ID:

dps_3367

 Coordinate:

XR_group8:7861712-7861862 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-25.7 -25.4 -24.9

Flybase annnotation

exon [dpse_GLEANR_8650:4]; CDS [Dpse\GA19221-cds]; intron [Dpse\GA19221-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTTCGACGAGGTCAAAGAATGCTGCTGTGCACCTGCCTGGGCCAAGAAGTGTAAGTACCAGATACAAATAGAGATTCGCATGAATTCGAATGAGGCATCCACTGGCACTGCCACTGCCACTGGCACTGCCATCGTGTGTGTGGAGTCACAATATCTAATGCTAGATGCTAAATCGCATGCCACTCACACATGGCCAGGGATTAACAAAGCAATGCTAATTTAATACTGTAAATATACTTTTTCAATGATTC
******************************************************************************************.((.((((...((((((((.((((.(((((((((...))))..))).))))))))).............)))))))))....))***************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 GSM444067
head
 GSM343916
embryo
.........................................................................................................................................................TCTAATGCTAGATGCTAAATC............................................................................. 21 0 1 2.00 2 2 0 0 0
..........................................................................................TGAGGCATCCACTGGCACTGC............................................................................................................................................ 21 0 1 2.00 2 2 0 0 0
......CGAGGTCAAAGAATGCTGCT................................................................................................................................................................................................................................. 20 0 1 2.00 2 0 2 0 0
...CGACGAGGTCAAAGAATGCTG................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
.........................................................................................GTGAGGCATCCACTGGCGCTG............................................................................................................................................. 21 2 1 1.00 1 1 0 0 0
......................TGCTGTGCACCTGCCTGGGCC................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0
.............................................................................................................................CTGCCATCGTGTGTGTGGAGT......................................................................................................... 21 0 1 1.00 1 1 0 0 0
...............................................................................ATGAATTCGAATGAGGCATCC....................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
....................................................................................TTCGAATGAGGCATCCACTG................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
.........................................................................................ATGAGGCATCCACTGGCACTG............................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
......................TGCTGTGCACCTGCCTGGGC................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0
.................................................................................................................CTGCCACTGGCACTGCCATCG..................................................................................................................... 21 0 1 1.00 1 1 0 0 0
..............................................................................CATGAATTCGAATGAGGCATC........................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0
......CGAGGTCAAGGAATGCTGCTG................................................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0
..........................GTGCACCTGCCTGGGCCAAGAAGT......................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0
....................................................................................TTCGAATGAGGCATCCACTGG.................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
............................................................................CGCATGAATTCGAATGAGGCATC........................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0
................................................................................TGAATTCGAATGAGGCATCCA...................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
........................................................................................AATGAGGCATCCACTGGCACT.............................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
.......................GCTGTGCACCTGCCTGGGCC................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................................................................................ATACTGTAAATATACTTTTTC........ 21 0 1 1.00 1 1 0 0 0
........AGGTCAAAGAATGCTGCTGTG.............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
.....................CTGCTGTGCACCTGCCTGG................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0
............................................................................................................................................................................................................................TAATACTGTCAATATAATTTGTC........ 23 3 1 1.00 1 0 0 1 0
.................................TACCTGGGCCAAGAAGTGAA...................................................................................................................................................................................................... 20 2 8 0.25 2 2 0 0 0
....................GATGCGGTGAACCTGCCTG.................................................................................................................................................................................................................... 19 3 7 0.14 1 1 0 0 0
.................................TACCTGGGCCAAGAAGTGAAAA.................................................................................................................................................................................................... 22 3 7 0.14 1 1 0 0 0
....................................................................TAGAGATGCGCATGAATG..................................................................................................................................................................... 18 2 14 0.07 1 0 0 0 1
.....................................................................................................CTGGCACTGCCACTGCCACTG................................................................................................................................. 21 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

GAAGCTGCTCCAGTTTCTTACGACGACACGTGGACGGACCCGGTTCTTCACATTCATGGTCTATGTTTATCTCTAAGCGTACTTAAGCTTACTCCGTAGGTGACCGTGACGGTGACGGTGACCGTGACGGTAGCACACACACCTCAGTGTTATAGATTACGATCTACGATTTAGCGTACGGTGAGTGTGTACCGGTCCCTAATTGTTTCGTTACGATTAAATTATGACATTTATATGAAAAAGTTACTAAG
*****************************************************************************.((.((((...((((((((.((((.(((((((((...))))..))).))))))))).............)))))))))....))****************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body
.................................................................................................................................................................................................................GTTACGATTAAATTATGACAT..................... 21 0 1 2.00 2 0 2
.................................ACGGACCCGGTTCTTCACAT...................................................................................................................................................................................................... 20 0 1 2.00 2 2 0
.........................................GGTTCTTCACATTCATGGTCT............................................................................................................................................................................................. 21 0 1 2.00 2 2 0
........................................................................................................................ACCGTGGCGGTAGCACACAC............................................................................................................... 20 1 1 1.00 1 1 0
.........................................................................................................................CCGTGACGGTAGCACACAC............................................................................................................... 19 0 1 1.00 1 1 0
............................................TCTTCACATTCATGGTCTATG.......................................................................................................................................................................................... 21 0 1 1.00 1 1 0
........................................................................................................................................................................................GTGTGTACCGGTCCCTAATTG.............................................. 21 0 1 1.00 1 1 0
.............................................................................................................................................................................................................TTTCGTTACGATTAAATTATG......................... 21 0 1 1.00 1 0 1
...GCTGCTCCAGTTTCTTACGA.................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0
........................................................................................................................ACCGTGACGGTAGCACACACA.............................................................................................................. 21 0 1 1.00 1 0 1
..................................CGGACCCGGTTCTTCACGTT..................................................................................................................................................................................................... 20 1 1 1.00 1 1 0
................................................CACATTCATGGTCTATGTTTA...................................................................................................................................................................................... 21 0 1 1.00 1 1 0
...................................................................................................................................AGCACACACACCTCAGTGTTA................................................................................................... 21 0 1 1.00 1 1 0
....CTGCTCCAGTTTCTTACGAC................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0
........................................................................................................................................ACACACCTCAGTGTTATAGAT.............................................................................................. 21 0 1 1.00 1 1 0
................................................................................................................................................CAGTGTTATAGATTACGATC....................................................................................... 20 0 1 1.00 1 1 0
...........................................................................................................................................CACCTCAGTGTTATAGATTA............................................................................................ 20 0 1 1.00 1 1 0
.................................................................TTTATCTCTAAGCGTACTTAA..................................................................................................................................................................... 21 0 1 1.00 1 1 0
.........................................................................................................................CCGTGACGGTAGCACACACA.............................................................................................................. 20 0 1 1.00 1 1 0
...............................................................................................................................................................................................CCGGTCCCTAATTGTTTCGTT....................................... 21 0 1 1.00 1 1 0
.........................................................................................................................CCGTGGCGGTAGCACACACAC............................................................................................................. 21 1 1 1.00 1 1 0
.................................................ACGTTCATGGTCTATGTTTAT..................................................................................................................................................................................... 21 1 1 1.00 1 1 0
..............................................................................................................................................................................................ACCGGTCCCTAATTGTTTCG......................................... 20 0 1 1.00 1 1 0
........................GACACGTGGACGGACCCGGT............................................................................................................................................................................................................... 20 0 1 1.00 1 1 0
.................................ACGGACCCGGTTCTTCACATT..................................................................................................................................................................................................... 21 0 1 1.00 1 1 0
.......................................................................................................................................CACACACCTCAGTGTTATAGA............................................................................................... 21 0 1 1.00 1 1 0
.........................................................................................................................CCGTGGCGGTAGCGCACACA.............................................................................................................. 20 2 2 0.50 1 1 0
...................................................................................................................CGGTGGCCGTGACGGTAGCA.................................................................................................................... 20 1 3 0.33 1 0 1
........................................................................................................................................................................................................................................AGATGAAAAAGTTACTAG. 18 2 13 0.08 1 1 0
...................................................................................................................................................AGTTTTAGATTACGATGTA..................................................................................... 19 3 20 0.05 1 1 0
.......................................................................................................CCGTGACGGTGACGGTGACC................................................................................................................................ 20 0 20 0.05 1 1 0
.....................................................................................................................................................................................................................................TTAAGATGAAAAAGTTACGA.. 20 3 20 0.05 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XR_group8:7861662-7861912 + dps_3367 CTTCGACGAGGTCAAAGAATGCTGCTGTGCACCTGCCTGGGCCAAGAAGTGTAAGTACCAGA-----------TACAAA-----------TAGAGATTC-G-CATG----AATTCGAATGAGGCATCCACT------------GGCACTGCCACTGCCACTGGCACT------------GCC------ATCGTGTG-----------------------------------------------------------------TG--TGGAGTCACAATATCTAATGCTAGATGCTAAATCGCATG--------------CCACTC-------ACACAT----GGC------CAGGGA-TTAACAAAGCAATGCTAATT-TAATACTGTAAATATAC-TTTTTCAATG--ATTC
droPer2 scaffold_40:51449-51713 + CTTCGACGAGGTCAAAGAATGCTGCTGTGCACCTGCCTGGGCCAAGAAGTGTAAGTACCAGA-----------TACAAA-----------TAGAGATTC-G-CATG----AATTCGAATGAGGCATCCACTGGCACTGGCACTGGCACTGCCACTGCCACTGGCACT------------GCC------ATCGTGTG-----------------------------------------------------------------TGTGTGGAGTCACAATATCTAATGCTAGATGCTAAATCGCATG--------------CCACTC-------ACACAT----GGC------CAGGGA-TTAACAAAGCAATGCTAATT-TAATACTGTAAATATAC-TTTTTCAATG--ATTC
droWil2 scf2_1100000004830:510521-510706 - TTTTGAAGAGGTGAAAGAATGTTGTTGTGCCAGTGCTTTGGCCAAAGAATGTAAGTAATCCG-----------TTTATA--T-ACC--TATATGTA-----------------------------------------------------------------------------------------------TTATTAGGTATATAAAAATC---T-------------------------------------------------------------------ATGATATAT------ATGTACA---------------TATGT-------ACACAT----GTTTTGGGCGGGGGA-TTAACAATGCTTTGCTAATTTTTATAACGTAAATAGAT-CTCTC-----------
droVir3 scaffold_13049:18892353-18892565 - dvi_20542 CTTCGAGGAGGTCAAGGAATGCTGCTGTGCAGCCGCTTTGGTCAGCGAGTGTAAGTGTGATT-----------------------------GGA-ATTTTTTTTTGGTTGAGTTTAGGCAATAT-----TT------------GTTATTTAACC---------------------------------------------------------AGCCCCTTGGATATATGATCAA-AAAATACTTATATAGGTGCT------ACA----------CTGAAATCAATGCTAAAC------ACACACA-----------------CAC-------ACACCC----ATC------TTAAGA-TCAACAAAACGGTGCTAA-------------------------------------
droMoj3 scaffold_6680:12333049-12333294 + CTTCGAGGAAGTCAAGGAATGCTGTTGTGTATCCGCTTTTCTCAGAGAGTGTAAGTGCCATT-----------------------------GGA-ATGT-T-TATGGAAGAGTTGGAACAAG-------TT------------GGTATTTGGAC---------------------------------------------------AGCAGCAGCACAGCAGATCAATGATCAATAAAATACTTATATATGTATAACGTGTATACATAAACACTCAGCAGCCA-------AC------GCTC--A--------------CCACTC-------ATACACACCCAGT------TGAAGA-TTAACAAAGCAATGCTAATT-TTATAATGTAAATA--------------------
droGri2 scaffold_15110:19858942-19859196 - CTTTGAGGAAGTCAAGGAATGCTGTTGCGCATCCGCTTTGGTCCGCGAGTGTAAGTGTGATT-----------------------------AGA-ATCT-G-TATGAATCACTTTCAACAAGATAT-----------------TTTATTTGAAG---------------------------------------------------------AGCACTGGATATATATGTCCGT-AATATACTAATACTTGTGC-------ATA----------CAGAAATCAATGCTAAAT------GCTGGGGTTCCGCAACATTCAACACTC-------ACACACACCCATC------TAGGGA-TTAACAAAGCGATGCTAATT-TCATAATGTAAATAGAC-A----CGAT-------
droAna3 scaffold_13337:10812969-10813172 + TTTCGCAGAAGTCAAGGAGTGCTGCTGCGCCAAGGCATTTTACAGAAAGTGTAAGTATCAAG-----------TGTATTCCTTAAAAC--TGGGAGTTC-G----------------GTGG--------------------------------------------------GGCACGTAGGC------ATTTCATTTGGAACCACAGCGGCGGCA-------------------------------------------------------------------CTGCTAAAT------GCTCATG--------------CCACTA-------ACACAT----GGG------GATGGATTTAACAAAGCGATGCTAATT-TAATAATGTAAATATAC-----------------
droBip1 scf7180000396569:566785-566984 - GTTCGCAGAAGTCAAGGAGTGCTGCTGCGCCAAGGCCTTTTACAACAAGTGTAAGTATCAAG-----------TGCATTCCTTGA-------------------------------AGCGAGAAGT----------------------------------TCGGTG-----GGCACGTAGGC------ACATCATTTGGAACCACAGTGGC---A-------------------------------------------------------------------CTGCTGAAT------GCTCATG--------------GCACTA-------ACACAT----GGG------GATGGGTTTAACAAAGCGATGCTAATT-TAATAATGTAAATATAC-----------------
droKik1 scf7180000302441:3170575-3170792 + CTTCGCGGAGGTCAAGGAGTGCTGCTGCGCTGGGACCTGGGTCAAGAAGTGTAAGTATTTTC----CATCCAATACG-A-----------TGGAGACT--------------------------------------------------------------------------GCACGTAGCCATAGTGTTCGCATCTGGTATCACACTAGC---A-------------------------------------------------------------------ATGCTAAAT------GCTCATG--------------CCACTCCGAACGAACACAC----GGA------GCGGGA-TTAACAAAGCGATGCTAATT-TAATAATGTAAATATACAGTTTTCGATG--ATTC
droFic1 scf7180000454113:1880279-1880509 - ATTCGTTGAGATCAAGGAGTGCTGCTGCGCTGAGATCTGGCTAAAGAAGTGTAAGTATTGAG-----------TTCATT--T-GAA----TAGATAC-----------CCACCTCCGATGAGGTGT----------------------------------TCATGGGTATCTGATCATAGTC------AATGCACCTGGAACCACAATTCA---C-------------------------------------------------------------------ATGCTAAAT------GCCCATG--------------CCACTC-------ACACAT----GGG------GAGGGA-TTAACAAAGCGATGCTAATT-TAATATTGTAAATACAC-CTTTTCGATG--AATC
droEle1 scf7180000491193:4777179-4777414 + ATTTGGGGCGGTCAAGGAGTGCTGCTGCGCTGAGATCTGGATCAAGAAGTGTAAGTATTATA-----------CATACA-----------TGAACACTA-T-CATGCCTCACTCCCAATGAGTTAT----------------------------------TCACGGTGCTCTGCTTGAAGTC------ATCGCATCTGGAAATACAATATC---C-------------------------------------------------------------------ATGCTAAAA------GCCCACG--------------CCACTC-------ACACAT----GAG------AAGGGA-TTAACAAAGCAATGCTAATT-TAATAATGTAAATACAC-TTCTTCGATG--ATTT
droRho1 scf7180000769696:57844-58079 + ATTTGCTGCGGTCAAGGAGTGCTGCTGCGCTGAGATCTGGATCAAGAAGTGTAAGTATAAGG-----------TATATT-----------TGGAAACTC-T-CATGCTTCACTCCCAATGAGGCGT----------------------------------TCATGGGGCTCCGCTCATAGTC------ATTGCATCTGGAATCACAATATC---C-------------------------------------------------------------------ATGCTAAAT------GCCCATG--------------CCACTC-------ACACAT----GGG------GAGGGA-TTAACAAAGCAATGCTAATT-TAATAATGTAAATACAT-TTTTTCGATC--ATTC
droBia1 scf7180000302193:5613280-5613469 - ATTCGTGCAGGTCAAGGAGTGCTGCTGCGCTGAGATCTGGTTCAAGAAGTGTAAGTATCATT-----------CACGTT--------------------------------------------------------------------------------------------TGCTCATAGTC------ATCGCATCTGGCACCACAATATC---C-------------------------------------------------------------------ACGCTA-AT------GTCCATG--------------CCTCTC-------ACACAT----GGG------GAGGGA-TTAACAAATCAATGCTAATT-TAATAACGTAAATATAC-TTCTCCGATG--ATTC
droTak1 scf7180000415254:219376-219597 - ATTCGTCCAGGTCAAGGAGTGCTGCTGCGCTGAGATCTGGCTCAAGAAGTGTAAGTATTTCA-----------TATATT-----------TGGAAACT---------------ACCAAT-AGGCAT----------------------------------TCGTGGAACTTTGCTCGTAGTC------ATCGCATCTGGAAGCACAATATC---C-------------------------------------------------------------------ATGCTAAAT------GCTCATG--------------CCACTC-------ACACAT----GAG------GAGGGA-TTAACAAAGCAATGCTAATT-TAATAACGTAAATATAC-TTTTTCGATG--ATTC
droEug1 scf7180000409711:5538405-5538631 - ATTTGTGCAGGTCAAGGAGTGCTGTTGCGCTGAGATCTGGTTTAAAAAGTGTAAGTATCATA-----------AACATT-------------------T-G-CATTACTTACTTCCCATAGAGCAT----------------------------------TTATCA-GCTTAACTCGTAATA------TTTTCATCTGGAATAACAAAATC---C-------------------------------------------------------------------ATGCTATAT------GCCCATG--------------CCACTC-------ACACAT----GAG------GAGGGA-TTAACAAAGCAATGCTAATT-TAATAATGTAAATATAC-TTTTTCGATG--ATTC
dm3 chr3L:20442686-20442901 + ATTCGTCCAGGTCAAGGAGTGCTGCTGTGCTGAGATCTGGATCAAGAAGTGTAAGTACTAGA-----------TACAAC-----------TGCCAACCC------------------CTAGGGCAT----------------------------------TCGTGG------------AATC------ACCTCATCTGGTAGCTTGATA--------------------------------------------------------------------TATCCGTGCTAAAT------GCCCATG--------------CCACTCC------ACACAT----GAG--AAA-GGGGGA-TTAACAAAGCAATGCTAATT-TAATAACGTAAACATAC-TTCCCCGATTATATTC
droSim2 3l:20011514-20011704 + ATTCGTCCAGGTCAAGGAGTGCTGCTGTGCTGAGATCTGGATCAAGAAGTGTAAGTACGAGA-----------TACAAT----------------------------------------------------------------------------------------------------ATC------TTCGCATCTGGTACACGAATA--------------------------------------------------------------------TATCCGTGCTAAAT------GACCATG--------------CCACTC-------ACACAT----GAG--AAAGGAGGGA-TTAACAAAGCAATGCTAATT-TAATAACGTAAACATAC-TTCCCCGATTATATTC
droSec2 scaffold_11:337695-337886 + ATTCGTCCAGGTCAAGGAGTGCTGCTGTGCTGAGATCTGGATCAAGAAGTGTAAGTACGAGA-----------TACAAT----------------------------------------------------------------------------------------------------ATC------TTCGCATCTGGTAGCACGAATA-------------------------------------------------------------------TATCCGTGCTAAAT------GCCCATG--------------CCACTC-------ACACAT----GAG--AAAGGAGGGA-TTAACAAAGCAATGCTAATT-TAATAACGTAAACATAC-TTCCCCGATTATATTC
droYak3 3L:20113262-20113464 - ATTCGTGCAGGTCAAGGAATGCTGCTGTGCTGAGATCTGGATCAAGAAGTGTAAGTACCAGTTCTACA-----GACGAA-----------TGAAAACT---------------------------------------------------------------CGTGG------------GATC------ATCGCATCTGGAAGCACAGTATG---A-------------------------------------------------------------------GTGCTAAAT------GCCCATG--------------CCACTC-------ACACAT----GAG------AAGGGA-TTAACAAAGCAATGCTAATT-TAATAACGTAAACATAC-TTCTGCGATT--ATTC
droEre2 scaffold_4784:20144253-20144471 + ATTCGTGCAGGTCAAGGAATGCTGCTGTGCTGAGATCTGGATCAAGAAGTGTAAGTAGTAGA-----------TCCACC----------------------------------------------------AGATCCACAAATGCCAACTCCTCTGGCACTCGGGGC------------ACC------ATCGCATCTGGAAGCCCAATGGC---C-------------------------------------------------------------------GTGCTAAAT------GCCCATG--------------CCACTC-------ACACAC----GAG------AAGGGA-TTAACAAAGCAATGCTAATT-TAATAACGTAAACATAC-TTCTGCAATT--ATTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CTTCGACGAGGTCAAAGAATGCTGCTGTGCACCTGCCTGGGCCAAGAAGTGTAAGTACCAGA-----------TACAAA-----------TAGAGATTC-G-CATG----AATTCGAATGAGGCATCCACT------------GGCACTGCCACTGCCACTGGCACT------------GCC------ATCGTGTG-----------------------------------------------------------------TG--TGGAGTCACAATATCTAATGCTAGATGCTAAATCGCATG--------------CCACTC-------ACACAT----GGC------CAGGGA-TTAACAAAGCAATGCTAATT-TAATACTGTAAATATAC-TTTTTCAATG--ATTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................TCTAATGCTAGATGCTAAATC.................................................................................................................2112.0020200000000
......................................................................................................................TGAGGCATCCACT------------GGCACTGC.....................................................................................................................................................................................................................................................................2112.0020200000000
......CGAGGTCAAAGAATGCTGCT..................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000002000
...CGACGAGGTCAAAGAATGCTG....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................TGCTGTGCACCTGCCTGGGCC.................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.....................................................................................................................................................................CT------------GCC------ATCGTGTG-----------------------------------------------------------------TG--TGGAGT.............................................................................................................................................2111.0010100000000
.......................................................................................................ATG----AATTCGAATGAGGCATCC............................................................................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................TTCGAATGAGGCATCCACT------------G............................................................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................ATGAGGCATCCACT------------GGCACTG......................................................................................................................................................................................................................................................................2111.0010100000000
......................TGCTGTGCACCTGCCTGGGC..................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........................................................................................................................................................CTGCCACTGGCACT------------GCC------ATCG............................................................................................................................................................................................................................2111.0010100000000
......................................................................................................CATG----AATTCGAATGAGGCATC.............................................................................................................................................................................................................................................................................................2111.0010100000000
..........................GTGCACCTGCCTGGGCCAAGAAGT..........................................................................................................................................................................................................................................................................................................................................................................2411.0010000001000
................................................................................................................TTCGAATGAGGCATCCACT------------GG...........................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................C-G-CATG----AATTCGAATGAGGCATC.............................................................................................................................................................................................................................................................................................2311.0010100000000
........................................................................................................TG----AATTCGAATGAGGCATCCA...........................................................................................................................................................................................................................................................................................2111.0010100000000
....................................................................................................................AATGAGGCATCCACT------------GGCACT.......................................................................................................................................................................................................................................................................2111.0010100000000
.......................GCTGTGCACCTGCCTGGGCC.................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................ATACTGTAAATATAC-TTTTTC..........2111.0010100000000
........AGGTCAAAGAATGCTGCTGTG...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.....................CTGCTGTGCACCTGCCTGG....................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.................................................................................................................................CT------------GGCACTGCCACTGCCACTG..........................................................................................................................................................................................................................................................21200.0510100000000
droPer2
CTTCGACGAGGTCAAAGAATGCTGCTGTGCACCTGCCTGGGCCAAGAAGTGTAAGTACCAGA-----------TACAAA-----------TAGAGATTC-G-CATG----AATTCGAATGAGGCATCCACTGGCACTGGCACTGGCACTGCCACTGCCACTGGCACT------------GCC------ATCGTGTG-----------------------------------------------------------------TGTGTGGAGTCACAATATCTAATGCTAGATGCTAAATCGCATG--------------CCACTC-------ACACAT----GGC------CAGGGA-TTAACAAAGCAATGCTAATT-TAATACTGTAAATATAC-TTTTTCAATG--ATTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................CTGGGCCAAGAAGTGTAAGTG...................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.............................................................................................................................................................................................TCGTGTG-----------------------------------------------------------------TGTGTGGAGTCA...........................................................................................................................................1911.001000001
droWil2
TTTTGAAGAGGTGAAAGAATGTTGTTGTGCCAGTGCTTTGGCCAAAGAATGTAAGTAATCCG-----------TTTATA--T-ACC--TATATGTA-----------------------------------------------------------------------------------------------TTATTAGGTATATAAAAATC---T-------------------------------------------------------------------ATGATATAT------ATGTACA---------------TATGT-------ACACAT----GTTTTGGGCGGGGGA-TTAACAATGCTTTGCTAATTTTTATAACGTAAATAGAT-CTCTC-----------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........GGTGAAAGAATGTTGTTGTGCCAGT..........................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
..............AAGAATGTTGTTGTGCCAGTG.........................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
..................ATGTTGTTGTGCCAGTGC........................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
...............................AGTGCTTTGGCCAAAGAATGGCG......................................................................................................................................................................................................................................................................................................................................................................2311.00100010
droVir3
CTTCGAGGAGGTCAAGGAATGCTGCTGTGCAGCCGCTTTGGTCAGCGAGTGTAAGTGTGATT-----------------------------GGA-ATTTTTTTTTGGTTGAGTTTAGGCAATAT-----TT------------GTTATTTAACC---------------------------------------------------------AGCCCCTTGGATATATGATCAA-AAAATACTTATATAGGTGCT------ACA----------CTGAAATCAATGCTAAAC------ACACACA-----------------CAC-------ACACCC----ATC------TTAAGA-TCAACAAAACGGTGCTAA-------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................TTGGTCAGCGAGTGTAAGTG...................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.......GAGGTCAAGGAATGCTGCTGT................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................TTAACC---------------------------------------------------------AGCCCCTTGGATATA..........................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........................TGTGCAGCCGCTTTGGTCAGCGA............................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000010000000000000000000000000000000000000000000000
..................................................GTAAGTGTGATT-----------------------------GGA-ATTTTT.......................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........GGTCAAGGAATGCTGCTGTGCA.............................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
droMoj3
CTTCGAGGAAGTCAAGGAATGCTGTTGTGTATCCGCTTTTCTCAGAGAGTGTAAGTGCCATT-----------------------------GGA-ATGT-T-TATGGAAGAGTTGGAACAAG-------TT------------GGTATTTGGAC---------------------------------------------------AGCAGCAGCACAGCAGATCAATGATCAATAAAATACTTATATATGTATAACGTGTATACATAAACACTCAGCAGCCA-------AC------GCTC--A--------------CCACTC-------ATACACACCCAGT------TGAAGA-TTAACAAAGCAATGCTAATT-TTATAATGTAAATA--------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........GTCAAGGAATGCTGTTGT................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
................................................................................................................................................GTATTTGGAC---------------------------------------------------AGCAGCAGCACAGCA................................................................................................................................................................................................2511.001000001
.........................TGTGTATCCGCTTTTCTCAGAGAGTGGC.......................................................................................................................................................................................................................................................................................................................................................................2811.001000001
..........GTCAAGGAATGCTGTTGTGTA.............................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
........................................................................................................................................................................................................................AGCAGATCAATGATCAATAAAATACTT.........................................................................................................................................................................2711.001100000
.............................TATCCGCTTTTCTCAGAGAGT..........................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...CGAGGAAGTCAAGGAATGCTGTTGTGT..............................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..................ATGCTGTTGTGTATCCGC........................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
CTTCGAGGAAGTCAAGGAATGCTGTT..................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.................AATGCTGTTGTGTATCCGCTTTTCT..................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.................AATGCTGTTGTGTATCCGCTTTTC...................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
............................GTATCCGCTTTTCTCAGAGAGT..........................................................................................................................................................................................................................................................................................................................................................................2211.001100000
droGri2
CTTTGAGGAAGTCAAGGAATGCTGTTGCGCATCCGCTTTGGTCCGCGAGTGTAAGTGTGATT-----------------------------AGA-ATCT-G-TATGAATCACTTTCAACAAGATAT-----------------TTTATTTGAAG---------------------------------------------------------AGCACTGGATATATATGTCCGT-AATATACTAATACTTGTGC-------ATA----------CAGAAATCAATGCTAAAT------GCTGGGGTTCCGCAACATTCAACACTC-------ACACACACCCATC------TAGGGA-TTAACAAAGCGATGCTAATT-TCATAATGTAAATAGAC-A----CGAT-------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
TTTCGCAGAAGTCAAGGAGTGCTGCTGCGCCAAGGCATTTTACAGAAAGTGTAAGTATCAAG-----------TGTATTCCTTAAAAC--TGGGAGTTC-G----------------GTGG--------------------------------------------------GGCACGTAGGC------ATTTCATTTGGAACCACAGCGGCGGCA-------------------------------------------------------------------CTGCTAAAT------GCTCATG--------------CCACTA-------ACACAT----GGG------GATGGATTTAACAAAGCGATGCTAATT-TAATAATGTAAATATAC-----------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................TTGGAACCACAGCGGCGGCA-------------------------------------------------------------------..................................................................................................................................2012.002000101
.........AGTCAAGGAGTGCTGCTGCGCCAAGGC........................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
TTTCGCAGAAGTCAAGGAGTGCTGCT..................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.............AAGGAGTGCTGCTGCGCCAAGG.........................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..................GTGCTGCTGCGCCAAGGCAT......................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
................GAGTGCTGCTGCGCCAAGG.........................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........TCAAGGAGTGCTGCTGCGC..............................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..............................................................................................................................................................................................TTCATTTGGAACCACAGCGG..........................................................................................................................................................................................................2011.001100000
.......GAAGTCAAGGAGTGCTGCTG.................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
................................................................................................................................................................................................CATTTGGAACCACAGCGGCGG.......................................................................................................................................................................................................2111.001000001
................GAGTGCTGCTGCGCCAAGGCA.......................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..TCGCAGAAGTCAAGGAGTG.......................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........TCAAGGAGTGCTGCTGCGCCAAGGC........................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....................................................................................................................................................................................C------ATTTCATTTGGAACCACAGC............................................................................................................................................................................................................2111.001100000
.........AGTCAAGGAGTGCTGCTG.................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.............................................................G-----------TGTATTCCTTAAAAC--TGGGA.............................................................................................................................................................................................................................................................................................................................2111.001000010
droBip1
GTTCGCAGAAGTCAAGGAGTGCTGCTGCGCCAAGGCCTTTTACAACAAGTGTAAGTATCAAG-----------TGCATTCCTTGA-------------------------------AGCGAGAAGT----------------------------------TCGGTG-----GGCACGTAGGC------ACATCATTTGGAACCACAGTGGC---A-------------------------------------------------------------------CTGCTGAAT------GCTCATG--------------GCACTA-------ACACAT----GGG------GATGGGTTTAACAAAGCGATGCTAATT-TAATAATGTAAATATAC-----------------SizeHit CountTotal NormTotal
No Reads
droKik1
CTTCGCGGAGGTCAAGGAGTGCTGCTGCGCTGGGACCTGGGTCAAGAAGTGTAAGTATTTTC----CATCCAATACG-A-----------TGGAGACT--------------------------------------------------------------------------GCACGTAGCCATAGTGTTCGCATCTGGTATCACACTAGC---A-------------------------------------------------------------------ATGCTAAAT------GCTCATG--------------CCACTCCGAACGAACACAC----GGA------GCGGGA-TTAACAAAGCGATGCTAATT-TAATAATGTAAATATACAGTTTTCGATG--ATTCSizeHit CountTotal NormTotal
No Reads
droFic1
ATTCGTTGAGATCAAGGAGTGCTGCTGCGCTGAGATCTGGCTAAAGAAGTGTAAGTATTGAG-----------TTCATT--T-GAA----TAGATAC-----------CCACCTCCGATGAGGTGT----------------------------------TCATGGGTATCTGATCATAGTC------AATGCACCTGGAACCACAATTCA---C-------------------------------------------------------------------ATGCTAAAT------GCCCATG--------------CCACTC-------ACACAT----GGG------GAGGGA-TTAACAAAGCGATGCTAATT-TAATATTGTAAATACAC-CTTTTCGATG--AATCSizeHit CountTotal NormTotal
No Reads
droEle1
ATTTGGGGCGGTCAAGGAGTGCTGCTGCGCTGAGATCTGGATCAAGAAGTGTAAGTATTATA-----------CATACA-----------TGAACACTA-T-CATGCCTCACTCCCAATGAGTTAT----------------------------------TCACGGTGCTCTGCTTGAAGTC------ATCGCATCTGGAAATACAATATC---C-------------------------------------------------------------------ATGCTAAAA------GCCCACG--------------CCACTC-------ACACAT----GAG------AAGGGA-TTAACAAAGCAATGCTAATT-TAATAATGTAAATACAC-TTCTTCGATG--ATTTSizeHit CountTotal NormTotal
No Reads
droRho1
ATTTGCTGCGGTCAAGGAGTGCTGCTGCGCTGAGATCTGGATCAAGAAGTGTAAGTATAAGG-----------TATATT-----------TGGAAACTC-T-CATGCTTCACTCCCAATGAGGCGT----------------------------------TCATGGGGCTCCGCTCATAGTC------ATTGCATCTGGAATCACAATATC---C-------------------------------------------------------------------ATGCTAAAT------GCCCATG--------------CCACTC-------ACACAT----GGG------GAGGGA-TTAACAAAGCAATGCTAATT-TAATAATGTAAATACAT-TTTTTCGATC--ATTCSizeHit CountTotal NormTotal
No Reads
droBia1
ATTCGTGCAGGTCAAGGAGTGCTGCTGCGCTGAGATCTGGTTCAAGAAGTGTAAGTATCATT-----------CACGTT--------------------------------------------------------------------------------------------TGCTCATAGTC------ATCGCATCTGGCACCACAATATC---C-------------------------------------------------------------------ACGCTA-AT------GTCCATG--------------CCTCTC-------ACACAT----GGG------GAGGGA-TTAACAAATCAATGCTAATT-TAATAACGTAAATATAC-TTCTCCGATG--ATTCSizeHit CountTotal NormTotal
No Reads
droTak1
ATTCGTCCAGGTCAAGGAGTGCTGCTGCGCTGAGATCTGGCTCAAGAAGTGTAAGTATTTCA-----------TATATT-----------TGGAAACT---------------ACCAAT-AGGCAT----------------------------------TCGTGGAACTTTGCTCGTAGTC------ATCGCATCTGGAAGCACAATATC---C-------------------------------------------------------------------ATGCTAAAT------GCTCATG--------------CCACTC-------ACACAT----GAG------GAGGGA-TTAACAAAGCAATGCTAATT-TAATAACGTAAATATAC-TTTTTCGATG--ATTCSizeHit CountTotal NormTotal
No Reads
droEug1
ATTTGTGCAGGTCAAGGAGTGCTGTTGCGCTGAGATCTGGTTTAAAAAGTGTAAGTATCATA-----------AACATT-------------------T-G-CATTACTTACTTCCCATAGAGCAT----------------------------------TTATCA-GCTTAACTCGTAATA------TTTTCATCTGGAATAACAAAATC---C-------------------------------------------------------------------ATGCTATAT------GCCCATG--------------CCACTC-------ACACAT----GAG------GAGGGA-TTAACAAAGCAATGCTAATT-TAATAATGTAAATATAC-TTTTTCGATG--ATTCSizeHit CountTotal NormTotal
No Reads
dm3
ATTCGTCCAGGTCAAGGAGTGCTGCTGTGCTGAGATCTGGATCAAGAAGTGTAAGTACTAGA-----------TACAAC-----------TGCCAACCC------------------CTAGGGCAT----------------------------------TCGTGG------------AATC------ACCTCATCTGGTAGCTTGATA--------------------------------------------------------------------TATCCGTGCTAAAT------GCCCATG--------------CCACTCC------ACACAT----GAG--AAA-GGGGGA-TTAACAAAGCAATGCTAATT-TAATAACGTAAACATAC-TTCCCCGATTATATTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................CTGTGCTGAGATCTGGATCA................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ATCTGGATCAAGAAGTGTAAG.....................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGCTGCTGTGCTGAGATCTGG....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TCGTCCAGGTCAAGGAGT........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................CTCC------ACACAT----GAG--AAA-GGGGG.........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGTCCAGGTCAAGGAGTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTCGTCCAGGTCAAGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................GCTGTGCTGAGATCTGGATCAAGA.............................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GCTGAGATCTGGATCAAGAAGT..........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CCAGGTCAAGGAGTGCTGCTG.................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........................GTGCTGAGATCTGGATCAAGAAGTG.........................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................TGCTGAGATCTGGATCAAGAA............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................TGCTGTGCTGAGATCTGG....................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CTGTGCTGAGATCTGGATCAAT..............................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............AAGGAGTGCTGCTGTGCTGAG..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.........GGTCAAGGAGTGCTGCTGTGCTGAGA.........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................GTGCTGAGATCTGGATCAAGA.............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
..............................TGAGATCTGGATCAAGAAGTG.........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GTGCTGAGATCTGGATCAAG..............................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.....................CTGCTGTGCTGAGATCTGGATC.................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TCTGGTAGCTTGATA--------------------------------------------------------------------TATCC..................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................TAGA-----------TACAAC-----------TGCCAACCC------------------CT.....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCTGCTGTGCTGAGATCTGGATCAAG..............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........AGGTCAAGGAGTGCTGCTGTG...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................TAGGGCAT----------------------------------TCGTGG------------AATC------ACC.............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................AT----------------------------------TCGTGG------------AATC------ACCTCATCTGG.....................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ATTCGTCCAGGTCAAGGAGTGCTGCTGTGCTGAGATCTGGATCAAGAAGTGTAAGTACGAGA-----------TACAAT----------------------------------------------------------------------------------------------------ATC------TTCGCATCTGGTACACGAATA--------------------------------------------------------------------TATCCGTGCTAAAT------GACCATG--------------CCACTC-------ACACAT----GAG--AAAGGAGGGA-TTAACAAAGCAATGCTAATT-TAATAACGTAAACATAC-TTCCCCGATTATATTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................TATCCGTGCTAAAT------GACCATG--------------..............................................................................................2112.00220000000000000000
...........................................................................................................................................................................................................CGAATA--------------------------------------------------------------------TATCCGTGCTAAAT------G..................................................................................................................2111.00100000100000000000
.........................................................................TACAAT----------------------------------------------------------------------------------------------------ATC------TTCGCATCTGGT....................................................................................................................................................................................................................2111.00110000000000000000
.............................CTGAGATCTGGATCAAGAAGTGGC.......................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
............................GCTGAGATCTGGATCAAGAAGTGGC.......................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................CAT----GAG--AAAGGAGGGA-TTAAC..................................................2111.00100010000000000000
...................................................................................................................................................................................ATC------TTCGCATCTGGTACAC................................................................................................................................................................................................................1911.00100000100000000000
.............AAGGAGTGCTGCTGTGCC.............................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.......................GCTGTGCTGAGATCTGGATCAAGAAGTC.........................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................CAATGCTAATT-TAATAACGT.........................2011.00110000000000000000
..........................................................................ACAAT----------------------------------------------------------------------------------------------------ATC------TTCGCATCTGGT....................................................................................................................................................................................................................2011.00101000000000000000
.......................GCTGTGCTGAGATCTGGAT..................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
.............................................................................................................................................................................................................................................................................................................ATG--------------CCACTC-------ACACAT----GAG--AA................................................................2011.00100001000000000000
....GTCCAGGTCAAGGAGTGCTGG...................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.............................................................................AT----------------------------------------------------------------------------------------------------ATC------TTCGCATCTGGTACACG...............................................................................................................................................................................................................2211.00101000000000000000
..............................................................................T----------------------------------------------------------------------------------------------------ATC------TTCGCATCTGGTACACG...............................................................................................................................................................................................................2111.00101000000000000000
...........................TGCTGAGATCTGGATCAAG..............................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
....GTCCAGGTCAAGGAGTGCTGC...................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
droSec2
ATTCGTCCAGGTCAAGGAGTGCTGCTGTGCTGAGATCTGGATCAAGAAGTGTAAGTACGAGA-----------TACAAT----------------------------------------------------------------------------------------------------ATC------TTCGCATCTGGTAGCACGAATA-------------------------------------------------------------------TATCCGTGCTAAAT------GCCCATG--------------CCACTC-------ACACAT----GAG--AAAGGAGGGA-TTAACAAAGCAATGCTAATT-TAATAACGTAAACATAC-TTCCCCGATTATATTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................AGTGCTGCTGTGCTGAGATCTGG....................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
.......................GCTGTGCTGAGATCTGGAT..................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
.............................................GAAGTGTAAGTACGAGA-----------TACA...............................................................................................................................................................................................................................................................................................................................................2111.0010001
.................................GATCTGGATCAAGAAGTGGC.......................................................................................................................................................................................................................................................................................................................................................................2011.0010100
...................................................................................................................................................................................ATC------TTCGCATCTGGTAGCACG..............................................................................................................................................................................................................2111.0011000
.............AAGGAGTGCTGCTGTGCTGA...........................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
....................GCTGCTGTGCTGAGATCTGG....................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
....GTCCAGGTCAAGGAGTGCTGC...................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
droYak3
ATTCGTGCAGGTCAAGGAATGCTGCTGTGCTGAGATCTGGATCAAGAAGTGTAAGTACCAGTTCTACA-----GACGAA-----------TGAAAACT---------------------------------------------------------------CGTGG------------GATC------ATCGCATCTGGAAGCACAGTATG---A-------------------------------------------------------------------GTGCTAAAT------GCCCATG--------------CCACTC-------ACACAT----GAG------AAGGGA-TTAACAAAGCAATGCTAATT-TAATAACGTAAACATAC-TTCTGCGATT--ATTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........GGTCAAGGAATGCTGCTGTGCTGAG..........................................................................................................................................................................................................................................................................................................................................................................................2520.50100000010000
............................GCTGAGATCTGGATCAAGA.............................................................................................................................................................................................................................................................................................................................................................................1920.50101000000000
..............AGGAATGCTGCTGTGCTGAGAT........................................................................................................................................................................................................................................................................................................................................................................................2220.50100000010000
....................GCTGCTGTGCTGAGATCTG.....................................................................................................................................................................................................................................................................................................................................................................................1920.50101000000000
droEre2
ATTCGTGCAGGTCAAGGAATGCTGCTGTGCTGAGATCTGGATCAAGAAGTGTAAGTAGTAGA-----------TCCACC----------------------------------------------------AGATCCACAAATGCCAACTCCTCTGGCACTCGGGGC------------ACC------ATCGCATCTGGAAGCCCAATGGC---C-------------------------------------------------------------------GTGCTAAAT------GCCCATG--------------CCACTC-------ACACAC----GAG------AAGGGA-TTAACAAAGCAATGCTAATT-TAATAACGTAAACATAC-TTCTGCAATT--ATTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................GCTGAGATCTGGATCAAGAAGTGGC.......................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
..............................................................................................................................................TGCCAACTCCTCTGGCACTCGGGGC------------ACC------................................................................................................................................................................................................................................2811.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................AATAACGTAAACATAC-TTCTG...........2111.0011000000
..........GTCAAGGAATGCTGCTGTGCTGA...........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
..................................................................................................................................................................................................TCTGGAAGCCCAATGGC---C-------------------------------------------------------------------GTGCTAAA..........................................................................................................................2611.0011000000
......................................................................................................................................................................................................................C-------------------------------------------------------------------GTGCTAAAT------GCCCATG--------------CCAC..........................................................................................2111.0011000000
..........GTCAAGGAATGCTGCTGTGCTGAGA.........................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
..................................................GTAAGTAGTAGA-----------TCCACC----------------------------------------------------AG.......................................................................................................................................................................................................................................................................................2011.0010000010
.................................GATCTGGATCAAGAAGTGGC.......................................................................................................................................................................................................................................................................................................................................................................2020.5010000100

Generated: 05/18/2015 at 06:38 AM