ID:

dps_3413

 Coordinate:

XL_group3a:647549-647761 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.7 -12.3 -12.1

Flybase annnotation

exon [dpse_GLEANR_10224:4]; exon [dpse_GLEANR_10224:3]; CDS [Dpse\GA19697-cds]; CDS [Dpse\GA19697-cds]; intron [Dpse\GA19697-in]

Repeatable elements

NameClassFamilyStrand
CT-richLow_complexityLow_complexity+
(CTG)nSimple_repeatSimple_repeat+
mature
star
  1. XL_group1e:4957839-4957863 -
  2. 2:13091827-13091851 -
  3. 2:15860227-15860251 +
  4. dps_3413  XL_group3a:647671-647695 -
  5. XL_group3a:658869-658893 +
  6. XR_group8:231795-231819 +
  7. XR_group8:8927791-8927815 -
  8. 4_group3:7520417-7520441 -
  9. 4_group4:541606-541630 +
  10. XR_group6:3510014-3510038 -
  11. XR_group6:11223015-11223039 -
  12. XL_group1a:1808461-1808485 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACAGCAGGACCCACAGCAGGATCCAGAGCCTGAATCTGGATCGGAGCAGAGTCTGCAGCAGAGCCCAGAACAAAAAGAGGAGAAGCCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACAAGAAGTGCCCCATGAACAAGTCCCAGCAAAGAAGGAAGATCAAGATCCGAATCAGCACGCAGAACAGAACCAAGTAGGGGACCGGGTCACCGAGCATGAACAGAAGCAAGGCCCTGAGCAAGAAGAGGATCAGAAGGGGGAGGAGGAGGAGGACGACGACGACGACGTGTAT
********************************************************************************************************************..((.((....)).))....((((.....))))............((((.((......(((.........)))......)).......((........))..))))******************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR902010
ovaries
 M062
head
 SRR902012
CNS imaginal disc
 M040
female body
 GSM343916
embryo
 GSM444067
head
 V112
male body
.....................................................................................................................................................................................................ACGCAGAACAGAACCAAGTAGGGGA........................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0
..............................................................................................................................................GAAGTGTCCCATGAACAAGTCCC.................................................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................................................................................................................................................................AAGCAAGGCCCTGAGCAAGAAGAGG............................................ 25 0 1 1.00 1 0 0 1 0 0 0 0
..................................................................................................................................GCAGCAGCACAAGAAGTGTC................................................................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0
................................................................................................................................................................................................TCAGCACGCAGAACAGAACCAAGTAGG.............................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................AACCAAGTGGTTGACCGGGT..................................................................................... 20 3 2 0.50 1 0 0 0 1 0 0 0
........................................................................................................................................................................AAACAAGGAAGATCAAACTCC............................................................................................................................ 21 3 9 0.11 1 0 0 0 0 1 0 0
.............................................................................................................................................................................................................................................................................................GGAGGAGGACGACGACGA.......... 18 0 10 0.10 1 0 0 0 1 0 0 0
....................................................................................................................CAGCAGCAGCAGCAGCAGCAGCACA............................................................................................................................................................................ 25 0 12 0.08 1 0 0 0 1 0 0 0
...................................................................................................................................................................................................................................................................................................GGACGAGGACGACGACGTG... 19 1 13 0.08 1 0 0 0 1 0 0 0
.......................................................................................AGTAGCAGCAGCAGCAGCA............................................................................................................................................................................................................... 19 0 20 0.05 1 0 0 0 0 0 1 0
.......................................................................................................................................................................................................................................................................................GGAGGACGAGGAGGACGACT.............. 20 2 20 0.05 1 0 0 0 1 0 0 0
......................................................................................CAGTAGCAGCAGCAGCAGC................................................................................................................................................................................................................ 19 0 20 0.05 1 0 0 0 0 0 0 1
..................................................................................................................................................................................................................................................................................AAGGGAGAGGAGGAGGAAGA................... 20 2 20 0.05 1 0 0 0 1 0 0 0
........................................................................................GTAGCAGCAGCAGCAGCAGCAG........................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................................................GAAGACCCTGAGCATGAAG............................................... 19 3 20 0.05 1 0 0 0 0 0 1 0

Anti-sense strand reads

TGTCGTCCTGGGTGTCGTCCTAGGTCTCGGACTTAGACCTAGCCTCGTCTCAGACGTCGTCTCGGGTCTTGTTTTTCTCCTCTTCGGTCATCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTGTTCTTCACGGGGTACTTGTTCAGGGTCGTTTCTTCCTTCTAGTTCTAGGCTTAGTCGTGCGTCTTGTCTTGGTTCATCCCCTGGCCCAGTGGCTCGTACTTGTCTTCGTTCCGGGACTCGTTCTTCTCCTAGTCTTCCCCCTCCTCCTCCTCCTGCTGCTGCTGCTGCACATA
*******************************************************************************************..((.((....)).))....((((.....))))............((((.((......(((.........)))......)).......((........))..))))******************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
 V112
male body
...............................................................................................................................................................TCAGGGTCGTTTCTTCCTTCT..................................................................................................................................... 21 0 1 1.00 1 1 0 0
....................TAGGTCTCGAACTTAGAACTAG............................................................................................................................................................................................................................................................................... 22 2 1 1.00 1 1 0 0
...........................................................................TCTCCTCTTCAGTCCTCGACG......................................................................................................................................................................................................................... 21 3 4 0.75 3 3 0 0
....................................................................................................................................................GGGGTAATTGTTCAGGTTC.................................................................................................................................................. 19 2 2 0.50 1 1 0 0
...................................................................................................................................................................................................................................AGTGGCTCGTGCTTGTGAT................................................................... 19 3 12 0.33 4 3 0 1
...................................................................................................................................................................................................................GTCCATCGCCTGGCGCAGTG.................................................................................. 20 3 3 0.33 1 1 0 0
........TGGGTGTCGTCATATATCTC............................................................................................................................................................................................................................................................................................. 20 3 8 0.13 1 0 1 0
...............................................................................................................................................................................................................................................TTGTCTTCGGTGCGGGACTA...................................................... 20 3 10 0.10 1 1 0 0
........................................................................................................................................................................TTTTTTCCTTCTGGTTCTA.............................................................................................................................. 19 2 12 0.08 1 0 1 0
TGTCGTCTTGGGGGCCGTCC..................................................................................................................................................................................................................................................................................................... 20 3 17 0.06 1 1 0 0
..........................................................................................................CGTCGTCGTCGTCGTCGTCGTC......................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0
...........................................................................TCTCCTCTTCAGTCCTCGAC.......................................................................................................................................................................................................................... 20 3 20 0.05 1 1 0 0
....................................................................................................................................................................................................................................................TTCGTTCCGGGGTTCGTT................................................... 18 2 20 0.05 1 1 0 0
............................................................................................GTCGTCGTCGTCGTCGTCGTCGT...................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0
............................................................................................................................................................................................................................................................TCGACTCGTTCTTCTCATA.......................................... 19 3 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XL_group3a:647499-647811 - dps_3413 ACAGCAGGACCCACAGCAGGATCCAGAGCCTGAATC-TGGATCGG-----------------------------AGCAGAGTCTGCAGCAG----------------AGCCCA-------------GAA---CAAAAAGAGGAG----------AAGCCA--GTAGCA---------GCA----------------------------------------GCAG---CAGCAGCAG----CAG-----------------------------------------------------------------CAGCAG---CAGCAG-CAGCAGCAGCAGCACA--A---------------------------GAAGTGCCCCATGAACAAGTCCCAGCAAAG---AAGG-----------------A-AGAT---CAAGATCC------GAAT----------------------------CAGCACGCAGAACAGAACC---------------------------------------------------AA------------------------------------------GTA------------------------------GGGGACCGGGTCA-CCG--------AG--------CATGAAC---AGAAGC------AAGGCCCTG---AGC---A---AGAAGAGGA---T---CAGAAGGGG---------GA---GG--------------------------------------------AGGAGGAGGACGACGACG---------ACG---ACG--------------------------------TGTAT
droPer2 scaffold_0:8271466-8271790 - ACAGCAGCAGCAAATGCAACAGCAGCAGCA----AAT-----------------------GCA------------GCAACAGCAGCAACAG----------------CAACAA----------CAGCAGCAA------------ATGCAGCA-------------------GCAACAGCAACAGCAG-------------------------CAAATG----------------------CAGCA---ACAGCAG---------CAGCAGCA--------GCAA---------CAG---------------CAGCAACAACAG-CAACAACAGCAACAAC--A---------GCAGCAACAACAGCCGCA------------------ACAACAG-----------------------------CAACA------------ACAGCA---G------CAACAG---------CGCTCAC---------------------------------------------------------AG----------------------------------CATCAGCAA----------ACGCA------------------------------GACGAACAGCTT---C-------------------------C------------------------------------------------------AGCAG------------CAACAACA---GC---AGCCCTTGAGCGCCACAGAGAACCTGCAGA---------------------TGGAGGAGTCCGGGCCAGGAC--CTGCCCTCG-----ACAATGGCGGCG---TTAAT
droWil2 scf2_1100000004888:1009712-1010007 - ACAGCAGCAACAACAGCAGCAGCAGCAACA---------------------------------------------GCAACAACAGCAGCAG----------------CAACAACAACA----GCAGCAA------------------CAACA-------------ACAGCAGCAGCA-------------------------------------------GCAA----------------------CAG-----------------------CAACAACA---GCAGCAGCAA---CAACAACAG---CAGCAACAACAACAG-CAGCAGCAACAACAGC--AACAGCAACAACAACA------------------------------GCAG---CAGCAACAGCAA-----------------CAGCA------ACAACAGCAGCAGCAGCAG---CAACTGCAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAG--------------CAGCAGC------------AACAGCAACA------GCAACAACATCAGC---AGAAAC---AGCAACAACA---GCAGCAACAGCA---GC-------------------------------------------------------------------AACAGCAA----------C--------AACA--------ACACG
droVir3 scaffold_12963:14648904-14649196 + ACAGCAGAAGCAGCAGCAGGAAGAGTTGCT---------------------------------------GGAACAGCAAAAGCAGCAGCAG----------------AAAGAA----------CAACAGCAG------------AAGGAGAA-------------GCA------GCAGCAGAAAA-------------------------------------AG---------CTG----CTG------GAAGAG---------CAGAAG-----C---AGCAG---------------CAGGAA---GAGCTGCTGAAACAA-CAAAAGCGA------C--AGCAGGAAGAGAAGCG---------ACA------------------GCAGGAAGAGCA---ACAG-----------------CGGAAG---GAGCAGCT------GCAGCAGCAG------GAGGAGCTGCTGAAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------CAGAAGC------------AGCAGCAAGA------AGAGCAACAGCAAA---A---GGAGCAGCAGCAACT------------AG--------------------------AAGA-----------GCA-------GGA-----------------GCG---ACA--------------------------------ACAGC
droMoj3 scaffold_6473:10898326-10898606 + GCAGCAGCAACAGCAGCAGCAGCAACAGCA---------------------------------------------GCAGCAGCAGCAGCAG----------------CAACAGCAGCA----GCAGCAGCAG------------CAGCAGCA-------------------GCAGCAGCAGCAACAG-------------------------CAGCAG----------------------CAGCA---GCAGCAG---------CAGCAACA--------GCAG---------CAGCAACAACAG---CAGCAACAGCAGCAG-CAA------------C--A---------GCAGCAACAGCAGCAACA------------------GCAGCAA-----------------------------CAGCA------------ACAGCA---A------CAACAG---------CAGTAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--CAA---CAGCAGC------------AGCAGAAACAGCAGC------A---GCAGC---A---GCAGCAGCAGCAACAGCAGCAGCAGCAGCA---GC-------------------------------------------------------A---------ACA---GCA--------------------------------ACGAC
droGri2 scaffold_14828:10761-11047 - GCAGCAGCAGCAGCAGCAGCAGCAGCAGCA---------------------------------------------GCAGCAGCAGCAGCAG----------------CAGCAGCAGCA----GCAGCAGCAG------------CAGCAGCA-------------------GCAGCAGCAGCAGCAG-------------------------CAGCAG----------------------CAGCA---GCAGCAG---------CAGCAGCA--------GCAG---------CAG---------------CAGCAGCAGCAG-CAGCAGCAGCAGCAGC--A---------GCAGCAGCAGCAGCAGCA------------------GCAGCAG-----------------------------CAGCA------------GCA---GCAG------CAGCAGTTAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGCAGC--AGCAT---CAGCAGC------------AGCAAAAACAGC---AGC---A---GCAAC---A---GCAGCATCAGCAG---------CAGCAGCA---GCAGCT-----------------------AAAAC-----------------------A---------ACA---ACA--------------------------------ACAGC
droAna3 scaffold_13266:4353761-4354079 + ACAGCAGCAGCAACAGCAGCAGATGCAACT---------------------------------------GGC------------GCAGCAG----------------CAGCAA-----G-----CGCT---------------------GCA----------------------------GCAACACCACCAGCACCTC-----------------------------------------CAGCAGCAG-----------------------CACCAGCA---ACAGCAGCAA---CAACAACAG---CAGCAACAGCAACAG-CAGCAGCAACAACAAC--AACAGCAGCAGCAGCA------------------------------GAAGCTGAAACA---GTCG-----------------CA--------------------------------------------------------------GG------------------------------------------------CGGCAAGTGCGGCAGCCAACAACAAGGCCACCAACCTGACCAAGGACTCGCCCAAGCA------------------------------GAAGAACAGCTCGGCCG--------AG--------GAGGAAC---AGCAGC------------------------A---ACAGC------------AGCAGCT---------------GAA---GG--------------------TGAA-----------GCA-------GGA-----------------GGGCCAGAAG--C---CGACG--------ATGG--------AAACG
droBip1 scf7180000393726:5788-6089 + ACGGCGGCAGCGGCAACATCAACCTCAGCCACA-TC-TGCAGCGG-----------------------------GG------------CAG----------------CAACAG---GT----ACAGGAG---CTACAGCAGTAG----------CAGTAG--GGAGCA---------GTA----------------------------------------GCAG---TACAACCAC---------------------------------------------------------------------------------CACCAG-CAGCAGCAGCACCAGCACAACCACATCTTGTGCC------------------------------ACATCCACAGCA-------------------------------------------------------------------------------------------CAGCGCCACCAAGACACCTCCTCAGATGACGTCCTGGACACTCACAG------------------------------------------------------A---GTCAAGGACCAGGTGCAGCCGGC------CG------------------------AC--------GAGCTG---------------------------------------CTTC------------AGGAG------------------GA---GCTACTG-----------GCCGGTGGCCGAAACGAGG---AGGACGACGACGACGACC---------ACC---ACC--------------------------------ACTTG
droKik1 scf7180000302401:199404-199694 + GGAGCAAAAGCTGCTACAGGAGCAAAAGCA---------------------------------------------GCAACAGGAGCAAAAG----------------CTGCAACAGGA----GCAAAAG------------------GAGCA-------------AAA------GCAGCAGCAGGAG-------------------------CAAA------AG---------CAG----CAA------CAGGAG---------CAAAAG-----CA---GCAACAGG---------------------AGCAACAGGAGTCA-CAGGAGTCA------C--AGGAGCTACAGGAGCC------------------------------ACAGCAGCAACAAGAGCCA-----------------CAGGA------GCCTCAGCA---GCAGCAGGAG------CCACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGCCAC--AG------GAGCCAC------------AGGAGCAACAGCAGCAACAGCA---GC------A---AC---AGCAGCAACA------GGAGCAACA---GGAGTC-----------------------AAAGGA---------------------G------------C---AA----C----------------------------AGG-A
droFic1 scf7180000454077:842643-842911 + GCCACAAGACCTCCGGCACGGGCAGCGATC------------------------------TGGG---------------------CAACA-TATCGGAGAACGGA-----------------CTGATGA------------------CCACGGCGGACATCC-----A---CCACCA-------------------------------------------CCAACAGCAGCA----GCAGCAGCA---G--------------------------------------------------------------CAG---CAGCAG-CAGCAGCAACAGCA--------------------------------GC---------------------AGCAGCA---G-AGCAGTGCAGCCAGGCAGGA-GGAG----ATGAGCC------GACT----------------------------CA-----------------------------------------------------------------------------------------------ACGCCG------------------------------GACTGGACAAGCC-CGCCGCCGCGGTG-GCC--------ACT-------CTGAAGA------------GGAAGC---------------------------A---GA---AGCAG------------------AC---CA--------------------------------GCA---AGCAGCAGCAGCAGCAGA---------GCG---CCG--------------------------------ACGGC
droEle1 scf7180000491214:3366518-3366823 + ACAACAACAGCCAGCACAAAAG--ACAGCT----------AACGAACGCCAAGCAAGACAATGA---------------------CGACA-TGTTGAAAAACAAAAATTATTT----------CAATAG------------------TAAAAACAAAAGTAT-----A---GCAACA-------------------------------------------GCAACAACAG---CA-GCAGCAGCAGCAG-----------------------CAACAGTA---ACAGCAGCGA---AAGCGACAG---CAACATCAGCCAGCA-CAGCAGCAACTTCTGG--AGGTGGAGCGGGAACG------------------------------GGAACGGGAGCG---GGAA-----------------------------------------------------------------CGGGTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG--------GAACGG------GAGC---------------------------------------------AACAG------------------GA---GTTGCTG-----------GTGGAAAAGCCAGAGGA---------------------G------------G---AG----CAGGCGGCGGTCCAAC---AATGTCGCCAACA-T
droRho1 scf7180000779479:322589-322834 - GCAACAGCAATCGCCGTTGCATTCGCCGGC---------GAACGA-----------------------------AG------------TTG----------------CAATAG---CC----ACAGAAC---------------A-----------GCCA--GAAGTT---------GCAGTTG-------------------------------------------CAGCAGCAG----CAG--------------------------------------------------------CAGCAG---CAGCAGCTCCAGTTGCCACTAGCAACATCAAG--AGCGGCAGCA---------ACAGCA---GC---------------------AGCATCA---A--------------------TCACA------------CCGGCA---A------CAATAG---------CAGT--------------------------------------------------------------------------------------------------------------CAGC----------AGGACGAGGAGGAACTG-----------------------------------------------------------------------------------------GACGAGGA---T---GAGGAGGA---------------CGA---GG--------------------------------------AGGAGGACGAGGACGAGG---------ACG---ATG-AGG----------------------------AGG-A
droBia1 scf7180000302126:3397936-3398233 - GCAGCAACAACAGCAGCAGCAGCAACAGCA---------------------------------------------GCAGCACCAGCAGCAG----------------CAACAC-----G-----CCCA---------------------GCA-------------GCT------GCAGCA---------CCAGCA-----------------------------------------GCTGCAGCAGCAG-----------------------CACGTGCA---GCAGCAGCAA---CACCAGCAG---CAGCAACACCACCAC-CACCAGCAACACCAGC--AGCTGCATCACGATCC------------------------------GCAGCAACAGCA---TCCG-----------------CAGTAC---CACCCGCA------CCAGCTGCAC------GCCCACGCCCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------CCC--------AC--------CAGCAGC------------AGCAGCAACAGCAGC------A---GCAAC---A---GCAGCAGCAGCAACA------GCA---ACAGCAGCAGCTC-----------CACGGCGATCCCGACGA---------------------C-------------------------------------------------------G
droTak1 scf7180000415394:315909-316216 - GCAGCAACACTCGCAACAGCAGCAGCACTC------------------------------GCAGCAACATGC---------CCAGCAGCTG----------------CAACAT-----G-----CGCA---------------------ACA------------------------------------------------------------------------------------GCTGCAGCAGCAACA---CTCGCAGCAGCAG-----CACCACTC---GCAGCAGCAG---CAGCACTCG---CAGCAACATCACCAC-CACCAGCAACACCAGC--AGCTGCATCTCGATCC------------------------------GCAGCAGCAGCA---TCCG-----------------CAGTACGGTCATCCCCA------CCAGCTGCAC------GCCCATGCGCTGCCCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--------CAGCAGCAACAGCAGCAGCA------------------------GCAGC---AGCAGC---AACAGCAACA---GCAGCAGCAGCA---GCAGCTG-----------CACGGCGATCCCGATGA---------------------C-------------------------------------------------------G
droEug1 scf7180000409672:3170029-3170335 - ACAGCAGCAGCAACAGCAAATGCAAATTGC---------------------------------------------CCA------GCAGCAA----------------CAGCAG-----G-----CGAT---------------------TCA-------------ACA------ACAT---------CATCAGCACCTT-----------------------------------------CAACAGCAA-----------------------CACC---A---ACAGCAGCAA---CAGCAGCAG---CAACAACATCAACAG-CAGCAGCAACAACAAC--AGCAGCAGCAA---------CAACA---GC---------------------AACAG-----------------------------------CAAAAACT---GAA---A------C-----------------------AGTCGCAGG------------------------------------------------CGGCAAGTGCGGCGGCCAATAACAAGGCCACCAACCTGACGAAGGACTCGCCCAAACA-------------------------AAAG-GGTGGCGATG----ACG----------------------------------------------------------------ATC------------AGCCACTGAA---GGTGAA----------------------------------------------GCA-------GGA-----------------GGGTCAGAAG--C---CGACC--------ATGG--------AAACG
dm3 chrX:10501711-10502008 - GCAGCAACAGCAACAGCAGCAGCAACAGTC---------------------------------------------GCAGCACCAGCAACAG----------------CACCAACAGCA----GCAC------------------GCCCAGCA-------------ACT------GCAGCACCAACA--------------------------------------------------GCTGCAGCAGCAACA---CGCCCAGCAGCATCAG--------------------------------CAG---CAACAGCACCACCTC-CACCAGCAGCACCAGC--AGCTGCATCACGATCC------------------------------GCAGCAGCAGCA---TCCG-----------------CAGTAC---CATCCGCA------CCAGCTGCAC------GCCCATGCCCTGCCTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--------CAGCAGC------------AGCAGCAACAGC------AGCA---ACAACAGCA---GC---AGCAG------------------CA---GCAGCTG-----------CACGGCGATCCCGACGA---------------------C------------G---AGG--------------------------------AGGTG
droSim2 x:11980501-11980782 - GCAGCAGCAGCAGCAGCAGCAGCAGCATGA---TAAT-----------------------GGACCAACG-TC---------CCATCATTTG----------------CATCAA-----TCAT-------C---------------------------------------------------------TATCAGCATCTCTAATCAGCAGAATAAAGCGACGCAACAGCAGCA----GCAGCAG-----------------------------------------------------------------CAGCAA---CACCAA-AAGCAGCAACAACAAC--A---------------------------GGCTTCCAGCATGTCCGCGTATCAGCAACG---CCTG-----------------C--CAT---CAAATGCA------GCAT----------------------------CCATTCACAGGTGAGTGCC---------------------------------------------------AAAGTTGGCAACAATC-CATAC---------------------A---TNGGAGGAGGAGGAGGAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-AGG----------------------------AGG-A
droSec2 scaffold_21:378868-379166 - GCAGCAGCAGCAGCAGCATGATAATGGACC-----------------------------------AACG-TC---------CCATCATTTG----------------CATCAA-----TCAT-------C---------------------------------------------------------TATCAGCATCTCTAATCAGCAGAATAAAGCGACGCAA------------------------------------------------------------------------CAGCAGCAGCAGCAGCAA---CACCAA-AAGCAGCAACAACAAC--A---------------------------GGCTTCCAGCATGTCCGCGTATCAGCAACG---CCTG-----------------C--CAT---CAAATGCA------GCAT----------------------------CCATTCACAGGTGAGTGCC---------------------------------------------------AAAGTTGGCAACAAGA-AAT----G-----------TGGGCAAAGGG------------------------------GAG--------------GAGGGG--------------GT------------------------------------A---GGAAGAGGA---GA---AGGAG------------------AA---GG--------------------------------AGG---AGGAGGAGGAGGAGGAGG---------AGG---AGG--------------------------------AGGAG
droYak3 X:19070597-19070861 - GTCGCAGCACCAGCAGCAGCACGCCCAGCA---------------------------------------------G------------CTG----------------CAACAC---CA----ACA---------------------------------------------------------------------------------------------------------------GCTGCAGCAGCAACA---CGCCCAGCAGCATCAG--------------------------CAGCAGCAG---CAGCAACACCATCTA-CACCAGCAGCACCAGC--AGCTGCATCACGATCC------------------------------GCAGCAACAGCA---TCCG-----------------CAGTAC---CATCCGCA------CCAGCTGCAC------GCCCATGCGCTGCCAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--------CAGCAGC------------AGCAGCAGCA------ACAGCA---GCAACAACA---GC---AGCA------------------GCA---GCAGCTG-----------CACGGCGATCCCGACG---------------------------------ACG---ACG--------------------------------ACGTG
droEre2 scaffold_4690:3672037-3672313 + GAAGCAGCAGCAACAACAGAAGCAGCAGGA---------------------------------------------ACCACAGAAGCAGCAG----------------CAGCAACCGAA----CCAGCAG------------------CAGCA-------------ACCGAACCAGCA-------------------------------------------GCAACAACAG---AA-GCAGCAGCAGCAACA---ACAGAAGCAGCAGCAG--------------------------CAACCGAAG---CAGCAGCAGCAACCG-AAGCAGCAGCAACAAC--AGATGCAGCAGCAACA------------------------------GAAGCAGCAGCA---ACAG-----------------AAGCAG---CAGCAA------------------------CAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGCAGC--AGAAACAACAGAAGC------------AGCAGCAACA------ACAGAA---GCATC------------AGCAG------------CAGCAACA---GAAGCA----------------------------------------------------------------------------------------------------------G

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
ACAGCAGGACCCACAGCAGGATCCAGAGCCTGAATC-TGGATCGG-----------------------------AGCAGAGTCTGCAGCAG----------------AGCCCA-------------GAA---CAAAAAGAGGAG----------AAGCCA--GTAGCA---------GCA----------------------------------------GCAG---CAGCAGCAG----CAG-----------------------------------------------------------------CAGCAG---CAGCAG-CAGCAGCAGCAGCACA--A---------------------------GAAGTGCCCCATGAACAAGTCCCAGCAAAG---AAGG-----------------A-AGAT---CAAGATCC------GAAT----------------------------CAGCACGCAGAACAGAACC---------------------------------------------------AA------------------------------------------GTA------------------------------GGGGACCGGGTCA-CCG--------AG--------CATGAAC---AGAAGC------AAGGCCCTG---AGC---A---AGAAGAGGA---T---CAGAAGGGG---------GA---GG--------------------------------------------AGGAGGAGGACGACGACG---------ACG---ACG--------------------------------TGTATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAGAACAGAACC---------------------------------------------------AA------------------------------------------GTA------------------------------GGGGA........................................................................................................................................................................................................................................2512.0020000000200
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGC------AAGGCCCTG---AGC---A---AGAAGAGG......................................................................................................................................................2511.0010000000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------------------------CAGCACGCAGAACAGAACC---------------------------------------------------AA------------------------------------------GTA------------------------------GG...........................................................................................................................................................................................................................................2711.0010000000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAGGACGACGACG---------A.............................................18100.1010100000000
.......................................................................................................................................................................................................................................................................................................................CAG---CAGCAG-CAGCAGCAGCAGCACA--.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25120.0810100000000
...............................................................................................................................................................A--GTAGCA---------GCA----------------------------------------GCAG---CAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000010000
..............................................................................................................................................................CA--GTAGCA---------GCA----------------------------------------GCAG---CAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000001000
..................................................................................................................................................................GTAGCA---------GCA----------------------------------------GCAG---CAGCAGCAG----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
droPer2
ACAGCAGCAGCAAATGCAACAGCAGCAGCA----AAT-----------------------GCA------------GCAACAGCAGCAACAG----------------CAACAA----------CAGCAGCAA------------ATGCAGCA-------------------GCAACAGCAACAGCAG-------------------------CAAATG----------------------CAGCA---ACAGCAG---------CAGCAGCA--------GCAA---------CAG---------------CAGCAACAACAG-CAACAACAGCAACAAC--A---------GCAGCAACAACAGCCGCA------------------ACAACAG-----------------------------CAACA------------ACAGCA---G------CAACAG---------CGCTCAC---------------------------------------------------------AG----------------------------------CATCAGCAA----------ACGCA------------------------------GACGAACAGCTT---C-------------------------C------------------------------------------------------AGCAG------------CAACAACA---GC---AGCCCTTGAGCGCCACAGAGAACCTGCAGA---------------------TGGAGGAGTCCGGGCCAGGAC--CTGCCCTCG-----ACAATGGCGGCG---TTAATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................A------------------ACAACAG-----------------------------CAACA------------ACAGCA---G------CAACAG---------.......................................................................................................................................................................................................................................................................................................................................................................................................2650.201010000
......................................................................................................................................................................................................................................................................................................................................................................................................AACAG-----------------------------CAACA------------ACAGCA---G------CAACAG---------.......................................................................................................................................................................................................................................................................................................................................................................................................2390.111010000
.......................................................................................................................................................................................................................................................................................................................CAGCAACAACAG-CAACAACAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
.................................................................................................................................................TGCAGCA-------------------GCAACAGCAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000
....................................................................................................................................................................................................................................................A---ACAGCAG---------CAGCAGCA--------GCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000
......................................................................................................................................................................................................................................................................................................................................................................................................AACAG-----------------------------CAACA------------ACAGCA---G------CAAC..................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
........................................................................................................................................................................................................................................................................................................................................AACAGCAACAAC--A---------GCAGCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
droWil2
ACAGCAGCAACAACAGCAGCAGCAGCAACA---------------------------------------------GCAACAACAGCAGCAG----------------CAACAACAACA----GCAGCAA------------------CAACA-------------ACAGCAGCAGCA-------------------------------------------GCAA----------------------CAG-----------------------CAACAACA---GCAGCAGCAA---CAACAACAG---CAGCAACAACAACAG-CAGCAGCAACAACAGC--AACAGCAACAACAACA------------------------------GCAG---CAGCAACAGCAA-----------------CAGCA------ACAACAGCAGCAGCAGCAG---CAACTGCAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAG--------------CAGCAGC------------AACAGCAACA------GCAACAACATCAGC---AGAAAC---AGCAACAACA---GCAGCAACAGCA---GC-------------------------------------------------------------------AACAGCAA----------C--------AACA--------ACACGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................GCAGCAA------------------CAACA-------------ACAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.15300030
................................................................................................................................................................................................................................................................................................................G---CAGCAACAACAACAG-CA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.15300030
.................................................................................................................................................................................................................................................................................................................................................AGC--AACAGCAACAACAACA------------------------------GCAG---CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
....CAGCAACAACAGCAGCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200020
............................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAA-----------------CAGCA------ACAACAGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................28100.10101000
............................................................................................................................................................................................................................................................................................................................ACAACAG-CAGCAGCAACAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200002
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCA---GC-------------------------------------------------------------------AACAGCAA----------C--------AACA--------ACAC.26140.07101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAG---CAACTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................22170.06101000
...................................................................................................................ACA----GCAGCAA------------------CAACA-------------ACAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
..................................................................................................................................................................................................................................................................................................................................................GC--AACAGCAACAACAACA------------------------------GC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
.............................................................................................................................................................................................................................................................................................................................................................ACAACAACA------------------------------GCAG---CAGCAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
ACAGCAGCAACAACAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................CAA-----------------CAGCA------ACAACAGCAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
.............................................................................................................................................................................................................................................................................................................ACAG---CAGCAACAACAACAG-CA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
....................................................................................................................................................................................................................................................................................AACA---GCAGCAGCAA---CAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100001
..............................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAA-----------------CAGCA------ACAACAGCAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................29200.05100100
.............CAGCAGCAGCAGCAACA---------------------------------------------GCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAG--------------CAGCAGC------------AACAGC.................................................................................................................................................................................19200.05100001
..........CAACAGCAGCAGCAGCAACA---------------------------------------------GCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.................................................................................................................CAACA----GCAGCAA------------------CAACA-------------ACAGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---GCAGCAACAGCA---GC-------------------------------------------------------------------AAC.........................................20200.05100010
......GCAACAACAGCAGCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
...............................................................................................................................................................................................................................................................................................................................................................AACAACA------------------------------GCAG---CAGCAACAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.........................CAACA---------------------------------------------GCAACAACAGCAGCAG----------------CAACAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
.............................................................................................................................................................................................................................................................................................................................................................ACAACAACA------------------------------GCAG---CAGCAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
......................................................................................................................................................................CAGCAGCAGCA-------------------------------------------GCAA----------------------CAG-----------------------CA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
ACAGCAGCAACAACAGCAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.........ACAACAGCAGCAGCAGCAACA---------------------------------------------GC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
......................CAGCAACA---------------------------------------------GCAACAACAGCAGCAG----------------CAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAG--------------CAGCAGC------------AACAGC.................................................................................................................................................................................21200.05101000
.....................GCAGCAACA---------------------------------------------GCAACAACAGCAGCAG----------------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
.............................................................................................................................................................................................................................................................................................................................................................ACAACAACA------------------------------GCAG---CAGCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
..............................................................................................................................................................................GCA-------------------------------------------GCAA----------------------CAG-----------------------CAACAACA---GCAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
............................................................................................................................................................................CAGCA-------------------------------------------GCAA----------------------CAG-----------------------CAACAACA---GCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
..............................................................................................................................................................................................................................AA----------------------CAG-----------------------CAACAACA---GCAGCAGCAA---.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
...............................................................................................................................................................................CA-------------------------------------------GCAA----------------------CAG-----------------------CAACAACA---GCAGCAGCAA---.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
...................CAGCAGCAACA---------------------------------------------GCAACAACAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................AA-----------------CAGCA------ACAACAGCAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
...............................................................................................................................................................................................................................................................................................................AG---CAGCAACAACAACAG-CAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
..........................AACA---------------------------------------------GCAACAACAGCAGCAG----------------CAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................CAA-----------------CAGCA------ACAACAGCAGCAGCAGCAG---......................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
....................................................................................................................................................................................................................................................................................................................................................................................................................CAA-----------------CAGCA------ACAACAGCAGCAGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
..................................................................................CAGCAGCAG----------------CAACAACAACA----GCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100001
.................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAA-----------------CAGCA------ACAACAGCAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
............................................................................................................................................................................................................................................................................................................................................................AACAACAACA------------------------------GCAG---CAGCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100001
.............................................................................................................................................................................................................................CAA----------------------CAG-----------------------CAACAACA---GCAGCAGCAA---CAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAG--------------CAGCAGC------------AACAGC.................................................................................................................................................................................18200.05100010
.......................................................................................................................................................................................................................................................................................................................CAACAACAACAG-CAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000
......................................................................................................................................................................................................................................................................................CA---GCAGCAGCAA---CAACAACAG---CAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100001
.....................................................................................................................A----GCAGCAA------------------CAACA-------------ACAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
......................................................................................................................................................................................................................................................................................................................................................AACAGCAACAACAACA------------------------------GCAG---CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..............................................................................................................................................................................................................................AA----------------------CAG-----------------------CAACAACA---GCAGCAGCAA---CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
..........................AACA---------------------------------------------GCAACAACAGCAGCAG----------------CAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.............................................................................................................................GCAA------------------CAACA-------------ACAGCAGCAGCA-------------------------------------------GCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
...........................................................................................................................................................................................................................................................................................................................AACAACAG-CAGCAGCAACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
................................................................................AACAGCAGCAG----------------CAACAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100001
......................................................................................................................................................................................................................................................................................................................................................AACAGCAACAACAACA------------------------------GCAG---CAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
..............................................................................................................................................................................................................................................................................................................................AACAG-CAGCAGCAACAACAGC--AACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100100
droVir3
ACAGCAGAAGCAGCAGCAGGAAGAGTTGCT---------------------------------------GGAACAGCAAAAGCAGCAGCAG----------------AAAGAA----------CAACAGCAG------------AAGGAGAA-------------GCA------GCAGCAGAAAA-------------------------------------AG---------CTG----CTG------GAAGAG---------CAGAAG-----C---AGCAG---------------CAGGAA---GAGCTGCTGAAACAA-CAAAAGCGA------C--AGCAGGAAGAGAAGCG---------ACA------------------GCAGGAAGAGCA---ACAG-----------------CGGAAG---GAGCAGCT------GCAGCAGCAG------GAGGAGCTGCTGAAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------CAGAAGC------------AGCAGCAAGA------AGAGCAACAGCAAA---A---GGAGCAGCAGCAACT------------AG--------------------------AAGA-----------GCA-------GGA-----------------GCG---ACA--------------------------------ACAGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................GAGAAGCG---------ACA------------------GCAGGAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000010100000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGC------------AGCAGCAAGA------AGAGC..................................................................................................................................................................2011.001000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................GA------C--AGCAGGAAGAGAAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000001000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................A---ACAG-----------------CGGAAG---GAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................AAAAGCGA------C--AGCAGGAAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000100000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAAG---GAGCAGCT------GCAGCAGCAG------GA..............................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................T------GCAGCAGCAG------GAGGAGCT........................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................AGCGA------C--AGCAGGAAGAGAAGCG---------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000010000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAAA---A---GGAGCAGCAGC.......................................................................................................................................2111.001000001000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAAGA------AGAGCAACAGC............................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................GCGA------C--AGCAGGAAGAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000100000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................AGAAGCG---------ACA------------------GCAGGAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................AAAA-------------------------------------AG---------CTG----CTG------GAAGAG---------CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000100000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................A------C--AGCAGGAAGAGAAGCG---------ACA------------------GCAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................AG------------AAGGAGAA-------------GCA------GCAGCAGAAAA-------------------------------------AG---------CT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................GCTGAAACAA-CAAAAGCGA------C--.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000100000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCA---ACAG-----------------CGGAAG---GAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
......................................................................................AGCAG----------------AAAGAA----------CAACAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000010000000000000000000000000000000000000000
...................GAAGAGTTGCT---------------------------------------GGAACAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
................................................................................................................................................................................AGCAGAAAA-------------------------------------AG---------CTG----CTG------GAAGAG---------CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................AGCA---ACAG-----------------CGGAAG---GAGCAGCT------................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000010000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAGA------AGAGCAACAGC............................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................GAA----------CAACAGCAG------------AAGGAGAA-------------GCA------GC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................AGAAAA-------------------------------------AG---------CTG----CTG------GAAGAG---------CAGAAG-----C---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000001000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................AAAA-------------------------------------AG---------CTG----CTG------GAAGAG---------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GAAGCG---------ACA------------------GCAGGAAGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................AACAA-CAAAAGCGA------C--AGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................CAACAGCAG------------AAGGAGAA-------------GCA------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................................................................................................................CAAAAGCGA------C--AGCAGGAAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACT------------AG--------------------------AAGA-----------GCA-------GGA-----------------GC............................................2111.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCAACAGCAAA---A---GGAGCAG...........................................................................................................................................2211.001000001000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------CAGAAGC------------AGCA...................................................................................................................................................................................1830.672000000000000000000000000000002000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCT------GCAGCAGCAG------GAGGAG..........................................................................................................................................................................................................................................................................................................................................................................................................2220.501000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCAACAGCAAA---A---GGA...............................................................................................................................................1820.501000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................A------------------GCAGGAAGAGCA---ACAG-----------------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501000000010000000000000000000000000000000000000000000000000000000
.....AGAAGCAGCAGCAGGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.331000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................AGAAG-----C---AGCAG---------------CAGGAA---G..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.331000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------CAGAAGC------------AGCAG..................................................................................................................................................................................1930.331000000000000000000000000000000000100000000000000000000000000000
..........................................................................................................................................................................................................................................................................GAAG-----C---AGCAG---------------CAGGAA---GAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.251000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................AG---GAGCAGCT------GCAGCAGCAG------GT..............................................................................................................................................................................................................................................................................................................................................................................................................2260.171000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------CAGAAGC------------AGCAGCA................................................................................................................................................................................19200.051000000000000000000000000000000100000000000000000000000000000000
droMoj3
GCAGCAGCAACAGCAGCAGCAGCAACAGCA---------------------------------------------GCAGCAGCAGCAGCAG----------------CAACAGCAGCA----GCAGCAGCAG------------CAGCAGCA-------------------GCAGCAGCAGCAACAG-------------------------CAGCAG----------------------CAGCA---GCAGCAG---------CAGCAACA--------GCAG---------CAGCAACAACAG---CAGCAACAGCAGCAG-CAA------------C--A---------GCAGCAACAGCAGCAACA------------------GCAGCAA-----------------------------CAGCA------------ACAGCA---A------CAACAG---------CAGTAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--CAA---CAGCAGC------------AGCAGAAACAGCAGC------A---GCAGC---A---GCAGCAGCAGCAACAGCAGCAGCAGCAGCA---GC-------------------------------------------------------A---------ACA---GCA--------------------------------ACGACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................................................................CAG-CAA------------C--A---------GCAGCAACAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.204400000
...............................................................................CAGCAGCAGCAG----------------CAACAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.204020020
..........................................................................................................................GCAGCAGCAG------------CAGCAGCA-------------------GCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.153300000
............................................................................................................................................................................................................................................................CAG---------CAGCAACA--------GCAG---------CAGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.153000030
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC------A---GCAGC---A---GCAGCAGCAGC.......................................................................................................................................22200.102020000
................................................................................................................................................................................................................................................................................................................................CAG-CAA------------C--A---------GCAGCAACAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102020000
.............................................................................................................................................................................................................................................................................ACA--------GCAG---------CAGCAACAACAG---C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000020
..............................................................................................................................................................................................................................................................................................................CAG---CAGCAACAGCAGCAG-C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102200000
.................................................................................................................................................................................................................................................................................................................................AG-CAA------------C--A---------GCAGCAACAGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102200000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--CAA---CAGCAGC------------AGCAGAAA...............................................................................................................................................................................19160.061100000
..............................................................................................................................................................................................................................................................................................................CAG---CAGCAACAGCAGCAG-CAA------------C--.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000001
........................................................................................................................................................................................................................................................GCAGCAG---------CAGCAACA--------GCAG---------CAGCAACAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.051000010
.......................................................................................................................................................................................................................................................................................................................CAACAGCAGCAG-CAA------------C--A---------GCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCA---GC-------------------------------------------------------A---------ACA---GC......................................21200.051100000
...........................................................................................................CAACAGCAGCA----GCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAGCAGCA.............................................................................................................................18200.051000010
............................................................................................................................................................................................................................................................................................................................GCAGCAG-CAA------------C--A---------GCAGCAACAGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--CAA---CAGCAGC------------AGCAGAA................................................................................................................................................................................22200.051100000
..............................................................................................................................................................................................................................................................................................................................................................................AACA------------------GCAGCAA-----------------------------CAGCA------------ACAGCA---.............................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
.....................GCAACAGCA---------------------------------------------GCAGCAGCAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
.........................................................................................................................................................................................................................................................................AGCAACA--------GCAG---------CAGCAACAACAG---CAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCAGCAGCA---GC-------------------------------------------------------........................................................26200.051000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAGCAGCA---GC-------------------------------------------------------A---------ACA---........................................25200.051000010
.................................................................................................................................................................................GCAGCAACAG-------------------------CAGCAG----------------------CAGCA---GCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000010
........................................................................................................................................................................................................................................................................................GCAG---------CAGCAACAACAG---CAGCAACAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAACAGCAGCAGCAGCA.......................................................................................................................26200.051100000
.................................................................................................................................................AGCAGCA-------------------GCAGCAGCAGCAACAG-------------------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
...........................................................................................................................................................................................................................................................GCAG---------CAGCAACA--------GCAG---------CA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000010
......................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACA------------------GCAGCAA-----------------------------CAGCA------------AC....................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
........................................................................................................................................................................................................................................................................CAGCAACA--------GCAG---------CAGCAACAACAG---...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000010
......................CAACAGCA---------------------------------------------GCAGCAGCAGCAGCAG----------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
.........................................................................................................................................................................................................................................................................................................AACAACAG---CAGCAACAGCAGCAG-C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
..........................................................................................................................................................................................................................................................................................................ACAACAG---CAGCAACAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051100000
..........................................................................................G----------------CAACAGCAGCA----GCAGCAGCAG------------CA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
.............................................................................................................................................................................................................................................................................ACA--------GCAG---------CAGCAACAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051100000
............................................................................................................................................................................................................................................................................AACA--------GCAG---------CAGCAACAACAG---CAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
.......................................................................................GCAG----------------CAACAGCAGCA----GCAGCAGCAG------------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000010
...........................................................................GCAGCAGCAGCAGCAG----------------CAACAGCAGCA----.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
.................AGCAGCAACAGCA---------------------------------------------GCAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
.............................................................................................................................................................................................................................................................................................................ACAG---CAGCAACAGCAGCAG-CAA------------C--.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
.............................A---------------------------------------------GCAGCAGCAGCAGCAG----------------CAACAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000010
........................................................................................................................................................................................................................................................GCAGCAG---------CAGCAACA--------GCAG---------CAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAACAGCAGCAGCA..........................................................................................................................24200.051010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAGCAGC.....................................................................................................................19200.051000010
..................................................................................................................................................................................................................................................GCA---GCAGCAG---------CAGCAACA--------GCAG---------CAGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.051000010
............................................................................................................................................................................CAGCAGCAGCAACAG-------------------------CAGCAG----------------------CAGCA---.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
.................................................................................................................................................AGCAGCA-------------------GCAGCAGCAGCAACAG-------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAGCAGC------A---GCAGC---A---GCAGCA............................................................................................................................................23200.051100000
.....................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAACA------------------GCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000
........................................................................................................................................................................................................................................................................................................CAACAACAG---CAGCAACAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
...........................................................................................................CAACAGCAGCA----GCAGCAGCAG------------CAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
droGri2
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCA---------------------------------------------GCAGCAGCAGCAGCAG----------------CAGCAGCAGCA----GCAGCAGCAG------------CAGCAGCA-------------------GCAGCAGCAGCAGCAG-------------------------CAGCAG----------------------CAGCA---GCAGCAG---------CAGCAGCA--------GCAG---------CAG---------------CAGCAGCAGCAG-CAGCAGCAGCAGCAGC--A---------GCAGCAGCAGCAGCAGCA------------------GCAGCAG-----------------------------CAGCA------------GCA---GCAG------CAGCAGTTAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGCAGC--AGCAT---CAGCAGC------------AGCAAAAACAGC---AGC---A---GCAAC---A---GCAGCATCAGCAG---------CAGCAGCA---GCAGCT-----------------------AAAAC-----------------------A---------ACA---ACA--------------------------------ACAGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
ACAGCAGCAGCAACAGCAGCAGATGCAACT---------------------------------------GGC------------GCAGCAG----------------CAGCAA-----G-----CGCT---------------------GCA----------------------------GCAACACCACCAGCACCTC-----------------------------------------CAGCAGCAG-----------------------CACCAGCA---ACAGCAGCAA---CAACAACAG---CAGCAACAGCAACAG-CAGCAGCAACAACAAC--AACAGCAGCAGCAGCA------------------------------GAAGCTGAAACA---GTCG-----------------CA--------------------------------------------------------------GG------------------------------------------------CGGCAAGTGCGGCAGCCAACAACAAGGCCACCAACCTGACCAAGGACTCGCCCAAGCA------------------------------GAAGAACAGCTCGGCCG--------AG--------GAGGAAC---AGCAGC------------------------A---ACAGC------------AGCAGCT---------------GAA---GG--------------------TGAA-----------GCA-------GGA-----------------GGGCCAGAAG--C---CGACG--------ATGG--------AAACGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCT---------------GAA---GG--------------------TGAA-----------GCA-------GGA-----------------GGGCCA........................................2413.003000003
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT---------------GAA---GG--------------------TGAA-----------GCA-------GGA-----------------GGGCCA........................................2312.002000002
.........GCAACAGCAGCAGATGCAACT---------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CG--------AG--------GAGGAAC---AGCAGC------------------------A---ACAGC------------AGC..........................................................................................................................................2611.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCGGCCG--------AG--------GAGGAAC---AG..............................................................................................................................................................................................2011.001100000
........................................................................................................................................................................................CACCACCAGCACCTC-----------------------------------------CAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------GAAGAACAGCTCGGCCG--------AG--------GA........................................................................................................................................................................................................2211.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------------AGCAGCT---------------GAA---GG--------------------TGAA-----------GC..........................................................................2011.001100000
.....................................................................................................................................................GCA----------------------------GCAACACCACCAGCACCTC-----------------------------------------CAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
........................................................................................................................................................................................................................................................................................................................................AGCAACAACAAC--AACAGCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.251010000
.....AGCAGCAACAGCAGCAGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.171010000
...............................................................................................................................................................................................................................................................................................................................ACAG-CAGCAGCAACAACAAC--AACAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.171010000
.......................................................................................................................................................................................................................................................................................................................................CAGCAACAACAAC--AACAGCAGCAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2760.171100000
.........................................................................................................................................................................................................................................................................................................................................GCAACAACAAC--AACAGCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.141010000
..............................................................................................................................................................................................................................................................................................................................AACAG-CAGCAGCAACAACAAC--.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102020000
..............................................................................................................................................................................................................................................................................................................................................AACAAC--AACAGCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102020000
......................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAAC--AACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102000002
..................................................................................................................................................................................................................................................GCAGCAG-----------------------CACCAGCA---ACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.081100000
...........................................................................................................................................................................................................................................................................................................................AGCAACAG-CAGCAGCAACAACAAC--A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25140.071010000
...........................................................................................................................................................................................................................................................................................................CAACAG---CAGCAACAGCAACAG-CAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28160.061010000
..................................................................................................................................................................................................................................................................................................CAA---CAACAACAG---CAGCAACAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22170.061010000
...................................................................................................................................................................................................................................................................................................................................................C--AACAGCAGCAGCAGCA------------------------------GAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.061100000
....................................................................................................................................................................................................................................................................................................A---CAACAACAG---CAGCAACAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.061010000
..............................................................................................................................................................................................................................................................................................GCAGCAA---CAACAACAG---CA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
.............................................................................................................................................................................................................................................................................................................................................CAACAAC--AACAGCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000001
.CAGCAGCAGCAACAGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
............................................................................................................................................................................................................................................................................................................................................ACAACAAC--AACAGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000100
............................................................................................................................................................................................................................................................................................................................................ACAACAAC--AACAGCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
...............................................................................................................................................................................................................................................................................................................................ACAG-CAGCAGCAACAACAAC--.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
............................................................................................................................................................................................................................................................................................................................................ACAACAAC--AACAGCAGCAGCAGCA------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000001
.....................................................................................................................................................................................................................................................................................................................AGCAACAGCAACAG-CAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
................................................................................................................................................................................................................................................................................................................................CAG-CAGCAGCAACAACAAC--AACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
................................................................................................................................................................................................................................................................................................................G---CAGCAACAGCAACAG-CAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
.......................................................................................................................................................................................................................................................................................................................................CAGCAACAACAAC--AACAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
........................................................................................................................................................................................................................................................................................................................................AGCAACAACAAC--AACAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
................................................................................................................................................................................................................................................................................................................G---CAGCAACAGCAACAG-CAGCAGCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
........................................................................................................................................................................................................................................................................................................................AACAGCAACAG-CAGCAGCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
...............................................................................................................................................................................................................................................................................................................................................ACAAC--AACAGCAGCAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000001
.............................................................................................................................................................................................................................................................................................................................CAACAG-CAGCAGCAACAACAAC--A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
..............................................................................................................................................................................................................................................................................................................................AACAG-CAGCAGCAACAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
........................................................................................................................................................................................................................................................................................................................................AGCAACAACAAC--AACAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
..................................................................................................................................................................................................................................................................................................CAA---CAACAACAG---CAGCAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000001
..........................................................................................................................................................................................................................................................................................................................................CAACAACAAC--AACAGCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
.......................................................................................................................................................................................................................................................................................A---ACAGCAGCAA---CAACAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000
.....................................................................................................................................................................................................................................................................................................................AGCAACAGCAACAG-CAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000
.........................................................................................................................................................................................................................................................................................................................................GCAACAACAAC--AACAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
droBip1
ACGGCGGCAGCGGCAACATCAACCTCAGCCACA-TC-TGCAGCGG-----------------------------GG------------CAG----------------CAACAG---GT----ACAGGAG---CTACAGCAGTAG----------CAGTAG--GGAGCA---------GTA----------------------------------------GCAG---TACAACCAC---------------------------------------------------------------------------------CACCAG-CAGCAGCAGCACCAGCACAACCACATCTTGTGCC------------------------------ACATCCACAGCA-------------------------------------------------------------------------------------------CAGCGCCACCAAGACACCTCCTCAGATGACGTCCTGGACACTCACAG------------------------------------------------------A---GTCAAGGACCAGGTGCAGCCGGC------CG------------------------AC--------GAGCTG---------------------------------------CTTC------------AGGAG------------------GA---GCTACTG-----------GCCGGTGGCCGAAACGAGG---AGGACGACGACGACGACC---------ACC---ACC--------------------------------ACTTGSizeHit CountTotal NormTotal
No Reads
droKik1
GGAGCAAAAGCTGCTACAGGAGCAAAAGCA---------------------------------------------GCAACAGGAGCAAAAG----------------CTGCAACAGGA----GCAAAAG------------------GAGCA-------------AAA------GCAGCAGCAGGAG-------------------------CAAA------AG---------CAG----CAA------CAGGAG---------CAAAAG-----CA---GCAACAGG---------------------AGCAACAGGAGTCA-CAGGAGTCA------C--AGGAGCTACAGGAGCC------------------------------ACAGCAGCAACAAGAGCCA-----------------CAGGA------GCCTCAGCA---GCAGCAGGAG------CCACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGCCAC--AG------GAGCCAC------------AGGAGCAACAGCAGCAACAGCA---GC------A---AC---AGCAGCAACA------GGAGCAACA---GGAGTC-----------------------AAAGGA---------------------G------------C---AA----C----------------------------AGG-ASizeHit CountTotal NormTotal
No Reads
droFic1
GCCACAAGACCTCCGGCACGGGCAGCGATC------------------------------TGGG---------------------CAACA-TATCGGAGAACGGA-----------------CTGATGA------------------CCACGGCGGACATCC-----A---CCACCA-------------------------------------------CCAACAGCAGCA----GCAGCAGCA---G--------------------------------------------------------------CAG---CAGCAG-CAGCAGCAACAGCA--------------------------------GC---------------------AGCAGCA---G-AGCAGTGCAGCCAGGCAGGA-GGAG----ATGAGCC------GACT----------------------------CA-----------------------------------------------------------------------------------------------ACGCCG------------------------------GACTGGACAAGCC-CGCCGCCGCGGTG-GCC--------ACT-------CTGAAGA------------GGAAGC---------------------------A---GA---AGCAG------------------AC---CA--------------------------------GCA---AGCAGCAGCAGCAGCAGA---------GCG---CCG--------------------------------ACGGCSizeHit CountTotal NormTotal
No Reads
droEle1
ACAACAACAGCCAGCACAAAAG--ACAGCT----------AACGAACGCCAAGCAAGACAATGA---------------------CGACA-TGTTGAAAAACAAAAATTATTT----------CAATAG------------------TAAAAACAAAAGTAT-----A---GCAACA-------------------------------------------GCAACAACAG---CA-GCAGCAGCAGCAG-----------------------CAACAGTA---ACAGCAGCGA---AAGCGACAG---CAACATCAGCCAGCA-CAGCAGCAACTTCTGG--AGGTGGAGCGGGAACG------------------------------GGAACGGGAGCG---GGAA-----------------------------------------------------------------CGGGTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG--------GAACGG------GAGC---------------------------------------------AACAG------------------GA---GTTGCTG-----------GTGGAAAAGCCAGAGGA---------------------G------------G---AG----CAGGCGGCGGTCCAAC---AATGTCGCCAACA-TSizeHit CountTotal NormTotal
No Reads
droRho1
GCAACAGCAATCGCCGTTGCATTCGCCGGC---------GAACGA-----------------------------AG------------TTG----------------CAATAG---CC----ACAGAAC---------------A-----------GCCA--GAAGTT---------GCAGTTG-------------------------------------------CAGCAGCAG----CAG--------------------------------------------------------CAGCAG---CAGCAGCTCCAGTTGCCACTAGCAACATCAAG--AGCGGCAGCA---------ACAGCA---GC---------------------AGCATCA---A--------------------TCACA------------CCGGCA---A------CAATAG---------CAGT--------------------------------------------------------------------------------------------------------------CAGC----------AGGACGAGGAGGAACTG-----------------------------------------------------------------------------------------GACGAGGA---T---GAGGAGGA---------------CGA---GG--------------------------------------AGGAGGACGAGGACGAGG---------ACG---ATG-AGG----------------------------AGG-ASizeHit CountTotal NormTotal
No Reads
droBia1
GCAGCAACAACAGCAGCAGCAGCAACAGCA---------------------------------------------GCAGCACCAGCAGCAG----------------CAACAC-----G-----CCCA---------------------GCA-------------GCT------GCAGCA---------CCAGCA-----------------------------------------GCTGCAGCAGCAG-----------------------CACGTGCA---GCAGCAGCAA---CACCAGCAG---CAGCAACACCACCAC-CACCAGCAACACCAGC--AGCTGCATCACGATCC------------------------------GCAGCAACAGCA---TCCG-----------------CAGTAC---CACCCGCA------CCAGCTGCAC------GCCCACGCCCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------CCC--------AC--------CAGCAGC------------AGCAGCAACAGCAGC------A---GCAAC---A---GCAGCAGCAGCAACA------GCA---ACAGCAGCAGCTC-----------CACGGCGATCCCGACGA---------------------C-------------------------------------------------------GSizeHit CountTotal NormTotal
No Reads
droTak1
GCAGCAACACTCGCAACAGCAGCAGCACTC------------------------------GCAGCAACATGC---------CCAGCAGCTG----------------CAACAT-----G-----CGCA---------------------ACA------------------------------------------------------------------------------------GCTGCAGCAGCAACA---CTCGCAGCAGCAG-----CACCACTC---GCAGCAGCAG---CAGCACTCG---CAGCAACATCACCAC-CACCAGCAACACCAGC--AGCTGCATCTCGATCC------------------------------GCAGCAGCAGCA---TCCG-----------------CAGTACGGTCATCCCCA------CCAGCTGCAC------GCCCATGCGCTGCCCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--------CAGCAGCAACAGCAGCAGCA------------------------GCAGC---AGCAGC---AACAGCAACA---GCAGCAGCAGCA---GCAGCTG-----------CACGGCGATCCCGATGA---------------------C-------------------------------------------------------GSizeHit CountTotal NormTotal
No Reads
droEug1
ACAGCAGCAGCAACAGCAAATGCAAATTGC---------------------------------------------CCA------GCAGCAA----------------CAGCAG-----G-----CGAT---------------------TCA-------------ACA------ACAT---------CATCAGCACCTT-----------------------------------------CAACAGCAA-----------------------CACC---A---ACAGCAGCAA---CAGCAGCAG---CAACAACATCAACAG-CAGCAGCAACAACAAC--AGCAGCAGCAA---------CAACA---GC---------------------AACAG-----------------------------------CAAAAACT---GAA---A------C-----------------------AGTCGCAGG------------------------------------------------CGGCAAGTGCGGCGGCCAATAACAAGGCCACCAACCTGACGAAGGACTCGCCCAAACA-------------------------AAAG-GGTGGCGATG----ACG----------------------------------------------------------------ATC------------AGCCACTGAA---GGTGAA----------------------------------------------GCA-------GGA-----------------GGGTCAGAAG--C---CGACC--------ATGG--------AAACGSizeHit CountTotal NormTotal
No Reads
dm3
GCAGCAACAGCAACAGCAGCAGCAACAGTC---------------------------------------------GCAGCACCAGCAACAG----------------CACCAACAGCA----GCAC------------------GCCCAGCA-------------ACT------GCAGCACCAACA--------------------------------------------------GCTGCAGCAGCAACA---CGCCCAGCAGCATCAG--------------------------------CAG---CAACAGCACCACCTC-CACCAGCAGCACCAGC--AGCTGCATCACGATCC------------------------------GCAGCAGCAGCA---TCCG-----------------CAGTAC---CATCCGCA------CCAGCTGCAC------GCCCATGCCCTGCCTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--------CAGCAGC------------AGCAGCAACAGC------AGCA---ACAACAGCA---GC---AGCAG------------------CA---GCAGCTG-----------CACGGCGATCCCGACGA---------------------C------------G---AGG--------------------------------AGGTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................CAGCAACAGTC---------------------------------------------GCAGCACCAGCAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CAGCAACAGCAGCAGCAACAGTC---------------------------------------------G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2431.6750000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000110000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGCGATCCCGACGA---------------------C------------G---AGG--------------------------------AG...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................GCAGCAACA---CGCCCAGCAGCATCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................A-------------ACT------GCAGCACCAACA--------------------------------------------------GC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AACAGCAGCAGCAACAGTC---------------------------------------------GC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................ACCAACA--------------------------------------------------GCTGCAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CAACAGCAGCAGCAACAGTC---------------------------------------------GCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCAC------GCCCATGCCCTGCCT.................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AGCA---ACAACAGCA---GC---AGCAG------------------......................................................................................................................21200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.....................................................................................CAACAG----------------CACCAACAGCA----GC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGC------AGCA---ACAACAGCA---GC---AG...........................................................................................................................................23190.2140000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---ACAACAGCA---GC---AGCAG------------------C.....................................................................................................................19200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
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......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC------------AGCAGCAACAGC------AGCA---ACAAC.........................................................................................................................................................2770.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGC------AGCA---ACAACAGCA---GC---AGCAG------------------CA---.................................................................................................................2970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--------CAGCAGC------------AGCAGCAA...............................................................................................................................................................................1980.1310000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AGCA---ACAACAGCA---GC---AGCAG------------------CA---GC...............................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000
.....................................................................................................................................................................................................................................................................CAGCATCAG--------------------------------CAG---CAACAGCACCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................ACA--------------------------------------------------GCTGCAGCAGCAACA---.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.1010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GCAGCAACAGCAACAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---ACAACAGCA---GC---AGCAG------------------CA---.................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGC------AGCA---ACAACAGCA---GC---AGC..........................................................................................................................................28100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGC------AGCA---ACAACAGCA---GC---AGC..........................................................................................................................................27110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................AGCATCAG--------------------------------CAG---CAACAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGC------AGCA---ACAACAGCA---GC---AG...........................................................................................................................................26110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGC------AGCA---ACAACAGCA---GC---.............................................................................................................................................25110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------AGCAGCAACAGC------AGCA---ACAACA........................................................................................................................................................23170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGC------AGCA---ACAACAGCA---GC---AGCA.........................................................................................................................................26170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGC------AGCA---ACAACAGCA---GC---AGCA.........................................................................................................................................25170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............AGCAGCAGCAACAGTC---------------------------------------------GCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20190.0510000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.....AACAGCAACAGCAGCAGCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--------CAGCAGC------------AGCAGCAACAGC------.....................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---ACAACAGCA---GC---AGCAG------------------......................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGC------AGCA---ACAACAGCA---GC---.............................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---ACAACAGCA---GC---AGCAG------------------CA---G................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGC------------AGCAGCAACAGC------AG...................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCA---GC---AGCAG------------------CA---GCAGC............................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC------AGCA---ACAACAGCA---GC---AGCA.........................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--------CAGCAGC------------AGCAGCA................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA---ACAACAGCA---GC---AGCAG------------------......................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GCAACAGCAGCAGCAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGC------------AGCAGCAACAGC------AGCA---A.............................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------AGCA---ACAACAGCA---GC---AGCAG------------------CA---GCA..............................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------AGCA---ACAACAGCA---GC---AGCAG------------------CA---G................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---ACAACAGCA---GC---AGCAG------------------CA---GCAG.............................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AGCA---ACAACAGCA---GC---AGCAG------------------CA---.................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---ACAACAGCA---GC---AGCAG------------------CA---G................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
GCAGCAGCAGCAGCAGCAGCAGCAGCATGA---TAAT-----------------------GGACCAACG-TC---------CCATCATTTG----------------CATCAA-----TCAT-------C---------------------------------------------------------TATCAGCATCTCTAATCAGCAGAATAAAGCGACGCAACAGCAGCA----GCAGCAG-----------------------------------------------------------------CAGCAA---CACCAA-AAGCAGCAACAACAAC--A---------------------------GGCTTCCAGCATGTCCGCGTATCAGCAACG---CCTG-----------------C--CAT---CAAATGCA------GCAT----------------------------CCATTCACAGGTGAGTGCC---------------------------------------------------AAAGTTGGCAACAATC-CATAC---------------------A---TNGGAGGAGGAGGAGGAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-AGG----------------------------AGG-ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-AG..................................27116.0016100000000000015000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-AGG----------------------------AA...2719.00900000000000018000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGAGGAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------............................................2713.00300030000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AG......................................2712.00200010000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-AGG----------------------------.....2512.00211000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AG......................................2612.00200000000000002000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-AG..................................2612.00200020000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-AGG----------------------------A....2231.33400000000000004000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAGGAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGA..................................................................2411.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TTCCAGCATGTCCGCGTATCAGCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-AGG----------------------------A....2511.00110000000000000000
.....................................................................................................................................................................................................TCTAATCAGCAGAATAAAGCGACGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
............GCAGCAGCAGCAGCATGA---TAAT-----------------------GGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000010000000
.......................................................................................................................CAT-------C---------------------------------------------------------TATCAGCATCTCTAATCAGCAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAGGAGGAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GA.....................................................................2411.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGAGGAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------............................................2611.00100000000000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-AGG----------------------------AG...2611.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-AGG----------------------------AG...2411.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGCA------GCAT----------------------------CCATTCACAG......................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
.................AGCAGCAGCATGA---TAAT-----------------------GGACCAACG-T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-AGG----------------------------AG...2711.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-AGG----------------------------AGG-A2911.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGA..................................................................2211.00100000000000001000
.............................................................................................................................................................................................................................................................................................................................CACCAA-AAGCAGCAACAACAAC--A---------------------------GGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-A...................................2411.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-AGG----------------------------A....2911.00100000000000010000
.........GCAGCAGCAGCAGCAGCATGA---..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.75300000300000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-A...................................2160.67400000400000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------G......................................................................1920.50100001000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------............................................1840.50200000200000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---A.......................................2040.50200000200000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-....................................2240.50200000200000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAGGAGGAGGAGG-----------------------------------------------------------------------------------------------------------CGGC.........................................................................................................................................2120.50100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AG......................................2420.50100000000000001000
.................AGCAGCAGCATGA---TAAT-----------------------G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-AGG----------------------------AA...2420.50100000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-G...................................2630.33100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGAGGAGG-----------------------------------------------------------------------------------------------------------CGGCGG.......................................................................................................................................1930.33100000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-....................................2340.25110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG-----------------------------------------------------------------------------------------------------------CGGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-....................................2160.17110000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-AGG----------------------------AGG-.20200.15300000000000003000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-AGG----------------------------A....2170.14100000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-AGG----------------------------A....20120.08100000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAG--------------------------------------------------------------GAGGAG---------------------G---AGG-AGG----------------------------AG...18200.05110000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-AGG----------------------------A....19200.05100000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAG--------------------------------------------------------------GAGGAG---------------------G---AGG-A...................................16200.05100000000010000000
droSec2
GCAGCAGCAGCAGCAGCATGATAATGGACC-----------------------------------AACG-TC---------CCATCATTTG----------------CATCAA-----TCAT-------C---------------------------------------------------------TATCAGCATCTCTAATCAGCAGAATAAAGCGACGCAA------------------------------------------------------------------------CAGCAGCAGCAGCAGCAA---CACCAA-AAGCAGCAACAACAAC--A---------------------------GGCTTCCAGCATGTCCGCGTATCAGCAACG---CCTG-----------------C--CAT---CAAATGCA------GCAT----------------------------CCATTCACAGGTGAGTGCC---------------------------------------------------AAAGTTGGCAACAAGA-AAT----G-----------TGGGCAAAGGG------------------------------GAG--------------GAGGGG--------------GT------------------------------------A---GGAAGAGGA---GA---AGGAG------------------AA---GG--------------------------------AGG---AGGAGGAGGAGGAGGAGG---------AGG---AGG--------------------------------AGGAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................................................................................................................................................................................................................................................................................................................................................AC--A---------------------------GGCTTCCAGCATGTCCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
....................................................................................................................................................................................................................AAAGCGACGCAA------------------------------------------------------------------------CAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAACG---CCTG-----------------C--CAT---CAAATGCA------GC..............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
...........................................................................................................................................................................................TATCAGCATCTCTAATCAGCAGAATAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
..................................................................................................................................................................................................................ATAAAGCGACGCAA------------------------------------------------------------------------CAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.............................................................................................................................................................................................................................................................................................................................CACCAA-AAGCAGCAACAACAAC--.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---AGGAG------------------AA---GG--------------------------------AGG---AGGAGGA..................................................................2020.5010100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GG--------------------------------AGG---AGGAGGAGGAGGAGGAGG---------AG............................................26200.2550401
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---GG--------------------------------AGG---AGGAGGAGGAGGAGGAGG---------..............................................2540.2510001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------------AGG---AGGAGGAGGAGGAGGAGG---------A.............................................23200.2555000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAGGAGGAGGAGG---------AGG---AGG--------------------------------A....24200.2042200
.............................................................................................................................................................................................................................CAA------------------------------------------------------------------------CAGCAGCAGCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1530030
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGAGGAGGAGG---------AGG---AGG--------------------------------A....23200.1530003
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGAGGAGG---------AGG---AGG--------------------------------AGGA.23200.1530003
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---AGGAGGAGGAGGAGGAGG---------AGG---A.......................................23200.1530003
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAG------------------AA---GG--------------------------------AGG---AGGAGGAGG................................................................2080.1310010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAGGAGGAGGAGG---------AGG---AGG--------------------------------AG...25200.1021100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG---AGGAGGAGGAGGAGGAGG---------AGG---A.......................................24200.1022000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG--------------------------------AGG---AGGAGGAGGAGGAGGAGG---------A.............................................24200.1022000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG--------------------------------AGG---AGGAGGAGGAGGAGGAGG---------AG............................................25200.1021100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG---AGGAGGAGGAGGAGGAGG---------AGG---AG......................................25200.1021100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAGGAGGAGG---------AGG---AGG--------------------------------AGGA.24200.1022000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAGGAGGAGG---------AGG---AGG--------------------------------AGGAG25200.1021100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAG------------------AA---GG--------------------------------AGG---AGGAGGA..................................................................18130.0810100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGAGGAGGAGG---------AGG---AGG--------------------------------A....22200.0510010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG--------------------------------AGG---AGGAGGAGGAGGAGGA.........................................................21200.0510100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGAGGAGGAGGAGG---------AGG---A.......................................22200.0510010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGAGGAGG---------AGG---AGG--------------------------------AGGAG24200.0511000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGAGGAGGAGG---------AGG---AGG--------------------------------AGGA.26200.0511000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG---AGGAGGAGGAGGAGGAGG---------AGG---AG......................................26200.0510001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGG---AGGAGGAGGAGGAGGAGG---------A.............................................22200.0510010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------------AGG---AGGAGGAGGAGGAGGAGG---------AGG---A.......................................26200.0511000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------AA---GG--------------------------------AGG---AGGAGGAGGA...............................................................18200.0511000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GG--------------------------------AGG---AGGAGGAGGAGGAGGAGG---------A.............................................25200.0510100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---AGGAGGAGGAGGAGGAGG---------AGG---AGG--------------------------------A....26200.0511000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGAGGAGGAGG---------AGG---AGG--------------------------------AG...24200.0511000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---AGGAGGAGGAGGAGGAGG---------AGG---AG......................................24200.0511000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGAGGAGG---------AGG---AGG--------------------------------AGGA.22200.0510010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGAGGAGGAGGAGG---------AGG---AGG--------------------------------AG...26200.0510001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGAGGAGGAGG---------AGG---AGG--------------------------------AGGAG26200.0510001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------------AGG---AGGAGGAGGAGGAGGAGG---------AG............................................24200.0511000
droYak3
GTCGCAGCACCAGCAGCAGCACGCCCAGCA---------------------------------------------G------------CTG----------------CAACAC---CA----ACA---------------------------------------------------------------------------------------------------------------GCTGCAGCAGCAACA---CGCCCAGCAGCATCAG--------------------------CAGCAGCAG---CAGCAACACCATCTA-CACCAGCAGCACCAGC--AGCTGCATCACGATCC------------------------------GCAGCAACAGCA---TCCG-----------------CAGTAC---CATCCGCA------CCAGCTGCAC------GCCCATGCGCTGCCAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--------CAGCAGC------------AGCAGCAGCA------ACAGCA---GCAACAACA---GC---AGCA------------------GCA---GCAGCTG-----------CACGGCGATCCCGACG---------------------------------ACG---ACG--------------------------------ACGTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA------ACAGCA---GCAACAACA---GC---AGC..........................................................................................................................................27150.07100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------ACAGCA---GCAACAACA---GC---AGCA------------------GC.....................................................................................................................24200.05101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACA---GC---AGCA------------------GCA---GCAGC............................................................................................................23200.05101000000000
.........................................................................................................................................................................................................................................................................ATCAG--------------------------CAGCAGCAG---CAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------ACAGCA---GCAACAACA---GC---AGCA------------------.......................................................................................................................23200.05101000000000
droEre2
GAAGCAGCAGCAACAACAGAAGCAGCAGGA---------------------------------------------ACCACAGAAGCAGCAG----------------CAGCAACCGAA----CCAGCAG------------------CAGCA-------------ACCGAACCAGCA-------------------------------------------GCAACAACAG---AA-GCAGCAGCAGCAACA---ACAGAAGCAGCAGCAG--------------------------CAACCGAAG---CAGCAGCAGCAACCG-AAGCAGCAGCAACAAC--AGATGCAGCAGCAACA------------------------------GAAGCAGCAGCA---ACAG-----------------AAGCAG---CAGCAA------------------------CAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGCAGC--AGAAACAACAGAAGC------------AGCAGCAACA------ACAGAA---GCATC------------AGCAG------------CAGCAACA---GAAGCA----------------------------------------------------------------------------------------------------------GSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................CACAGAAGCAGCAG----------------CAGCAACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
...........................................................................................................................................................................................................................................................................................................................AGCAACCG-AAGCAGCAGCAACAAC--AGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC------------AGCAG------------CAGCAACA---GAAGC............................................................................................................2120.5010001000
......................................................................................................................................................................................................................................................................AGCAGCAG--------------------------CAACCGAAG---CA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000100
.....................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACCG-AAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------------CAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGCAGC--AGAA..............................................................................................................................................................................................................1920.5010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAA---GCATC------------AGCAG------------CAGC........................................................................................................................1920.5010000010
..................................................................................................................................................................................................................................................GCAGCAACA---ACAGAAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510000010
......GCAGCAACAACAGAAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510000010
..............................................................................................................................................................................GCA-------------------------------------------GCAACAACAG---AA-GCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................G---CAGCAA------------------------CAACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAGCAGC--..................................................................................................................................................................................................................2040.2510000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------AGCAG------------CAGCAACA---GAAGC............................................................................................................1950.2011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG------------CAGCAACA---GAAGCA----------------------------------------------------------------------------------------------------------.1960.1710000010
............................................................................................................................................................................................................................................................................................................................................................AGCAGCAACA------------------------------GAAGCAGCAGCA---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2260.1710000010
......................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCA---ACAG-----------------AAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.1710000010
.........................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA---ACAG-----------------AAGCAG---CAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2260.1710000010
.........................................................................................................................................................................................................................................................CA---ACAGAAGCAGCAGCAG--------------------------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.1110000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GCATC------------AGCAG------------CAGCAAC.....................................................................................................................18180.1122000000
................................................................................................................................................................................................................................CAACAG---AA-GCAGCAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.1110000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---GCATC------------AGCAG------------CAGCAACA---.................................................................................................................19150.0711000000

Generated: 05/18/2015 at 05:33 AM