ID:

dps_3384

 Coordinate:

XR_group8:8505617-8505783 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.8 -36.7 -36.6

Flybase annnotation

CDS [Dpse\GA17812-cds]; CDS [Dpse\GA17812-cds]; exon [dpse_GLEANR_7673:3]; exon [dpse_GLEANR_7673:2]; intron [Dpse\GA17812-in]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTCCATGTGCTCCGTCACTACGGACTTTTCCACTCAGTCTGTGTGCCCAGGTTAGTAGCAATCCCCAATCACCGATCCGCAATCAGATTCAAGGTTGCGTTTGCATACAATGAACCCCAGAGCTGTTGAAACTTGATTGGGTGGATTCGGTGGATTGTGCTCCCCTTTCGATTGCGACCGATATTTCACCACCTTTTCTCTCTCCCCGCAACGACAGCTACATCGAGCAAGATCGCGTGTGCGGATTCTGGACTTGGCTGTTTGTGC
**************************************************...((((.((((((......((((((((((((((((.(((((((((.((((.......)))))))).........))))).)).))))..))))).)))))))))))))))...((.(((.(((((..............................)))))))).))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
 M062
head
 V112
male body		 GSM444067
head
 M059
embryo
 SRR902012
CNS imaginal disc
...CATGTGCTCCGTCACTACGGACT................................................................................................................................................................................................................................................. 23 0 1 2.00 2 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................GCAAGATCGCGTGTGCGGATTCTG................. 24 0 1 2.00 2 2 0 0 0 0 0 0
..............................................................................................................................................................................................................................................GTGCGGATTCTGGACCTGGC......... 20 1 1 1.00 1 1 0 0 0 0 0 0
...............................ACTCAGTCTGTGTGCCCAG......................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................TCCCCTTTCGATTGCGACCGATATT.................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................GCAAGATCGCGTGTGCGG....................... 18 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................GATCGCGTGTGCGGATTCTG................. 20 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................................GTGTGCGGATTCTGGACCTGGCTG....... 24 1 1 1.00 1 1 0 0 0 0 0 0
..............................CACTCAGTCTGTGTGCCCAGCTA...................................................................................................................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................................TGCGGATGCTGGACTTGGTT........ 20 2 1 1.00 1 0 0 0 1 0 0 0
....................................................................................................................................................................................................................................AAGATCGCGTGTGCGGATTCTGGACCT............ 27 1 1 1.00 1 1 0 0 0 0 0 0
.ATCATGTGCTCCGTCACTACGGACC................................................................................................................................................................................................................................................. 25 3 1 1.00 1 0 0 1 0 0 0 0
.TCCATGTGCTCCGTCACTAC...................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................................GCGTGTGCGGATTCTGGA............... 18 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................CAAGATCGCGTGTGCGGATTCTG................. 23 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................AAGATCGCGTGTGCGGATTCTGG................ 23 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................ATCGCGTGTGCGGATTCTGGACCT............ 24 1 1 1.00 1 0 0 0 0 0 1 0
.................................................................................................................................................................................................................................................CGGATTCCGGACCTGGCTGTT..... 21 2 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................GCAAGATCGCGTGTGCGGATTCTGG................ 25 0 1 1.00 1 1 0 0 0 0 0 0
......GTGCTCCGTCACTACGGACTTTTCC............................................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................CATCGAGCAAGATCGCGTGTGCG........................ 23 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................................ATTCTGGACCTGGCTGTTT.... 19 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................AAGATCGCGTGTGCGGATTCTG................. 22 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................GCAAGATCGCGTGTGCGGATT.................... 21 0 1 1.00 1 0 0 0 1 0 0 0
.........................................................................................................................................................................................................CTCCCCGCAACGACAGCT................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................CATCGAGCAAGATCGCGTGTGCGG....................... 24 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................AAGATCGCGTGTGCGGATT.................... 19 0 1 1.00 1 0 0 0 0 1 0 0
....ATGTGCTCCGTCACTACGGACC................................................................................................................................................................................................................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0
............................................................................................................................................................................................................................................GTGTGCGGATTCTGGACTTGGCT........ 23 0 1 1.00 1 0 0 0 0 0 0 1
..................................................................................................................................................................................................................................GCAAGATCGCGTGTGCGGATTCT.................. 23 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................CTTGATAGGGTGGATTAGGT.................................................................................................................... 20 2 2 0.50 1 0 1 0 0 0 0 0
............................................................................................................................................................................................................................................GAGTGCGGATGCTGGACTTGG.......... 21 2 3 0.33 1 1 0 0 0 0 0 0
.................................................................................................................................AACTTGATAGGGTGGGTT........................................................................................................................ 18 2 4 0.25 1 0 0 0 0 1 0 0
...................................................................................................................................CTTGATAGGGAGGATTAGGT.................................................................................................................... 20 3 5 0.20 1 0 1 0 0 0 0 0
..................................................................................................................................CCTTGATAGGGTTGATTCGGT.................................................................................................................... 21 3 6 0.17 1 0 1 0 0 0 0 0
...................................................................................................................................CTTGATTGGCTGGATTAGGC.................................................................................................................... 20 3 9 0.11 1 0 1 0 0 0 0 0
....................................................................................................................................TTGATAGGGTGGCTTAGGT.................................................................................................................... 19 3 11 0.09 1 0 1 0 0 0 0 0
.........................GTTTCCAATCAGTCTGGGT............................................................................................................................................................................................................................... 19 3 13 0.08 1 0 1 0 0 0 0 0
............................................................................................................................................TTGGATGGGGTGGATTGTGC........................................................................................................... 20 3 17 0.06 1 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................................ATGCGGTTACTGGACTTGG.......... 19 3 20 0.05 1 1 0 0 0 0 0 0

Anti-sense strand reads

GAGGTACACGAGGCAGTGATGCCTGAAAAGGTGAGTCAGACACACGGGTCCAATCATCGTTAGGGGTTAGTGGCTAGGCGTTAGTCTAAGTTCCAACGCAAACGTATGTTACTTGGGGTCTCGACAACTTTGAACTAACCCACCTAAGCCACCTAACACGAGGGGAAAGCTAACGCTGGCTATAAAGTGGTGGAAAAGAGAGAGGGGCGTTGCTGTCGATGTAGCTCGTTCTAGCGCACACGCCTAAGACCTGAACCGACAAACACG
**************************************************...((((.((((((......((((((((((((((((.(((((((((.((((.......)))))))).........))))).)).))))..))))).)))))))))))))))...((.(((.(((((..............................)))))))).))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 GSM343916
embryo
 M059
embryo
 M022
male body
..................................................................................................................................................AGCCAGCTAACACGTGGAGAA.................................................................................................... 21 3 1 3.00 3 3 0 0 0 0
....................................................................................................................................................CCAGCTAACACGTGGAGAA.................................................................................................... 19 3 20 2.75 55 49 3 3 0 0
........................GAAAAGGTGAGTCGTACATA............................................................................................................................................................................................................................... 20 3 14 2.14 30 20 9 0 0 1
......................................................................................................................................................................................................................................CTAGCGCACACGCCTAAGACC................ 21 0 1 2.00 2 2 0 0 0 0
..................................................................................................................................................AGCCAGCTAACACGAGGAGAAC................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
...................................................................................................................................................GCCAGCTAACACGTGGAGAA.................................................................................................... 20 3 13 1.00 13 9 4 0 0 0
........................GAAAAGGTGAGTCGTACACA............................................................................................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0
..................ATGCCGGAAAAGATGAGTGAG.................................................................................................................................................................................................................................... 21 3 1 1.00 1 0 0 1 0 0
..................................................................................................................................................AGCCAGCTAACACGTGGAGA..................................................................................................... 20 3 3 1.00 3 3 0 0 0 0
........................GAAAAGGTGAGTCGTACA................................................................................................................................................................................................................................. 18 2 9 0.56 5 5 0 0 0 0
...................................................................................................................................................GCCAGCTAACACGTGGAGA..................................................................................................... 19 3 20 0.35 7 6 1 0 0 0
.........................................................................................................................................................................................AGTGGTGGAAATGAGGGAG............................................................... 19 2 3 0.33 1 0 1 0 0 0
....................................................................................................................................................CCACCTAACACGTGGAGAAC................................................................................................... 20 3 5 0.20 1 1 0 0 0 0
......CACGAAGCAGTGATGGATG.................................................................................................................................................................................................................................................. 19 3 7 0.14 1 0 0 0 1 0
..........................................................GTTAGGGGTTTCTGGCTAGGG............................................................................................................................................................................................ 21 3 9 0.11 1 0 0 1 0 0
.......ACGAGGCCGTAATGCCAGA................................................................................................................................................................................................................................................. 19 3 15 0.07 1 1 0 0 0 0
.................................................................................................................................................................................................AAAAAAGGGAGGGGCGTT........................................................ 18 2 19 0.05 1 1 0 0 0 0
.AAGTACACCAGGCAGCGAT....................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XR_group8:8505567-8505833 - dps_3384 CTCCATGTGCTCCGTCACTACGGACTTTTCCACTCAGTCTGTGTGCCCAGGTTAGTAG--CAA-TCCCC----------------------AATCACCGA------TCCG-CAATCAGATTCAAGGTTGCGTTTGCATACAATGAACCCCAGAGCTGTTGAA--AC----------------------------------------------------------------------------------TTGATTGGGTGGATTCGGTGGATTG----T-GCT-----------------CCC----C--------------------T---------------------TTCGATTGC-GACCGA-TAT--T-----------TCACC-ACCTTTTCTCTCTCCCCGC-----------A-----ACG-ACAGCTACATCGAGCAAGATCGCGTGTGCGGATTCTGGACTTGGCTGTTTGTGC
droPer2 scaffold_40:713763-714029 - CTCCATGTGCTCCGTCACTACGGACTTTTCCACTCAGTCTGTGTGCCCAGGTTAGTAG--CAA-TCCCC----------------------AATCACCGA------TCCG-CAATCAGATTCAAGGTTGCTTTTGCATACAATGAACCCAAGAGCTGTTGAA--AC----------------------------------------------------------------------------------TTGATTGGGTGGATTCGGTGGATTG----T-GCT-----------------CCC----C--------------------T---------------------TTCGATT-CCGACCGA-TAT--T-----------TCACC-ACCTTTTCTCTCTCCCCGC-----------A-----ACG-ACAGCTACATCGAGCAAGATCGCGTGTGCGGATTCTGGACCTGGCTGTTTGTGC
droWil2 scf2_1100000004762:4918718-4918963 - dwi_2046 ATACACGTGCTGCGTCATTATGGACTTTTCCACTCCGTGTGTGTGCCCAGGTGAGTGTG-TGTG----------TGTGAAGAG--------G------------AATTGTT-TAT------CAAGGTTGT----------------------------T-----------------------------------------------------------------------------------AAAAC-CTGA---------------AACTTT----T-GCTCT-GA-----------------GATATGCAATTTTTAAATATATAT---------------------TTCGATCACTGACCGGATAA--TAAT--------CC-CTCTCTCTTTCTCTCTCTCTGT-----------C-----TCT-TTAGCTATATTGAACAAGATCGCGTGTGCGGTTTCTGGACCTGGCTGTTTGTGT
droVir3 scaffold_13049:3736136-3736343 - TTGCACGTGCTGCGTCATTACGGGCTATTCCATTCGGTCTGTGTGCCCAGGTGAGATT--GGA-AT----------------A-------------------------TTT--------------------------------------------------------------------------------------------------TCGCAAGGTCAAAGCGGCAGTGCCAATAATAATAAAAC-CTGA-----------------T-TT----T-GC-------------------------------------------------------------------------------------------------------A-CA-AT---CTCTCCCTCCACGCTCTGTCTCAACCGACCGCCT-GTAGCTACATTGAACAAGATCGCGTGTGCGGCTTCTGGACCTGGCTCTTTGTGC
droMoj3 scaffold_6654:323029-323221 + TTGCACGTCCTACGGCATTATGGACTATTCCATTCGGTCTGTGTGCCCAGGTAAAGTACTTCA-AT----------------ACT-C---------------------TTT--------------------------------------------------------------------------------------------------TTGCAAGCTCA--GCAGC------------------------------------------------------------------------------------------------------------------------------------------ATCA--TCAT--------AT-CTCTCTCTCTCTCCCTTTT-GCTCTCTTTCTACCACTCTGAT-GCAGTTACATTGAGCAAGACCGTGTGTGCGGCTTCTGGACCTGGTTATTTGTGC
droGri2 scaffold_15110:10945593-10945794 + CTGCACGTGCTGCGTCACTACGGACTTTTCCACTCCGTCTGTGTACCCAGGTGAGTTGGTTGA-GT----------------TTT-TGTTGTTA---------------------------T----------------------------------------GGCATTG-AAAT--TTTG----CCAGTTCATTGAC---AG------CCAGCAAGGTTTA------------------A-----------------------------T-----T----------A---AAACCTGATTT-----------------------------------------------------------------------------------------------C---TTCTTCGC-----------G-----ATT-GCAGTTACATTGAACAAGATCGAGTGTGCGGCTTCTGGACCTGGCTCTTTGTGC
droAna3 scaffold_13337:13950538-13950704 + CTCCACGTCCTACGTCACTACGGACTCTTCCACTCCGTCTGTGTGCCGAGGTTGGTGT--CAA-A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAC-AA---AAACTTGATTT-------------------------------------------------CCGATCACTGACCGA-TAT--T-----------AA-TA-TT-----C------T------------------CTCCTG-ACAGCTACATCGAACAAGATCGCGTGTGTGGCTTCTGGACCTGGCTCTTTGTAC
droBip1 scf7180000395832:890490-890697 + CTGCACGTGCTACGTCACTACGGACTCTTTCACTCCGTTTGTGTGCCCAGGTTGGTGT--TAA-AC----------------CCAG---------------------------ACCCGGCTCAAGGTCAC-----------------------------------------------------------------------------------TAAAC------------------------------CTGA-----------------CCGA----T-GGGCT-GAGACAAACTTGATTT-------------------------------------------------CCGATCACTGACCGA-TAT--TAATCT------CC-GA--T-----C------T--------------------CCCC-TCAGCTACATCGAACAAGATCGCGTTTGCGGCTTCTGGACCTGGCTCTTTGTGC
droKik1 scf7180000302577:1012369-1012593 - ATTCACGTGCTGCGTCACTACGGACTCTTTCACTCTGTCTGCGTGCCCAGGTTGGTAT--TGTG----------TGTGCATCC--------C------------AATCGG-ACACCCAGTTC----------------------------------------AGCCTT-----------------------------------------------GAA-----------------------------C----TTG------------------------------GG---TAACTGGATTGC----GA-----------------------TGCAAATGTAAGGCTCTGAGCGTTCATTGACCGA-TCC--T-----CTGATTCC-CA-AA----------------------------------TCC-ACAGCTACATCGAGCAAGATCGCGTATGCGGCTTCTGGACCTGGCTTTTTGTAC
droFic1 scf7180000453839:2031463-2031711 - ATTCACGTGCTGCGTCACTACGGACTTTTCCACTCCGTCTGCGTGCCCAGGTTGGTAT--TTG-CC----T---TC---------------------------------------------CA-GCCTTT----------------------------C---AGCCTTTTTAAT--ATCAAGTT------CAGCGGCGCCTG------CACGCTTGAC-----------------------------C----TTG--------------A-TATG---GGGGCT-GA---AAACTCGATTCC----TA-----------------------TGCAAATG----------TGCGTTCACTGACCGA-TAT--T-----------CA-AC-ACATATTC------C------------------TCTCCC-ACAGCTACATCGAGCAAGATCGCGTGTGCGGCTTCTGGACCTGGCTCTTCGTGC
droEle1 scf7180000491255:3072461-3072707 - ATTCACGTGCTGCGTCACTACGGACTCTTCCACTCCGTCTGCGTGCCCAGGTTGGTTT--C------------------ATCT--------CAT-------CA--------ACAGCCGATTT----------------------------------------AGCCTGA-TATT--GTTAAGTT------CAGCGCC---TG------CATTTGCGAC-----------------------------C----TTG--------------A-TATGTATAAGGCT-GG---AAACTTGAATGC----TA-----------------------TTCAAATG----------TCCGATCACTGACCGA-TAT--T-----------CC-GA-AC-----C------T------------------TCTCCC-ACAGCTACATCGAGCAAGATCGCGTGTGCGGCTTCTGGACCTGGCTCTTCGTGC
droRho1 scf7180000779409:24243-24496 + ATTCATGTGCTGCGTCACTACGGACTCTTCCACTCCGTCTGCGTGCCCAGGTTGGTTT--CGC-T-----C---TCT--AACT--------GAA-------CA--------AGATCCGATTC----------------------------------------AGCCTTA-TATT--GTCAAGTT------CATCGCC---TG------CATTCGTGAA-----------------------------C----TTG--------------A-TATGTATAAGGCT-GG---AAACTTGAATGC----TA-----------------------TGCAAATG----------TCCGATCACTGACCGA-TAT--T-----------CC-GA-AC-----A------T------------------TCTCCC-ACAGCTACATCGAGCAAGATCGCGTGTGCGGATTCTGGACCTGGCTCTTCGTGC
droBia1 scf7180000302428:3472833-3473104 + ATTCACGTGCTCCGCCACTACGGACTCTTCCACTCCGTCTGCGTGCCCAGGTTGGTAT--TCTG-C---CC---TCCGAAC--------------ACCCATCGAAATCCG-CAATCCGCTTC----------------------------------------AGCCTT----TC--GTCAAGTT------CATCGCC---TC------CCAGCGAGAC-----------------------------C----TTG--------------G-----TGCAAGGCTGGG---GAACTCGATTGC----CA-----------TATGCGTATGTATGCAAATG----------ACCGATCACTGACCCA-TAT--T-----------CC-GA-AC-----C------T------------------TCTCCC-ACAGCTACATCGAGCAAGATCGCGTATGCGGCTTCTGGACCTGGCTCTTCGTGC
droTak1 scf7180000415352:732574-732811 + ATTCACGTGCTGCGTCACTACGGACTCTTCCACTCCGTCTGCGTGCCCAGGTTGGTAT--TCTG-A-----TCGTCTGGATCC--------CCT-------CG--------AAATCTGCTTC----------------------------------------AGCCAG----------------------------------TCA--------GTGAC-----------------------------C----TTG--------------A-G----ATGAGGCT-GG---GAACTCGATTCCAGCATA-----------------------TGCAAATG----------ACCGATCACTGACCGA-TATATT-----------CC-GA-AT-----C------T------------------TCTCCCTTCAGCTACATCGAGCAAGATCGCGTGTGCGGCTTCTGGACCTGGCTCTTCGTGC
droEug1 scf7180000409711:698195-698444 + ATTCACGTGCTGCGTCATTACGGACTCTTCCACTCCGTCTGCGTGCCCAGGTTGGTAT--TC-----GCTGTCGTC--GATCT--------CAT---------------------------A----------------------------------------AGCCTTA-TATCAGGTCAGGTT------CAGCGCC---TGTAGGTGCATGCACGAC-----------------------------C----TTG--------------T-----TATAAGGCT-GA---AAACTTGATTAC----TA-----------------------TGCAAATG----------TCCGATCACTGACCGA-TAT--T-----------CC-CA-AC-----C------T------------------TATCCC-ACAGCTACATCGAGCAAGATCGCGTGTGCGGCTTCTGGACCTGGCTCTTCGTGC
dm3 chr3L:16644306-16644547 - ATTCACGTGCTGCGTCACTACGGACTCTTCCACTCCGTCTGCGTGCCCAGGTTGGTAT--TGA-AC----------------TCCC-----CAT---------------------------C----------------------------------------GGCCTTG-CATC--GACAGGTTC-----CAGTGCC---TGTCTG--TCCGCATGACCTG------------------C-----------------------------T-----TGTGCGGCT-GG---AAACTTGATTGC--CATA-----------------------TGCAAATC----------AACGATCACTGACCGA-TAT--T-----------CC-CA-AC-----C------T------------------TCTCCC-ACAGCTACATCGAGCAAGATCGCGTGTGCGGCTTCTGGACCTGGCTCTTCGTGC
droSim2 3l:16239707-16239947 - dsi_7600 ATTCACGTGCTGCGTCACTACGGACTCTTCCACTCCGTCTGCGTGCCCAGGTTGGTAT--TGA-AC----------------TCCG-----CAT---------------------------C----------------------------------------GGCCTTG-CAGC--GACAGGTT------CAGCGCC---TGCCTG--TTCGCATGGCCTG------------------C-----------------------------T-----TGTGCGGCT-GG---AAACTTGATTGC--CATA-----------------------TGCAAATC----------AGCGATCACTGACCGA-TAT--T-----------CC-CA-AC-----C------T------------------TCTCCC-ACAGCTACATCGAGCAAGATCGCGTGTGCGGCTTCTGGACCTGGCTCTTCGTGC
droSec2 scaffold_0:8722109-8722349 - ATTCACGTGCTGCGTCACTACGGACTCTTCCACTCCGTCTGCGTGCCCAGGTTGGTAT--TGA-AC----------------TCCG-----CAT---------------------------C----------------------------------------GGCCTTG-CATC--GACAGGTT------CATCGCC---TGCCTG--TTCGCATGGCCTG------------------C-----------------------------T-----TGTGCGGCT-GG---AAACTTGATTGC--CATA-----------------------TGCAAATC----------AGCGATCACTGACCGA-TAT--T-----------CC-CA-AC-----C------T------------------TCTCCC-ACAGCTACATCGAGCAAGATCGCGTGTGCGGCTTCTGGACCTGGCTCTTCGTGC
droYak3 3L:17426215-17426454 + ATTCACGTGCTGCGTCACTACGGACTCTTCCACTCCGTCTGCGTGCCCAGGTTGGTAT--TGA-AC----------------CCCT--TCCCATCA-------------------------C----------------------------------------AGCCTTT-CATC--GTCGGGTT------CAGCGCC---TG------CCCGCATGACCTG------------------C-----------------------------T-----TTTGAGGCT-GG---AAACTTGATCCC----CA-----------------------TGCAAATC----------ACCGATCACTGACCGA-TAT--T-----------CC-CA-AC-----C------T------------------TCTCCC-ACAGCTACATCGAGCAAGATCGCGTGTGCGGCTTCTGGACCTGGCTCTTCGTGC
droEre2 scaffold_4784:17183830-17184071 + ATTCACGTGCTGCGTCACTACGGACTCTTCCACTCCGTCTGCGTGCCCAGGTTGGTAT--TGA-GC----------------TCCGCGTCGCAT---------------------------C----------------------------------------AGCCTTG-CATC--GTCGGGTT------CAGCGAC---GATC-A--CACGCGTGATCTG------------------A-----------------------------T-----CATGAGGCT-GG---AAACTTGATCCC----CA-----------------------TGCAAATC----------ACCGATCACTGACCGA-TAT--T-----------CC--A-AC-----C------T------------------TCTCCC-ACAGCTACATCGAACAAGATCGCGTGTGCGGCTTCTGGACCTGGCTCTTCGTGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CTCCATGTGCTCCGTCACTACGGACTTTTCCACTCAGTCTGTGTGCCCAGGTTAGTAG--CAA-TCCCC----------------------AATCACCGA------TCCG-CAATCAGATTCAAGGTTGCGTTTGCATACAATGAACCCCAGAGCTGTTGAA--AC----------------------------------------------------------------------------------TTGATTGGGTGGATTCGGTGGATTG----T-GCT-----------------CCC----C--------------------T---------------------TTCGATTGC-GACCGA-TAT--T-----------TCACC-ACCTTTTCTCTCTCCCCGC-----------A-----ACG-ACAGCTACATCGAGCAAGATCGCGTGTGCGGATTCTGGACTTGGCTGTTTGTGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...CATGTGCTCCGTCACTACGGACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020100100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGATCGCGTGTGCGGATTCTG.................2412.0020200000000
...............................ACTCAGTCTGTGTGCCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.........................................................................................................................................................................................................................................................................................T-----------------CCC----C--------------------T---------------------TTCGATTGC-GACCGA-TAT--T-----------....................................................................................................2511.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGATCGCGTGTGCGG.......................1811.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGCGTGTGCGGATTCTG.................2011.0010100000000
.TCCATGTGCTCCGTCACTAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGTGCGGATTCTGGA...............1811.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGATCGCGTGTGCGGATTCTG.................2311.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATCGCGTGTGCGGATTCTGG................2311.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGATCGCGTGTGCGGATTCTGG................2511.0010100000000
......GTGCTCCGTCACTACGGACTTTTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGAGCAAGATCGCGTGTGCG........................2311.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATCGCGTGTGCGGATTCTG.................2211.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGATCGCGTGTGCGGATT....................2111.0010000001000
................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCCGC-----------A-----ACG-ACAGCT................................................1811.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGAGCAAGATCGCGTGTGCGG.......................2411.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATCGCGTGTGCGGATT....................1911.0010000010000
....ATGTGCTCCGTCACTACGGACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGCGGATTCTGGACTTGGCT........2311.0010000000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGATCGCGTGTGCGGATTCT..................2311.0010100000000
droPer2
CTCCATGTGCTCCGTCACTACGGACTTTTCCACTCAGTCTGTGTGCCCAGGTTAGTAG--CAA-TCCCC----------------------AATCACCGA------TCCG-CAATCAGATTCAAGGTTGCTTTTGCATACAATGAACCCAAGAGCTGTTGAA--AC----------------------------------------------------------------------------------TTGATTGGGTGGATTCGGTGGATTG----T-GCT-----------------CCC----C--------------------T---------------------TTCGATT-CCGACCGA-TAT--T-----------TCACC-ACCTTTTCTCTCTCCCCGC-----------A-----ACG-ACAGCTACATCGAGCAAGATCGCGTGTGCGGATTCTGGACCTGGCTGTTTGTGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................ACTACGGACTTTTCCACTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003300000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGATCGCGTGTGCGGATTCTG.................2413.003110001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAAGATCGCGTGTGCGG.......................2012.002000002
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGATCGCGTGTGCGGATTCT..................2312.002200000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGCGGATTCTGGACCTGGCTGTT.....2612.002000002
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGATTCTGGACCTGGCT........1911.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCGTGTGCGGATTCTG.................1911.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGATCGCGTGTGCGGAT.....................2011.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCGTGTGCGGATTCTGGACCT............2411.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTCTGGACCTGGCTGTTTGT..2311.001010000
....ATGTGCTCCGTCACTACGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
....ATGTGCTCCGTCACTACGGACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCAAGATCGCGTGTGCGGATTCTG.................2711.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGCGGATTCTGGACCTGGCT........2311.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATCGCGTGTGCGGATTCTG.................2211.001000001
.TCCATGTGCTCCGTCACTACGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGTGTGCGGATTCTGGA...............1911.001001000
droWil2
ATACACGTGCTGCGTCATTATGGACTTTTCCACTCCGTGTGTGTGCCCAGGTGAGTGTG-TGTG----------TGTGAAGAG--------G------------AATTGTT-TAT------CAAGGTTGT----------------------------T-----------------------------------------------------------------------------------AAAAC-CTGA---------------AACTTT----T-GCTCT-GA-----------------GATATGCAATTTTTAAATATATAT---------------------TTCGATCACTGACCGGATAA--TAAT--------CC-CTCTCTCTTTCTCTCTCTCTGT-----------C-----TCT-TTAGCTATATTGAACAAGATCGCGTGTGCGGTTTCTGGACCTGGCTGTTTGTGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAAGATCGCGTGTGCGGT......................2114.00400400
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGTTTCTGGACCTGGCT........1912.00220000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGTGTGCGGTTTCTGGACCT............2212.00220000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTGAACAAGATCGCGTGTGCGGT......................2712.00201100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGTGTGCGGTTTCTGGACC.............2112.00220000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAAGATCGCGTGTGCG........................1911.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGTGCGGTTTCTGGACCTG...........2211.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATCGCGTGTGCGGTTTCTGGACCT............2711.00110000
.............GTCATTATGGACTTTTCCACTCCGTGTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGTGCGGTTTCTGGACCTGGCT........2511.00100100
.............GTCATTATGGACTTTTCCACTCCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
.....CGTGCTGCGTCATTATGGACTTTTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
ATACACGTGCTGCGTCATTATGGACTTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGCGGTTTCTGGACCTGGCT........2411.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGACCTGGCTGTTTGT..1811.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTGAACAAGATCGCGTGT...........................2211.00100100
.............................................................GTG----------TGTGAAGAG--------G------------AATTGTT-...................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.......................ACTTTTCCACTCCGTGTGTGTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001
......................GACTTTTCCACTCCGTGTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.TACACGTGCTGCGTCATTATGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGGACCTGGCTGTTTGT..2011.00100100
ATACACGTGCTGCGTCATTATGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACAAGATCGCGTGTGC.........................1911.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCTGGACCTGGCTGTTT....2011.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGCGGTTTCTGGACCT............2011.00100100
......................................GTGTGTGCCCAGGTGAGTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGGACCTGGCTGTT.....1811.00100010
..ACACGTGCTGCGTCATTATGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAACAAGATCGCGTGTGCGGT......................2411.00100100
................................CTCCGTGTGTGTGCCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGTGTGCGGTTTCTGGACCTGGCT........2711.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGCGGTTTCTGGAC..............1811.00101000
droVir3
TTGCACGTGCTGCGTCATTACGGGCTATTCCATTCGGTCTGTGTGCCCAGGTGAGATT--GGA-AT----------------A-------------------------TTT--------------------------------------------------------------------------------------------------TCGCAAGGTCAAAGCGGCAGTGCCAATAATAATAAAAC-CTGA-----------------T-TT----T-GC-------------------------------------------------------------------------------------------------------A-CA-AT---CTCTCCCTCCACGCTCTGTCTCAACCGACCGCCT-GTAGCTACATTGAACAAGATCGCGTGTGCGGCTTCTGGACCTGGCTCTTTGTGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAAGATCGCGTGTGC.........................1812.002001000000000010000000000000000000000000000000000000000000000000
............................TCCATTCGGTCTGTGTGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
................ATTACGGGCTATTCCATTCGGTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
.TGCACGTGCTGCGTCATTACGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
........GCTGCGTCATTACGGGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCAACCGACCGCCT-GTAG..................................................2111.001000000000000000010000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACATTGAACAAGATCGCGTGTG..........................2611.001000100000000000000000000000000000000000000000000000000000000000
..........................ATTCCATTCGGTCTGTGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGTCTCAACCGACCGCCT-GTAG..................................................2611.001000000000000000000000001000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGATCGCGTGTGCGGCTTCT..................2411.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACATTGAACAAGATCGCGTGTGC.........................2611.001000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACATTGAACAAGATCGCGT.............................2311.001000000000000000000000000000000000100000000000000000000000000000
................................TTCGGTCTGTGTGCCCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
................ATTACGGGCTATTCCATTCGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000010000000000000000000000000000000000000000000000000
........GCTGCGTCATTACGGGCTATTCCATTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000010000000000000000000000000
...........................TTCCATTCGGTCTGTGTGCCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
.....................GGGCTATTCCATTCGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..........TGCGTCATTACGGGCTATTCCATTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGATCGCGTGTGCGGCTTCTGGAC..............2711.001000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACATTGAACAAGATCGCGTGT...........................2411.001000000000000000000000000000000001000000000000000000000000000000
................ATTACGGGCTATTCCATT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000001000000000000000000000000000000
...............CATTACGGGCTATTCCATTCGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTTCTGGACCTGGCTCTT.....2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACATTGAACAAGATCGCGT.............................2111.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAACAAGATCGCGTGTGCGGCTT....................2611.001000000000000000000010000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CCCTCCACGCTCTGTCTTT..................................................................1920.501001000000000000000000000000000000000000000000000000000000000000
droMoj3
TTGCACGTCCTACGGCATTATGGACTATTCCATTCGGTCTGTGTGCCCAGGTAAAGTACTTCA-AT----------------ACT-C---------------------TTT--------------------------------------------------------------------------------------------------TTGCAAGCTCA--GCAGC------------------------------------------------------------------------------------------------------------------------------------------ATCA--TCAT--------AT-CTCTCTCTCTCTCCCTTTT-GCTCTCTTTCTACCACTCTGAT-GCAGTTACATTGAGCAAGACCGTGTGTGCGGCTTCTGGACCTGGTTATTTGTGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................ACTATTCCATTCGGTCTGTGTGCCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACATTGAGCAAGACCGTGTGT...........................2411.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACATTGAGCAAGACCGTGTGTGC.........................2611.001000001
......................GACTATTCCATTCGGTCTGTGTGCCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCTTTCTACCACTCTGAT-GCA...................................................2411.001100000
......................GACTATTCCATTCGGTCTGTGTGCCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
droGri2
CTGCACGTGCTGCGTCACTACGGACTTTTCCACTCCGTCTGTGTACCCAGGTGAGTTGGTTGA-GT----------------TTT-TGTTGTTA---------------------------T----------------------------------------GGCATTG-AAAT--TTTG----CCAGTTCATTGAC---AG------CCAGCAAGGTTTA------------------A-----------------------------T-----T----------A---AAACCTGATTT-----------------------------------------------------------------------------------------------C---TTCTTCGC-----------G-----ATT-GCAGTTACATTGAACAAGATCGAGTGTGCGGCTTCTGGACCTGGCTCTTTGTGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGATCGAGTGTGCGGC......................2011.00101
droAna3
CTCCACGTCCTACGTCACTACGGACTCTTCCACTCCGTCTGTGTGCCGAGGTTGGTGT--CAA-A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAC-AA---AAACTTGATTT-------------------------------------------------CCGATCACTGACCGA-TAT--T-----------AA-TA-TT-----C------T------------------CTCCTG-ACAGCTACATCGAACAAGATCGCGTGTGTGGCTTCTGGACCTGGCTCTTTGTACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATCGCGTGTGTGGCTTCTG.................2211.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGAACAAGATCGCGTGTGTGGC......................2511.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGAACAAGATCGCGTGTGC.........................2211.001010000
..........TACGTCACTACGGACTCTTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
......GTCCTACGTCACTACGGACTCTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGTGTGTGGCTTCTGGACC.............2211.001100000
droBip1
CTGCACGTGCTACGTCACTACGGACTCTTTCACTCCGTTTGTGTGCCCAGGTTGGTGT--TAA-AC----------------CCAG---------------------------ACCCGGCTCAAGGTCAC-----------------------------------------------------------------------------------TAAAC------------------------------CTGA-----------------CCGA----T-GGGCT-GAGACAAACTTGATTT-------------------------------------------------CCGATCACTGACCGA-TAT--TAATCT------CC-GA--T-----C------T--------------------CCCC-TCAGCTACATCGAACAAGATCGCGTTTGCGGCTTCTGGACCTGGCTCTTTGTGCSizeHit CountTotal NormTotal
No Reads
droKik1
ATTCACGTGCTGCGTCACTACGGACTCTTTCACTCTGTCTGCGTGCCCAGGTTGGTAT--TGTG----------TGTGCATCC--------C------------AATCGG-ACACCCAGTTC----------------------------------------AGCCTT-----------------------------------------------GAA-----------------------------C----TTG------------------------------GG---TAACTGGATTGC----GA-----------------------TGCAAATGTAAGGCTCTGAGCGTTCATTGACCGA-TCC--T-----CTGATTCC-CA-AA----------------------------------TCC-ACAGCTACATCGAGCAAGATCGCGTATGCGGCTTCTGGACCTGGCTTTTTGTACSizeHit CountTotal NormTotal
No Reads
droFic1
ATTCACGTGCTGCGTCACTACGGACTTTTCCACTCCGTCTGCGTGCCCAGGTTGGTAT--TTG-CC----T---TC---------------------------------------------CA-GCCTTT----------------------------C---AGCCTTTTTAAT--ATCAAGTT------CAGCGGCGCCTG------CACGCTTGAC-----------------------------C----TTG--------------A-TATG---GGGGCT-GA---AAACTCGATTCC----TA-----------------------TGCAAATG----------TGCGTTCACTGACCGA-TAT--T-----------CA-AC-ACATATTC------C------------------TCTCCC-ACAGCTACATCGAGCAAGATCGCGTGTGCGGCTTCTGGACCTGGCTCTTCGTGCSizeHit CountTotal NormTotal
No Reads
droEle1
ATTCACGTGCTGCGTCACTACGGACTCTTCCACTCCGTCTGCGTGCCCAGGTTGGTTT--C------------------ATCT--------CAT-------CA--------ACAGCCGATTT----------------------------------------AGCCTGA-TATT--GTTAAGTT------CAGCGCC---TG------CATTTGCGAC-----------------------------C----TTG--------------A-TATGTATAAGGCT-GG---AAACTTGAATGC----TA-----------------------TTCAAATG----------TCCGATCACTGACCGA-TAT--T-----------CC-GA-AC-----C------T------------------TCTCCC-ACAGCTACATCGAGCAAGATCGCGTGTGCGGCTTCTGGACCTGGCTCTTCGTGCSizeHit CountTotal NormTotal
No Reads
droRho1
ATTCATGTGCTGCGTCACTACGGACTCTTCCACTCCGTCTGCGTGCCCAGGTTGGTTT--CGC-T-----C---TCT--AACT--------GAA-------CA--------AGATCCGATTC----------------------------------------AGCCTTA-TATT--GTCAAGTT------CATCGCC---TG------CATTCGTGAA-----------------------------C----TTG--------------A-TATGTATAAGGCT-GG---AAACTTGAATGC----TA-----------------------TGCAAATG----------TCCGATCACTGACCGA-TAT--T-----------CC-GA-AC-----A------T------------------TCTCCC-ACAGCTACATCGAGCAAGATCGCGTGTGCGGATTCTGGACCTGGCTCTTCGTGCSizeHit CountTotal NormTotal
No Reads
droBia1
ATTCACGTGCTCCGCCACTACGGACTCTTCCACTCCGTCTGCGTGCCCAGGTTGGTAT--TCTG-C---CC---TCCGAAC--------------ACCCATCGAAATCCG-CAATCCGCTTC----------------------------------------AGCCTT----TC--GTCAAGTT------CATCGCC---TC------CCAGCGAGAC-----------------------------C----TTG--------------G-----TGCAAGGCTGGG---GAACTCGATTGC----CA-----------TATGCGTATGTATGCAAATG----------ACCGATCACTGACCCA-TAT--T-----------CC-GA-AC-----C------T------------------TCTCCC-ACAGCTACATCGAGCAAGATCGCGTATGCGGCTTCTGGACCTGGCTCTTCGTGCSizeHit CountTotal NormTotal
No Reads
droTak1
ATTCACGTGCTGCGTCACTACGGACTCTTCCACTCCGTCTGCGTGCCCAGGTTGGTAT--TCTG-A-----TCGTCTGGATCC--------CCT-------CG--------AAATCTGCTTC----------------------------------------AGCCAG----------------------------------TCA--------GTGAC-----------------------------C----TTG--------------A-G----ATGAGGCT-GG---GAACTCGATTCCAGCATA-----------------------TGCAAATG----------ACCGATCACTGACCGA-TATATT-----------CC-GA-AT-----C------T------------------TCTCCCTTCAGCTACATCGAGCAAGATCGCGTGTGCGGCTTCTGGACCTGGCTCTTCGTGCSizeHit CountTotal NormTotal
No Reads
droEug1
ATTCACGTGCTGCGTCATTACGGACTCTTCCACTCCGTCTGCGTGCCCAGGTTGGTAT--TC-----GCTGTCGTC--GATCT--------CAT---------------------------A----------------------------------------AGCCTTA-TATCAGGTCAGGTT------CAGCGCC---TGTAGGTGCATGCACGAC-----------------------------C----TTG--------------T-----TATAAGGCT-GA---AAACTTGATTAC----TA-----------------------TGCAAATG----------TCCGATCACTGACCGA-TAT--T-----------CC-CA-AC-----C------T------------------TATCCC-ACAGCTACATCGAGCAAGATCGCGTGTGCGGCTTCTGGACCTGGCTCTTCGTGCSizeHit CountTotal NormTotal
No Reads
dm3
ATTCACGTGCTGCGTCACTACGGACTCTTCCACTCCGTCTGCGTGCCCAGGTTGGTAT--TGA-AC----------------TCCC-----CAT---------------------------C----------------------------------------GGCCTTG-CATC--GACAGGTTC-----CAGTGCC---TGTCTG--TCCGCATGACCTG------------------C-----------------------------T-----TGTGCGGCT-GG---AAACTTGATTGC--CATA-----------------------TGCAAATC----------AACGATCACTGACCGA-TAT--T-----------CC-CA-AC-----C------T------------------TCTCCC-ACAGCTACATCGAGCAAGATCGCGTGTGCGGCTTCTGGACCTGGCTCTTCGTGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TACATCGAGCAAGATCGCGTGTGCGGC......................2718.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000001000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGCAAGATCGCGTGTGCGGCT.....................2417.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTACATCGAGCAAGATCGCGTG............................2515.0050000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGCAAGATCGCGTGTGCGGCTTC...................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....ACGTGCTGCGTCACTACGGACTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GGACTCTTCCACTCCGTCTGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ACGTGCTGCGTCACTACGGACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGCAAGATCGCGTGTGCGGCTTCT..................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTGGACCTGGCTCTT.....1812.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CGTGCTGCGTCACTACGGACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000
...........................TTCCACTCCGTCTGCGTGCCCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAGATCGCGTGTGCGGC......................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGATCGCGTGTGCGGCTTC...................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACATCGAGCAAGATCGC...............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TCACGTGCTGCGTCACTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TGCTGCGTCACTACGGACTCTTCCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGAGCAAGATCGCGTGTGCGGCT.....................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAAGATCGCGTGTGCGGC......................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
...........................TTCCACTCCGTCTGCGTGCCCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........TGCGTCACTACGGACTCTTCCACTCCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGCTTCTGGACCTGGCTCTTC....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTCACGTGCTGCGTCACTACGGACTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TCACGTGCTGCGTCACTACGGACTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........TGCGTCACTACGGACTCTTCCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.TTCACGTGCTGCGTCACTACGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGTGTGCGGCTTCTGGACCTGGCT........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCGCGTGTGCGGCTTCTGGACCTT...........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TGACCGA-TAT--T-----------CC-CA-AC-----C------T------------------TCTCC........................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GACTCTTCCACTCCGTCTGCGTGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................CGGACTCTTCCACTCCGTCTGCGTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGCGGCTTCTGGACCTGGCT........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGAGCAAGATCGCGTGTGCGGC......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGCAAGATCGCGTGTGC.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCGAGCAAGATCGCGTGTGCGG.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCGGCTTCTGGACCTGGCTCTT.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACATCGAGCAAGATC.................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAGATCGCGTGTGCGGCTTCTGGA...............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGTGTGCGGCTTCTGGACCT............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TGACCGA-TAT--T-----------CC-CA-AC-----C------T------------------TCT..........................................................2211.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GACTCTTCCACTCCGTCTGCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CTTCCACTCCGTCTGCGTGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..........TGCGTCACTACGGACTCTTCCACTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CGA-TAT--T-----------CC-CA-AC-----C------T------------------TCTCC........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACATCGAGCAAGATCGCGTGTGCGGCT.....................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCAAGATCGCGTGTGCGG.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
ATTCACGTGCTGCGTCACTACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACATCGAGCAAGATCGCGT.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACATCGAGCAAGATCGCGTG............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TGCTGCGTCACTACGGACTCTTCCACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..TCACGTGCTGCGTCACTACGGACTCTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CGTGCTGCGTCACTACGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGCAAGATCGCGTGTGCGGC......................2311.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCGGCTTCTGGACCTG...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CACTACGGACTCTTCCACTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCAAGATCGCGTGTGC.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TACGGACTCTTCCACTCCGTCTGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CACGTGCTGCGTCACTACGGACTCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ACGGACTCTTCCACTCCGTCTGCGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................GCAAATC----------AACGATCACTGACCG.......................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TACATCGAGCAAGATCGCGTGTGCGGCT.....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGATCGCGTGTGCGGCTT....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCAAGATCGCGTGTGCGGC......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTGGACCTGGCTCTTCGT..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGCGTGTGCGGCTTCT..................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACATCGAGCAAGATCGC...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.......TGCTGCGTCACTACGGACTCTTCCACTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......GTGCTGCGTCACTACGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........TGCGTCACTACGGACTCTTCCACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CACTCCGTCTGCGTGCCCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GTGCGGCT-GG---AAACTTG..........................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GACTCTTCCACTCCGTCTGCGTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........GCTGCGTCACTACGGACTCTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGCGGCTTCTGGAC..............1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ATTCACGTGCTGCGTCACTACGGACTCTTCCACTCCGTCTGCGTGCCCAGGTTGGTAT--TGA-AC----------------TCCG-----CAT---------------------------C----------------------------------------GGCCTTG-CAGC--GACAGGTT------CAGCGCC---TGCCTG--TTCGCATGGCCTG------------------C-----------------------------T-----TGTGCGGCT-GG---AAACTTGATTGC--CATA-----------------------TGCAAATC----------AGCGATCACTGACCGA-TAT--T-----------CC-CA-AC-----C------T------------------TCTCCC-ACAGCTACATCGAGCAAGATCGCGTGTGCGGCTTCTGGACCTGGCTCTTCGTGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............GTCACTACGGACTCTTCCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
..................................................GTTGGTAT--TGA-AC----------------TCCG-----CAT---------------------------C----------------------------------------GGCCG............................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
....ACGTGCTGCGTCACTACGGACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
................ACTACGGACTCTTCCACTCCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGTGCGGCTTCTGGACC.............2011.00110000000000000000
.............GTCACTACGGACTCTTCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
...CACGTGCTGCGTCACTACGGACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TACATCGAGCAAGATCGCGTGTGCGGCT.....................2811.00100000010000000000
..........TGCGTCACTACGGACTCTTCCACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
......................................................GTAT--TGA-AC----------------TCCG-----CAT---------------------------C----------------------------------------GGCC.............................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.................CTACGGACTCTTCCACTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
....ACGTGCTGCGTCACTACGGACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
droSec2
ATTCACGTGCTGCGTCACTACGGACTCTTCCACTCCGTCTGCGTGCCCAGGTTGGTAT--TGA-AC----------------TCCG-----CAT---------------------------C----------------------------------------GGCCTTG-CATC--GACAGGTT------CATCGCC---TGCCTG--TTCGCATGGCCTG------------------C-----------------------------T-----TGTGCGGCT-GG---AAACTTGATTGC--CATA-----------------------TGCAAATC----------AGCGATCACTGACCGA-TAT--T-----------CC-CA-AC-----C------T------------------TCTCCC-ACAGCTACATCGAGCAAGATCGCGTGTGCGGCTTCTGGACCTGGCTCTTCGTGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACATCGAGCAAGATCGCGTGTGC.........................2511.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGTGTGCGGCTTCTGGACCT............2311.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTGGACCTGGCTCTTC....1911.0010010
..........................CTTCCACTCCGTCTGCGTGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
droYak3
ATTCACGTGCTGCGTCACTACGGACTCTTCCACTCCGTCTGCGTGCCCAGGTTGGTAT--TGA-AC----------------CCCT--TCCCATCA-------------------------C----------------------------------------AGCCTTT-CATC--GTCGGGTT------CAGCGCC---TG------CCCGCATGACCTG------------------C-----------------------------T-----TTTGAGGCT-GG---AAACTTGATCCC----CA-----------------------TGCAAATC----------ACCGATCACTGACCGA-TAT--T-----------CC-CA-AC-----C------T------------------TCTCCC-ACAGCTACATCGAGCAAGATCGCGTGTGCGGCTTCTGGACCTGGCTCTTCGTGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TACATCGAGCAAGATCGCGTG............................2111.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGGCTTCTGGACCTGGCT........2111.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TACATCGAGCAAGATCGCGTGTGCGGC......................2711.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGGCTTCTGGACCTGGCC........2111.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGCGTGTGCGGCTTCTGGACCTGGCT........2911.00100100000000
.............GTCACTACGGACTCTTCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
ATTCACGTGCTGCGTCACTAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACATCGAGCAAGATCGCGTG............................2211.00100000010000
..........TGCGTCACTACGGACTCTTCCACTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
........................CTCTTCCACTCCGTCTGCGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
droEre2
ATTCACGTGCTGCGTCACTACGGACTCTTCCACTCCGTCTGCGTGCCCAGGTTGGTAT--TGA-GC----------------TCCGCGTCGCAT---------------------------C----------------------------------------AGCCTTG-CATC--GTCGGGTT------CAGCGAC---GATC-A--CACGCGTGATCTG------------------A-----------------------------T-----CATGAGGCT-GG---AAACTTGATCCC----CA-----------------------TGCAAATC----------ACCGATCACTGACCGA-TAT--T-----------CC--A-AC-----C------T------------------TCTCCC-ACAGCTACATCGAACAAGATCGCGTGTGCGGCTTCTGGACCTGGCTCTTCGTGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACATCGAACAAGATCGCGTGTG..........................2611.0010000100
.............GTCACTACGGACTCTTCCACTCCGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
...CACGTGCTGCGTCACTACGGACTCTTCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000100
..............................CACTCCGTCTGCGTGCCCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAAGATCGCGTGTGCGGC......................2111.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACATCGAACAAGATCGC...............................2111.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TACATCGAACAAGATCGCGT.............................2011.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGAACAAGATCGCGTGTGCC........................2211.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGATCGCGTGTGCGGC......................2011.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................GA-TAT--T-----------CC--A-AC-----C------T------------------TCTCCC-ACA...................................................2211.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCGAACAAGATCGCGTGTGCGGC......................2611.0010000100

Generated: 05/18/2015 at 06:41 AM