT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------GGTTTT--TT----------GTTGCAG-----CAACTGGTGC------------CACAATATGCCGCCCAACGCAACCGCCGGAGGGCAGTCGATTACCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGCAACCGCCGGAGGGC...........2014.004101000000100000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGCAACCGCCGGAGGGCAGT........2314.004001000000200000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAACCGCCGGAGGGCAGT........2213.003001000000100000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCGCCCAACGCAACCGCCGGAGGGC...........2813.003000100000000000001000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACGCAACCGCCGGAGGGC...........2112.002100000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACGCAACCGCCGGAGGGCAGT........2412.002000200000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCCCAACGCAACCGCCGGAGGGCAGT........2912.002000000000000000001000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCAACGCAACCGCCGGA...............2012.002001000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACCGCCGGAGGGCAGTC.......2012.002000000000000001100000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAACCGCCGGAGGGCAGT........2012.002000000000000000000000000000000010000000000000000000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGCCGGAGGGCAGTCGAT....2011.001000000000000000000000000000000001000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCAACGCAACCGCCGGAGGGCAGT........2711.001000000000000000100000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACGCAACCGCCGGAGG.............1911.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ATATGCCGCCCAACGCAACC.....................2011.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAACGCAACCGCCGGAGGGC...........2311.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................CACAATATGCCGCCCAACGCAAC......................2311.001000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAACCGCCGGAGGG............1811.001010000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACCGCCGGAGGGCAGTCG......2111.001000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCCCAACGCAACCGCCGGAGGGC...........2611.001000000000000000000000000000000001000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAACCGCCGGAGGGCA..........2011.001000000000000000100000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCGCCGGAGGGCAGTCGA.....2111.001000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CAG-----CAACTGGTGC------------CACAATATG....................................2211.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGCCGGAGGGCAGT........1711.001000000000000000000000000000000000000000000000000000000000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGGAGGGCAGTCGATTACC2211.001000000000000000000000000000000000001000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GC------------CACAATATGCCGCCCAACGC.........................2211.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGCCGGAGGGCAGTCGATTAC.2411.001000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCCCAACGCAACCGCCGGAGGGCA..........2711.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AATATGCCGCCCAACGCAACC.....................2111.001000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................C------------CACAATATGCCGCCCAACG..........................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAACCGCCGGAGGGCAGTC.......2311.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGGAGGGCAGTCGATTACC2111.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCGCCCAACGCAACCGCCGGA...............2411.001000000000000000000000000000001000000000000000000000000000000000
droMoj3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCGTGTCAAGTTCAGCTTAGTCAATTTGTTTAACTAATTGCGCAAT------------------GCATTAATTTAA-------------------------------------------AATTTA-A--TG---TCTTTTTATTC--------------------------------TCT--GTC------------TC-----TTTCACTACAGCTGGTACCAACACTAACACACTATGCCGCCCAACGCAACCGCTGGAGGCCAGTCGATTACTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................ACTAACACACTATGCCGCCC..............................2011.001100000
droGri2
AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGTGTCAAGTTCAGCTTAGCCAAATTACTTAGTTAATTGTCTT-G------------------CCCCAGAATTTACTTGAAAGCT-------------------------------------AA-A--AG---TGT-----------------------------------------TTCTT--TT----------TTTT--------AAGCAGTTGGTAC---------AACAGAATGCCGCCAAACGCCACCGCTGGAGGCCAGTCGATAACCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCCACCGCTGGAGGCCA..........2012.00220
.................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGCCACCGCTGGAGGCC...........2011.00110
.................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGCCACCGCTGGAGGCCAGTCG......2511.00110
.................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGCCACCGCTGGAGGCCAGTC.......2411.00110
..................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCCACCGCTGGAGGCCAGT........2211.00101
.......................................................................................................................................................................................................................................................................................................................................................................................................................GAATGCCGCCAAACGCCACC.....................2011.00110
.............................................................................................................................................................................................................................................CCCAGAATTTACTTGAAAGCT-------------------------------------.........................................................................................................................................................2111.00101
...................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCCACCGCTGGAGGCCAGTC.......2211.00110
droAna3
GGCGATGAA---------------------------------A-----------------------------------ACAACTCGCG-T-TAGGCAAGAATGGCAAAGGTGTC--CGTCCG---GTCACAA-------TTTAGACTCAC------------CTGC-CGAAAGCGTGTCAAGTTCAGAT--------------AGCTAATTGCTCAAA------------------ACACCAACATTGC--ATACACTAATTGCT-CTTTTGTTTATATGTTTCT-----TTGCTTG-G--TA---TTG-------CG--------ACTTGGAGCTTGCGACTAAATT-ATACTT--TT----------TTTTAAC-----TCACAGTTGA------------CGCAAGATGCCACCCAACGCCCATGCCGGAGCCCAGTCCATCACGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCCCATGCCGGAGCCCA..........2012.002200000
....................................................................................................................................................................................................................................................................................................................................................................................................TGA------------CGCAAGATGCCACCCAAC...........................2112.002200000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCCCATGCCGGAGCCCAGC........2211.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................AAGATGCCACCCAACGCCCAT.....................2111.001010000
.......................................................................................................................................................................................................................................................................................GTTTCT-----TTGCTTG-G--TA---TT............................................................................................................................................1811.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................CCACCCAACGCCCATGCCGGAGCCCAGTC.......2911.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCCCATGCCGGAGCCCAGTCCA.....2411.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGCCCATGCCGGAGCCCAGTC.......2411.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATGCCGGAGCCCAGTCCATCAC.2611.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGCCCATGCCGGAGCCCA..........2111.001000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATGCCGGAGCCCAGTCC......2111.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCCCATGCCGGAGCCC...........1811.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGGAGCCCAGTCCATCACG2211.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................AGTTGA------------CGCAAGATGCCACCC..............................2111.001000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATGCCGGAGCCCAGTCCATCA..2511.001000001
droBip1
GGCTAAGAAT-----------GG-CAAA---------------------------------------------------------GGTGT-----------------------CC------G---GTCACAA-------CTTAGACTCAC------------CTGC-CGAAAGCGTGTCAAGTTCAGAT--------------AGCTAATTGCTCAAA------------------ACACCAACATTGC--ATACACTAATTGCT-CTTTTGTTTATGTATTTT----------------------GCA-------TTGCCTTGTT---------TTGCGACTAAACTATAA--TTTT-------------TTAAC-----CCACAGTTGA------------CGCAAGATGCCACCGAACGCCCATGCCGGAGCCCAGTCCATTACGSizeHit CountTotal NormTotal
No Reads
droKik1
C------------------------------------------------------------------------------CTCCT---------------------------------------------------------------------------------C-GGAAAGCGTGTCAAGTTCAACT---------GGCTTGGCTAATTGCCCAAT------------------TCACCGAGTTGGCTC--ACACTAATTGCT-ATTTTGTTTATTTCTTTATGCCAATAACTAACAAGTGTTTTTG-------TT-------------------------------GCTCTC--TT----------CCCTCAC-----CTGCAGTTGA------------TGCAAAATGCCGCCCAACGCCCAGGCCGGTGCCCAGTCCATTACGSizeHit CountTotal NormTotal
No Reads
droFic1
GAATTA------------AATATCCAAAGGG------TACTCAACTCG------------------------------GCACCTC----------------------------------------------------------AAATCAC------------TTCCCAAAAAGCGTGTCAAGTTCAGCT----------AGCTGGCTAATTGGCCAAG------------------CC---------------ACACTAATTGCT-ATTTTGTTTGTTTCGTTAC-----TGACTTG-T--TT---TTT-------CT-------------------------------TCT--C--TTTTT--ATGTATTATTAC-----TGACAGTTGA------------TGCAAAATGCCGCCCAACGCCCAACAAGGTGCCCAGTCCATCACGSizeHit CountTotal NormTotal
No Reads
droEle1
GAATTT------------AGTAT-GAAAGGGTACGGACACTCGACTTGAC--------------------TCGAC--GGCACCTCGGGGT-----------------------CT------G---GCCATAAAGAGCTGTTT-AAATCGC------------CTCC-CAAAAGCGTGTCAAGTTCAGCT--------------GGCTAATTGCCCAAG------------------CCACCAAGTTGGCGCACACAGTAATTGCT-ATTTTGTTTATTTCGTTAC-----TGACGTG-T--TG---T-T-------T--------------------------------CAT--CTTTT---TT-------CCCAC-----CAACAGTTGA------------TGCAAGATGCCGCCCAACGCCCAAGCCGGTGCCCAGTCCATCACGSizeHit CountTotal NormTotal
No Reads
droRho1
GAATTT------------AGTAT-CAAAGG-TTCGGGTACTCGTCTTGAC--------------------TCGAC--GACACCTCGGGGT-----------------------CT------G---GCCATAAAGAGCTGCTC-GAATCAC------------CTCC-CCAAAGCGTGTCAAGTTCAACA--------------AGCTAATTGCCCAAG------------------CCACCAAGTTGGCA--CACACTAATTGCT-ATTTTGTTTATTTCGTTGC-----TAACTTT-T--TG---T-T-------T--------------------------------TTT--CTTTT---TT-------CCCAC-----CGACAGTTAA------------TGCAAGATGCCGCCCAACGCCCAAGCCGGTGCCCAGTCCATCACGSizeHit CountTotal NormTotal
No Reads
droBia1
CTCGACCACT-----------------------------------------------------------------TGAACACCTCGGGGT-----------------------CG------G---GCCATAAAGAGCTGCTCGGCTTCAC------------CTCC-CCAAAGCGTGTCAAGTTCAGCT----------GGCTGGCTAATTGCCCAAG------------------CCACCAAGTTGGCTCACACAATAATGGCT-CTTTTGTTGATTTCGTTAC-----TAAAGTG-A--TGTTTATT-------TT-------------------------------CCT--CTTT------ATGT-TCCTAAC--CGACAACAGTTGA------------TGCAAGATGCCGCCCAACGCACAAGCCGGTGCCCAGTCCATCACGSizeHit CountTotal NormTotal
No Reads
droTak1
GAATTT------------AATAT-CAAAAGG------TACTCA-------------------------------C--GACACCTCGGGGTCT---------------------CT------G---GCCATAAAGAGCTGCTCGGAATCAC------------CTCC-CCGAAGCGTGTCAAGTTCAGCT--------------GGCTAATTGCCCCAG------------------CCACCAAGTTGGCTCACACACTAATTGCT-CTTTTGTCTATTTCGTCAC-----TAACATA-C--TGTTTGCT-------TTGCTCTTTT---------TTTT----------GTTGTT--GT----------TTCTAAC-----CCACAGTTGA------------TGCAAGATGCCGCCCAACGCCCAAGCCGGTGCCCAGTCCATCACGSizeHit CountTotal NormTotal
No Reads
droEug1
C------------------------AAAGGG------AACTCAACGCA------------------------------ACACCTCGGGGT-----------------------CT------G---GTCATAAATAGCTTCTCGGAATCAC------------CTCCCCAAAAGCGTGTCAAGTTCAGAT--------------GTCTAATTGCCGAAG------------------CCACCAAGTTGGCACACACACTAATTGCTTATTTTGTTTATTATGTTAC-----TAACTTA-T--TG---TGT----------------------------------------TGT--TTTTT---TT-----------------CAACAGTTGA------------TGCAAGATGCCGCCCAACGCCCAAGCCGGTGCCCAGTCCATCACGSizeHit CountTotal NormTotal
No Reads
dm3
GAATATGCATATGTACACAATAT-CAAAGGG------TACTCCACTCAACTCAACTCA----------GCTCGACTGGACACCTCGGGGT-----------------------CT------G---GCCATAAAGAGCCGCTCGGAGTCAC------------CTAG-CCAAAGCGTGTCAAGTTCAGT-CATTCTGCTCACCTGGCTAATTGCCCAAGTCA---------------CCACCAAGTTGGCACACACACTAATTGCT-CTTTTGTTTATGTCGTTAC-----TAATTTG-T--TG---GTT-------T--------------------------------TAT--CTTTT---TT----------ACTCGCACACCAGTTGA------------TGCAACATGCCGCCCAACGCCCAAGCCGGTGCCCAGTCCATCTCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................GA------------TGCAACATGCCGCCCAACGCCC.......................2417.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCGCCCAACGCCCAAGCCGG................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................CAGTTGA------------TGCAACATGCCGCCC..............................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AGTTGA------------TGCAACATGCCGCCC..............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTGA------------TGCAACATGCCGCCCAACGCCCAA.....................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ACATGCCGCCCAACGCCCAA.....................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TGA------------TGCAACATGCCGCCCAA............................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TGGACACCTCGGGGT-----------------------CT------G---...................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GTTTATGTCGTTAC-----TAATTTG-......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................................................................................................GCT-CTTTTGTTTATGTCGTTAC-----..............................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CACTCAACTCAACTCA----------GCT.........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................AGTCAC------------CTAG-CCAAAGCG.................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCCCAAGCCGGTGCC............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................AATTGCT-CTTTTGTTTATGTC........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ACATGCCGCCCAACGCCCA......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CCCAACGCCCAAGCCGGTGCC............2111.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................AT--CTTTT---TT----------ACTCGCACACCA..............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................AAGAGCCGCTCGGAGTCAC------------CTAG-.........................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCCCAAGCCGGTGCCCA..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGCCGGTGCCCAGTCCATCTCA2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCCCAAGCCGGTGCCCAGTCCA.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCCCAAGCCGGTGCCCAGTCC......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................AAGCGTGTCAAGTTCAGT-C..................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCGCCCAACGCCCAAG....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................GA------------TGCAACATGCCGCCCAA............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCCCAAGCCGGTGCCCAGTC.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................ATAAAGAGCCGCTCGGAGTCA...........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ACACCAGTTGA------------TGCAACATGCCGCCCAAC...........................2911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACATGCCGCCCAACGCC........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................CAAAGCGTGTCAAGTTCAGT-...................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................A------------TGCAACATGCCGCCCAAC...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TGA------------TGCAACATGCCGCCCAACGC.........................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAAGCCGGTGCCCAGT........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................GGAGTCAC------------CTAG-CCAAAGCGTGTC.............................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................CCTGGCTAATTGCCCAAGTCA---------------CCACC...............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TGA------------TGCAACATGCCGCCCAACGCCC.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................ACACTAATTGCT-CTTTTGTTTATGT.........................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TGTTTATGTCGTTAC-----TAATTTG-T--TG---G.............................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AACATGCCGCCCAACGCCCAAGCCGGT...............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TACACAATAT-CAAAGGG------T..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GTTGA------------TGCAACATGCCGCC...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GTTGA------------TGCAACATGCCGCCCA.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TTGCT-CTTTTGTTTATGTCGTTAC-----T.............................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCAACGCCCAAGCCGGT...............2011.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCCGGTGCCCAGTCCATCTCA2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GCAACATGCCGCCCAACGCCCAAG....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................CTAATTGCT-CTTTTGTAA.............................................................................................................................................................................1890.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GAATATACATGTGTACACAATAT-CAAAGGG------TACTCAACTCAGC--------------------TCGACTGGACACCTCGGGGT-----------------------CT------G---GCCATAAAGAGCCGCTCGGAGTCAC------------CTAG-CCAAAGCGTGTCAAGTTCAGT-CATTCGGCTCACCTGGCTAATTGCCCAAGCCA---------------CCACCAAGTTGGCACACACACTAATTGCT-CTTTTGTTTATGTCGTTAC-----TAATTTG-T--TG---GCT-------T--------------------------------TAT--CTTCT---TT----------ACTCGCACACCAGTTGA------------TGCAAGATGCCGCCCAACGCCCAAGCAGGTGCCCAGTCCATCTCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................ATTTG-T--TG---GCT-------T--------------------------------TAT--CTTCT---TT----------ACTCGC....................................................................2812.00202000000000000000
.......................................CTCAACTCAGC--------------------TCGACTG...................................................................................................................................................................................................................................................................................................................................................................................1812.00220000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GATGCCGCCCAACGCCCAAGCC..................2211.00100000000000001000
........................................................................................................................................................................................................................................................................................GTTAC-----TAATTTG-T--TG---GCT-------....................................................................................................................................1811.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AGTTGA------------TGCAAGATGCCGCC...............................2011.00100000100000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TGA------------TGCAAGATGCCGCCCAA............................2011.00100000000000100000
droSec2
GAATATACATGTGTACACAATAT-CAAAGGG------TACTCAACTCAGC--------------------TCGACTGGACACCTCGGGGT-----------------------CT------G---GCCATAAAGAGCCGCTCGGAGTCAC------------CTAG-CCAAAGCGTGTCAAGTTCAGT-CATTCGGCTCACCTGGCTAATTGCCCAAGCCA---------------CCACCAAGTTGGCACACACACTAATTGCT-CTTTGGTTTATGTCGTTAC-----TAATTTG-T--TG---GCT-------T--------------------------------TAT--CTTCT---TT----------ACTCGCACACCAGTTGA------------TGCAAGATGCCGCCCAACGCCCAAGCCGGTGCCCAGTCCATCTCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................................................................GTTGA------------TGCAAGATGCCGCCCA.............................2112.0020002
..................................................................................................................................................................................................................................................................................................................................................................................................GTTGA------------TGCAAGATGCCGCC...............................1911.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGATGCCGCCCAACGCC........................2011.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................AGTTGA------------TGCAAGATGCCGCCC..............................2111.0010010
.............................................................................................................................GCCATAAAGAGCCGCTCGGAGTCA...........................................................................................................................................................................................................................................................................................................2411.0010010
...............................................................................................................................CATAAAGAGCCGCTCGGA...............................................................................................................................................................................................................................................................................................................1811.0011000
..................................................................................................................................................................................................................................................................................................................................................................................................GTTGA------------TGCAAGATGCCGC................................1811.0010010
droYak3
GAATAT--------ACACAATAT-TTAAGGG------TACTCAAATCAACACAGCTTAGCTCAGCCCAGCTCGACTGGACACCTCGGGGT-----------------------CT------G---GCCATAAAAAGCCGCTTGGAATCAC------------CAAG-TCAAAGCGTGTCAAGTTCAGT-CATTCGACTCACCTGGCTAATTGCCCAAG------------------CCACCAAGTTGGCACAGACACTAATTGCT-CTTTTGTTTATGTCGTTTC-----TAATTTG-T--TG---GCT-------T--------------------------------TGA--CTTCT---TT----------C--CGCACGCCAGTTGA------------TGCAAGATGCCGCCCAACGCCCAAGCCGGTGCCCAGTCCATCTCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................CT-------T--------------------------------TGA--CTTCT---TT----------C--CGCACGCC...............................................................2211.00110000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GTTGA------------TGCAAGATGCCGCC...............................1911.00100000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCCCAAGCCGGTGCCCAGTC.......2311.00100100000000
....................................................................................................................................................................................................................................................................................TGTCGTTTC-----TAATTTG-T--TG---GCT-------T--------------------------------TGA--C.............................................................................................2711.00101000000000
..........................................................................................................................................................................................................................................................................................................T--TG---GCT-------T--------------------------------TGA--CTTCT---TT----------C--CGCACGCCAG.............................................................2811.00101000000000
.......................................................................CGACTGGACACCTCGGGGT-----------------------CT------G---GCCATA.............................................................................................................................................................................................................................................................................................................................2811.00100100000000
...................................................................................................................................................................................................................................................................................................AATTTG-T--TG---GCT-------T--------------------------------TGA--CTTCT---TT----------C--CGC....................................................................2711.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................AGTTGA------------TGCAAGATGCCGCCC..............................2111.00100000010000
droEre2
GAATAT--------ACACAATAT-CAAAGGG------TACTCAACTCAACTCAGCTCA----------GCTCAACTGGACACCTCGGGGT-----------------------CT------G---GCCATAAAAAGCCGCTCGGAATCAC------------CTAG-TCAAAGCGTGTCAAGTTCAGT-CATTCGGCTCACCTGGCTAATTGCCCAAG------------------CCACCAAGTTGGCACACACACTAATTGCT-CTTTTGTTTATGTTGTTAC-----TAATTTG-T--TG---GCT-------T--------------------------------TAT--CTTCT---TT----------C--CGCACGCCAGTTGA------------TGCAAGATGCCGCCCAACGCCCAAGCCGGTGCCCAGTCCATCTCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................GTTGA------------TGCAAGATGCCGCCC..............................2013.0031100100
......................................................................................................................................................................................................................................................................................................................................................................................................A------------TGCAAGATGCCGCCCAACGCCCAAGCC..................2812.0020200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCCCAACGCCCAAGCC..................2011.0010100000
............................................................................................................................................................................................................................................................CACACTAATTGCT-CTTTTGT...............................................................................................................................................................................2011.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCCCAAGCCGGTGCCCAGC........2211.0010100000
.....................................................................................................................................................................................................................................................................................................................................................................................................GA------------TGCAAGATGCCGCCCAAC...........................2011.0010001000
...................................................................................................................................................................................................................................................................ATTGCT-CTTTTGTTTATGTTGTTAC-----T.............................................................................................................................................................2611.0010100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAACGCCCAAGCCGGT...............1911.0010001000
........................................................................................................................................................................................................................................................................................................................................................................................................................GATGCCGCCCAACGCCCAAGCCGGT...............2511.0010100000
...................................................................................................................................................................................................................................................GTTGGCACACACACTAATTGCT-C.....................................................................................................................................................................................2311.0010100000
...............................................................................................................................................................................................................................................................................................................................................................................................CCAGTTGA------------TGCAAGATGCCGCC...............................2211.0010001000
....................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGATGCCGCCCAACGCCCAAGCC..................2611.0010001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGATGCCGCCCAACGCCCAAGCC..................2311.0010100000
....................................................................................................................................................................................................................................................................................................................................................................................................TGA------------TGCAAGATGCCGCCCAAC...........................2111.0010001000
...................................................................................................................................................................................................................................................................................................................................................................................................TTGA------------TGCAAGATGCCGCCCAACGC.........................2411.0011000000

Generated: 05/17/2015 at 10:14 PM