ID:

dps_360

 Coordinate:

2:4921069-4921219 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.6 -17.6 -17.4

Flybase annnotation

exon [dpse_GLEANR_5046:2]; CDS [Dpse\GA19565-cds]; intron [Dpse\GA19565-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GAGTCGCGATAAGTCGCACTGATTGGATAGAATGTTATAAAAGCCCAGCCACTCGCCTTCACATAGTTTAGTCTGTTTCAGATTTTCAAATTGAACACAAACTTGGGATAACCTACCTTCAGAAAGGATTCACTATGCAAAAAAGTATGTTGGTACTCATTTCGAATTATTCATATTTACAAAATTAAATATCCTTTGCAGCTCTTTTGATATTCCTTGGGCTCTTGGGTGTGTGCTGGAGCGCCAGCCTT
**************************************************...........((((((..((((((...))))))((((...))))........((((....))))((((....))))....))))))......(((((....)))))...............(((((((......))))))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M059
embryo
 M040
female body
 GSM343916
embryo
 SRR902012
CNS imaginal disc
 GSM444067
head
...............................................................................................................................................................................................................................CTTGGGTGTTTGCTGGCG.......... 18 2 6 2.67 16 0 16 0 0 0
.........................................................................................ATTGAACACAAACTTGGGATAAC........................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0
........................................................................CTGTTTCAGATTTTCAAATTGAAC........................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0
...........................................................................................................................................................................................................CTTTTGATATTCCTTGGGCTCTTGGGT..................... 27 0 1 2.00 2 0 0 0 2 0
..................................................................................................AAACTTGGGATAACCTACCTTCAGA................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
.........................................................................................ATTGAACACAAACTTGGG................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0
..........................................................................................TTGAACACAAACTTAGGAT.............................................................................................................................................. 19 1 1 1.00 1 0 0 1 0 0
................................................................................................................................................................................................................GATATTCCTTGGGCTCTTGG....................... 20 0 1 1.00 1 0 1 0 0 0
.........................................................................................ATTGAACACAAACTTGGGATAACCTA........................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................AAAACTCTTTTGATATTCCTTGGGCT............................ 26 3 1 1.00 1 1 0 0 0 0
.......................................................................................AAATTGAACACAAACTTGGG................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................................ATATTCCTTGGGCTCTTGGGTGTGTG................ 26 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................CTTTTGATATTCCTTGGGCTCT.......................... 22 0 1 1.00 1 1 0 0 0 0
........................................................................................AATTGAACACAAACTTGGGATAAC........................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.........................................................................................AGTGAACACAAACTTGGGATAACCTACCT..................................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................TGGATATTCCTTGGGCTC........................... 18 1 1 1.00 1 1 0 0 0 0
...........................................................................................................................AAGGATTCACTATGCAAAAAACTCTTTT.................................................................................................... 28 3 1 1.00 1 1 0 0 0 0
.....................................................................................................CTTGGGATAACCTACTTTCAGAAAGG............................................................................................................................ 26 1 1 1.00 1 1 0 0 0 0
........................................................................CTGTTTCAGATTTTCAAATTGA............................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0
.......................................................................................................................................................................................................................CTTGGGCTCTGGGGGGAGT................. 19 3 20 0.35 7 0 6 0 0 1
......................................................................................................................................................................................................................CCTTGGGCTCTGGGGGGAGT................. 20 3 12 0.17 2 0 2 0 0 0
...............................................................................................................................................................................................................................CTTGGGTGCTTGCTGGAG.......... 18 2 6 0.17 1 0 1 0 0 0
........................................................................................................................................................................................................................TTGGGCTCTGGGGGGTGT................. 18 2 7 0.14 1 0 0 0 0 1
.......................................................................................................TGGGATAAACCACCTTCAGG................................................................................................................................ 20 3 8 0.13 1 0 0 1 0 0
.............................................................................................AACACAATTTTGGGATCACC.......................................................................................................................................... 20 3 11 0.09 1 0 1 0 0 0
......................................................................................................................................................................................................................CCTTGGGTTCTGGGGGGTGT................. 20 3 12 0.08 1 0 1 0 0 0
......................................................................................................................................................................................................................CTTTGGGTTCTGGGGTGTGT................. 20 3 20 0.05 1 0 0 0 0 1
...............................................................................................................................................................................................................................CTTGGGTGCTTGCTGGAGG......... 19 3 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

CTCAGCGCTATTCAGCGTGACTAACCTATCTTACAATATTTTCGGGTCGGTGAGCGGAAGTGTATCAAATCAGACAAAGTCTAAAAGTTTAACTTGTGTTTGAACCCTATTGGATGGAAGTCTTTCCTAAGTGATACGTTTTTTCATACAACCATGAGTAAAGCTTAATAAGTATAAATGTTTTAATTTATAGGAAACGTCGAGAAAACTATAAGGAACCCGAGAACCCACACACGACCTCGCGGTCGGAA
**************************************************...........((((((..((((((...))))))((((...))))........((((....))))((((....))))....))))))......(((((....)))))...............(((((((......))))))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 GSM343916
embryo
...................................................................................................................................................................................................AACGTCGACAAAACTTTAAGTA.................................. 22 3 1 1.00 1 1 0 0
............................................................................CAGTTTAAAAGTTTAACTT............................................................................................................................................................ 19 2 20 0.15 3 0 3 0
....................................TATTGTCGGGTCGGTGCG..................................................................................................................................................................................................... 18 2 10 0.10 1 1 0 0
..........................................................................................................................................................................AGTACATATGGTTTAATTTAT............................................................ 21 3 14 0.07 1 1 0 0
.....................................................................................AGCTTAACTTGTGTTTGG.................................................................................................................................................... 18 2 14 0.07 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:4921019-4921269 + dps_360 GA------GTCGCGATAAGTCGC---------AC---------------TGATTGGATA------GAATGTTATAAAAGCCCAGCCACT-CGCCTTCACATAGTTTAGTCTGTTTCAGATTTTCAAATTGAACACAAACTTGG----GATAACCTACCTTCAGAAAGGATTCACTATGCAAAAAAGTAT--G----TTGGTACTCATTTCGAATTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATATTTACAAAATT---AAATATC-CTTTGCAGCTCTTTTGATATTCCTTGGGCTCTTGGGTGTGTGCTGGAGCGCCAGCCTT---------------------------------
droPer2 scaffold_19:618933-619183 + dpe_944 GA------GTCGCGATAAGTCGG---------AC---------------TGATTGGATA------GAATGTTATAAAAGCCCAGCCACT-CGCCTTCACATAGTTTAGTCTGTTTCAGATTTTCAAATTGAACACAAACTTTG----GATAACCTACCTTCAGAAAGGATTCACTATGCAAAAAAGTAT--G----TTGGTACTCATTTCGAATTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATATTTACAAAATT---AAATATC-CTTTGCAGCTCTTTTGATATTCCTTGGGCTCTTGGGTGTGTGCTGGAGCGCCAGCCTT---------------------------------
droWil2 scf2_1100000004943:2846811-2846965 + CA------AT---GATAAGTGCTCAAGATTATAG---------------TATGGGGAAA------AAATGTAATAAAAACCATGGCGCT-TGACGCAAGACAATTTAGTCAATTGTCGATTTTTCGATTGTAAAAAGAGTGAAATTCAATAATAAAA---GTTGAAGAATTCATCATGAAAATAGGTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13047:11854223-11854436 - CA------GGTTTAAAGATGAAA---C---ATAGTTTCGAAATAACGACGAATGTG--------------------------------------------------------------------------------------------------TTTTTTTTT-----------------------------------------------------------------------------------------------------------------------------AAGTTATTTACAAT------------------GTAAA--------------------------GCCTGTGGCTCTTTATTA-------------------------------------ATACAAGTATTTACGTATTGAAATTT---CTGTTTT-ACCCACAGTTTTTCTGATATTTCTTGGCCTATTAGCGCTCAGCAGTGCTACCACCCTCTATACGGAGGCGGAAGAGTCCACATCTGATCCC
droMoj3 scaffold_6540:29921184-29921275 + AC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATATTTTGACAATA---ATAAACT-CTTCACAGTTATATCAATATTCCTTGGCCTCTTGGCGCTCAGCTGCGCTGCCAGCTTGTACCTGGAC------------------------
droAna3 scaffold_13340:16771407-16771721 + AA------GTCCCGATAAGTACC----------A---------------CGATCAGCTA------GAATGTTATAAAAGCCACAACGCT-GGACTAAAAATCGTTTAGTCAGTGTTTAATTTTTCCCCTGAAAAGAAGTT--------------------TGGAATAGATCTACTATGCAAAAAGGTAA--ACTTACCCAGTAA---AT----ACATTTTTA---------------GATTTTTC------CTGTGGATTATTAGGAATTTAACTGAA--A-------A------------------GGATGATTGCTGTTA--------TAAAATTTTGGAGCAAAAAGAAAAAA---------TTCA-------------------------------------TCTATATAGATTCCAAATTGTTTAT--------TTATCGTTTTAGGTTACCTGATTTTCGCGGGTCTTTTGGTTTTCGCCTATGTT------------------------------------------
droBip1 scf7180000396424:286745-287042 + AA------GTCCCGATAAGTACC----------A---------------CGATCGGGTG------GAATGTTATAAAAGCCATAACGCT-GGCCTAAGAATCGTTTAGTCAGTGTTTAATTTTTCCCCTGAAAAGAAGTT--------------------CGGAAAGGATCTACTATGCAAAAAGGTAA--ACTTCAGCAGTAA---ACTGGAGCAT----------T--TTTTTCAGATTTTCC------ATATGGATTATTAGGAATACGT-CAAAAAA-------A------------------GGATCATTGCT-------------------------------------------GTTAATAC-------------------------------------TTAAAGTTGTTAACGGTTTGAT----------AATT-CTTTGTAGGTTACCTGATTTTCGCGGGACTTTTGGTTCTGGCCTACGCCGCCA--------------------------------------
droKik1 scf7180000302253:125379-125722 + GA------GTCCCGATAAGTTTC----------C---------------CGATTGGATA------GAATGTTATAAAAGCCCAGGTACT-GGCCTCAACATCGTTTAGTTTGTCTTAAATTTTTGAATCGAAAGGAAGTA--------------------ACAAAAGGATTCAACATGCTGAAAGGTAA--CTAAGAGA-------------------TCCA---------------GATTCCTTGTGTCTAAATGGAGATAATTAAA--------------------TATACATTT--AGCATCTAGGATATATCTTGTTC--------TCAATATT--------AATTAAAAAG---------TTCATAGAACTTCATTTCAAGTTTAAAAAATTGGCATTATCTTAAAGTTACTAACCA------------CAAATGCC-CTTTGCAGCCCTCGTGATCTTCTTCGGCCTCTTGGCCCTAGCCATTGCTGCCTCC------------------------------------
droFic1 scf7180000454055:2456886-2457010 - ------------CGATAATGGGG---------CT---------------TGATCGGATA------GTATGTTATAAAAGCCCTGACACT-GGCCTGCCCATCGTTTAGTCTGCCTTTAATTTTTGAACCAAAAAGAAGCT--------------------ACTAGAGGATACACCATGCTGAAAGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491280:591174-591298 - ----------CCCGATAAGCTGC----------C---------------TGATCGCATT------GAATGTTATAAAAGCCCAGGTGCT-GGCCT-CAAATCTCTTAGTCTGTGTTTAATATTTGAATCGAGAAGAAGCG--------------------TTTAAAGGATCCACCATGCTAAAAGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000758153:953-1109 - GA------ATCCCGATAAGTTGC----------C---------------TGATCGGATA------GAATGTTATAAAAGCTCAGGCGCT-G-CCTTCCACTCGTTCAGTCTGTTATTAATTTTTGAATCGAAAAGAAGCT--------------------ATTAAAGGATTCACCATGCTGAAAGGTAA--ACAACTTGAAAGTTAATCTGAATTAT----------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302113:2812348-2812477 - GG------GTCCCGATAAGTTGC----------C---------------CGATCGGATA------GAATGTTATAAAAGCCCGGGCGCC-GGTCTTCCAGTCGCTTAGTCTGTCTTAAAATCTTGAACCGAAAAGAAGCT--------------------ACCAAAGGATACAACATGCTGAAAGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415286:592452-592581 - GA------GACCCGATAAGTTGC---------CC---------------CGATCGGATA------GAATGTTATAAAAGTCCAACCGAT-CGCCTTCTAGTCGT-TAGTCTGTGTTAAATTTTTGAAACGAAAAGAAGCT--------------------ACCAAAGGATACACCATGCTGAAAGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409682:27462-27591 + GA------GTCCCGATAAGTTGC----------C---------------CGATCGGATA------GAATGTTATAAAAGCCAAGTCTGTTGGCCT--AGTCTGTTTAGTATGTCTTAAATTTTTGAATTGTAAAGAAGTT--------------------TTTAAAGGATTCACCATGCTGAAAGGTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3R:22561772-22562093 - AA------GTCCCGATAAGTTGC----------C---------------CGATCGGATACTCGTTGAATGTTATAAAAGTCCAATCAGT-GGCCTTCCATTCGTTTAGTCTGCGTTAAATTTTTGAATCGAGAAGAAGCT--------------------GATAAAGGAATCACCATGCTGAAAGGTAA--ACATCCTTAGGAA---TA----ATCTACTCAACTATAGTGCGTTCG--------------------ATAAAGTGAATTTCTA-------------------------------------------------GAATATTATCACATTTCCTGGAACTATGAGTTTGATAATCTTAATCA-------------------------------------CGCATACTATTTATCACTTGCCTAT--------TCT-CCCTGCAGCACTCATCATTTTCTTTGGCATCCTGGCTCTGGGCTATGCCGCCTCC------------------------------------
droSim2 3r:22021558-22021859 - dsi_7223 AA------GTCCCGATAAGTTGC----------C---------------CGATCGGATA------GAATGTTATAAAAGCCCAATCAGT-GGTCTTCCATTCGTTTAGTCTGCGTTAAATTTTTGTATCGAGAAGAAGCT--------------------GATAAAGGATTCACCATGCTGAAAGGTAA--ACATCCTTAGGAA---TA----ATCTACTCAACTATTGTGCGTTCG-------------------------GTGAAATTCAA-----------------------------------------------------------------CCTGGAACTATGAACCTGATAATCTTAATCA-------------------------------------CGCATACTATTAATCACTCGACTATTTTC-AAATCC-CCCTGCAGCAGTCATCATTTTCTTTGGCATCCTGGCTCTGGGCTACGCCGCCTCC------------------------------------
droSec2 scaffold_13:1335767-1336068 - AA------GTCCCGATAAGTTGC----------C---------------CGATCGGATA------GAATGTTATAAAAGCCCAATCAGT-GGTCTTCCATTCGTTTAGTCTGCGTTAAATTTTTGAATCGAGAAGAAGCT--------------------GATAAAGGATTCACCATGCTGAAAGGTAA--ACATCCTTAGGAA---TA----ATCTACTCAACTATTGTGCGTTCG-------------------------GTGAAATTCAA-----------------------------------------------------------------CCTGGAACTATGAGCTTTATAATCTTAATCA-------------------------------------CGCATACTATTAATCACTCGACTATTTTC-GAATCC-CCCTGCAGCAGTCATCATTTTCTTTGGCATCCTGGCTCTGGGCTACGCCGCCTCC------------------------------------
droYak3 3R:23933972-23934292 + AAAGTCCCGTCCCGATAAGTTGG----------C---------------CGATTGGATA------GAATGTTATAAAAAGCCACTCGGT-GGCCATTCAATCGTTTAGTCTGCGTTACATTTTTGAATCGAAAAGAAGCT--------------------GATAAAGGATTCACCATGCTGAAAGGTAAGCACATCCTTCGAAA---TA----ATCTACTCAACTGTTGTG-----------------AC---TGGCGTAAAGTGAAACTCAT-CGAA--TATTTACAAATACATTTTAAGC------------------ATATT--------------------------ACATGATAATCTTTATCA-------------------------------------CTATTACTATTAATCACTTGGATAT--------------TCGCAGGACTCATCATATTCTTTGGCCTGCTGGCTCTGTGCTACGCCGCCTCC------------------------------------
droEre2 scaffold_4820:5489312-5489661 + AA------GTCCCGATAAGTTGC----------C---------------CGATCGGATA------GAATGTTATAAAAGCCCACTCGAT-GGCCATCCATTCGTTTAGTCTGCGTTAGATTTTTGAATCGCAAAGAAGCT--------------------GCTAAAGGATTCACCATGCTGAAAGGTAA--ACATCCTTAGGAA---TA----ATCCACTCCACTACTGTGCGTTCGGTTGTG-----AC-AAAGGGACAAAGTGAAATTCAC-AGAA--T-------AATATATTTATAGC------------------TAAAATACTATCATACTTCCTAGAACTATGAACTTAATAATCTCAATCA-------------------------------------C---------TATTCACTCGGATATTCGC-TGATCCTCCCTGCAGCACTCATCATTTTCTTCGGCCTCCTGGCTCTGTGCTACGCCGCCTCC------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GA------GTCGCGATAAGTCGC---------AC---------------TGATTGGATA------GAATGTTATAAAAGCCCAGCCACT-CGCCTTCACATAGTTTAGTCTGTTTCAGATTTTCAAATTGAACACAAACTTGG----GATAACCTACCTTCAGAAAGGATTCACTATGCAAAAAAGTAT--G----TTGGTACTCATTTCGAATTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATATTTACAAAATT---AAATATC-CTTTGCAGCTCTTTTGATATTCCTTGGGCTCTTGGGTGTGTGCTGGAGCGCCAGCCTT---------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................ATTGAACACAAACTTGG----GATAAC.............................................................................................................................................................................................................................................................................................................................................................................................2312.0020020000000
.............................................................................................................CTGTTTCAGATTTTCAAATTGAAC.................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020020000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTGATATTCCTTGGGCTCTTGGGT......................................................2712.0020000000002
.......................................................................................................................................AAACTTGG----GATAACCTACCTTCAGA..................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
..............................................................................................................................ATTGAACACAAACTTGG----G..................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTCCTTGGGCTCTTGG........................................................2011.0010100000000
..............................................................................................................................ATTGAACACAAACTTGG----GATAACCTA..........................................................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
............................................................................................................................AAATTGAACACAAACTTGG----G..................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCCTTGGGCTCTTGGGTGTGTG.................................................2611.0010010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTGATATTCCTTGGGCTCT...........................................................2211.0010010000000
.............................................................................................................................AATTGAACACAAACTTGG----GATAAC.............................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
.............................................................................................................CTGTTTCAGATTTTCAAATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
droPer2
GA------GTCGCGATAAGTCGG---------AC---------------TGATTGGATA------GAATGTTATAAAAGCCCAGCCACT-CGCCTTCACATAGTTTAGTCTGTTTCAGATTTTCAAATTGAACACAAACTTTG----GATAACCTACCTTCAGAAAGGATTCACTATGCAAAAAAGTAT--G----TTGGTACTCATTTCGAATTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATATTTACAAAATT---AAATATC-CTTTGCAGCTCTTTTGATATTCCTTGGGCTCTTGGGTGTGTGCTGGAGCGCCAGCCTT---------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................AATTGAACACAAACTTTG----GAT................................................................................................................................................................................................................................................................................................................................................................................................21110.00101000000
.............................................................................................................................AATTGAACACAAACTTTG----GATAACCT...........................................................................................................................................................................................................................................................................................................................................................................................2619.009900000
................................................................................................................................TGAACACAAACTTTG----GATAACCT...........................................................................................................................................................................................................................................................................................................................................................................................2318.008800000
.................................................................................................................................GAACACAAACTTTG----GATAACC............................................................................................................................................................................................................................................................................................................................................................................................2115.005500000
..............................................................................................................................ATTGAACACAAACTTTG----GATAACC............................................................................................................................................................................................................................................................................................................................................................................................2415.005500000
................................................................................................................................TGAACACAAACTTTG----GATAACC............................................................................................................................................................................................................................................................................................................................................................................................2214.004400000
.............................................................................................................................AATTGAACACAAACTTTG----GATAACC............................................................................................................................................................................................................................................................................................................................................................................................2514.004400000
..............................................................................................................TGTTTCAGATTTTCAAATTG....................................................................................................................................................................................................................................................................................................................................................................................................................2014.004400000
..............................................................................................................................ATTGAACACAAACTTTG----GAT................................................................................................................................................................................................................................................................................................................................................................................................2014.004400000
.............................................................................................................................AATTGAACACAAACTTTG----GATAAC.............................................................................................................................................................................................................................................................................................................................................................................................2413.003300000
..................................................................................................................................AACACAAACTTTG----GATAACCT...........................................................................................................................................................................................................................................................................................................................................................................................2113.003300000
..............................................................................................................................ATTGAACACAAACTTTG----G..................................................................................................................................................................................................................................................................................................................................................................................................1813.003300000
..............................................................................................................................ATTGAACACAAACTTTG----GATAACCT...........................................................................................................................................................................................................................................................................................................................................................................................2513.003300000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTTTGATATTCCTTGGGC..............................................................2112.002200000
....................................................................................................................................................ATAACCTACCTTCAGAAAG...............................................................................................................................................................................................................................................................................................................................................................................1912.002002000
................................................................................................................................TGAACACAAACTTTG----GAT................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
.............................................................................................................................AATTGAACACAAACTTTG----...................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
...............................................................................................................................TTGAACACAAACTTTG----GATAACC............................................................................................................................................................................................................................................................................................................................................................................................2312.002200000
...........................................................................................................................CAAATTGAACACAAACTTTG----GATAACC............................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
.................................................................................................................................GAACACAAACTTTG----GATAACCTACCTT......................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
...................................................................................................................................ACACAAACTTTG----GATAACCT...........................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
...................................................................................................................................................................AAAGGATTCACTATGCAA.................................................................................................................................................................................................................................................................................................................................................................1812.002200000
....................................................................................................................................CACAAACTTTG----GATAACC............................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
....................................................................................................................................CACAAACTTTG----GATAACCT...........................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
..................................................................................................................................AACACAAACTTTG----GATAACC............................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
...................................................................................................................................ACACAAACTTTG----GATAACCTACCT.......................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
................................................................................................................................TGAACACAAACTTTG----GATAAC.............................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCTTGGGCTCTTGGGT......................................................1911.001001000
...................................................................................................................CAGATTTTCAAATTGAACAC...............................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..............................................................................................................................ATTGAACACAAACTTTG----GATAAC.............................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.....................................................................................................................GATTTTCAAATTGAACACAAACTTTG----GAT................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
................................................................................................................................TGAACACAAACTTTG----GATAACCTACCTT......................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
................................................................................................................................TGAACACAAACTTTG----GATAACCTACCT.......................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..............................................................................................................................ATTGAACACAAACTTTG----GATAACCG...........................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTCCTTGGGCTCTTGGGTGT....................................................2411.001001000
........................................................................................................................................................CCTACCTTCAGAAAGGATTCACTATGC...................................................................................................................................................................................................................................................................................................................................................................2711.001001000
....................................................................................................................................................ATAACCTACCTTCAGAAAGG..............................................................................................................................................................................................................................................................................................................................................................................2011.001001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGTGTGTGCTGGAGCGCC.......................................2111.001001000
.....................................................................................................................GATTTTCAAATTGAACACAAACTTTG----...................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
....................................................................................................................................CACAAACTTTG----GATAACCTACCT.......................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...........................................................................................................................................TTTG----GATAACCTACCTTCAGAAAGGATTC..........................................................................................................................................................................................................................................................................................................................................................................2911.001001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCCTTGGGCTCTTGGGTGTGTG.................................................2511.001100000
..............................................................................................................................ATTGAACACAAACTTTG----GA.................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATATTCCTTGGGCTCTTGGGTGT....................................................2511.001001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTCCTTGGGCTCTTGGGTGTGTG.................................................2711.001001000
................................................................................................................................TGAACACAAACTTTG----GATAACCTACC........................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
....................................................................................................................................CACAAACTTTG----GATAACCTACCTT......................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..............................................................................................................................ATTGAACACAAACTTTG----GATAACCTACCT.......................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
.........................................................................................................................TTCAAATTGAACACAAACT..........................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droWil2
CA------AT---GATAAGTGCTCAAGATTATAG---------------TATGGGGAAA------AAATGTAATAAAAACCATGGCGCT-TGACGCAAGACAATTTAGTCAATTGTCGATTTTTCGATTGTAAAAAGAGTGAAATTCAATAATAAAA---GTTGAAGAATTCATCATGAAAATAGGTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................TTTCGATTGTAAAAAGAGTG.........................................................................................................................................................................................................................................................................................................................................................................................................2015.00500050
..........................................................................................................................TTCGATTGTAAAAAGAGTGA........................................................................................................................................................................................................................................................................................................................................................................................................2015.00500050
............................................................................................................................CGATTGTAAAAAGAGTGA........................................................................................................................................................................................................................................................................................................................................................................................................1814.00400040
........................................................................................................TTAGTCAATTGTCGATTTTTCGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................2513.00300030
...............................................................................................................ATTGTCGATTTTTCGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................1813.00300030
...................................................................................................................................................AATAATAAAA---GTTGAAGAAT............................................................................................................................................................................................................................................................................................................................................................................2012.00200020
................................................................................................................................TGTAAAAAGAGTGAAATTCA..................................................................................................................................................................................................................................................................................................................................................................................................2012.00200020
....................................................................................................................................................ATAATAAAA---GTTGAAGAATT...........................................................................................................................................................................................................................................................................................................................................................................2012.00200020
.................................................................................................................................GTAAAAAGAGTGAAATTCA..................................................................................................................................................................................................................................................................................................................................................................................................1912.00200110
...................................................................................................................................................AATAATAAAA---GTTGAAGA..............................................................................................................................................................................................................................................................................................................................................................................1812.00200020
.........................................................................................................................TTTCGATTGTAAAAAGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................1912.00200110
.................................................................................................................................GTAAAAAGAGTGAAATTCAAT................................................................................................................................................................................................................................................................................................................................................................................................2112.00200020
.........................................................................................................................TTTCGATTGTAAAAAGAGTGA........................................................................................................................................................................................................................................................................................................................................................................................................2112.00200020
.....................................................................................................................GATTTTTCGATTGTAAAAAGAGTGA........................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
..............................................................................................................................ATTGTAAAAAGAGTGAAAT.....................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
........................................................................................................................TTTTCGATTGTAAAAAGA............................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
................................................................................................................................TGTAAAAAGAGTGAAATT....................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
......................................................................................................................ATTTTTCGATTGTAAAAAGAGTGA........................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
........................................................................................................TTAGTCAATTGTCGATTTTTCGAT......................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
..........................................................................................................AGTCAATTGTCGATTTTTCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
................................................................................................................................TGTAAAAAGAGTGAAATTC...................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
................................................................................................................................TGTAAAAAGAGTGAAATTCAATAATA............................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
........................................................................................................................TTTTCGATTGTAAAAAGAGTGAA.......................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
..................................................................................................................GTCGATTTTTCGATTGTAAAAAGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
.........................................................................................................................................................AAAA---GTTGAAGAATTCAT........................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.............................................................................................................................GATTGTAAAAAGAGTGAAATTCAAT................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
.....................................................................................................................GATTTTTCGATTGTAAAAAGAGTGAAA......................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
..............................................................................................................................ATTGTAAAAAGAGTGAAATTCA..................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
............................................................................................................................CGATTGTAAAAAGAGTGAAATTCA..................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
....................................................................................................................CGATTTTTCGATTGTAAAAAGAGTGA........................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
......................................................................................................................ATTTTTCGATTGTAAAAAGAG...........................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..........................................................................................................................TTCGATTGTAAAAAGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
............................................................................................................................CGATTGTAAAAAGAGTGAAATT....................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.............................................................................................................................GATTGTAAAAAGAGTGAAATTCA..................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
............................................................................................................................CGATTGTAAAAAGAGTGAAATTCAAT................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.............................................................................................................................GATTGTAAAAAGAGTGAA.......................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
...........................................................................................................................TCGATTGTAAAAAGAGTGA........................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.................................................................................................................................GTAAAAAGAGTGAAATTC...................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..........................................................................................................................TTCGATTGTAAAAAGAGTG.........................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...................................................................................................................................................................GAAGAATTCATCATGAAAATA..............................................................................................................................................................................................................................................................................................................................................................2111.00100010
..........................................................................................................AGTCAATTGTCGATTTTTCGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.........................................................................................................................TTTCGATTGTAAAAAGAGTGAAA......................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
........................................................................................................................................................................ATTCATCATGAAAATAGC............................................................................................................................................................................................................................................................................................................................................................1830.33100010
droVir3
CA------GGTTTAAAGATGAAA---C---ATAGTTTCGAAATAACGACGAATGTG--------------------------------------------------------------------------------------------------TTTTTTTTT-----------------------------------------------------------------------------------------------------------------------------AAGTTATTTACAAT------------------GTAAA--------------------------GCCTGTGGCTCTTTATTA-------------------------------------ATACAAGTATTTACGTATTGAAATTT---CTGTTTT-ACCCACAGTTTTTCTGATATTTCTTGGCCTATTAGCGCTCAGCAGTGCTACCACCCTCTATACGGAGGCGGAAGAGTCCACATCTGATCCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGCAGTGCTACCACCCT..................................2012.002001100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTACCACCCTCTATACGGA.........................2212.002002000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCACCCTCTATACGGAGGC......................2212.002000100000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTATTAGCGCTCAGCAG..............................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGAAGAGTCCACATCTGATCCC2511.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACGGAGGCGGAAGAGT..............1911.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGCGGAAGAGTCCACATCTGATC..2611.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTTCTTGGCCTATTAGCGCTC...................................................2511.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATACGGAGGCGGAAGA................1811.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCTACCACCCTCTATACGGA.........................2311.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACCACCCTCTATACGGAGGCG.....................2411.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATATTTCTTGGCCTATT..........................................................2011.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATATTTCTTGGCCTATTAGC.......................................................2311.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCTGATATTTCTTGGC...............................................................1911.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCTGATATTTCTTGGCCTATTAGC.......................................................2711.001000100000000000000000000000000000000000000000000000000000000000
.....................AA---C---ATAGTTTCGAAATAACGACGAATGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACCACCCTCTATACGGAGGC......................2311.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTATTAGCGCTCAGCAGTGCTACCACCC...................................2911.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGAAGAGTCCACATCTGATCC.2411.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATACGGAGGCGGAAGAGTC.............2111.001000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACCACCCTCTATACGGA.........................2011.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAGCAGTGCTACCACC....................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGAGGCGGAAGAGTCCAC..........2011.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTATTAGCGCTCAGCAGTG............................................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGGCGGAAGAGTCCG...........1811.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
AC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATATTTTGACAATA---ATAAACT-CTTCACAGTTATATCAATATTCCTTGGCCTCTTGGCGCTCAGCTGCGCTGCCAGCTTGTACCTGGAC------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droAna3
AA------GTCCCGATAAGTACC----------A---------------CGATCAGCTA------GAATGTTATAAAAGCCACAACGCT-GGACTAAAAATCGTTTAGTCAGTGTTTAATTTTTCCCCTGAAAAGAAGTT--------------------TGGAATAGATCTACTATGCAAAAAGGTAA--ACTTACCCAGTAA---AT----ACATTTTTA---------------GATTTTTC------CTGTGGATTATTAGGAATTTAACTGAA--A-------A------------------GGATGATTGCTGTTA--------TAAAATTTTGGAGCAAAAAGAAAAAA---------TTCA-------------------------------------TCTATATAGATTCCAAATTGTTTAT--------TTATCGTTTTAGGTTACCTGATTTTCGCGGGTCTTTTGGTTTTCGCCTATGTT------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................AGTCAGTGTTTAATTTTTCCCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................2313.003030000
.........................................................................................................................TTTCCCCTGAAAAGAAGTT--------------------TGG...................................................................................................................................................................................................................................................................................................................................................................................2212.002020000
...........................................................................................................GTCAGTGTTTAATTTTTCCCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................2212.002020000
.....................................................................................................................AATTTTTCCCCTGAAAAGAAGTT--------------------TGGA..................................................................................................................................................................................................................................................................................................................................................................................2712.002020000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGGGTCTTTTGGTTTTCGCC................................................2212.002020000
........................................................................................................................................AGTT--------------------TGGAATAGATCTACT.......................................................................................................................................................................................................................................................................................................................................................................1912.002011000
......................................................................................................................................GAAGTT--------------------TGGAATAGATCTACT.......................................................................................................................................................................................................................................................................................................................................................................2112.002020000
..................................................................................................................................AAAAGAAGTT--------------------TGGAATAGATC...........................................................................................................................................................................................................................................................................................................................................................................2112.002020000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGGGTCTTTTGGTTTTCGG.................................................2111.001010000
..................GTACC----------A---------------CGATCAGCTA------GAATGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.......................................................................................................................................................................GATCTACTATGCAAAAAGGT...........................................................................................................................................................................................................................................................................................................................................................2011.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTACCTGATTTTCGCGGGT...............................................................2111.001010000
.................................................................................................................GTTTAATTTTTCCCCTGA...................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
..........................................................................................................AGTCAGTGTTTAATTTTTCCC.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.............................................................................................................CAGTGTTTAATTTTTCCCC......................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCGCGGGTCTTTTGGTTTTC...................................................2411.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCGCGGGTCTTTTGGT.......................................................2011.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTTTGGTTTTCGCCTATGTT------------------------------------------2311.001010000
........................................................................................................................................................................ATCTACTATGCAAAAAGGTT..........................................................................................................................................................................................................................................................................................................................................................2011.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGCGGGTCTTTTGGTTTTC...................................................2211.001010000
.........................................................................................................................TTTCCCCTGAAAAGAAGTT--------------------TGGA..................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGCGGGTCTTTTGGTT......................................................1911.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGGGTCTTTTGGTTTTCGC.................................................2111.001010000
.........................................................................................................................TTTCCCCTGAAAAGAAGTT--------------------TGGAATA...............................................................................................................................................................................................................................................................................................................................................................................2611.001001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTCTTTTGGTTTTCGCCT...............................................2011.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTCTTTTGGTTTTCGC.................................................1811.001010000
.................................................................................................................................GAAAAGAAGTT--------------------TGGAATAGATCTACC.......................................................................................................................................................................................................................................................................................................................................................................2611.001010000
....................................................................................................................................AAGAAGTT--------------------TGGAATAGATC...........................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCGGGTCTTTTGGTTTTC...................................................2111.001010000
.....................................................................................................................................AGAAGTT--------------------TGGAATAGATC...........................................................................................................................................................................................................................................................................................................................................................................1811.001001000
....................................................................................................................................................................ATAGATCTACTATGCAAAAAG.............................................................................................................................................................................................................................................................................................................................................................2111.001010000
.......................................................................................................................................AAGTT--------------------TGGAATAGATCTACT.......................................................................................................................................................................................................................................................................................................................................................................2011.001001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCGGGTCTTTTGGTTTTCGCCT...............................................2511.001010000
.................................................................................................................................................................GGAATAGATCTACTATGCAAAAAGGT...........................................................................................................................................................................................................................................................................................................................................................2611.001010000
.....................................................................................................................................................................TAGATCTACTATGCAAAAAGGC...........................................................................................................................................................................................................................................................................................................................................................2211.001010000
.................................................................................................................................GAAAAGAAGTT--------------------TGGAATA...............................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.................................................................................................................GTTTAATTTTTCCCCTGAA..................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTTCGCGGGTCTTTTGGT.......................................................2111.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTTCGCGGGTCTTTTGGTT......................................................2211.001010000
....................................................................................................................................AAGAAGTT--------------------TGGAATAGAT............................................................................................................................................................................................................................................................................................................................................................................1811.001001000
........................................................................................................................TTTTCCCCTGAAAAGAAGTT--------------------TGGAATA...............................................................................................................................................................................................................................................................................................................................................................................2711.001001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGCGGGTCTTTTGGT.......................................................1811.001010000
.........................................................................................................................................GTT--------------------TGGAATAGATCTACTATGCAAA................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTACCTGATTTTCGCGGGC...............................................................2211.001010000
droBip1
AA------GTCCCGATAAGTACC----------A---------------CGATCGGGTG------GAATGTTATAAAAGCCATAACGCT-GGCCTAAGAATCGTTTAGTCAGTGTTTAATTTTTCCCCTGAAAAGAAGTT--------------------CGGAAAGGATCTACTATGCAAAAAGGTAA--ACTTCAGCAGTAA---ACTGGAGCAT----------T--TTTTTCAGATTTTCC------ATATGGATTATTAGGAATACGT-CAAAAAA-------A------------------GGATCATTGCT-------------------------------------------GTTAATAC-------------------------------------TTAAAGTTGTTAACGGTTTGAT----------AATT-CTTTGTAGGTTACCTGATTTTCGCGGGACTTTTGGTTCTGGCCTACGCCGCCA--------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GA------GTCCCGATAAGTTTC----------C---------------CGATTGGATA------GAATGTTATAAAAGCCCAGGTACT-GGCCTCAACATCGTTTAGTTTGTCTTAAATTTTTGAATCGAAAGGAAGTA--------------------ACAAAAGGATTCAACATGCTGAAAGGTAA--CTAAGAGA-------------------TCCA---------------GATTCCTTGTGTCTAAATGGAGATAATTAAA--------------------TATACATTT--AGCATCTAGGATATATCTTGTTC--------TCAATATT--------AATTAAAAAG---------TTCATAGAACTTCATTTCAAGTTTAAAAAATTGGCATTATCTTAAAGTTACTAACCA------------CAAATGCC-CTTTGCAGCCCTCGTGATCTTCTTCGGCCTCTTGGCCCTAGCCATTGCTGCCTCC------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
------------CGATAATGGGG---------CT---------------TGATCGGATA------GTATGTTATAAAAGCCCTGACACT-GGCCTGCCCATCGTTTAGTCTGCCTTTAATTTTTGAACCAAAAAGAAGCT--------------------ACTAGAGGATACACCATGCTGAAAGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
----------CCCGATAAGCTGC----------C---------------TGATCGCATT------GAATGTTATAAAAGCCCAGGTGCT-GGCCT-CAAATCTCTTAGTCTGTGTTTAATATTTGAATCGAGAAGAAGCG--------------------TTTAAAGGATCCACCATGCTAAAAGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GA------ATCCCGATAAGTTGC----------C---------------TGATCGGATA------GAATGTTATAAAAGCTCAGGCGCT-G-CCTTCCACTCGTTCAGTCTGTTATTAATTTTTGAATCGAAAAGAAGCT--------------------ATTAAAGGATTCACCATGCTGAAAGGTAA--ACAACTTGAAAGTTAATCTGAATTAT----------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GG------GTCCCGATAAGTTGC----------C---------------CGATCGGATA------GAATGTTATAAAAGCCCGGGCGCC-GGTCTTCCAGTCGCTTAGTCTGTCTTAAAATCTTGAACCGAAAAGAAGCT--------------------ACCAAAGGATACAACATGCTGAAAGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GA------GACCCGATAAGTTGC---------CC---------------CGATCGGATA------GAATGTTATAAAAGTCCAACCGAT-CGCCTTCTAGTCGT-TAGTCTGTGTTAAATTTTTGAAACGAAAAGAAGCT--------------------ACCAAAGGATACACCATGCTGAAAGGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GA------GTCCCGATAAGTTGC----------C---------------CGATCGGATA------GAATGTTATAAAAGCCAAGTCTGTTGGCCT--AGTCTGTTTAGTATGTCTTAAATTTTTGAATTGTAAAGAAGTT--------------------TTTAAAGGATTCACCATGCTGAAAGGTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
AA------GTCCCGATAAGTTGC----------C---------------CGATCGGATACTCGTTGAATGTTATAAAAGTCCAATCAGT-GGCCTTCCATTCGTTTAGTCTGCGTTAAATTTTTGAATCGAGAAGAAGCT--------------------GATAAAGGAATCACCATGCTGAAAGGTAA--ACATCCTTAGGAA---TA----ATCTACTCAACTATAGTGCGTTCG--------------------ATAAAGTGAATTTCTA-------------------------------------------------GAATATTATCACATTTCCTGGAACTATGAGTTTGATAATCTTAATCA-------------------------------------CGCATACTATTTATCACTTGCCTAT--------TCT-CCCTGCAGCACTCATCATTTTCTTTGGCATCCTGGCTCTGGGCTATGCCGCCTCC------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................................................GCT--------------------GATAAAGGAATCACCATGCT..................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................GTTTAGTCTGCGTTAAATT.............................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................ATAAAGGAATCACCATGC...................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGCATCCTGGCTCTGGGG................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................CGAGAAGAAGCT--------------------GATAAAG...............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGCTCTGGGCTATGC...........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................TTGAATCGAGAAGAAGCT--------------------......................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................GTTAAATTTTTGAATCGAGAAGAAGCT--------------------......................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GTCTGCGTTAAATTTTTGAATCGA...................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................CTGCGTTAAATTTTTGAAT......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................AATCGAGAAGAAGCT--------------------GATA..................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................TTTTGAATCGAGAAGAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................GTTTAGTCTGCGTTAAATTTTTGAATC.....................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACTCATCATTTTCTTTGGC...............................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................AATTTTTGAATCGAGAAGAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGCTCTGGGCTAT.............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................GATAAAGGAATCACCATGCTGAAA..............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGCTCTGGGCTATGCCGCCTCC------------------------------------2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................AGAAGAAGCT--------------------GATAAAGGAA............................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................TTTTGAATCGAGAAGAAGCT--------------------GATAAAGG..............................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AA------GTCCCGATAAGTTGC----------C---------------CGATCGGATA------GAATGTTATAAAAGCCCAATCAGT-GGTCTTCCATTCGTTTAGTCTGCGTTAAATTTTTGTATCGAGAAGAAGCT--------------------GATAAAGGATTCACCATGCTGAAAGGTAA--ACATCCTTAGGAA---TA----ATCTACTCAACTATTGTGCGTTCG-------------------------GTGAAATTCAA-----------------------------------------------------------------CCTGGAACTATGAACCTGATAATCTTAATCA-------------------------------------CGCATACTATTAATCACTCGACTATTTTC-AAATCC-CCCTGCAGCAGTCATCATTTTCTTTGGCATCCTGGCTCTGGGCTACGCCGCCTCC------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................GTCTGCGTTAAATTTTTGTATCGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300300000000000000
........................................................................................................................TTTTGTATCGAGAAGAAGCT--------------------G.....................................................................................................................................................................................................................................................................................................................................................................................2113.00300300000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGCTCTGGGCTACGCCGC........................................2313.00300300000000000000
..............................................................................................................................ATCGAGAAGAAGCT--------------------GATAAAGGATT...........................................................................................................................................................................................................................................................................................................................................................................2512.00200200000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGCATCCTGGCTCTGGGC................................................2212.00200100000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCTTTGGCATCCTGGCTCTGGGC................................................2712.00200200000000000000
...................................................................................................................................GAAGAAGCT--------------------GATAAAGGATTC..........................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCTTTGGCATCCTGGCTCTGGGCT...............................................2712.00200200000000000000
..............................................................................................................................ATCGAGAAGAAGCT--------------------GATAAAGGATTC..........................................................................................................................................................................................................................................................................................................................................................................2612.00200200000000000000
...........................................................................................................................TGTATCGAGAAGAAGCT--------------------G.....................................................................................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGCATCCTGGCTCTGGGCTA..............................................2412.00200100000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGCTCTGGGCTAC.............................................1812.00200200000000000000
........................................................................................................................TTTTGTATCGAGAAGAAGCT--------------------......................................................................................................................................................................................................................................................................................................................................................................................2012.00200200000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCTGGCTCTGGGCTACGCCGC........................................2412.00200200000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGCATCCTGGCTCTGGGCTAC.............................................2512.00200200000000000000
......................................................................................................................ATTTTTGTATCGAGAAGAAGCT--------------------GA....................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGGCATCCTGGCTCTG...................................................2011.00100100000000000000
..............................................................................................................................ATCGAGAAGAAGCT--------------------GATAAAGGAT............................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCTCTGGGCTACGCCGCCT......................................2211.00100100000000000000
.........................................................................................................................TTTGTATCGAGAAGAAGCT--------------------GAC...................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
....................................................................................................................AAATTTTTGTATCGAGAAGAAGCT--------------------G.....................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
....................................................................................................................AAATTTTTGTATCGAGAAGAAGCT--------------------......................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.................................................................................................................GTTAAATTTTTGTATCGAGAAGAAGCT--------------------......................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
..........................................................................................................................TTGTATCGAGAAGAAGCT--------------------GAG...................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.......................................................................................................................TTTTTGTATCGAGAAGAAGCT--------------------G.....................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
................................................................................................................................CGAGAAGAAGCT--------------------GATAAAGGATT...........................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
..................................................................................................................................AGAAGAAGCT--------------------GATAAAGG..............................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
......................................................................................................................ATTTTTGTATCGAGAAGAAGCT--------------------G.....................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
..................................................................................................................................................................TAAAGGATTCACCATGCTGAAA..............................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
..................GTTGC----------C---------------CGATCGGATA------GAATGTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
....................................................................................................................................................................AAGGATTCACCATGCTGAAAGC............................................................................................................................................................................................................................................................................................................................................................2211.00100000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGCTCTGGGCTACGCC..........................................2111.00100000000000100000
.................................................................................................................................................................ATAAAGGATTCACCATGCTGA................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGCATCCTGGCTCTG...................................................1911.00100100000000000000
..............................................................................................................................................................................................................................................................................CAA-----------------------------------------------------------------CCTGGAACTATGAACCTGAT................................................................................................................................................................................2311.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGGCTCTGGGCTACGC...........................................1911.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGGCATCCTGGCTCTGGGCTAC.............................................2611.00100100000000000000
.........................................................................................................................TTTGTATCGAGAAGAAGCT--------------------G.....................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGCTCTGGGCTACGC...........................................2011.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGCTCTGGGCTACGCCGCCTCC------------------------------------2711.00100100000000000000
............................................................................................................................GTATCGAGAAGAAGCT--------------------GATAAAGGAT............................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
...........................................................................................................GTCTGCGTTAAATTTTTGTATCGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
.........................................................................................................................TTTGTATCGAGAAGAAGCC--------------------......................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
........................................................................................................TTAGTCTGCGTTAAATTTTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGCTCTGGGCTACGCCGG........................................2311.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATCATTTTCTTTGGC...............................................................1811.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGCATCCTGGCTCTG...................................................1811.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCTGGCTCTGGGCTACGCCGCCTC.....................................2711.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCATCATTTTCTTTGGC...............................................................1911.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCATCCTGGCTCTGGGCTACGCCG.........................................2711.00100100000000000000
...........................................................................................................GTCTGCGTTAAATTTTTGTATC.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
droSec2
AA------GTCCCGATAAGTTGC----------C---------------CGATCGGATA------GAATGTTATAAAAGCCCAATCAGT-GGTCTTCCATTCGTTTAGTCTGCGTTAAATTTTTGAATCGAGAAGAAGCT--------------------GATAAAGGATTCACCATGCTGAAAGGTAA--ACATCCTTAGGAA---TA----ATCTACTCAACTATTGTGCGTTCG-------------------------GTGAAATTCAA-----------------------------------------------------------------CCTGGAACTATGAGCTTTATAATCTTAATCA-------------------------------------CGCATACTATTAATCACTCGACTATTTTC-GAATCC-CCCTGCAGCAGTCATCATTTTCTTTGGCATCCTGGCTCTGGGCTACGCCGCCTCC------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGCTCTGGGCTACGC...........................................2019.0090090
................................................................................................................................................................GATAAAGGATTCACCATGCT..................................................................................................................................................................................................................................................................................................................................................................2016.0060060
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGCATCCTGGCTCTGGGCTACGC...........................................2715.0050050
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGCATCCTGGCTCTGGGCTAC.............................................2514.0040040
........................................................................................................................TTTTGAATCGAGAAGAAGCT--------------------......................................................................................................................................................................................................................................................................................................................................................................................2014.0040040
...................................................................................................................................GAAGAAGCT--------------------GATAAAGGATT...........................................................................................................................................................................................................................................................................................................................................................................2013.0030030
.........................................................................................................................TTTGAATCGAGAAGAAGCT--------------------......................................................................................................................................................................................................................................................................................................................................................................................1913.0030030
.................................................................................................................................................................ATAAAGGATTCACCATGCTGAAAGCA...........................................................................................................................................................................................................................................................................................................................................................2613.0030030
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGCTCTGGGCTAC.............................................1813.0030030
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGGCTCTGGGCTACGCCGC........................................2313.0030030
................................................................................................................................CGAGAAGAAGCT--------------------GATAAAGGATT...........................................................................................................................................................................................................................................................................................................................................................................2313.0030030
..........................................................................................................AGTCTGCGTTAAATTTTTGA........................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020020
.................................................................................................................................................................ATAAAGGATTCACCATGCT..................................................................................................................................................................................................................................................................................................................................................................1912.0020020
......................................................................................................................ATTTTTGAATCGAGAAGAAGCT--------------------G.....................................................................................................................................................................................................................................................................................................................................................................................2312.0020020
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCTGGCTCTGGGCTAC.............................................1912.0020020
........................................................................................................TTAGTCTGCGTTAAATTTTTGA........................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020020
...........................................................................................................GTCTGCGTTAAATTTTTGAATCGA...................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020020
................................................................................................................................CGAGAAGAAGCT--------------------GATAAAGGATTCACC.......................................................................................................................................................................................................................................................................................................................................................................2712.0020020
.....................................................................................................................................AGAAGCT--------------------GATAAAGGATT...........................................................................................................................................................................................................................................................................................................................................................................1812.0020020
......................................................................................................................ATTTTTGAATCGAGAAGAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................2112.0020020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGCATCCTGGCTCT....................................................1812.0020020
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGCATCCTGGCTCTGGGCTACGC...........................................2612.0020020
........................................................................................................................TTTTGAATCGAGAAGAAG............................................................................................................................................................................................................................................................................................................................................................................................................1812.0020020
...................................................................................................................................................................AAAGGATTCACCATGCTGA................................................................................................................................................................................................................................................................................................................................................................1912.0020020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGCATCCTGGCTCTGGG.................................................2112.0020020
................................................................................................................................CGAGAAGAAGCT--------------------GATAAAGG..............................................................................................................................................................................................................................................................................................................................................................................2012.0020020
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCTGGCTCTGGGCTACGCCGC........................................2412.0020020
..................................................................................................................................................................TAAAGGATTCACCATGCT..................................................................................................................................................................................................................................................................................................................................................................1812.0020020
.........................................................................................................................TTTGAATCGAGAAGAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................1812.0020020
...............................................................................................................GCGTTAAATTTTTGAATC.....................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGCATCCTGGCTCTGGGCT...............................................2312.0020020
........................................................................................................................TTTTGAATCGAGAAGAAGCT--------------------G.....................................................................................................................................................................................................................................................................................................................................................................................2112.0020020
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATTTTCTTTGGCATCCTGGCTCTG...................................................2711.0010010
.................................................................................................................................................................ATAAAGGATTCACCATGCTGAAA..............................................................................................................................................................................................................................................................................................................................................................2311.0010010
........................................................................................................TTAGTCTGCGTTAAATTTTTGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
.................................................................................................................................GAGAAGAAGCT--------------------GATAAAGG..............................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCCTGGCTCTGGGCTACGCCGC........................................2511.0010010
.......................................................................................................TTTAGTCTGCGTTAAATTTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.......................................................................................................................................................................GATTCACCATGCTGAAAGCA...........................................................................................................................................................................................................................................................................................................................................................2011.0010010
................................................................................................................................................................GATAAAGGATTCACCATGCTGA................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.....................................................................................................................AATTTTTGAATCGAGAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
......................................................................................................................ATTTTTGAATCGAGAAGAAGCT--------------------GAT...................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
........................................................................................................................................AGCT--------------------GATAAAGGATTCACCATGCT..................................................................................................................................................................................................................................................................................................................................................................2411.0010010
......................................................................................................................ATTTTTGAATCGAGAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...........................................................................................................................................T--------------------GATAAAGGATTCACCATGCTGAAAGC............................................................................................................................................................................................................................................................................................................................................................2711.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTTCTTTGGCATCCTGGCT......................................................2211.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATTTTCTTTGGCATC............................................................1811.0010010
.................................................................................................................................................................ATAAAGGATTCACCATGCTG.................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATTTTCTTTGGCATC............................................................1911.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGGCTCTGGGCTACGCCGC........................................2111.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGCATCCTGGCTCTGGGCTA..............................................2411.0010010
..........................................................................................................................................CT--------------------GATAAAGGATTCACCATGCTGAAAGC............................................................................................................................................................................................................................................................................................................................................................2811.0010010
....................................................................................................................AAATTTTTGAATCGAGAAGAA.............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.................................................................................................................GTTAAATTTTTGAATCGAGAAGAAGCT--------------------......................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
...................................................................................................................................GAAGAAGCT--------------------GATAAAGGATTCAC........................................................................................................................................................................................................................................................................................................................................................................2311.0010010
....................................................................................................................................AAGAAGCT--------------------GATAAAGGAT............................................................................................................................................................................................................................................................................................................................................................................1811.0010010
........................................................................................................TTAGTCTGCGTTAAATTTTTGAATC.....................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
.................................................................................................................GTTAAATTTTTGAATCGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGCATCCTGGCTCTGGGCTACG............................................2611.0010010
...................................................................................................................................GAAGAAGCT--------------------GATAAAGGAT............................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.......................................................................................................................TTTTTGAATCGAGAAGAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
......................................................................................................................ATTTTTGAATCGAGAAGAA.............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGCATCCTGGCTCTGGGC................................................2211.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCATCCTGGCTCTGG..................................................1811.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGTCATCATTTTCTTTGGC...............................................................2211.0010010
...........................................................................................................................................T--------------------GATAAAGGATTCACCATGCTGAAA..............................................................................................................................................................................................................................................................................................................................................................2511.0010010
...........................................................................................................GTCTGCGTTAAATTTTTGAATCGAG..................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCTTTGGCATCCTGGCTCTGGGCT...............................................2811.0010010
........................................................................................................................TTTTGAATCGAGAAGAAGCT--------------------GAT...................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGCATCCTGGCTCTGGGCTACGCCG.........................................2911.0010010
................AAGTTGC----------C---------------CGATCGGATA------GA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
....................................................................................................................................................................AAGGATTCACCATGCTGAAA..............................................................................................................................................................................................................................................................................................................................................................2011.0010010
..........................................................................................................................TTGAATCGAGAAGAAGCT--------------------GATA..................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
........................................................................................................................................AGCT--------------------GATAAAGGATTCACCATGCTGA................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.................................................................................................................................GAGAAGAAGCT--------------------GATAAAGGA.............................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGCATCCTGGCTCTGGGCT...............................................2211.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCATCATTTTCTTTGGCATCCTGG........................................................2711.0010010
.............................................................................................................CTGCGTTAAATTTTTGAATCG....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
................................................................................................................................................................GATAAAGGATTCACCATGCTGAAA..............................................................................................................................................................................................................................................................................................................................................................2411.0010010
...................................................................................................................................................................AAAGGATTCACCATGCTGAAAGT............................................................................................................................................................................................................................................................................................................................................................2311.0010010
.................................................................................................................................................................ATAAAGGATTCACCATGCTGAA...............................................................................................................................................................................................................................................................................................................................................................2211.0010001
.....................................................................................................................AATTTTTGAATCGAGAAGAAGCT--------------------G.....................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
.............................................................................................................CTGCGTTAAATTTTTGAAT......................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCATCCTGGCTCTGGGC................................................1911.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATCCTGGCTCTGGGCTACGC...........................................2311.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCATCCTGGCTCTGGGCTA..............................................2211.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCCTGGCTCTGGGCTA..............................................1911.0010010
................................................................................................................................CGAGAAGAAGCT--------------------GATAAAG...............................................................................................................................................................................................................................................................................................................................................................................1911.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTGGCATCCTGGCTCTGGGCTAC.............................................2711.0010010
....................................................................................................................AAATTTTTGAATCGAGAAGAAGCT--------------------......................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCATCCTGGCTCTGGG.................................................1911.0010010
....................................................................................................................AAATTTTTGAATCGAGAAGAAGCT--------------------GAT...................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATTTTCTTTGGCATCCTGGCT......................................................2511.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCATCCTGGCTCTGGGCTAC.............................................2311.0010010
.......................................................................................................................................AAGCT--------------------GATAAAGGATTCACCA......................................................................................................................................................................................................................................................................................................................................................................2111.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCTGGCTCTGGGCTA..............................................1811.0010010
.......................................................................................................................................AAGCT--------------------GATAAAGGATTCACCATGCTGA................................................................................................................................................................................................................................................................................................................................................................2711.0010010
................................................................................................................................................................GATAAAGGATTCACCATGCTGAAAGCA...........................................................................................................................................................................................................................................................................................................................................................2711.0010010
................................................................................................................................CGAGAAGAAGCT--------------------GATAAA................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGCATCCTGGCTCTG...................................................1911.0010010
...........................................................................................................GTCTGCGTTAAATTTTTGA........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.....................................................................................................................................AGAAGCT--------------------GATAAAGGATTCACCATGC...................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.................................................................................................................................................................ATAAAGGATTCACCATGCTGA................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.................................................................................................................GTTAAATTTTTGAATCGAA..................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010010
........................................................................................................................................................................ATTCACCATGCTGAAAGCA...........................................................................................................................................................................................................................................................................................................................................................1930.3310010
droYak3
AAAGTCCCGTCCCGATAAGTTGG----------C---------------CGATTGGATA------GAATGTTATAAAAAGCCACTCGGT-GGCCATTCAATCGTTTAGTCTGCGTTACATTTTTGAATCGAAAAGAAGCT--------------------GATAAAGGATTCACCATGCTGAAAGGTAAGCACATCCTTCGAAA---TA----ATCTACTCAACTGTTGTG-----------------AC---TGGCGTAAAGTGAAACTCAT-CGAA--TATTTACAAATACATTTTAAGC------------------ATATT--------------------------ACATGATAATCTTTATCA-------------------------------------CTATTACTATTAATCACTTGGATAT--------------TCGCAGGACTCATCATATTCTTTGGCCTGCTGGCTCTGTGCTACGCCGCCTCC------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................AAAAGAAGCT--------------------GATAAAGGATT...........................................................................................................................................................................................................................................................................................................................................................................2113.00300300000000
.............................................................................................................................AATCGAAAAGAAGCT--------------------GATAAAGGATT...........................................................................................................................................................................................................................................................................................................................................................................2613.00300300000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTTGGCCTGCTGGCTCTGTGCTA..............................................2712.00201100000000
.....................................................................................................................................AGAAGCT--------------------GATAAAGGATTCACCATGCT..................................................................................................................................................................................................................................................................................................................................................................2712.00201100000000
..............................................................................................................................ATCGAAAAGAAGCT--------------------GATAAAGGAT............................................................................................................................................................................................................................................................................................................................................................................2412.00200100010000
.................................................................................................................................GAAAAGAAGCT--------------------GATAAAGGATT...........................................................................................................................................................................................................................................................................................................................................................................2212.00200000020000
...................................................................................................................................AAAGAAGCT--------------------GATAAAGGATT...........................................................................................................................................................................................................................................................................................................................................................................2012.00200100010000
.....................................................................................................................................AGAAGCT--------------------GATAAAGGATT...........................................................................................................................................................................................................................................................................................................................................................................1812.00201100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATATTCTTTGGCCTGCTGGCTC.....................................................2612.00201100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTTGGCCTGCTGGCTCT....................................................2112.00200200000000
..........................................................................................................................TTGAATCGAAAAGAAGCT--------------------GATAAAGGATT...........................................................................................................................................................................................................................................................................................................................................................................2912.00220000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATATTCTTTGGCCTGCTGGCTCT....................................................2712.00201100000000
................................................................................................................................CGAAAAGAAGCT--------------------GATAAAGGA.............................................................................................................................................................................................................................................................................................................................................................................2112.00201100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTTGGCCTGCTGGCTCTGTGCTA..............................................2911.00110000000000
................................................................................................................................................................GATAAAGGATTCACCATGCT..................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
....................................................................................................................................................................AAGGATTCACCATGCTGAAAGGACT.........................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATTCTTTGGCCTGCTGGCT......................................................2211.00100100000000
..........................................................................................................................TTGAATCGAAAAGAAGCT--------------------GATAAAG...............................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
............................................................................................................................GAATCGAAAAGAAGCT--------------------GATAAAGGAT............................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
.................................................................................................................................GAAAAGAAGCT--------------------GATAAAG...............................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATTCTTTGGCCTGCTG.........................................................1911.00100100000000
..................................................................................................................................................................TAAAGGATTCACCATGCTGA................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
................................................................................................................................CGAAAAGAAGCT--------------------GATAAAGGATTC..........................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATATTCTTTGGCCTGCTGGCTCT....................................................2611.00100100000000
...........................................................................................................GTCTGCGTTACATTTTTGAATC.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
..............................................................................................................................ATCGAAAAGAAGCT--------------------GATAAAGGATT...........................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
.....................................................................................................................................AGAAGCT--------------------GATAAAGGATTCACC.......................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
.....................................................................................................................................................................AGGATTCACCATGCTGAAAGGACT.........................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.................................................................................................................GTTACATTTTTGAATCGAAAAGAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
....................................................................................................................................AAGAAGCT--------------------GATAAAGGATTCACCATG....................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTCATCATATTCTTTGGCCTGCTGGCT......................................................2911.00100100000000
.......................................................................................................................................................................GATTCACCATGCTGAAAGGACC.........................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGGCTCTGTGCTACGCC..........................................2011.00100100000000
................................................................................................................................CGAAAAGAAGCT--------------------GATAAAGGATTCACC.......................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
.........................................................................................................TAGTCTGCGTTACATTTTTGAATC.....................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
................................................................................................................................CGAAAAGAAGCT--------------------GATAAAGG..............................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
....................................................................................................................................AAGAAGCT--------------------GATAAAGGATTC..........................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
................................................................................................................................CGAAAAGAAGCT--------------------GATAAAGGATT...........................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
.........................................................................................................................................GCT--------------------GATAAAGGATTCACCATGCTG.................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.......................................................................................................................................AAGCT--------------------GATAAAGGATTCACCATGC...................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
.............................................................................................................CTGCGTTACATTTTTGAATC.....................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.................................................................................................................................GAAAAGAAGCT--------------------GATAAAGGA.............................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTGCTGGCTCTGTGCTA..............................................2011.00101000000000
..........................................................................................................................TTGAATCGAAAAGAAGCT--------------------GATAAAA...............................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
.............................................................................................................CTGCGTTACATTTTTGAAT......................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
.........................................................................................................................TTTGAATCGAAAAGAAGCT--------------------......................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
.........................................................................................................................................GCT--------------------GATAAAGGATTCACCATGCT..................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.............................................................................................................CTGCGTTACATTTTTGAATCGAAAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
...........................................................................................................GTCTGCGTTACATTTTTGA........................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTTGGCCTGCTGGCTC.....................................................2211.00100100000000
.............................................................................................................................AATCGAAAAGAAGCT--------------------GATAAAG...............................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.........................................................................................................................TTTGAATCGAAAAGAAGCT--------------------GATAAAGGA.............................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
...................................................................................................................................................................AAAGGATTCACCATGCTGAAA..............................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...................................................................................................................................................................AAAGGATTCACCATGCTGAAAGGA...........................................................................................................................................................................................................................................................................................................................................................2411.00100010000000
.............................................................................................................CTGCGTTACATTTTTGAATCGA...................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.................................................................................................................................GAAAAGAAGCT--------------------GATAAAGGAT............................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
....................................................................................................................................AAGAAGCT--------------------GATAAAGGATT...........................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000
......................................................................................................................ATTTTTGAATCGAAAAGAAGCT--------------------GAG...................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
...................................................................................................................................................................AAAGGATTCACCATGCTGAAAGGAC..........................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
..............................................................................................................TGCGTTACATTTTTGAATC.....................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..............................................................................................................................ATCGAAAAGAAGCT--------------------GATAAAGGATTCACC.......................................................................................................................................................................................................................................................................................................................................................................2911.00100100000000
..........................................................................................................................................CT--------------------GATAAAGGATTCACCATGCTGA................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
..............................................................................................................................ATCGAAAAGAAGCT--------------------GATAAAGGA.............................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCCTGCTGGCTCTGTGCTACGCCGC........................................2811.00100100000000
.......................................................................................................................................................................GATTCACCATGCTGAAAGGACT.........................................................................................................................................................................................................................................................................................................................................................2220.50100100000000
droEre2
AA------GTCCCGATAAGTTGC----------C---------------CGATCGGATA------GAATGTTATAAAAGCCCACTCGAT-GGCCATCCATTCGTTTAGTCTGCGTTAGATTTTTGAATCGCAAAGAAGCT--------------------GCTAAAGGATTCACCATGCTGAAAGGTAA--ACATCCTTAGGAA---TA----ATCCACTCCACTACTGTGCGTTCGGTTGTG-----AC-AAAGGGACAAAGTGAAATTCAC-AGAA--T-------AATATATTTATAGC------------------TAAAATACTATCATACTTCCTAGAACTATGAACTTAATAATCTCAATCA-------------------------------------C---------TATTCACTCGGATATTCGC-TGATCCTCCCTGCAGCACTCATCATTTTCTTCGGCCTCCTGGCTCTGTGCTACGCCGCCTCC------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................CTGCGTTAGATTTTTGAAT......................................................................................................................................................................................................................................................................................................................................................................................................................1918.0080008000
................................................................................................................................CGCAAAGAAGCT--------------------GCTAAAGGATT...........................................................................................................................................................................................................................................................................................................................................................................2313.0030102000
...........................................................................................................GTCTGCGTTAGATTTTTGAAT......................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030101100
................................................................................................................................CGCAAAGAAGCT--------------------GCTAAAG...............................................................................................................................................................................................................................................................................................................................................................................1912.0020002000
..............................................................................................................TGCGTTAGATTTTTGAAT......................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020002000
......................................................................................................................ATTTTTGAATCGCAAAGAAGCT--------------------GCTA..................................................................................................................................................................................................................................................................................................................................................................................2612.0020101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATTTTCTTCGGCCTCCTGGC.......................................................2412.0020200000
.......................................................................................................................................................................GATTCACCATGCTGAAAGC............................................................................................................................................................................................................................................................................................................................................................1911.0010001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCCTCCTGGCTCTGTGCTACGCC..........................................2511.0010100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCTGGCTCTGTGCTACGCCGCC.......................................2411.0010100000
.............................................................................................................................AATCGCAAAGAAGCT--------------------GCTAAAGGA.............................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCTGGCTCTGTGCTA..............................................1811.0010001000
.................................................................................................................................GCAAAGAAGCT--------------------GCTAAAG...............................................................................................................................................................................................................................................................................................................................................................................1811.0010001000
...................................................................................................................................AAAGAAGCT--------------------GCTAAAGGA.............................................................................................................................................................................................................................................................................................................................................................................1811.0010001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTCATCATTTTCTTCGGC...............................................................2111.0010100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATTTTCTTCGGCCTCCTGGCT......................................................2511.0010100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGGCCTCCTGGCTCTGTGCTACGC...........................................2711.0010100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCTGTGCTACGCCGCCTCC------------------------------------2211.0010100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATTTTCTTCGGCCTCCT..........................................................2011.0010001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTCATCATTTTCTTCGGCC..............................................................2211.0010001000
...................................................................................................................................AAAGAAGCT--------------------GCTAAAGGATT...........................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
..........................................................................................................................................CT--------------------GCTAAAGGATTCACCATG....................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTTCGGCCTCCTGGCTCTGTT.................................................2411.0010001000
........................................................................................................................TTTTGAATCGCAAAGAAGCT--------------------GCT...................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
................................................................................................................................CGCAAAGAAGCT--------------------GCTAAAGG..............................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
......................................................................................................................ATTTTTGAATCGCAAAGAAGCT--------------------GCC...................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
..............................................................................................................................ATCGCAAAGAAGCT--------------------GCTAAAGGATT...........................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
.................................................................................................................GTTAGATTTTTGAATCGCAAA................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
................................................................................................................................................................GCTAAAGGATTCACCATGCTGAAAGC............................................................................................................................................................................................................................................................................................................................................................2611.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCTTCGGCCTCCTGGCTCTGT..................................................2511.0010100000
................................................................................................................................CGCAAAGAAGCT--------------------GCTAAA................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTTCTTCGGCCTCCTGG........................................................2011.0010001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCATCATTTTCTTCGGCCTCCTGGC.......................................................2711.0010001000
...........................................................................................................................................T--------------------GCTAAAGGATTCACCATGCT..................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATTTTCTTCGGCCTCCTGG........................................................2211.0010001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTTTCTTCGGCCTCCTGG........................................................2111.0010001000
................................................................................................................................................................GCTAAAGGATTCACCATGCC..................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCATCATTTTCTTCGGCCTCC...........................................................2311.0010100000
..............................................................................................................................ATCGCAAAGAAGCT--------------------GCTAAAG...............................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
................................................................................................................................CGCAAAGAAGCT--------------------GCTAAAGGA.............................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATTTTCTTCGGCCTCCTGG........................................................2311.0010001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCGGCCTCCTGGCTCTGTGCT...............................................2411.0010100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCGGCCTCCTGGCTCTGTGCTC..............................................2511.0010100000
.........................................................................................................TAGTCTGCGTTAGATTTTTGAAT......................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000
.................................................................................................................................GCAAAGAAGCT--------------------GCTAAAGGATT...........................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
..............................................................................................................................ATCGCAAAGAAGCT--------------------GCTAAAGGATTCAC........................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
................................................................................................................................CGCAAAGAAGCT--------------------GCTAAAGGATTCACCAT.....................................................................................................................................................................................................................................................................................................................................................................2911.0010100000
..............................................................................................................................ATCGCAAAGAAGCT--------------------GCTAAAGG..............................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
...........................................................................................................GTCTGCGTTAGATTTTTGAATCGCAA.................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001000

Generated: 05/17/2015 at 10:13 PM